F361878

General Info

Members Datasets Scaffolds Average Seq Length
250 188 242 221

Family's Representative Sequence

Representative Sequence 3300047320|Ga0495672_0075212|Ga0495672_0075212_559_1368
Length 269
Sequence MRCCANENSIGKLLKAEDCSKVARRSSSRKFGICLAVKEWGASMAVNDRKIRVILTGATGMVGEGVLLECLEHPAIEQVLSVSRRPSPVKDSKLRECIVPDFLQLEGVVDQLAGYDACFYCAGISSGGMSEAEYTRITYDIPLHFANTLVKLSPQMIFCHVSGSHTDSSEKGRIMWARVKGKAENALMRCGFRKVYNFRPGFMKPTPGQKNVKGYYRAIGGLYPILHALFPNHVSTMREVGLSMINSALRGYPKSVLEISDIHALARAV

Samples

Sample ID Description Type Environment
1 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
2 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
3 2818991437 Pedobacter terrae 518 Isolate Unclassified
4 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
5 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
6 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
7 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
8 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
12 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
104 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
105 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
106 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
107 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
108 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
109 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
112 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
113 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
114 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
115 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
116 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
117 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
118 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
119 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
120 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
121 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
122 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
123 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
124 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
125 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
126 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
127 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
130 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
131 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
132 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
133 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
136 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
137 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
138 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
139 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
140 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
141 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
142 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
143 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
144 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
145 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
146 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
147 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
148 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
149 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
150 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
151 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
152 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
153 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
154 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
155 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
156 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
157 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
158 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
159 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
160 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
161 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
162 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
163 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
164 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
165 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
