F362127

General Info

Members Datasets Scaffolds Average Seq Length
251 150 250 371

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10000719|Ga0070658_1000071916
Length 426
Sequence MTYQQPVRCMTDKVLQLARRRGEDVDSIFILSSICRKDIFMLKDLTGASKGYLFTSESVCAGHPDKICAVDPHARTGVETVAGANRIALFGEIKTTAKLNFEQIARDKVRQLGYTEPAWGFGAESEFSSDLHLQSPDIALGVDQDGAGDQGMMFGYACDETPELMPLPITLAHALARRIDEARERGELPWLRPDGKAQVTVRYEHGKPVGVEKVVAAVAHSEAVPASQVRAETITAVIGPVLARYRFNLPADENIVINGTGLWHIPGPESDAGLTGRKIVVDTYGGYARVGGGAFSGKDPSKVDRSGAYAARYIAKNIVAAGLATKCEVGLAYVIGQPEPLMQTIETFGTAVVDETTLHAFKDSLIDTSVRGIIETLDLRRPIYSQTSAYGHFGKPDLPWEQIVARQHQPMSRRRKPSNATASEMA

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
49 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
83 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
90 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
91 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
101 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
102 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
105 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
106 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
107 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
118 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
119 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
120 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
121 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
122 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
123 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
124 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
125 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
128 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
129 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
130 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
131 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
132 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
133 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
134 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
135 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
136 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
137 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
138 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
139 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
140 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
141 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
142 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
143 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
144 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
145 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
146 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
147 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
148 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
149 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
150 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.1
Nodule 0
Rhizoplane 1.2
Rhizosphere 72.11
Stem 0
Stem Tuber 0
Unclassified 1.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1001897 3300001915 Bacteria 5663
2 JGI24737J22298_10000038 3300001990 Bacteria 37913
3 JGI24735J21928_10000128 3300002067 Bacteria 27513
4 JGI24742J22300_10000024 3300002244 Bacteria 25383
5 Ga0070658_10000015 3300005327 Bacteria 230579
6 Ga0070658_10000719 3300005327 Bacteria 28681
7 Ga0070658_10002374 3300005327 Bacteria 15804
8 Ga0070658_10006028 3300005327 Bacteria 9837
9 Ga0070658_10019876 3300005327 Bacteria 5380
10 Ga0070676_10002400 3300005328 Bacteria 9596
11 Ga0070683_100000224 3300005329 Bacteria 38656
12 Ga0070683_100023016 3300005329 Bacteria 5571
13 Ga0070690_100003589 3300005330 Bacteria 8524
14 Ga0068869_100044595 3300005334 Bacteria 3189
15 Ga0070680_100012977 3300005336 Bacteria 6481
16 Ga0070682_100004074 3300005337 Bacteria 8118
17 Ga0070660_100000621 3300005339 Bacteria 23672
18 Ga0070660_100001835 3300005339 Bacteria 14585
19 Ga0070660_100004067 3300005339 Bacteria 10092
20 Ga0070691_10004985 3300005341 Bacteria 6041
21 Ga0070671_100000001 3300005355 Bacteria 1228151
22 Ga0070674_100000829 3300005356 Bacteria 15965
23 Ga0070659_100000522 3300005366 Bacteria 28211
24 Ga0070659_100074798 3300005366 Bacteria 2699
25 Ga0070667_100000001 3300005367 Bacteria 1108638
26 Ga0070667_100001621 3300005367 Bacteria 20155
27 Ga0070714_100000374 3300005435 Bacteria 33426
28 Ga0070681_10003592 3300005458 Bacteria 14539
29 Ga0070681_10009995 3300005458 Bacteria 9357
30 Ga0070685_10029788 3300005466 Bacteria 3035
31 Ga0070679_100001931 3300005530 Bacteria 18623
32 Ga0070679_100003271 3300005530 Bacteria 14812
33 Ga0070679_100072416 3300005530 Bacteria 3438
34 Ga0070679_100167224 3300005530 Bacteria 2172
35 Ga0070684_100000049 3300005535 Bacteria 79768
36 Ga0070684_100055641 3300005535 Bacteria 3450
37 Ga0070686_100002598 3300005544 Bacteria 9962
38 Ga0070665_100011600 3300005548 Bacteria 8909
39 Ga0070665_100114595 3300005548 Bacteria 2698
40 Ga0068855_100000003 3300005563 Bacteria 589862
41 Ga0068855_100000211 3300005563 Bacteria 74558
