F361651

General Info

Members Datasets Scaffolds Average Seq Length
250 163 238 391

Family's Representative Sequence

Representative Sequence 3300026116|Ga0207674_10331375|Ga0207674_103313751
Length 427
Sequence MPDDSPSPAASADVSRSARRVVSRMAASSRKDTPRPAEAARRSIDGVRIALFSGNYNIIVDGANKALNRLVEYLQRNGAQVRVYSATSERPAFKPQGTLVSLPSIAFPMRAEYRIPIALSHRARSDLESFAPDVVHISAPDFAARAAARWARARNIPVLASVHTRFETYASYYGMGFLEGPLKAWLRRLYRQCDALVAPSPGMVEVLREQQMNDDISLWERGVDRDVFNSGRRDMAWRRSLGIADSDVAIGFLGRLVMEKGLDAFCATITELRRRGAIHKVLVVGDGPARERFEERLPQAVFTGFQQGSQLGRAVASMDVLFNPSTTETFGNVTLEAMACGVPVVAARATGSSCLVADGGYGRLVPPDDIAAFADALAAYIVDPQLRAAHGRAGEERSRAYTWDSINRAVAETYLRLIEAHRPRVST

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
3 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
4 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
5 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
6 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
7 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
8 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
9 2896184354 Aurantiacibacter suaedae GH3-15 Isolate Rhizosphere
10 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
11 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
12 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
13 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere
14 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
15 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
16 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
17 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
18 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
19 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
20 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
21 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
22 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
23 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
24 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
52 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
66 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
67 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
72 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
110 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
113 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
114 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
117 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
118 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
119 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
122 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
123 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
124 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
125 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
128 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
129 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
130 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
131 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
139 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
140 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
141 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
142 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
143 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
144 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
145 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
148 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