166 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
167 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
168 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
169 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
170 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
171 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
172 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
173 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
174 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
175 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
176 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
177 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
178 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
179 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
180 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
181 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
182 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
183 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
184 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
185 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
186 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
187 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
188 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.8
Metatranscriptomes 0
Isolates 3.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.6
Nodule 0
Rhizoplane 1.2
Rhizosphere 89.6
Stem 0
Stem Tuber 0
Unclassified 5.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10049751 3300003322 Bacteria 11330
2 rootH1_10052505 3300003323 Unclassified 3909
3 rootH1_10070512 3300003323 Bacteria 20827
4 rootH1_10083857 3300003323 Bacteria 4333
5 Ga0055530_10008914 3300003791 Bacteria 3938
6 Ga0065714_10064850 3300005288 Bacteria 17027
7 Ga0070658_10020020 3300005327 Bacteria 5359
8 Ga0070676_10336401 3300005328 Bacteria 1034
9 Ga0070683_100001293 3300005329 Bacteria 19056
10 Ga0070680_100108098 3300005336 Bacteria 2314
11 Ga0070682_100042512 3300005337 Bacteria 2805
12 Ga0070682_100187216 3300005337 Bacteria 1451
13 Ga0070682_100280047 3300005337 Unclassified 1215
14 Ga0068868_100043904 3300005338 Bacteria 3493
15 Ga0070691_10178844 3300005341 Unclassified 1103
16 Ga0070669_100092216 3300005353 Bacteria 2273
17 Ga0070674_100191029 3300005356 Bacteria 1575
18 Ga0070673_100040735 3300005364 Unclassified 3566
19 Ga0070673_100135451 3300005364 Bacteria 2072
20 Ga0070659_100004014 3300005366 Bacteria 10476
21 Ga0070659_100013069 3300005366 Bacteria 6174
22 Ga0070667_100003522 3300005367 Bacteria 13336
23 Ga0070713_100116663 3300005436 Bacteria 2335
24 Ga0070694_100013710 3300005444 Bacteria 5066
25 Ga0070708_100000034 3300005445 Bacteria 86359
26 Ga0070678_100086520 3300005456 Unclassified 2391
27 Ga0070662_100004208 3300005457 Bacteria 9067
28 Ga0068867_100058108 3300005459 Bacteria 2866
29 Ga0068867_100118167 3300005459 Bacteria 2045
30 Ga0070685_10001023 3300005466 Bacteria 15056
31 Ga0070679_100343887 3300005530 Bacteria 1440
32 Ga0070684_100005390 3300005535 Bacteria 9802
33 Ga0068853_100204233 3300005539 Bacteria 1799
34 Ga0070672_100100514 3300005543 Unclassified 2346
35 Ga0070672_100550107 3300005543 Bacteria 1002
36 Ga0070695_100218866 3300005545 Bacteria 1371
37 Ga0070693_100502947 3300005547 Bacteria 860
38 Ga0070665_100025089 3300005548 Bacteria 6008
39 Ga0068854_100299810 3300005578 Unclassified 1300
40 Ga0068870_10030862 3300005840 Unclassified 2712
41 Ga0068863_100032918 3300005841 Bacteria 4939
42 Ga0068863_100111182 3300005841 Bacteria 2609
43 Ga0068863_100518386 3300005841 Archaea 1175
44 Ga0068860_100137308 3300005843 Unclassified 2348
45 Ga0081540_1144913 3300005983 Bacteria 947
46 Ga0097621_100009017 3300006237 Bacteria 7222
47 Ga0097621_100018297 3300006237 Bacteria 5346
48 Ga0097621_100797761 3300006237 Unclassified 875
49 Ga0068871_100041308 3300006358 Bacteria 3697
50 Ga0068871_100109896 3300006358 Bacteria 2318
51 Ga0068871_100889059 3300006358 Bacteria 825
52 Ga0075431_100136333 3300006847 Bacteria 2531
53 Ga0068865_100050849 3300006881 Bacteria 2865
54 Ga0068865_100101261 3300006881 Bacteria 2109
55 Ga0105244_10011646 3300009036 Bacteria 5254
56 Ga0105240_10000008 3300009093 Bacteria 618862