42 Ga0068855_100013363 3300005563 Bacteria 9903
43 Ga0068855_100125798 3300005563 Bacteria 2931
44 Ga0068857_100000002 3300005577 Bacteria 241401
45 Ga0068857_100053178 3300005577 Bacteria 3593
46 Ga0068857_100122831 3300005577 Bacteria 2339
47 Ga0068856_100000001 3300005614 Bacteria 565602
48 Ga0068856_100003317 3300005614 Bacteria 16350
49 Ga0068856_100013032 3300005614 Bacteria 8051
50 Ga0068859_100040225 3300005617 Bacteria 4693
51 Ga0068863_100106115 3300005841 Bacteria 2672
52 Ga0068860_100004620 3300005843 Bacteria 14061
53 Ga0075365_10000002 3300006038 Bacteria 226306
54 Ga0075365_10000325 3300006038 Bacteria 16900
55 Ga0075365_10009537 3300006038 Bacteria 5590
56 Ga0075364_10001631 3300006051 Bacteria 12291
57 Ga0075364_10011478 3300006051 Bacteria 5381
58 Ga0075364_10019280 3300006051 Bacteria 4280
59 Ga0075364_10077096 3300006051 Bacteria 2200
60 Ga0075362_10023569 3300006177 Bacteria 2605
61 Ga0075367_10000245 3300006178 Bacteria 18388
62 Ga0075367_10078829 3300006178 Bacteria 1990
63 Ga0075367_10158460 3300006178 Bacteria 1407
64 Ga0075369_10000009 3300006186 Bacteria 79582
65 Ga0075366_10000217 3300006195 Bacteria 25353
66 Ga0075366_10002658 3300006195 Bacteria 9213
67 Ga0075366_10013699 3300006195 Bacteria 4622
68 Ga0097621_100000009 3300006237 Bacteria 114089
69 Ga0075370_10055455 3300006353 Bacteria 2252
70 Ga0075430_100046173 3300006846 Bacteria 3679
71 Ga0097620_100040225 3300006931 Bacteria 4693
72 Ga0105240_10023843 3300009093 Bacteria 8081
73 Ga0105240_10084605 3300009093 Bacteria 3889
74 Ga0111539_10003367 3300009094 Bacteria 21089
75 Ga0105245_10000001 3300009098 Bacteria 939270
76 Ga0105245_10000002 3300009098 Bacteria 634374
77 Ga0105245_10043260 3300009098 Bacteria 4018
78 Ga0105245_10076264 3300009098 Bacteria 3054
79 Ga0105241_10000003 3300009174 Bacteria 839043
80 Ga0105242_10015156 3300009176 Bacteria 5985
81 Ga0105248_10270137 3300009177 Bacteria 1915
82 Ga0105249_10012371 3300009553 Bacteria 7521
83 Ga0105030_100657 3300009987 Bacteria 3053
84 Ga0105028_101197 3300009993 Bacteria 2735
85 Ga0105246_10003010 3300011119 Bacteria 10222
86 Ga0157373_10000741 3300013100 Bacteria 25314
87 Ga0157373_10025129 3300013100 Bacteria 4312
88 Ga0157370_10083250 3300013104 Bacteria 3008
89 Ga0157369_10000261 3300013105 Bacteria 71207
90 Ga0157369_10044631 3300013105 Bacteria 4823
91 Ga0157369_10238798 3300013105 Bacteria 1898
92 Ga0157374_10000073 3300013296 Bacteria 100517
93 Ga0157374_10000331 3300013296 Bacteria 43602
94 Ga0157372_10006452 3300013307 Bacteria 12492
95 Ga0157377_10030045 3300014745 Bacteria 2940
96 Ga0157376_10000001 3300014969 Bacteria 842910
97 Ga0207680_10042078 3300025903 Bacteria 2670
98 Ga0207647_10000879 3300025904 Bacteria 23320
99 Ga0207645_10004556 3300025907 Bacteria 10236
100 Ga0207705_10000011 3300025909 Bacteria 517768
101 Ga0207705_10000327 3300025909 Bacteria 43259
102 Ga0207705_10005001 3300025909 Bacteria 9947
103 Ga0207705_10012387 3300025909 Bacteria 6162
104 Ga0207654_10000002 3300025911 Bacteria 1460142
105 Ga0207660_10036451 3300025917 Bacteria 3419
106 Ga0207657_10001704 3300025919 Bacteria 23699
107 Ga0207657_10011817 3300025919 Bacteria 8645
108 Ga0207657_10072700 3300025919 Bacteria 2908
109 Ga0207652_10001593 3300025921 Bacteria 19985
110 Ga0207652_10002441 3300025921 Bacteria 15700
111 Ga0207652_10025717 3300025921 Bacteria 4897
112 Ga0207652_10032992 3300025921 Bacteria 4359
113 Ga0207687_10000001 3300025927 Bacteria 1130810
114 Ga0207687_10000004 3300025927 Bacteria 841177
115 Ga0207687_10027648 3300025927 Bacteria 3808
116 Ga0207664_10000269 3300025929 Bacteria 39220
117 Ga0207644_10000001 3300025931 Bacteria 1243214
118 Ga0207690_10000425 3300025932 Bacteria 27496
119 Ga0207669_10001334 3300025937 Bacteria 10505
120 Ga0207689_10120020 3300025942 Bacteria 2163
121 Ga0207661_10000021 3300025944 Bacteria 205381
122 Ga0207661_10023223 3300025944 Bacteria 4684
123 Ga0207667_10000008 3300025949 Bacteria 625138
124 Ga0207667_10001023 3300025949 Bacteria 35605
125 Ga0207667_10024494 3300025949 Bacteria 6625
126 Ga0207667_10092108 3300025949 Bacteria 3131
127 Ga0207667_10167185 3300025949 Bacteria 2261
128 Ga0207712_10005453 3300025961 Bacteria 8031
129 Ga0207658_10000003 3300025986 Bacteria 1151934
130 Ga0207658_10014815 3300025986 Bacteria 5343
131 Ga0207702_10000001 3300026078 Bacteria 895738
132 Ga0207702_10011639 3300026078 Bacteria 7329
133 Ga0207641_10026014 3300026088 Bacteria 4828
134 Ga0207674_10000001 3300026116 Bacteria 616581
135 Ga0207674_10255539 3300026116 Bacteria 1699
136 Ga0209813_10005156 3300027866 Bacteria 3158
137 Ga0268266_10018172 3300028379 Bacteria 5994
138 Ga0268264_10036815 3300028381 Bacteria 4033
139 Ga0265326_10004317 3300028558 Bacteria 4562
140 Ga0265334_10000326 3300028573 Bacteria 25928
141 Ga0265334_10057248 3300028573 Bacteria 1478
142 Ga0265338_10000003 3300028800 Bacteria 733923
143 Ga0265338_10000052 3300028800 Bacteria 209239
144 Ga0265338_10002081 3300028800 Bacteria 30881
145 Ga0265338_10014678 3300028800 Bacteria 8683
146 Ga0265338_10057070 3300028800 Bacteria 3457