154 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
155 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
156 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
157 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
158 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
159 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
161 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
162 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
163 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.2
Metatranscriptomes 0
Isolates 4.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.2
Nodule 0.8
Rhizoplane 4.4
Rhizosphere 72.8
Stem 0
Stem Tuber 0
Unclassified 10.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_617173 2162886007 Bacteria 4952
2 JGI25150J39212_1002251 3300002774 Bacteria 4891
3 JGI25153J46596_10000029 3300003215 Bacteria 201658
4 Ga0055526_1004757 3300003771 Bacteria 8041
5 Ga0055537_1003082 3300003773 Bacteria 5247
6 Ga0065704_10072112 3300005289 Bacteria 9140
7 Ga0070658_10000475 3300005327 Bacteria 34795
8 Ga0070658_10001814 3300005327 Bacteria 17966
9 Ga0070658_10070331 3300005327 Bacteria 2865
10 Ga0070658_10182455 3300005327 Bacteria 1766
11 Ga0070683_100009121 3300005329 Bacteria 8467
12 Ga0070683_100033608 3300005329 Bacteria 4677
13 Ga0070666_10000408 3300005335 Bacteria 26751
14 Ga0070666_10230716 3300005335 Bacteria 1307
15 Ga0070680_100001532 3300005336 Bacteria 16845
16 Ga0070682_100082666 3300005337 Bacteria 2082
17 Ga0070682_100103999 3300005337 Bacteria 1880
18 Ga0070660_100006721 3300005339 Bacteria 7979
19 Ga0070660_100036832 3300005339 Bacteria 3707
20 Ga0070661_100083835 3300005344 Bacteria 2355
21 Ga0070668_100042651 3300005347 Bacteria 3478
22 Ga0070668_100058586 3300005347 Bacteria 2980
23 Ga0070669_100000109 3300005353 Bacteria 80041
24 Ga0070669_100000184 3300005353 Bacteria 54362
25 Ga0070671_100003467 3300005355 Bacteria 12311
26 Ga0070671_100018367 3300005355 Bacteria 5680
27 Ga0070659_100105552 3300005366 Bacteria 2270
28 Ga0070667_100001326 3300005367 Bacteria 22234
29 Ga0070667_100024991 3300005367 Bacteria 4963
30 Ga0070667_100134977 3300005367 Bacteria 2157
31 Ga0070705_100020081 3300005440 Bacteria 3529
32 Ga0070662_100000623 3300005457 Bacteria 21510
33 Ga0070662_100214102 3300005457 Bacteria 1535
34 Ga0070679_100007692 3300005530 Bacteria 10090
35 Ga0070684_100032751 3300005535 Bacteria 4433
36 Ga0070684_100036168 3300005535 Bacteria 4231
37 Ga0068853_100001009 3300005539 Bacteria 19829
38 Ga0068853_100019230 3300005539 Bacteria 5660
39 Ga0068853_100110179 3300005539 Bacteria 2445
40 Ga0070665_100011459 3300005548 Bacteria 8963
41 Ga0070665_100016996 3300005548 Bacteria 7294
42 Ga0068855_100051505 3300005563 Bacteria 4850
43 Ga0068855_100072806 3300005563 Bacteria 3993
44 Ga0068855_100083679 3300005563 Bacteria 3696
45 Ga0070664_100016679 3300005564 Bacteria 6023
46 Ga0070664_100031180 3300005564 Bacteria 4451
47 Ga0068854_100000646 3300005578 Bacteria 20689
48 Ga0068854_100006124 3300005578 Bacteria 7633
49 Ga0068856_100005343 3300005614 Bacteria 12678
50 Ga0068856_100015484 3300005614 Bacteria 7369
51 Ga0068852_100000148 3300005616 Bacteria 47327
52 Ga0068852_100015365 3300005616 Bacteria 5934
53 Ga0068859_100000452 3300005617 Bacteria 40834
54 Ga0068864_100005992 3300005618 Bacteria 9976
55 Ga0068861_100001980 3300005719 Bacteria 13225
56 Ga0068863_100000005 3300005841 Bacteria 269757
57 Ga0068863_100015980 3300005841 Bacteria 7199