57 Ga0105245_10014321 3300009098 Bacteria 6910
58 Ga0105243_10038344 3300009148 Bacteria 3732
59 Ga0105243_10266811 3300009148 Bacteria 1535
60 Ga0105241_10960449 3300009174 Bacteria 797
61 Ga0105242_10262765 3300009176 Bacteria 1560
62 Ga0105242_10466109 3300009176 Bacteria 1194
63 Ga0105242_10492505 3300009176 Bacteria 1164
64 Ga0105248_10111075 3300009177 Bacteria 3091
65 Ga0105248_10118415 3300009177 Bacteria 2987
66 Ga0105248_10171313 3300009177 Bacteria 2446
67 Ga0105248_10429839 3300009177 Bacteria 1487
68 Ga0105237_10902470 3300009545 Bacteria 891
69 Ga0105249_10447431 3300009553 Bacteria 1330
70 Ga0157373_10000024 3300013100 Bacteria 153349
71 Ga0157370_10061311 3300013104 Bacteria 3570
72 Ga0157370_10160384 3300013104 Unclassified 2092
73 Ga0157370_10502413 3300013104 Unclassified 1113
74 Ga0157369_10117948 3300013105 Bacteria 2817
75 Ga0157374_10572792 3300013296 Bacteria 1138
76 Ga0157378_11142139 3300013297 Bacteria 817
77 Ga0163162_10051861 3300013306 Bacteria 4118
78 Ga0163162_10243901 3300013306 Bacteria 1928
79 Ga0157375_10087296 3300013308 Unclassified 3172
80 Ga0157375_10352350 3300013308 Bacteria 1638
81 Ga0157375_10427249 3300013308 Bacteria 1491
82 Ga0163163_10042764 3300014325 Unclassified 4438
83 Ga0182008_10000029 3300014497 Bacteria 176649
84 Ga0182008_10001153 3300014497 Bacteria 18233
85 Ga0182008_10026933 3300014497 Bacteria 2914
86 Ga0157377_10305682 3300014745 Bacteria 1051
87 Ga0157377_10416319 3300014745 Unclassified 919
88 Ga0157376_10058000 3300014969 Bacteria 3241
89 Ga0157376_10064068 3300014969 Bacteria 3099
90 Ga0157376_10147388 3300014969 Bacteria 2118
91 Ga0182007_10006219 3300015262 Bacteria 5144
92 Ga0213876_10072579 3300021384 Unclassified 1818
93 Ga0207426_1014438 3300025302 Unclassified 2893
94 Ga0207655_1011501 3300025728 Bacteria 5261
95 Ga0207642_10385479 3300025899 Bacteria 835
96 Ga0207699_10323559 3300025906 Unclassified 1082
97 Ga0207645_10000299 3300025907 Bacteria 41520
98 Ga0207695_10000021 3300025913 Bacteria 679399
99 Ga0207662_10308365 3300025918 Bacteria 1054
100 Ga0207652_10545209 3300025921 Bacteria 1043
101 Ga0207681_10040585 3300025923 Bacteria 3098
102 Ga0207681_10621857 3300025923 Bacteria 894
103 Ga0207650_10465080 3300025925 Bacteria 1054
104 Ga0207700_10679737 3300025928 Bacteria 918
105 Ga0207706_10004462 3300025933 Bacteria 13143
106 Ga0207686_10039685 3300025934 Bacteria 2858
107 Ga0207669_10039543 3300025937 Bacteria 2727
108 Ga0207704_10091384 3300025938 Bacteria 2000
109 Ga0207704_10420701 3300025938 Bacteria 1059
110 Ga0207691_10060770 3300025940 Bacteria 3433
111 Ga0207711_10017613 3300025941 Bacteria 5933
112 Ga0207711_10046551 3300025941 Bacteria 3707
113 Ga0207711_10076608 3300025941 Bacteria 2913
114 Ga0207661_10037627 3300025944 Bacteria 3786
115 Ga0207661_10574048 3300025944 Bacteria 1034
116 Ga0207651_10129711 3300025960 Unclassified 1928
117 Ga0207668_10542864 3300025972 Bacteria 1006
118 Ga0207658_10012904 3300025986 Bacteria 5706
119 Ga0207677_10068187 3300026023 Bacteria 2495
120 Ga0207639_10388599 3300026041 Bacteria 1255
121 Ga0207678_10106998 3300026067 Bacteria 2386
122 Ga0207641_10129099 3300026088 Bacteria 2267
123 Ga0207648_10005652 3300026089 Bacteria 12554
124 Ga0207648_10010316 3300026089 Bacteria 8866
125 Ga0207648_10044734 3300026089 Bacteria 3884
126 Ga0207648_10056838 3300026089 Bacteria 3414
127 Ga0207676_10114021 3300026095 Bacteria 2267
128 Ga0207675_100007666 3300026118 Bacteria 10191
129 Ga0207683_10002687 3300026121 Bacteria 15539
130 Ga0268266_10021627 3300028379 Bacteria 5480
131 Ga0268264_10037250 3300028381 Unclassified 4010
132 Ga0268264_10905732 3300028381 Unclassified 885
133 Ga0265337_1014316 3300028556 Unclassified 2632
134 Ga0307515_10000135 3300028794 Bacteria 175323
135 Ga0307515_10000430 3300028794 Bacteria 101168
136 Ga0265338_10414284 3300028800 Bacteria 959
137 Ga0316177_1103046 3300030731 Bacteria 1538
138 Ga0316176_1064051 3300030732 Bacteria 8797
139 Ga0316183_1145092 3300030742 Bacteria 25653
140 Ga0316181_1014202 3300030744 Bacteria 22841
141 Ga0265325_10114687 3300031241 Bacteria 1305
142 Ga0265327_10087585 3300031251 Bacteria 1525
143 Ga0265316_10100073 3300031344 Bacteria 2204
144 Ga0265314_10044302 3300031711 Bacteria 3155
145 Ga0316576_10094382 3300031727 Bacteria 2231