147 Ga0265338_10062684 3300028800 Bacteria 3248
148 Ga0265338_10078109 3300028800 Unclassified 2794
149 Ga0265338_10090590 3300028800 Bacteria 2531
150 Ga0265338_10126533 3300028800 Bacteria 2026
151 Ga0265338_10167945 3300028800 Bacteria 1687
152 Ga0265320_10018158 3300031240 Bacteria 3881
153 Ga0265340_10000015 3300031247 Bacteria 102635
154 Ga0265339_10022880 3300031249 Unclassified 3615
155 Ga0265327_10000017 3300031251 Bacteria 445264
156 Ga0265327_10002722 3300031251 Bacteria 18062
157 Ga0265313_10032604 3300031595 Unclassified 2657
158 Ga0265313_10033180 3300031595 Unclassified 2627
159 Ga0265342_10005152 3300031712 Bacteria 10062
160 Ga0395899_0029961 3300037312 Bacteria 4095
161 Ga0395900_0001211 3300037418 Bacteria 31948
162 Ga0395900_0027664 3300037418 Bacteria 5809
163 Ga0395900_0054084 3300037418 Bacteria 4133
164 Ga0395900_0146655 3300037418 Bacteria 2413
165 Ga0395898_0002945 3300037466 Bacteria 19369
166 Ga0395898_0006489 3300037466 Bacteria 12495
167 Ga0395905_0028957 3300037471 Bacteria 5220
168 Ga0395905_0163593 3300037471 Bacteria 2091
169 Ga0395901_0002079 3300038443 Bacteria 20533
170 Ga0395901_0006397 3300038443 Bacteria 11932
171 Ga0395901_0018451 3300038443 Bacteria 7122
172 Ga0395901_0022146 3300038443 Bacteria 6511
173 Ga0451793_0902649 3300041452 Bacteria 1557
174 Ga0451577_0000004 3300042876 Bacteria 816743
175 Ga0451577_0007169 3300042876 Bacteria 10995
176 Ga0453684_0000009 3300044712 Bacteria 1139914
177 Ga0453684_0000025 3300044712 Bacteria 818638
178 Ga0453684_0002321 3300044712 Bacteria 46706
179 Ga0453684_0008102 3300044712 Bacteria 18989
180 Ga0453684_0027363 3300044712 Bacteria 8181
181 Ga0451576_0021882 3300045051 Bacteria 6943
182 Ga0451576_0062179 3300045051 Bacteria 3893
183 Ga0495649_0000843 3300046694 Bacteria 24617
184 Ga0495672_0000129 3300047320 Bacteria 112879
185 Ga0496108_0327843 3300048911 Bacteria 1335
186 Ga0496112_0022264 3300048915 Bacteria 6037
187 Ga0496117_0084958 3300048920 Bacteria 2063
188 Ga0496118_0042041 3300048921 Bacteria 3611
189 Ga0496120_0085107 3300048923 Bacteria 1703
190 Ga0496126_0054605 3300048929 Bacteria 3617
191 Ga0501033_0195532 3300049570 Bacteria 1446
192 Ga0501033_0212210 3300049570 Bacteria 1380
193 Ga0501034_0003944 3300049571 Bacteria 16672
194 Ga0501037_0074589 3300049573 Bacteria 2465
195 Ga0501047_0000397 3300049581 Bacteria 48886
196 Ga0501048_0022667 3300049582 Bacteria 4591
197 Ga0501070_0180377 3300049586 Bacteria 1738
198 Ga0501080_0079766 3300049742 Bacteria 3043
199 Ga0501083_0025644 3300049744 Bacteria 4081
200 Ga0501083_0067181 3300049744 Bacteria 2387
201 Ga0501035_0000033 3300049822 Bacteria 175087
202 Ga0501044_0095899 3300049823 Bacteria 2989
203 nmdc:mga03683_10187_c1 3300050489 Bacteria 3366
204 nmdc:mga03683_47688_c1 3300050489 Bacteria 1778
205 nmdc:mga00v17_29128_c1 3300050491 Bacteria 3239
206 nmdc:mga00v17_35234_c1 3300050491 Bacteria 2977
207 nmdc:mga00v17_81740_c1 3300050491 Bacteria 2018
208 nmdc:mga00v17_83_c1 3300050491 Bacteria 42177
209 nmdc:mga0yw44_1055_c1 3300050492 Bacteria 10599
210 nmdc:mga0yw44_319_c1 3300050492 Bacteria 16760
211 nmdc:mga0yw44_3_c1 3300050492 Bacteria 561857
212 nmdc:mga0k408_1304_c1 3300050493 Bacteria 13496
213 nmdc:mga0k408_154_c2 3300050493 Bacteria 25786
214 nmdc:mga0k408_214_c1 3300050493 Bacteria 31125
215 nmdc:mga06z11_135_c1 3300050494 Bacteria 29576
216 nmdc:mga06z11_58610_c1 3300050494 Bacteria 1998
217 nmdc:mga04h51_4248_c1 3300050495 Bacteria 3545
218 nmdc:mga07m45_82589_c1 3300050496 Bacteria 1835
219 nmdc:mga0qj67_10558_c1 3300050509 Bacteria 6898
220 nmdc:mga08y16_1620_c2 3300050511 Bacteria 22070
221 nmdc:mga0sz30_1_c1 3300050516 Bacteria 796501
222 Ga0500610_0000006 3300053079 Bacteria 134304
223 Ga0500610_0028050 3300053079 Bacteria 2833
224 Ga0500643_000043 3300053087 Bacteria 157905
225 Ga0500643_011914 3300053087 Bacteria 3141
226 Ga0500644_0000006 3300053088 Bacteria 143304
227 Ga0500644_0001047 3300053088 Bacteria 8252
228 Ga0500646_0002033 3300053090 Bacteria 5278
229 Ga0500583_0000220 3300053092 Bacteria 21254
230 Ga0500651_0142085 3300053093 Bacteria 1446
231 Ga0500650_0000001 3300053098 Bacteria 818797
232 Ga0500555_000001 3300053103 Bacteria 1353713
233 Ga0500555_000002 3300053103 Bacteria 1314346
234 Ga0500556_0000272 3300053104 Bacteria 40585
235 Ga0500562_000002 3300053108 Bacteria 977234
236 Ga0500594_0000001 3300053118 Bacteria 1178472
237 Ga0500594_0000234 3300053118 Bacteria 13408
238 Ga0500628_000015 3300053129 Bacteria 101037
239 Ga0500642_0000430 3300053130 Bacteria 13701
240 Ga0500652_000020 3300053131 Bacteria 119198
241 Ga0500655_004721 3300053133 Bacteria 2449
242 Ga0500561_0000001 3300053137 Bacteria 957685
243 Ga0500568_0008461 3300053139 Bacteria 4953
244 Ga0500577_0014225 3300053142 Bacteria 2454
245 Ga0500579_003925 3300053143 Bacteria 9023
246 Ga0500588_0045818 3300053146 Bacteria 1341
247 Ga0500589_000044 3300053147 Bacteria 28820
248 Ga0500589_054414 3300053147 Unclassified 1850
249 Ga0500570_000005 3300053724 Bacteria 132994
250 Ga0500611_000125 3300053727 Bacteria 15446