58 Ga0068863_100072533 3300005841 Bacteria 3257
59 Ga0068858_100001141 3300005842 Bacteria 27483
60 Ga0068858_100006507 3300005842 Bacteria 11372
61 Ga0068860_100002654 3300005843 Bacteria 18612
62 Ga0068860_100005926 3300005843 Bacteria 12296
63 Ga0068862_100003386 3300005844 Bacteria 13753
64 Ga0068862_100088308 3300005844 Bacteria 2697
65 Ga0068862_100333900 3300005844 Bacteria 1402
66 Ga0075370_10004446 3300006353 Bacteria 6810
67 Ga0097620_100000452 3300006931 Bacteria 40834
68 Ga0079104_1003536 3300006946 Bacteria 7190
69 Ga0105251_10071377 3300009011 Bacteria 1615
70 Ga0105240_10067073 3300009093 Bacteria 4449
71 Ga0105247_10011462 3300009101 Bacteria 5344
72 Ga0105248_10004550 3300009177 Bacteria 15348
73 Ga0105248_10024675 3300009177 Bacteria 6686
74 Ga0105249_10001111 3300009553 Bacteria 23909
75 Ga0105249_10058061 3300009553 Bacteria 3547
76 Ga0105246_10000657 3300011119 Bacteria 19352
77 Ga0157373_10008156 3300013100 Bacteria 7786
78 Ga0157373_10019434 3300013100 Bacteria 4943
79 Ga0157371_10006275 3300013102 Bacteria 9844
80 Ga0157370_10007230 3300013104 Bacteria 12111
81 Ga0157370_10077969 3300013104 Bacteria 3120
82 Ga0157369_10021540 3300013105 Bacteria 7211
83 Ga0163162_10002299 3300013306 Bacteria 17941
84 Ga0157380_10149816 3300014326 Bacteria 2015
85 Ga0157379_10005111 3300014968 Bacteria 11250
86 Ga0207425_1000020 3300025245 Bacteria 372623
87 Ga0209129_1001936 3300025258 Bacteria 10848
88 Ga0209565_1000054 3300025263 Bacteria 206016
89 Ga0209676_1002560 3300025292 Bacteria 12580
90 Ga0209025_1001220 3300025294 Bacteria 35902
91 Ga0209564_1003268 3300025295 Bacteria 11307
92 Ga0209758_1000004 3300025297 Bacteria 1375322
93 Ga0209050_1000001 3300025298 Bacteria 3563507
94 Ga0209050_1008130 3300025298 Bacteria 5686
95 Ga0209051_1000764 3300025303 Bacteria 34225
96 Ga0207697_10000375 3300025315 Bacteria 25016
97 Ga0207713_1000285 3300025735 Bacteria 58553
98 Ga0207710_10006314 3300025900 Bacteria 5068
99 Ga0207680_10009879 3300025903 Bacteria 4752
100 Ga0207705_10000023 3300025909 Bacteria 301755
101 Ga0207705_10002193 3300025909 Bacteria 15100
102 Ga0207705_10051516 3300025909 Bacteria 2963
103 Ga0207705_10069583 3300025909 Bacteria 2549
104 Ga0207705_10168749 3300025909 Bacteria 1647
105 Ga0207660_10087906 3300025917 Bacteria 2297
106 Ga0207657_10000408 3300025919 Bacteria 45400
107 Ga0207657_10011494 3300025919 Bacteria 8790
108 Ga0207649_10006508 3300025920 Bacteria 6346
109 Ga0207649_10049351 3300025920 Bacteria 2599
110 Ga0207652_10000965 3300025921 Bacteria 26861
111 Ga0207652_10049517 3300025921 Bacteria 3597
112 Ga0207681_10000042 3300025923 Bacteria 137167
113 Ga0207681_10003752 3300025923 Bacteria 9446
114 Ga0207650_10008250 3300025925 Bacteria 7111
115 Ga0207650_10090082 3300025925 Bacteria 2342
116 Ga0207644_10000034 3300025931 Bacteria 132239
117 Ga0207644_10002253 3300025931 Bacteria 12512
118 Ga0207644_10004116 3300025931 Bacteria 9427
119 Ga0207690_10008675 3300025932 Bacteria 6029
120 Ga0207706_10001044 3300025933 Bacteria 28100
121 Ga0207706_10001544 3300025933 Bacteria 22792
122 Ga0207706_10291935 3300025933 Bacteria 1422
123 Ga0207711_10033283 3300025941 Bacteria 4360
124 Ga0207711_10052041 3300025941 Bacteria 3509
125 Ga0207661_10002230 3300025944 Bacteria 13366
126 Ga0207679_10019010 3300025945 Bacteria 4611
127 Ga0207667_10006434 3300025949 Bacteria 14223
128 Ga0207667_10007511 3300025949 Bacteria 13084
129 Ga0207667_10080229 3300025949 Bacteria 3381
130 Ga0207667_10204730 3300025949 Bacteria 2024