146 Ga0307405_10000182 3300031731 Bacteria 23237
147 Ga0307409_100225757 3300031995 Bacteria 1694
148 Ga0316580_10110887 3300032139 Bacteria 840
149 Ga0307510_10010191 3300033180 Bacteria 11173
150 Ga0373934_0000372 3300035086 Bacteria 15670
151 Ga0373936_0115730 3300035113 Bacteria 1142
152 Ga0373953_0002449 3300035117 Bacteria 5613
153 Ga0373954_0026209 3300035118 Bacteria 2671
154 Ga0373956_0000363 3300035119 Bacteria 18477
155 Ga0373957_0014205 3300035120 Bacteria 2718
156 Ga0373955_0083685 3300035172 Bacteria 1808
157 Ga0373924_0029272 3300035410 Bacteria 2200
158 Ga0373935_0785918 3300035692 Bacteria 702
159 Ga0373933_0000078 3300035724 Bacteria 61282
160 Ga0373937_0000396 3300036401 Bacteria 40607
161 Ga0436365_0730281 3300039437 Bacteria 3008
162 Ga0451807_0781976 3300041486 Bacteria 1245
163 Ga0451577_0001966 3300042876 Bacteria 25843
164 Ga0451577_0181953 3300042876 Unclassified 1895
165 Ga0453683_0000031 3300044673 Bacteria 241998
166 Ga0453684_0001006 3300044712 Bacteria 91343
167 Ga0453684_0096122 3300044712 Unclassified 3640
168 Ga0453684_0302416 3300044712 Bacteria 1818
169 Ga0453684_0432899 3300044712 Bacteria 1467
170 Ga0453684_0535684 3300044712 Bacteria 1292
171 Ga0453684_0900866 3300044712 Bacteria 947
172 Ga0466971_0042938 3300044719 Unclassified 2032
173 Ga0451576_0000083 3300045051 Bacteria 236908
174 Ga0451576_0641846 3300045051 Unclassified 1115
175 Ga0495592_0000812 3300046454 Bacteria 21642
176 Ga0495629_0087868 3300046459 Bacteria 2168
177 Ga0495651_0000094 3300046462 Bacteria 65344
178 Ga0495653_0000121 3300046463 Bacteria 65169
179 Ga0495650_0000186 3300046471 Bacteria 136572
180 Ga0495650_0037514 3300046471 Bacteria 2109
181 Ga0495650_0100013 3300046471 Bacteria 1090
182 Ga0495664_0157892 3300046477 Bacteria 1376
183 Ga0495583_0063239 3300046506 Unclassified 1645
184 Ga0495606_0005390 3300046507 Bacteria 12265
185 Ga0495606_0030010 3300046507 Bacteria 3807
186 Ga0495606_0060423 3300046507 Unclassified 2427
187 Ga0495606_0080343 3300046507 Bacteria 2029
188 Ga0495608_0000155 3300046511 Bacteria 49189
189 Ga0495618_0064809 3300046514 Bacteria 2322
190 Ga0495628_0000899 3300046516 Bacteria 27352
191 Ga0495630_0003933 3300046517 Bacteria 10382
192 Ga0495632_0069492 3300046519 Unclassified 1696
193 Ga0495652_0005387 3300046529 Bacteria 12058
194 Ga0495665_0017068 3300046531 Bacteria 3905
195 Ga0495645_0000513 3300046543 Bacteria 26734
196 Ga0495645_0208776 3300046543 Bacteria 1320
197 Ga0495667_0009246 3300046559 Bacteria 6684
198 Ga0495625_0042471 3300046660 Bacteria 3304
199 Ga0495625_0054680 3300046660 Bacteria 2850
200 Ga0495625_0209023 3300046660 Bacteria 1284
201 Ga0495635_0000039 3300046663 Bacteria 89884
202 Ga0495588_0013901 3300046674 Bacteria 3843
203 Ga0495657_0000332 3300046675 Bacteria 43469
204 Ga0495599_0000300 3300046678 Bacteria 30013
205 Ga0495623_0000064 3300046679 Bacteria 66746
206 Ga0495646_0000831 3300046680 Bacteria 17403
207 Ga0495669_0011793 3300046684 Bacteria 3716
208 Ga0495649_0237473 3300046694 Bacteria 939
209 Ga0495589_0039857 3300046794 Unclassified 2347
210 Ga0495600_0000191 3300046809 Bacteria 35637
211 Ga0495581_0111109 3300047315 Bacteria 1594
212 Ga0495604_0000504 3300047317 Bacteria 34336
213 Ga0495674_0009187 3300047319 Bacteria 9393
214 Ga0495674_0016038 3300047319 Bacteria 6991
215 Ga0495672_0000840 3300047320 Bacteria 32662
216 Ga0495672_0075212 3300047320 Bacteria 1900
217 Ga0495680_0029059 3300047322 Bacteria 4530
218 Ga0495675_0020254 3300047444 Bacteria 4229
219 Ga0495673_0042908 3300047469 Unclassified 2027
220 Ga0495684_0000293 3300047471 Bacteria 40716
221 Ga0495686_0000443 3300047472 Bacteria 62754
222 Ga0495686_0000625 3300047472 Bacteria 48634
223 Ga0495686_0001363 3300047472 Bacteria 27253
224 Ga0495686_0004324 3300047472 Bacteria 11742
225 Ga0495593_0176990 3300047673 Bacteria 1074
226 Ga0495602_0001078 3300048088 Bacteria 26784
227 Ga0496101_0310745 3300048904 Bacteria 1236
228 Ga0496104_0156187 3300048907 Bacteria 2189
229 Ga0496121_0000011 3300048924 Bacteria 792193
230 Ga0496126_0132487 3300048929 Bacteria 2153
231 Ga0501067_0424905 3300049583 Bacteria 742
232 nmdc:mga0qj67_36716_c1 3300050509 Bacteria 3835
233 Ga0495601_0009345 3300053077 Bacteria 5797
234 Ga0495612_0000158 3300053078 Bacteria 28440