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009993 Ga0105028_101197 Ga0105028_1011972 314
2 3300031251 Ga0265327_10002722 Ga0265327_100027225 333
3 3300005614 Ga0068856_100000001 Ga0068856_100000001165 344
4 3300026078 Ga0207702_10000001 Ga0207702_10000001714 344
5 3300044712 Ga0453684_0002321 Ga0453684_0002321_44771_45877 347
6 3300050496 nmdc:mga07m45_82589_c1 nmdc:mga07m45_82589_c1_734_1789 348
7 3300048920 Ga0496117_0084958 Ga0496117_0084958_270_1391 349
8 3300048921 Ga0496118_0042041 Ga0496118_0042041_104_1225 349
9 3300005614 Ga0068856_100003317 Ga0068856_10000331712 350
10 3300026116 Ga0207674_10255539 Ga0207674_102555391 352
11 3300048923 Ga0496120_0085107 Ga0496120_0085107_288_1454 352
12 3300042876 Ga0451577_0000004 Ga0451577_0000004_625538_626632 353
13 3300044712 Ga0453684_0000025 Ga0453684_0000025_625566_626660 353
14 3300005530 Ga0070679_100167224 Ga0070679_1001672242 354
15 3300025921 Ga0207652_10032992 Ga0207652_100329924 354
16 3300005577 Ga0068857_100000002 Ga0068857_100000002103 355
17 3300038443 Ga0395901_0002079 Ga0395901_0002079_12136_13290 355
18 3300005339 Ga0070660_100001835 Ga0070660_1000018353 356
19 3300005458 Ga0070681_10003592 Ga0070681_100035921 356
20 3300006237 Ga0097621_100000009 Ga0097621_10000000976 356
21 3300009098 Ga0105245_10000002 Ga0105245_1000000244 356
22 3300013296 Ga0157374_10000073 Ga0157374_1000007358 356
23 3300025919 Ga0207657_10072700 Ga0207657_100727004 356
24 3300025927 Ga0207687_10000001 Ga0207687_100000011166 356
25 3300005577 Ga0068857_100122831 Ga0068857_1001228313 357
26 3300009987 Ga0105030_100657 Ga0105030_1006573 357
27 3300028800 Ga0265338_10002081 Ga0265338_1000208115 357
28 3300028800 Ga0265338_10126533 Ga0265338_101265331 357
29 3300037471 Ga0395905_0163593 Ga0395905_0163593_624_1730 357
30 3300044712 Ga0453684_0008102 Ga0453684_0008102_13998_15113 357
31 3300045051 Ga0451576_0021882 Ga0451576_0021882_3814_4920 357
32 3300049573 Ga0501037_0074589 Ga0501037_0074589_1090_2205 357
33 3300005337 Ga0070682_100004074 Ga0070682_1000040748 358
34 3300005458 Ga0070681_10009995 Ga0070681_100099954 358
35 3300005530 Ga0070679_100072416 Ga0070679_1000724164 358
36 3300005563 Ga0068855_100125798 Ga0068855_1001257983 358
37 3300005617 Ga0068859_100040225 Ga0068859_1000402256 358
38 3300006178 Ga0075367_10078829 Ga0075367_100788292 358
39 3300006353 Ga0075370_10055455 Ga0075370_100554553 358
40 3300006931 Ga0097620_100040225 Ga0097620_1000402256 358
41 3300009093 Ga0105240_10023843 Ga0105240_100238434 358
42 3300009177 Ga0105248_10270137 Ga0105248_102701372 358
43 3300014745 Ga0157377_10030045 Ga0157377_100300452 358
44 3300028573 Ga0265334_10057248 Ga0265334_100572481 358
45 3300028800 Ga0265338_10078109 Ga0265338_100781092 358
46 3300028800 Ga0265338_10090590 Ga0265338_100905902 358
47 3300028800 Ga0265338_10167945 Ga0265338_101679452 358
48 3300031240 Ga0265320_10018158 Ga0265320_100181583 358
49 3300031247 Ga0265340_10000015 Ga0265340_1000001548 358
50 3300031249 Ga0265339_10022880 Ga0265339_100228806 358
51 3300031712 Ga0265342_10005152 Ga0265342_1000515217 358
52 3300037418 Ga0395900_0001211 Ga0395900_0001211_17955_19064 358
53 3300037466 Ga0395898_0006489 Ga0395898_0006489_10498_11607 358
54 3300038443 Ga0395901_0018451 Ga0395901_0018451_3960_5069 358
55 3300042876 Ga0451577_0007169 Ga0451577_0007169_1748_2881 358
56 3300044712 Ga0453684_0000009 Ga0453684_0000009_1128627_1129760 358
57 3300044712 Ga0453684_0027363 Ga0453684_0027363_401_1516 358
58 3300050494 nmdc:mga06z11_58610_c1 nmdc:mga06z11_58610_c1_617_1777 358
59 3300005327 Ga0070658_10000015 Ga0070658_10000015144 359
60 3300005563 Ga0068855_100013363 Ga0068855_1000133638 359
61 3300006038 Ga0075365_10000325 Ga0075365_100003258 359
62 3300006051 Ga0075364_10001631 Ga0075364_1000163111 359
63 3300009093 Ga0105240_10084605 Ga0105240_100846053 359
64 3300013105 Ga0157369_10238798 Ga0157369_102387982 359