131 Ga0207667_10439124 3300025949 Bacteria 1327
132 Ga0207712_10075239 3300025961 Bacteria 2441
133 Ga0207668_10000668 3300025972 Bacteria 21067
134 Ga0207668_10004121 3300025972 Bacteria 8535
135 Ga0207668_10011588 3300025972 Bacteria 5364
136 Ga0207640_10000228 3300025981 Bacteria 39076
137 Ga0207658_10000344 3300025986 Bacteria 46055
138 Ga0207658_10001257 3300025986 Bacteria 20066
139 Ga0207703_10157458 3300026035 Bacteria 1986
140 Ga0207639_10002561 3300026041 Bacteria 12198
141 Ga0207639_10013774 3300026041 Bacteria 5670
142 Ga0207678_10048591 3300026067 Bacteria 3667
143 Ga0207702_10002132 3300026078 Bacteria 19041
144 Ga0207702_10008556 3300026078 Bacteria 8624
145 Ga0207641_10008917 3300026088 Bacteria 8286
146 Ga0207676_10002861 3300026095 Bacteria 12287
147 Ga0207676_10016236 3300026095 Bacteria 5391
148 Ga0207674_10035636 3300026116 Bacteria 5193
149 Ga0207674_10331375 3300026116 Bacteria 1472
150 Ga0207675_100000225 3300026118 Bacteria 53168
151 Ga0207698_10002113 3300026142 Bacteria 11716
152 Ga0207698_10073664 3300026142 Bacteria 2720
153 Ga0209281_1011524 3300027111 Bacteria 1977
154 Ga0268266_10008751 3300028379 Bacteria 8973
155 Ga0268266_10045584 3300028379 Bacteria 3751
156 Ga0268265_10000043 3300028380 Bacteria 186081
157 Ga0268265_10066556 3300028380 Bacteria 2785
158 Ga0268264_10000154 3300028381 Bacteria 156992
159 Ga0268264_10013637 3300028381 Bacteria 6688
160 Ga0268264_10048476 3300028381 Bacteria 3534
161 Ga0316579_10032825 3300031691 Bacteria 2382
162 Ga0307413_10149710 3300031824 Bacteria 1624
163 Ga0307412_10051275 3300031911 Bacteria 2726
164 Ga0307412_10061428 3300031911 Bacteria 2526
165 Ga0307414_10013517 3300032004 Bacteria 4863
166 Ga0307414_10027243 3300032004 Bacteria 3690
167 Ga0316582_0001464 3300036647 Bacteria 10381
168 Ga0451843_0042742 3300041509 Bacteria 1555
169 Ga0451576_0000588 3300045051 Bacteria 77026
170 Ga0451576_0050851 3300045051 Bacteria 4346
171 Ga0495627_000425 3300046453 Bacteria 36660
172 Ga0495650_0000652 3300046471 Bacteria 45732
173 Ga0495596_0001363 3300046500 Bacteria 14076
174 Ga0495596_0003543 3300046500 Bacteria 7866
175 Ga0495607_0089660 3300046501 Bacteria 1669
176 Ga0495610_0000033 3300046512 Bacteria 204151
177 Ga0495610_0000116 3300046512 Bacteria 90702
178 Ga0495610_0001115 3300046512 Bacteria 24470
179 Ga0495620_0033173 3300046515 Bacteria 2346
180 Ga0495632_0001393 3300046519 Bacteria 20281
181 Ga0495632_0011312 3300046519 Bacteria 5214
182 Ga0495643_0000048 3300046522 Bacteria 212788
183 Ga0495643_0010152 3300046522 Bacteria 5806
184 Ga0495654_0054246 3300046530 Bacteria 1945
185 Ga0495654_0081726 3300046530 Bacteria 1514
186 Ga0495609_0014541 3300046538 Bacteria 3697
187 Ga0495625_0003987 3300046660 Bacteria 14147
188 Ga0495625_0048177 3300046660 Bacteria 3070
189 Ga0495671_0012041 3300046692 Bacteria 4731
190 Ga0495681_0000041 3300047470 Bacteria 119251
191 Ga0495626_0000214 3300048091 Bacteria 69009
192 Ga0496100_0010242 3300048903 Bacteria 5302
193 Ga0496101_0275043 3300048904 Bacteria 1315
194 Ga0496102_0000267 3300048905 Bacteria 66761
195 Ga0496103_0000585 3300048906 Bacteria 28793
196 Ga0496103_0018942 3300048906 Bacteria 4133
197 Ga0496104_0000128 3300048907 Bacteria 70094
198 Ga0496104_0025808 3300048907 Bacteria 5419
199 Ga0496105_0000064 3300048908 Bacteria 83935
200 Ga0496105_0003875 3300048908 Bacteria 11182
201 Ga0496112_0037696 3300048915 Bacteria 4719
202 Ga0496113_0000417 3300048916 Bacteria 20659