235 Ga0495595_0007490 3300053084 Bacteria 4472
236 Ga0500644_0011203 3300053088 Bacteria 2446
237 Ga0500555_009786 3300053103 Bacteria 2743
238 Ga0500562_003080 3300053108 Bacteria 4165
239 Ga0500595_006724 3300053119 Unclassified 4849
240 Ga0500595_097477 3300053119 Bacteria 845
241 Ga0500608_038561 3300053122 Bacteria 2286
242 Ga0500616_0063681 3300053153 Bacteria 1901

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025906 Ga0207699_10323559 Ga0207699_103235592 186
2 3300028800 Ga0265338_10414284 Ga0265338_104142842 195
3 3300005329 Ga0070683_100001293 Ga0070683_10000129312 197
4 3300005535 Ga0070684_100005390 Ga0070684_1000053903 197
5 3300025944 Ga0207661_10037627 Ga0207661_100376274 197
6 3300044712 Ga0453684_0900866 Ga0453684_0900866_19_648 205
7 3300026118 Ga0207675_100007666 Ga0207675_10000766611 207
8 3300030731 Ga0316177_1103046 Ga0316177_11030462 207
9 3300035692 Ga0373935_0785918 Ga0373935_0785918_41_676 207
10 3300005328 Ga0070676_10336401 Ga0070676_103364011 208
11 3300005548 Ga0070665_100025089 Ga0070665_1000250895 208
12 3300028379 Ga0268266_10021627 Ga0268266_100216272 208
13 3300035410 Ga0373924_0029272 Ga0373924_0029272_1353_1994 208
14 3300005459 Ga0068867_100118167 Ga0068867_1001181672 210
15 3300014745 Ga0157377_10305682 Ga0157377_103056822 210
16 iso_pu_bacteria 2919692658 2919693042 211
17 iso_pu_bacteria 2896109856 2896113854 212
18 iso_pu_bacteria 2842903701 2842904629 213
19 iso_pu_bacteria 2582581865 2585389816 214
20 3300005288 Ga0065714_10064850 Ga0065714_1006485021 215
21 3300005466 Ga0070685_10001023 Ga0070685_1000102315 215
22 3300009148 Ga0105243_10266811 Ga0105243_102668112 215
23 3300009176 Ga0105242_10466109 Ga0105242_104661091 215
24 3300013100 Ga0157373_10000024 Ga0157373_1000002498 215
25 3300013104 Ga0157370_10061311 Ga0157370_100613113 215
26 3300013104 Ga0157370_10502413 Ga0157370_105024132 215
27 3300013105 Ga0157369_10117948 Ga0157369_101179482 215
28 3300013308 Ga0157375_10427249 Ga0157375_104272492 215
29 3300014497 Ga0182008_10000029 Ga0182008_10000029120 215
30 3300014497 Ga0182008_10001153 Ga0182008_100011536 215
31 3300025728 Ga0207655_1011501 Ga0207655_10115016 215
32 3300025918 Ga0207662_10308365 Ga0207662_103083652 215
33 3300003323 rootH1_10052505 rootH1_100525053 216
34 3300003323 rootH1_10083857 rootH1_100838572 216
35 3300005337 Ga0070682_100187216 Ga0070682_1001872162 216
36 3300005364 Ga0070673_100135451 Ga0070673_1001354512 216
37 3300005543 Ga0070672_100550107 Ga0070672_1005501071 216
38 3300005841 Ga0068863_100111182 Ga0068863_1001111822 216
39 3300006237 Ga0097621_100018297 Ga0097621_1000182972 216
40 3300006358 Ga0068871_100041308 Ga0068871_1000413083 216
41 3300006881 Ga0068865_100101261 Ga0068865_1001012612 216
42 3300025937 Ga0207669_10039543 Ga0207669_100395432 216
43 3300025938 Ga0207704_10420701 Ga0207704_104207012 216
44 3300025941 Ga0207711_10046551 Ga0207711_100465514 216
45 3300025941 Ga0207711_10076608 Ga0207711_100766082 216
46 3300026088 Ga0207641_10129099 Ga0207641_101290993 216
47 3300026089 Ga0207648_10056838 Ga0207648_100568382 216
48 3300026095 Ga0207676_10114021 Ga0207676_101140212 216
49 3300053103 Ga0500555_009786 Ga0500555_009786_691_1341 216
50 iso_pu_bacteria 2585428061 2587752080 216
51 3300005336 Ga0070680_100108098 Ga0070680_1001080981 217
52 3300005338 Ga0068868_100043904 Ga0068868_1000439043 217
53 3300005341 Ga0070691_10178844 Ga0070691_101788442 217
54 3300005436 Ga0070713_100116663 Ga0070713_1001166631 217
55 3300005445 Ga0070708_100000034 Ga0070708_10000003422 217
56 3300005459 Ga0068867_100058108 Ga0068867_1000581082 217
57 3300005530 Ga0070679_100343887 Ga0070679_1003438872 217
58 3300005545 Ga0070695_100218866 Ga0070695_1002188661 217
59 3300005547 Ga0070693_100502947 Ga0070693_1005029472 217
60 3300005841 Ga0068863_100032918 Ga0068863_1000329184 217
61 3300005841 Ga0068863_100518386 Ga0068863_1005183862 217
62 3300006237 Ga0097621_100797761 Ga0097621_1007977612 217
63 3300006358 Ga0068871_100109896 Ga0068871_1001098962 217
64 3300006847 Ga0075431_100136333 Ga0075431_1001363332 217
65 3300009036 Ga0105244_10011646 Ga0105244_100116466 217
66 3300014497 Ga0182008_10026933 Ga0182008_100269333 217
67 3300014969 Ga0157376_10058000 Ga0157376_100580003 217
68 3300015262 Ga0182007_10006219 Ga0182007_100062195 217