65 3300025909 Ga0207705_10000011 Ga0207705_10000011202 359
66 3300025921 Ga0207652_10002441 Ga0207652_100024415 359
67 3300025949 Ga0207667_10024494 Ga0207667_100244946 359
68 3300037466 Ga0395898_0002945 Ga0395898_0002945_14404_15519 359
69 3300045051 Ga0451576_0062179 Ga0451576_0062179_554_1666 359
70 3300049744 Ga0501083_0025644 Ga0501083_0025644_1326_2462 359
71 3300050489 nmdc:mga03683_47688_c1 nmdc:mga03683_47688_c1_309_1430 359
72 3300050491 nmdc:mga00v17_83_c1 nmdc:mga00v17_83_c1_35886_37025 359
73 3300050492 nmdc:mga0yw44_319_c1 nmdc:mga0yw44_319_c1_4914_6053 359
74 3300053090 Ga0500646_0002033 Ga0500646_0002033_2451_3632 359
75 3300053093 Ga0500651_0142085 Ga0500651_0142085_105_1286 359
76 3300053098 Ga0500650_0000001 Ga0500650_0000001_368417_369598 359
77 3300053104 Ga0500556_0000272 Ga0500556_0000272_12061_13179 359
78 3300053118 Ga0500594_0000001 Ga0500594_0000001_1029493_1030674 359
79 3300053133 Ga0500655_004721 Ga0500655_004721_618_1799 359
80 3300053143 Ga0500579_003925 Ga0500579_003925_2215_3396 359
81 3300005327 Ga0070658_10006028 Ga0070658_100060286 360
82 3300005336 Ga0070680_100012977 Ga0070680_1000129773 360
83 3300005339 Ga0070660_100004067 Ga0070660_1000040672 360
84 3300005366 Ga0070659_100074798 Ga0070659_1000747981 360
85 3300005530 Ga0070679_100001931 Ga0070679_10000193124 360
86 3300006038 Ga0075365_10000002 Ga0075365_10000002111 360
87 3300006051 Ga0075364_10011478 Ga0075364_100114781 360
88 3300006051 Ga0075364_10077096 Ga0075364_100770962 360
89 3300006177 Ga0075362_10023569 Ga0075362_100235693 360
90 3300009098 Ga0105245_10000001 Ga0105245_10000001448 360
91 3300009098 Ga0105245_10076264 Ga0105245_100762642 360
92 3300011119 Ga0105246_10003010 Ga0105246_100030106 360
93 3300013296 Ga0157374_10000331 Ga0157374_1000033128 360
94 3300013307 Ga0157372_10006452 Ga0157372_1000645211 360
95 3300014969 Ga0157376_10000001 Ga0157376_10000001277 360
96 3300025909 Ga0207705_10012387 Ga0207705_100123874 360
97 3300025917 Ga0207660_10036451 Ga0207660_100364514 360
98 3300025919 Ga0207657_10011817 Ga0207657_1001181710 360
99 3300025921 Ga0207652_10001593 Ga0207652_1000159318 360
100 3300025927 Ga0207687_10000001 Ga0207687_1000000110 360
101 3300025927 Ga0207687_10000004 Ga0207687_10000004823 360
102 3300025927 Ga0207687_10027648 Ga0207687_100276484 360
103 3300025949 Ga0207667_10092108 Ga0207667_100921082 360
104 3300025949 Ga0207667_10167185 Ga0207667_101671852 360
105 3300031595 Ga0265313_10033180 Ga0265313_100331802 360
106 3300050489 nmdc:mga03683_10187_c1 nmdc:mga03683_10187_c1_1503_2615 360
107 3300050491 nmdc:mga00v17_35234_c1 nmdc:mga00v17_35234_c1_1629_2756 360
108 3300050492 nmdc:mga0yw44_3_c1 nmdc:mga0yw44_3_c1_294683_295813 360
109 3300005334 Ga0068869_100044595 Ga0068869_1000445953 361
110 3300005841 Ga0068863_100106115 Ga0068863_1001061152 361
111 3300006178 Ga0075367_10158460 Ga0075367_101584601 361
112 3300009094 Ga0111539_10003367 Ga0111539_1000336725 361
113 3300025942 Ga0207689_10120020 Ga0207689_101200202 361
114 3300026088 Ga0207641_10026014 Ga0207641_100260143 361
115 3300031251 Ga0265327_10000017 Ga0265327_1000001786 361
116 3300037418 Ga0395900_0146655 Ga0395900_0146655_401_1525 361
117 3300038443 Ga0395901_0022146 Ga0395901_0022146_2762_3886 361
118 3300048911 Ga0496108_0327843 Ga0496108_0327843_134_1255 361
119 3300050511 nmdc:mga08y16_1620_c2 nmdc:mga08y16_1620_c2_2543_3658 361
120 3300053146 Ga0500588_0045818 Ga0500588_0045818_167_1291 361
121 3300005327 Ga0070658_10002374 Ga0070658_1000237414 362
122 3300005330 Ga0070690_100003589 Ga0070690_1000035892 362
123 3300005355 Ga0070671_100000001 Ga0070671_100000001576 362
124 3300005367 Ga0070667_100000001 Ga0070667_100000001678 362
125 3300005435 Ga0070714_100000374 Ga0070714_1000003745 362
126 3300005544 Ga0070686_100002598 Ga0070686_1000025989 362
127 3300005843 Ga0068860_100004620 Ga0068860_10000462014 362