203 Ga0496116_0098879 3300048919 Bacteria 1749
204 Ga0496117_0002326 3300048920 Bacteria 24324
205 Ga0496117_0166030 3300048920 Bacteria 1287
206 Ga0496118_0009715 3300048921 Bacteria 9656
207 Ga0496118_0030644 3300048921 Bacteria 4482
208 Ga0496119_0000077 3300048922 Bacteria 143108
209 Ga0496120_0001734 3300048923 Bacteria 24816
210 Ga0496121_0000017 3300048924 Bacteria 546415
211 Ga0496121_0000846 3300048924 Bacteria 55538
212 Ga0496121_0021389 3300048924 Bacteria 6338
213 Ga0496121_0031583 3300048924 Bacteria 4834
214 Ga0496122_0003369 3300048925 Bacteria 21037
215 Ga0496122_0110503 3300048925 Bacteria 1806
216 Ga0496123_0030294 3300048926 Bacteria 3963
217 Ga0496124_0003041 3300048927 Bacteria 20941
218 Ga0496125_0003202 3300048928 Bacteria 20208
219 Ga0496125_0025905 3300048928 Bacteria 5359
220 Ga0496125_0180311 3300048928 Bacteria 1408
221 Ga0496126_0000619 3300048929 Bacteria 66827
222 Ga0501034_0181881 3300049571 Bacteria 2067
223 Ga0501047_0038952 3300049581 Bacteria 4598
224 Ga0501224_001447 3300049664 Bacteria 3145
225 Ga0501044_0267599 3300049823 Bacteria 1646
226 nmdc:mga07m45_4584_c1 3300050496 Bacteria 6774
227 Ga0500643_000004 3300053087 Bacteria 857484
228 Ga0500643_004683 3300053087 Bacteria 6091
229 Ga0500556_0000049 3300053104 Bacteria 122572
230 Ga0500594_0004506 3300053118 Bacteria 3070
231 Ga0500618_010419 3300053125 Bacteria 2495
232 Ga0500559_0002429 3300053136 Bacteria 9641
233 Ga0500590_024170 3300053148 Bacteria 3153
234 Ga0500616_0003026 3300053153 Bacteria 13243
235 Ga0500622_0001542 3300053156 Bacteria 18258
236 Ga0500624_000194 3300053157 Bacteria 23992
237 Ga0500636_0003917 3300053177 Bacteria 8391
238 Ga0500636_0084110 3300053177 Bacteria 1830

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_0050851 Ga0451576_0050851_3222_4331 368
2 3300049823 Ga0501044_0267599 Ga0501044_0267599_95_1219 372
3 3300025298 Ga0209050_1000001 Ga0209050_10000012301 377
4 iso_pu_bacteria 2882806704 2882808479 378
5 3300013100 Ga0157373_10019434 Ga0157373_100194343 379
6 3300013104 Ga0157370_10007230 Ga0157370_100072309 379
7 3300025245 Ga0207425_1000020 Ga0207425_100002086 379
8 3300025297 Ga0209758_1000004 Ga0209758_1000004350 379
9 3300048928 Ga0496125_0025905 Ga0496125_0025905_1795_2940 380
10 iso_pu_bacteria 2848297114 2848299425 380
11 iso_pu_bacteria 2896253425 2896254641 380
12 iso_pu_bacteria 3000865235 3000866523 380
13 3300005327 Ga0070658_10182455 Ga0070658_101824552 381
14 3300005339 Ga0070660_100006721 Ga0070660_1000067216 381
15 3300005344 Ga0070661_100083835 Ga0070661_1000838353 381
16 3300005539 Ga0068853_100019230 Ga0068853_1000192304 381
17 3300025909 Ga0207705_10002193 Ga0207705_100021937 381
18 3300025909 Ga0207705_10168749 Ga0207705_101687492 381
19 3300025919 Ga0207657_10011494 Ga0207657_100114945 381
20 3300025920 Ga0207649_10049351 Ga0207649_100493512 381
21 3300025921 Ga0207652_10000965 Ga0207652_1000096523 381
22 3300025921 Ga0207652_10049517 Ga0207652_100495172 381
23 3300026041 Ga0207639_10013774 Ga0207639_100137745 381
24 3300026116 Ga0207674_10035636 Ga0207674_100356365 381
25 3300046692 Ga0495671_0012041 Ga0495671_0012041_3441_4589 381
26 3300053118 Ga0500594_0004506 Ga0500594_0004506_1680_2828 381
27 3300003771 Ga0055526_1004757 Ga0055526_10047577 382
28 3300003773 Ga0055537_1003082 Ga0055537_10030824 382
29 3300025263 Ga0209565_1000054 Ga0209565_1000054130 382
30 3300025292 Ga0209676_1002560 Ga0209676_100256011 382
31 3300025295 Ga0209564_1003268 Ga0209564_10032683 382