69 3300025921 Ga0207652_10545209 Ga0207652_105452092 217
70 3300025928 Ga0207700_10679737 Ga0207700_106797372 217
71 3300025944 Ga0207661_10574048 Ga0207661_105740482 217
72 3300026023 Ga0207677_10068187 Ga0207677_100681872 217
73 3300026089 Ga0207648_10010316 Ga0207648_100103162 217
74 3300028381 Ga0268264_10905732 Ga0268264_109057321 217
75 3300028794 Ga0307515_10000135 Ga0307515_10000135157 217
76 3300030732 Ga0316176_1064051 Ga0316176_10640517 217
77 3300030742 Ga0316183_1145092 Ga0316183_11450923 217
78 3300030744 Ga0316181_1014202 Ga0316181_10142023 217
79 3300031241 Ga0265325_10114687 Ga0265325_101146872 217
80 3300031731 Ga0307405_10000182 Ga0307405_1000018224 217
81 3300035086 Ga0373934_0000372 Ga0373934_0000372_7688_8353 217
82 3300035117 Ga0373953_0002449 Ga0373953_0002449_4930_5595 217
83 3300035118 Ga0373954_0026209 Ga0373954_0026209_1087_1752 217
84 3300035119 Ga0373956_0000363 Ga0373956_0000363_12683_13348 217
85 3300035120 Ga0373957_0014205 Ga0373957_0014205_900_1565 217
86 3300035172 Ga0373955_0083685 Ga0373955_0083685_79_744 217
87 3300035724 Ga0373933_0000078 Ga0373933_0000078_23838_24503 217
88 3300036401 Ga0373937_0000396 Ga0373937_0000396_5828_6493 217
89 3300041486 Ga0451807_0781976 Ga0451807_0781976_349_1005 217
90 3300046454 Ga0495592_0000812 Ga0495592_0000812_12784_13449 217
91 3300046462 Ga0495651_0000094 Ga0495651_0000094_26375_27040 217
92 3300046463 Ga0495653_0000121 Ga0495653_0000121_26008_26673 217
93 3300046477 Ga0495664_0157892 Ga0495664_0157892_72_737 217
94 3300046511 Ga0495608_0000155 Ga0495608_0000155_770_1435 217
95 3300046514 Ga0495618_0064809 Ga0495618_0064809_721_1386 217
96 3300046516 Ga0495628_0000899 Ga0495628_0000899_6176_6841 217
97 3300046517 Ga0495630_0003933 Ga0495630_0003933_1820_2485 217
98 3300046529 Ga0495652_0005387 Ga0495652_0005387_4863_5528 217
99 3300046531 Ga0495665_0017068 Ga0495665_0017068_2559_3224 217
100 3300046543 Ga0495645_0000513 Ga0495645_0000513_3016_3681 217
101 3300046543 Ga0495645_0208776 Ga0495645_0208776_404_1069 217
102 3300046559 Ga0495667_0009246 Ga0495667_0009246_5941_6606 217
103 3300046663 Ga0495635_0000039 Ga0495635_0000039_21395_22060 217
104 3300046674 Ga0495588_0013901 Ga0495588_0013901_1324_1998 217
105 3300046675 Ga0495657_0000332 Ga0495657_0000332_19090_19755 217
106 3300046678 Ga0495599_0000300 Ga0495599_0000300_1327_1992 217
107 3300046679 Ga0495623_0000064 Ga0495623_0000064_32495_33160 217
108 3300046680 Ga0495646_0000831 Ga0495646_0000831_3656_4321 217
109 3300046809 Ga0495600_0000191 Ga0495600_0000191_9803_10468 217
110 3300047315 Ga0495581_0111109 Ga0495581_0111109_606_1271 217
111 3300047317 Ga0495604_0000504 Ga0495604_0000504_14785_15450 217
112 3300047319 Ga0495674_0009187 Ga0495674_0009187_8256_8921 217
113 3300047322 Ga0495680_0029059 Ga0495680_0029059_1003_1668 217
114 3300047444 Ga0495675_0020254 Ga0495675_0020254_1704_2369 217
115 3300047471 Ga0495684_0000293 Ga0495684_0000293_10408_11073 217
116 3300047673 Ga0495593_0176990 Ga0495593_0176990_201_866 217
117 3300048088 Ga0495602_0001078 Ga0495602_0001078_16585_17250 217
118 3300053077 Ga0495601_0009345 Ga0495601_0009345_4472_5137 217
119 3300053078 Ga0495612_0000158 Ga0495612_0000158_6686_7351 217
120 3300053084 Ga0495595_0007490 Ga0495595_0007490_2811_3476 217
121 iso_pu_bacteria 2818991437 2819550054 217
122 iso_pu_bacteria 2977232053 2977232360 217
123 3300003791 Ga0055530_10008914 Ga0055530_100089144 218
124 3300005327 Ga0070658_10020020 Ga0070658_100200203 218
125 3300005337 Ga0070682_100042512 Ga0070682_1000425121 218
126 3300005353 Ga0070669_100092216 Ga0070669_1000922161 218
127 3300005366 Ga0070659_100004014 Ga0070659_1000040147 218
128 3300005444 Ga0070694_100013710 Ga0070694_1000137103 218
129 3300005457 Ga0070662_100004208 Ga0070662_1000042085 218
130 3300005983 Ga0081540_1144913 Ga0081540_11449131 218
131 3300006358 Ga0068871_100889059 Ga0068871_1008890591 218
132 3300009177 Ga0105248_10111075 Ga0105248_101110751 218
133 3300013104 Ga0157370_10160384 Ga0157370_101603843 218
134 3300013297 Ga0157378_11142139 Ga0157378_111421391 218
135 3300013306 Ga0163162_10051861 Ga0163162_100518615 218
136 3300025302 Ga0207426_1014438 Ga0207426_10144381 218
137 3300025923 Ga0207681_10040585 Ga0207681_100405852 218
138 3300025933 Ga0207706_10004462 Ga0207706_100044625 218