128 3300025909 Ga0207705_10000327 Ga0207705_100003273 362
129 3300025929 Ga0207664_10000269 Ga0207664_100002695 362
130 3300025931 Ga0207644_10000001 Ga0207644_10000001859 362
131 3300025986 Ga0207658_10000003 Ga0207658_10000003702 362
132 3300028381 Ga0268264_10036815 Ga0268264_100368152 362
133 3300028800 Ga0265338_10057070 Ga0265338_100570705 362
134 3300048915 Ga0496112_0022264 Ga0496112_0022264_4346_5467 362
135 3300049744 Ga0501083_0067181 Ga0501083_0067181_926_2065 362
136 3300053724 Ga0500570_000005 Ga0500570_000005_129734_130852 362
137 3300005548 Ga0070665_100114595 Ga0070665_1001145952 363
138 3300006846 Ga0075430_100046173 Ga0075430_1000461732 363
139 3300013100 Ga0157373_10025129 Ga0157373_100251291 363
140 3300025903 Ga0207680_10042078 Ga0207680_100420782 363
141 3300028800 Ga0265338_10000052 Ga0265338_10000052199 363
142 3300028800 Ga0265338_10014678 Ga0265338_100146787 363
143 3300053079 Ga0500610_0000006 Ga0500610_0000006_122388_123512 363
144 3300053087 Ga0500643_011914 Ga0500643_011914_247_1371 363
145 3300053088 Ga0500644_0000006 Ga0500644_0000006_43376_44500 363
146 3300053103 Ga0500555_000002 Ga0500555_000002_614722_615846 363
147 3300053131 Ga0500652_000020 Ga0500652_000020_102783_103907 363
148 3300005329 Ga0070683_100000224 Ga0070683_10000022420 364
149 3300005356 Ga0070674_100000829 Ga0070674_10000082911 364
150 3300005466 Ga0070685_10029788 Ga0070685_100297883 364
151 3300005535 Ga0070684_100000049 Ga0070684_10000004976 364
152 3300005548 Ga0070665_100011600 Ga0070665_1000116002 364
153 3300009553 Ga0105249_10012371 Ga0105249_100123717 364
154 3300013105 Ga0157369_10044631 Ga0157369_100446315 364
155 3300025937 Ga0207669_10001334 Ga0207669_100013349 364
156 3300025944 Ga0207661_10000021 Ga0207661_1000002118 364
157 3300025961 Ga0207712_10005453 Ga0207712_100054538 364
158 3300028379 Ga0268266_10018172 Ga0268266_100181726 364
159 3300028558 Ga0265326_10004317 Ga0265326_100043172 364
160 3300028573 Ga0265334_10000326 Ga0265334_100003265 364
161 3300028800 Ga0265338_10000003 Ga0265338_10000003414 364
162 3300031595 Ga0265313_10032604 Ga0265313_100326041 364
163 3300037312 Ga0395899_0029961 Ga0395899_0029961_1909_3051 364
164 3300037418 Ga0395900_0027664 Ga0395900_0027664_3684_4835 364
165 3300037471 Ga0395905_0028957 Ga0395905_0028957_128_1270 364
166 3300038443 Ga0395901_0006397 Ga0395901_0006397_9568_10710 364
167 3300050491 nmdc:mga00v17_81740_c1 nmdc:mga00v17_81740_c1_418_1554 364
168 3300053087 Ga0500643_000043 Ga0500643_000043_108035_109162 364
169 3300053103 Ga0500555_000001 Ga0500555_000001_631846_632976 364
170 3300053139 Ga0500568_0008461 Ga0500568_0008461_955_2082 364
171 3300005327 Ga0070658_10000719 Ga0070658_1000071916 365
172 3300005339 Ga0070660_100000621 Ga0070660_10000062120 365
173 3300005341 Ga0070691_10004985 Ga0070691_100049857 365
174 3300005366 Ga0070659_100000522 Ga0070659_10000052211 365
175 3300005530 Ga0070679_100003271 Ga0070679_1000032716 365
176 3300005563 Ga0068855_100000211 Ga0068855_10000021172 365
177 3300006038 Ga0075365_10009537 Ga0075365_100095372 365
178 3300006051 Ga0075364_10019280 Ga0075364_100192805 365
179 3300025904 Ga0207647_10000879 Ga0207647_1000087923 365
180 3300025909 Ga0207705_10005001 Ga0207705_100050013 365
181 3300025919 Ga0207657_10001704 Ga0207657_1000170418 365
182 3300025921 Ga0207652_10025717 Ga0207652_100257176 365
183 3300025932 Ga0207690_10000425 Ga0207690_1000042515 365
184 3300025949 Ga0207667_10001023 Ga0207667_1000102313 365
185 3300026116 Ga0207674_10000001 Ga0207674_10000001525 365
186 3300028800 Ga0265338_10062684 Ga0265338_100626843 365
187 3300046694 Ga0495649_0000843 Ga0495649_0000843_18969_20099 365
188 3300048929 Ga0496126_0054605 Ga0496126_0054605_893_2020 365
189 3300050491 nmdc:mga00v17_29128_c1 nmdc:mga00v17_29128_c1_945_2138 365
190 3300050492 nmdc:mga0yw44_1055_c1 nmdc:mga0yw44_1055_c1_3173_4300 365