32 3300025298 Ga0209050_1008130 Ga0209050_10081305 382
33 3300025303 Ga0209051_1000764 Ga0209051_100076437 382
34 3300048928 Ga0496125_0180311 Ga0496125_0180311_80_1228 382
35 3300049571 Ga0501034_0181881 Ga0501034_0181881_867_2015 382
36 3300053087 Ga0500643_004683 Ga0500643_004683_26_1177 382
37 3300053125 Ga0500618_010419 Ga0500618_010419_1315_2463 382
38 3300053153 Ga0500616_0003026 Ga0500616_0003026_9125_10273 382
39 3300053157 Ga0500624_000194 Ga0500624_000194_20031_21179 382
40 3300053177 Ga0500636_0003917 Ga0500636_0003917_6946_8094 382
41 3300005327 Ga0070658_10000475 Ga0070658_1000047526 383
42 3300005335 Ga0070666_10230716 Ga0070666_102307161 383
43 3300005355 Ga0070671_100003467 Ga0070671_10000346710 383
44 3300005367 Ga0070667_100001326 Ga0070667_1000013263 383
45 3300005841 Ga0068863_100015980 Ga0068863_1000159803 383
46 3300005842 Ga0068858_100006507 Ga0068858_1000065074 383
47 3300005843 Ga0068860_100005926 Ga0068860_1000059262 383
48 3300005844 Ga0068862_100088308 Ga0068862_1000883082 383
49 3300009177 Ga0105248_10024675 Ga0105248_100246755 383
50 3300025735 Ga0207713_1000285 Ga0207713_100028594 383
51 3300025909 Ga0207705_10000023 Ga0207705_10000023146 383
52 3300025923 Ga0207681_10003752 Ga0207681_100037526 383
53 3300025925 Ga0207650_10090082 Ga0207650_100900822 383
54 3300025931 Ga0207644_10002253 Ga0207644_100022535 383
55 3300025941 Ga0207711_10052041 Ga0207711_100520413 383
56 3300025986 Ga0207658_10000344 Ga0207658_1000034439 383
57 3300027111 Ga0209281_1011524 Ga0209281_10115242 383
58 3300028380 Ga0268265_10066556 Ga0268265_100665563 383
59 3300028381 Ga0268264_10013637 Ga0268264_100136377 383
60 3300031911 Ga0307412_10051275 Ga0307412_100512752 383
61 3300046453 Ga0495627_000425 Ga0495627_000425_34437_35588 383
62 3300046471 Ga0495650_0000652 Ga0495650_0000652_1894_3045 383
63 3300046512 Ga0495610_0000033 Ga0495610_0000033_58179_59330 383
64 3300046512 Ga0495610_0000116 Ga0495610_0000116_6273_7424 383
65 3300046515 Ga0495620_0033173 Ga0495620_0033173_875_2026 383
66 3300046519 Ga0495632_0001393 Ga0495632_0001393_8561_9712 383
67 3300046522 Ga0495643_0000048 Ga0495643_0000048_88259_89410 383
68 3300046530 Ga0495654_0054246 Ga0495654_0054246_263_1414 383
69 3300047470 Ga0495681_0000041 Ga0495681_0000041_107622_108773 383
70 3300048904 Ga0496101_0275043 Ga0496101_0275043_24_1175 383
71 3300048906 Ga0496103_0018942 Ga0496103_0018942_1232_2383 383
72 3300048919 Ga0496116_0098879 Ga0496116_0098879_339_1490 383
73 3300048920 Ga0496117_0166030 Ga0496117_0166030_50_1201 383
74 3300048921 Ga0496118_0030644 Ga0496118_0030644_2036_3187 383
75 3300048924 Ga0496121_0021389 Ga0496121_0021389_4245_5396 383
76 3300048925 Ga0496122_0110503 Ga0496122_0110503_565_1716 383
77 3300048926 Ga0496123_0030294 Ga0496123_0030294_1114_2265 383
78 3300049664 Ga0501224_001447 Ga0501224_001447_159_1313 383
79 3300053104 Ga0500556_0000049 Ga0500556_0000049_45398_46552 383
80 3300002774 JGI25150J39212_1002251 JGI25150J39212_10022513 384
81 3300003215 JGI25153J46596_10000029 JGI25153J46596_10000029155 384
82 3300005329 Ga0070683_100033608 Ga0070683_1000336085 384
83 3300005335 Ga0070666_10000408 Ga0070666_1000040821 384
84 3300005337 Ga0070682_100103999 Ga0070682_1001039993 384
85 3300005347 Ga0070668_100058586 Ga0070668_1000585862 384
86 3300005353 Ga0070669_100000109 Ga0070669_10000010933 384
87 3300005367 Ga0070667_100024991 Ga0070667_1000249913 384
88 3300005440 Ga0070705_100020081 Ga0070705_1000200812 384