139 3300025941 Ga0207711_10017613 Ga0207711_100176133 218
140 3300026041 Ga0207639_10388599 Ga0207639_103885992 218
141 3300031251 Ga0265327_10087585 Ga0265327_100875852 218
142 3300031344 Ga0265316_10100073 Ga0265316_101000732 218
143 3300031711 Ga0265314_10044302 Ga0265314_100443022 218
144 3300031995 Ga0307409_100225757 Ga0307409_1002257572 218
145 3300042876 Ga0451577_0181953 Ga0451577_0181953_1060_1716 218
146 3300044673 Ga0453683_0000031 Ga0453683_0000031_231465_232121 218
147 3300044712 Ga0453684_0096122 Ga0453684_0096122_593_1249 218
148 3300044712 Ga0453684_0302416 Ga0453684_0302416_819_1490 218
149 3300044719 Ga0466971_0042938 Ga0466971_0042938_1319_2008 218
150 3300045051 Ga0451576_0641846 Ga0451576_0641846_431_1087 218
151 3300046459 Ga0495629_0087868 Ga0495629_0087868_1283_1960 218
152 3300046507 Ga0495606_0080343 Ga0495606_0080343_1336_1995 218
153 3300046684 Ga0495669_0011793 Ga0495669_0011793_245_913 218
154 3300047319 Ga0495674_0016038 Ga0495674_0016038_5046_5723 218
155 3300048904 Ga0496101_0310745 Ga0496101_0310745_514_1182 218
156 3300048924 Ga0496121_0000011 Ga0496121_0000011_580968_581624 218
157 3300049583 Ga0501067_0424905 Ga0501067_0424905_48_719 218
158 3300050509 nmdc:mga0qj67_36716_c1 nmdc:mga0qj67_36716_c1_1647_2318 218
159 3300053088 Ga0500644_0011203 Ga0500644_0011203_1115_1795 218
160 3300053108 Ga0500562_003080 Ga0500562_003080_2151_2831 218
161 iso_pu_bacteria 2883068021 2883069187 218
162 3300005337 Ga0070682_100280047 Ga0070682_1002800471 219
163 3300005366 Ga0070659_100013069 Ga0070659_1000130696 219
164 3300026067 Ga0207678_10106998 Ga0207678_101069982 219
165 3300046471 Ga0495650_0000186 Ga0495650_0000186_32505_33173 219
166 3300046660 Ga0495625_0042471 Ga0495625_0042471_2147_2815 219
167 3300047472 Ga0495686_0001363 Ga0495686_0001363_14237_14896 219
168 3300003322 rootL2_10049751 rootL2_100497519 220
169 3300003323 rootH1_10070512 rootH1_100705127 220
170 3300005356 Ga0070674_100191029 Ga0070674_1001910291 220
171 3300005364 Ga0070673_100040735 Ga0070673_1000407353 220
172 3300005367 Ga0070667_100003522 Ga0070667_10000352212 220
173 3300005456 Ga0070678_100086520 Ga0070678_1000865202 220
174 3300005539 Ga0068853_100204233 Ga0068853_1002042332 220
175 3300005543 Ga0070672_100100514 Ga0070672_1001005142 220
176 3300005578 Ga0068854_100299810 Ga0068854_1002998102 220
177 3300005840 Ga0068870_10030862 Ga0068870_100308622 220
178 3300005843 Ga0068860_100137308 Ga0068860_1001373082 220
179 3300006237 Ga0097621_100009017 Ga0097621_1000090177 220
180 3300006881 Ga0068865_100050849 Ga0068865_1000508491 220
181 3300009093 Ga0105240_10000008 Ga0105240_10000008168 220
182 3300009098 Ga0105245_10014321 Ga0105245_100143213 220
183 3300009148 Ga0105243_10038344 Ga0105243_100383443 220
184 3300009174 Ga0105241_10960449 Ga0105241_109604491 220
185 3300009176 Ga0105242_10262765 Ga0105242_102627653 220
186 3300009176 Ga0105242_10492505 Ga0105242_104925052 220
187 3300009177 Ga0105248_10118415 Ga0105248_101184152 220
188 3300009177 Ga0105248_10171313 Ga0105248_101713134 220
189 3300009177 Ga0105248_10429839 Ga0105248_104298392 220
190 3300009545 Ga0105237_10902470 Ga0105237_109024702 220
191 3300009553 Ga0105249_10447431 Ga0105249_104474312 220
192 3300013296 Ga0157374_10572792 Ga0157374_105727922 220
193 3300013306 Ga0163162_10243901 Ga0163162_102439013 220
194 3300013308 Ga0157375_10087296 Ga0157375_100872961 220
195 3300013308 Ga0157375_10352350 Ga0157375_103523502 220
196 3300014325 Ga0163163_10042764 Ga0163163_100427648 220
197 3300014745 Ga0157377_10416319 Ga0157377_104163191 220
198 3300014969 Ga0157376_10064068 Ga0157376_100640682 220
199 3300014969 Ga0157376_10147388 Ga0157376_101473882 220
200 3300021384 Ga0213876_10072579 Ga0213876_100725792 220
201 3300025899 Ga0207642_10385479 Ga0207642_103854791 220
202 3300025907 Ga0207645_10000299 Ga0207645_1000029914 220
203 3300025913 Ga0207695_10000021 Ga0207695_10000021232 220
204 3300025923 Ga0207681_10621857 Ga0207681_106218571 220
205 3300025925 Ga0207650_10465080 Ga0207650_104650802 220
206 3300025934 Ga0207686_10039685 Ga0207686_100396852 220
207 3300025938 Ga0207704_10091384 Ga0207704_100913842 220
208 3300025940 Ga0207691_10060770 Ga0207691_100607703 220
209 3300025960 Ga0207651_10129711 Ga0207651_101297111 220