191 3300053088 Ga0500644_0001047 Ga0500644_0001047_62_1195 365
192 3300053108 Ga0500562_000002 Ga0500562_000002_798272_799423 365
193 3300053142 Ga0500577_0014225 Ga0500577_0014225_93_1226 365
194 3300053727 Ga0500611_000125 Ga0500611_000125_11679_12812 365
195 3300009098 Ga0105245_10043260 Ga0105245_100432604 366
196 3300009176 Ga0105242_10015156 Ga0105242_100151566 366
197 3300006195 Ga0075366_10002658 Ga0075366_100026588 369
198 3300037418 Ga0395900_0054084 Ga0395900_0054084_72_1238 369
199 3300049570 Ga0501033_0212210 Ga0501033_0212210_76_1236 369
200 3300050493 nmdc:mga0k408_154_c2 nmdc:mga0k408_154_c2_19229_20413 369
201 3300053118 Ga0500594_0000234 Ga0500594_0000234_9258_10403 370
202 3300053129 Ga0500628_000015 Ga0500628_000015_69255_70400 370
203 3300005367 Ga0070667_100001621 Ga0070667_10000162114 371
204 3300025986 Ga0207658_10014815 Ga0207658_100148154 371
205 3300053147 Ga0500589_054414 Ga0500589_054414_524_1669 371
206 3300047320 Ga0495672_0000129 Ga0495672_0000129_83378_84541 372
207 3300049570 Ga0501033_0195532 Ga0501033_0195532_110_1273 372
208 3300049571 Ga0501034_0003944 Ga0501034_0003944_206_1369 372
209 3300049581 Ga0501047_0000397 Ga0501047_0000397_4649_5812 372
210 3300049582 Ga0501048_0022667 Ga0501048_0022667_2806_3969 372
211 3300049586 Ga0501070_0180377 Ga0501070_0180377_540_1703 372
212 3300049822 Ga0501035_0000033 Ga0501035_0000033_53763_54926 372
213 3300049823 Ga0501044_0095899 Ga0501044_0095899_73_1236 372
214 3300041452 Ga0451793_0902649 Ga0451793_0902649_125_1366 373
215 3300005327 Ga0070658_10019876 Ga0070658_100198765 374
216 3300005577 Ga0068857_100053178 Ga0068857_1000531783 374
217 3300013104 Ga0157370_10083250 Ga0157370_100832503 374
218 3300053079 Ga0500610_0028050 Ga0500610_0028050_111_1295 374
219 3300053092 Ga0500583_0000220 Ga0500583_0000220_5192_6376 374
220 3300053130 Ga0500642_0000430 Ga0500642_0000430_7232_8416 374
221 3300053147 Ga0500589_000044 Ga0500589_000044_7704_8888 374
222 3300001990 JGI24737J22298_10000038 JGI24737J22298_1000003826 375
223 3300002067 JGI24735J21928_10000128 JGI24735J21928_1000012828 375
224 3300005329 Ga0070683_100023016 Ga0070683_1000230166 375
225 3300005535 Ga0070684_100055641 Ga0070684_1000556411 375
226 3300005563 Ga0068855_100000003 Ga0068855_10000000319 375
227 3300005614 Ga0068856_100013032 Ga0068856_1000130322 375
228 3300006195 Ga0075366_10000217 Ga0075366_1000021712 375
229 3300009174 Ga0105241_10000003 Ga0105241_10000003283 375
230 3300013100 Ga0157373_10000741 Ga0157373_100007414 375
231 3300013105 Ga0157369_10000261 Ga0157369_1000026118 375
232 3300025911 Ga0207654_10000002 Ga0207654_10000002925 375
233 3300025944 Ga0207661_10023223 Ga0207661_100232232 375
234 3300025949 Ga0207667_10000008 Ga0207667_1000000818 375
235 3300026078 Ga0207702_10011639 Ga0207702_100116394 375
236 3300049742 Ga0501080_0079766 Ga0501080_0079766_156_1328 375
237 3300050493 nmdc:mga0k408_214_c1 nmdc:mga0k408_214_c1_26491_27690 375
238 3300050509 nmdc:mga0qj67_10558_c1 nmdc:mga0qj67_10558_c1_2257_3438 375
239 3300053137 Ga0500561_0000001 Ga0500561_0000001_654277_655470 375
240 3300001915 JGI24741J21665_1001897 JGI24741J21665_10018972 376
241 3300002244 JGI24742J22300_10000024 JGI24742J22300_1000002423 376
242 3300005328 Ga0070676_10002400 Ga0070676_100024003 376
243 3300006178 Ga0075367_10000245 Ga0075367_100002455 376
244 3300006186 Ga0075369_10000009 Ga0075369_1000000912 376
245 3300006195 Ga0075366_10013699 Ga0075366_100136991 376
246 3300025907 Ga0207645_10004556 Ga0207645_100045567 376
247 3300027866 Ga0209813_10005156 Ga0209813_100051561 376
248 3300050493 nmdc:mga0k408_1304_c1 nmdc:mga0k408_1304_c1_7183_8373 376
249 3300050494 nmdc:mga06z11_135_c1 nmdc:mga06z11_135_c1_22711_23901 376
250 3300050495 nmdc:mga04h51_4248_c1 nmdc:mga04h51_4248_c1_172_1362 376
251 3300050516 nmdc:mga0sz30_1_c1 nmdc:mga0sz30_1_c1_141988_143214 376