89 3300005457 Ga0070662_100000623 Ga0070662_1000006236 384
90 3300005457 Ga0070662_100214102 Ga0070662_1002141022 384
91 3300005535 Ga0070684_100032751 Ga0070684_1000327514 384
92 3300005548 Ga0070665_100016996 Ga0070665_1000169963 384
93 3300005563 Ga0068855_100083679 Ga0068855_1000836794 384
94 3300005564 Ga0070664_100016679 Ga0070664_1000166793 384
95 3300005617 Ga0068859_100000452 Ga0068859_10000045215 384
96 3300005618 Ga0068864_100005992 Ga0068864_1000059923 384
97 3300005719 Ga0068861_100001980 Ga0068861_1000019803 384
98 3300005841 Ga0068863_100072533 Ga0068863_1000725332 384
99 3300005842 Ga0068858_100001141 Ga0068858_10000114117 384
100 3300005843 Ga0068860_100002654 Ga0068860_10000265417 384
101 3300005844 Ga0068862_100003386 Ga0068862_10000338611 384
102 3300006353 Ga0075370_10004446 Ga0075370_100044462 384
103 3300006931 Ga0097620_100000452 Ga0097620_10000045215 384
104 3300006946 Ga0079104_1003536 Ga0079104_10035368 384
105 3300009101 Ga0105247_10011462 Ga0105247_100114622 384
106 3300009177 Ga0105248_10004550 Ga0105248_100045505 384
107 3300009553 Ga0105249_10001111 Ga0105249_1000111111 384
108 3300011119 Ga0105246_10000657 Ga0105246_1000065719 384
109 3300013100 Ga0157373_10008156 Ga0157373_100081566 384
110 3300013104 Ga0157370_10077969 Ga0157370_100779692 384
111 3300014326 Ga0157380_10149816 Ga0157380_101498162 384
112 3300014968 Ga0157379_10005111 Ga0157379_100051112 384
113 3300025258 Ga0209129_1001936 Ga0209129_10019362 384
114 3300025294 Ga0209025_1001220 Ga0209025_100122038 384
115 3300025315 Ga0207697_10000375 Ga0207697_1000037517 384
116 3300025900 Ga0207710_10006314 Ga0207710_100063142 384
117 3300025903 Ga0207680_10009879 Ga0207680_100098795 384
118 3300025923 Ga0207681_10000042 Ga0207681_10000042120 384
119 3300025925 Ga0207650_10008250 Ga0207650_100082504 384
120 3300025931 Ga0207644_10000034 Ga0207644_1000003433 384
121 3300025933 Ga0207706_10001044 Ga0207706_1000104420 384
122 3300025933 Ga0207706_10291935 Ga0207706_102919351 384
123 3300025941 Ga0207711_10033283 Ga0207711_100332833 384
124 3300025949 Ga0207667_10080229 Ga0207667_100802294 384
125 3300025961 Ga0207712_10075239 Ga0207712_100752392 384
126 3300025972 Ga0207668_10000668 Ga0207668_1000066811 384
127 3300026035 Ga0207703_10157458 Ga0207703_101574582 384
128 3300026067 Ga0207678_10048591 Ga0207678_100485914 384
129 3300026088 Ga0207641_10008917 Ga0207641_100089177 384
130 3300026095 Ga0207676_10002861 Ga0207676_100028613 384
131 3300026118 Ga0207675_100000225 Ga0207675_10000022528 384
132 3300028379 Ga0268266_10045584 Ga0268266_100455843 384
133 3300028380 Ga0268265_10000043 Ga0268265_1000004385 384
134 3300028381 Ga0268264_10000154 Ga0268264_1000015443 384
135 3300031691 Ga0316579_10032825 Ga0316579_100328251 384
136 3300031824 Ga0307413_10149710 Ga0307413_101497101 384
137 3300031911 Ga0307412_10061428 Ga0307412_100614283 384
138 3300036647 Ga0316582_0001464 Ga0316582_0001464_9045_10199 384
139 3300041509 Ga0451843_0042742 Ga0451843_0042742_241_1398 384
140 3300045051 Ga0451576_0000588 Ga0451576_0000588_1482_2663 384
141 3300046530 Ga0495654_0081726 Ga0495654_0081726_306_1460 384
142 3300046660 Ga0495625_0048177 Ga0495625_0048177_450_1604 384
143 3300050496 nmdc:mga07m45_4584_c1 nmdc:mga07m45_4584_c1_884_2038 384
144 3300053136 Ga0500559_0002429 Ga0500559_0002429_2050_3213 384
145 3300053156 Ga0500622_0001542 Ga0500622_0001542_9845_10999 384
146 3300053177 Ga0500636_0084110 Ga0500636_0084110_399_1559 384