210 3300025972 Ga0207668_10542864 Ga0207668_105428642 220
211 3300025986 Ga0207658_10012904 Ga0207658_100129042 220
212 3300026089 Ga0207648_10005652 Ga0207648_1000565212 220
213 3300026089 Ga0207648_10044734 Ga0207648_100447342 220
214 3300026121 Ga0207683_10002687 Ga0207683_100026879 220
215 3300028381 Ga0268264_10037250 Ga0268264_100372504 220
216 3300028556 Ga0265337_1014316 Ga0265337_10143162 220
217 3300028794 Ga0307515_10000430 Ga0307515_1000043023 220
218 3300031727 Ga0316576_10094382 Ga0316576_100943822 220
219 3300032139 Ga0316580_10110887 Ga0316580_101108871 220
220 3300033180 Ga0307510_10010191 Ga0307510_100101914 220
221 3300035113 Ga0373936_0115730 Ga0373936_0115730_135_803 220
222 3300039437 Ga0436365_0730281 Ga0436365_0730281_1006_1671 220
223 3300042876 Ga0451577_0001966 Ga0451577_0001966_13692_14357 220
224 3300044712 Ga0453684_0001006 Ga0453684_0001006_87118_87783 220
225 3300044712 Ga0453684_0432899 Ga0453684_0432899_642_1319 220
226 3300044712 Ga0453684_0535684 Ga0453684_0535684_185_853 220
227 3300045051 Ga0451576_0000083 Ga0451576_0000083_87104_87769 220
228 3300046471 Ga0495650_0037514 Ga0495650_0037514_874_1536 220
229 3300046471 Ga0495650_0100013 Ga0495650_0100013_283_945 220
230 3300046506 Ga0495583_0063239 Ga0495583_0063239_763_1440 220
231 3300046507 Ga0495606_0005390 Ga0495606_0005390_10975_11640 220
232 3300046507 Ga0495606_0030010 Ga0495606_0030010_48_725 220
233 3300046507 Ga0495606_0060423 Ga0495606_0060423_81_746 220
234 3300046519 Ga0495632_0069492 Ga0495632_0069492_920_1597 220
235 3300046660 Ga0495625_0054680 Ga0495625_0054680_1750_2427 220
236 3300046660 Ga0495625_0209023 Ga0495625_0209023_507_1187 220
237 3300046694 Ga0495649_0237473 Ga0495649_0237473_169_846 220
238 3300046794 Ga0495589_0039857 Ga0495589_0039857_13_690 220
239 3300047320 Ga0495672_0000840 Ga0495672_0000840_17945_18649 220
240 3300047320 Ga0495672_0075212 Ga0495672_0075212_559_1368 220
241 3300047469 Ga0495673_0042908 Ga0495673_0042908_491_1168 220
242 3300047472 Ga0495686_0000443 Ga0495686_0000443_37308_37970 220
243 3300047472 Ga0495686_0000625 Ga0495686_0000625_3658_4362 220
244 3300047472 Ga0495686_0004324 Ga0495686_0004324_5508_6185 220
245 3300048907 Ga0496104_0156187 Ga0496104_0156187_991_1674 220
246 3300048929 Ga0496126_0132487 Ga0496126_0132487_275_955 220
247 3300053119 Ga0500595_006724 Ga0500595_006724_2179_2856 220
248 3300053119 Ga0500595_097477 Ga0500595_097477_132_809 220
249 3300053122 Ga0500608_038561 Ga0500608_038561_962_1624 220
250 3300053153 Ga0500616_0063681 Ga0500616_0063681_1005_1667 220

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

53

170

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fmu-assembly1.cif.gz_A crystal structure of a tat-interacting protein homologue (htatip2, aw111545, cc3, tip30) from mus musculus at 2.30 a resolution 0.8606 3 220
2bka-assembly1.cif.gz_A-2 cc3(tip30)crystal structure 0.8015 3 218
2fmu-assembly1.cif.gz_A crystal structure of a tat-interacting protein homologue (htatip2, aw111545, cc3, tip30) from mus musculus at 2.30 a resolution 0.7886 3 220
2bka-assembly1.cif.gz_A-2 cc3(tip30)crystal structure 0.7847 3 218
2dfd-assembly1.cif.gz_A crystal structure of human malate dehydrogenase type 2 0.7692 3 111
ID Description Score Start End Superfamily
af_Q54WF5_27_272_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9522 2 220 3.40.50.720
af_Q54WF5_27_272_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9438 2 220 3.40.50.720
2fmuA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8606 3 220 3.40.50.720
af_Q5AP65_1_228_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8339 3 219 3.40.50.720
af_Q5DX36_1_216_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8246 3 220 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6N7BEA7-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9885 1 218
AF-A0A327SI48-F1-model_v4 Uncharacterized protein YbjT (DUF2867 family) 0.9842 3 220
AF-A0A519SIT4-F1-model_v4 Epimerase 0.9841 1 220
AF-A0A6N4EC56-F1-model_v4 deleted 0.9834 1 220
AF-A0A6N4QXC0-F1-model_v4 Epimerase 0.9826 1 220

Feature Viewer

pLDDT pTM Quality
91.93 0.9 High
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Predicted Structure (AlphaFold2)

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