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02773

S-AdoMet_synt_C

S-adenosylmethionine synthetase, C-terminal domain

265

402

0.99

PF00438

S-AdoMet_synt_N

S-adenosylmethionine synthetase, N-terminal domain

51

136

0.93

PF02772

S-AdoMet_synt_M

S-adenosylmethionine synthetase, central domain

144

263

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5t8s-assembly1.cif.gz_A crystal structure of a s-adenosylmethionine synthase from neisseria gonorrhoeae with bound s-adenosylmethionine, amp, pyrophosphate, phosphate, and magnesium 0.9244 17 371
6fbn-assembly1.cif.gz_A human methionine adenosyltransferase ii mutant (q113a) 0.9128 18 373
5t8t-assembly1.cif.gz_A crystal structure of a s-adenosylmethionine synthase from neisseria gonorrhoeae with bound amp and magnesium 0.9095 17 371
2obv-assembly1.cif.gz_A crystal structure of the human s-adenosylmethionine synthetase 1 in complex with the product 0.909 18 373
6vd1-assembly1.cif.gz_A crystal structure of arabidopsis thaliana s-adenosylmethionine synthase 2 (atmat2) in complex with s-adenosylmethionine and ppnp 0.9077 17 374
ID Description Score Start End Superfamily
af_Q2G1W4_285_396_3.30.300.10 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3; 0.9467 274 372 3.30.300.10
af_O60198_278_377_3.30.300.10 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3; 0.9383 274 371 3.30.300.10
1fugB01 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3; 0.9368 272 371 3.30.300.10
af_B4FIE9_281_392_3.30.300.10 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3; 0.9321 274 374 3.30.300.10
af_Q58EF9_292_361_3.30.300.10 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3; 0.9308 274 340 3.30.300.10
ID Description Score Start End GO Terms
AF-A0A3B9BBD0-F1-model_v4 Methionine adenosyltransferase (EC 2.5.1.6) 0.958 267 371 GO:0004478
GO:0005524
GO:0006556
GO:0006730
GO:0046872
AF-A0A350IVA0-F1-model_v4 Methionine adenosyltransferase (EC 2.5.1.6) 0.9576 267 371 GO:0004478
GO:0005524
GO:0006556
GO:0006730
GO:0046872
AF-K2EWS3-F1-model_v4 Methionine adenosyltransferase (EC 2.5.1.6) 0.9575 51 374 GO:0004478
GO:0005524
GO:0005737
GO:0006556
GO:0006730
GO:0046872
AF-A0A838TYC1-F1-model_v4 Methionine adenosyltransferase (EC 2.5.1.6) 0.9566 17 376 GO:0004478
GO:0005524
GO:0005737
GO:0006556
GO:0006730
GO:0046872
AF-A0A1F6AVW2-F1-model_v4 Methionine adenosyltransferase (EC 2.5.1.6) 0.9521 19 374 GO:0004478
GO:0005524
GO:0005737
GO:0006556
GO:0006730
GO:0046872

Feature Viewer

pLDDT pTM Quality
79.56 0.82 High
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Predicted Structure (AlphaFold2)

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