147 iso_pu_bacteria 2738541275 2738709814 384
148 iso_pu_bacteria 2738541301 2738848239 384
149 iso_pu_bacteria 2738541304 2738863968 384
150 iso_pu_bacteria 2738543022 2739296486 384
151 iso_pu_bacteria 2738543033 2739358164 384
152 iso_pu_bacteria 2896184354 2896186897 384
153 iso_pu_bacteria 2928959182 2928960217 384
154 3300005289 Ga0065704_10072112 Ga0065704_100721123 387
155 3300005347 Ga0070668_100042651 Ga0070668_1000426513 387
156 3300005367 Ga0070667_100134977 Ga0070667_1001349772 387
157 3300025972 Ga0207668_10011588 Ga0207668_100115884 387
158 3300048924 Ga0496121_0000846 Ga0496121_0000846_4884_6065 387
159 3300005327 Ga0070658_10070331 Ga0070658_100703313 388
160 3300005563 Ga0068855_100051505 Ga0068855_1000515055 388
161 3300005578 Ga0068854_100000646 Ga0068854_10000064617 388
162 3300005614 Ga0068856_100005343 Ga0068856_1000053436 388
163 3300005616 Ga0068852_100000148 Ga0068852_10000014820 388
164 3300005616 Ga0068852_100015365 Ga0068852_1000153657 388
165 3300005841 Ga0068863_100000005 Ga0068863_100000005109 388
166 3300009011 Ga0105251_10071377 Ga0105251_100713771 388
167 3300009093 Ga0105240_10067073 Ga0105240_100670734 388
168 3300025909 Ga0207705_10051516 Ga0207705_100515164 388
169 3300025949 Ga0207667_10007511 Ga0207667_100075118 388
170 3300025949 Ga0207667_10204730 Ga0207667_102047302 388
171 3300025949 Ga0207667_10439124 Ga0207667_104391241 388
172 3300025981 Ga0207640_10000228 Ga0207640_100002285 388
173 3300026078 Ga0207702_10002132 Ga0207702_100021326 388
174 3300026095 Ga0207676_10016236 Ga0207676_100162364 388
175 3300026142 Ga0207698_10002113 Ga0207698_100021136 388
176 3300026142 Ga0207698_10073664 Ga0207698_100736643 388
177 3300032004 Ga0307414_10013517 Ga0307414_100135173 388
178 3300032004 Ga0307414_10027243 Ga0307414_100272431 388
179 3300046500 Ga0495596_0001363 Ga0495596_0001363_304_1470 388
180 3300046500 Ga0495596_0003543 Ga0495596_0003543_6656_7822 388
181 3300046501 Ga0495607_0089660 Ga0495607_0089660_358_1524 388
182 3300046512 Ga0495610_0001115 Ga0495610_0001115_14184_15350 388
183 3300046519 Ga0495632_0011312 Ga0495632_0011312_1141_2307 388
184 3300046538 Ga0495609_0014541 Ga0495609_0014541_333_1499 388
185 3300046660 Ga0495625_0003987 Ga0495625_0003987_3079_4245 388
186 3300048091 Ga0495626_0000214 Ga0495626_0000214_36499_37665 388
187 3300048907 Ga0496104_0025808 Ga0496104_0025808_1703_2881 388
188 3300048908 Ga0496105_0003875 Ga0496105_0003875_538_1716 388
189 3300049581 Ga0501047_0038952 Ga0501047_0038952_2792_3964 388
190 3300053148 Ga0500590_024170 Ga0500590_024170_869_2077 388
191 3300048924 Ga0496121_0000017 Ga0496121_0000017_81500_82675 391
192 3300053087 Ga0500643_000004 Ga0500643_000004_167314_168501 393
193 3300046522 Ga0495643_0010152 Ga0495643_0010152_2453_3643 395
194 3300005327 Ga0070658_10001814 Ga0070658_100018144 397
195 3300005329 Ga0070683_100009121 Ga0070683_10000912110 397
196 3300005336 Ga0070680_100001532 Ga0070680_1000015326 397
197 3300005337 Ga0070682_100082666 Ga0070682_1000826662 397
198 3300005339 Ga0070660_100036832 Ga0070660_1000368323 397
199 3300005366 Ga0070659_100105552 Ga0070659_1001055522 397
200 3300005535 Ga0070684_100036168 Ga0070684_1000361685 397
201 3300005563 Ga0068855_100072806 Ga0068855_1000728063 397
202 3300005564 Ga0070664_100031180 Ga0070664_1000311804 397
203 3300005578 Ga0068854_100006124 Ga0068854_1000061246 397
204 3300005614 Ga0068856_100015484 Ga0068856_1000154846 397
205 3300025909 Ga0207705_10069583 Ga0207705_100695831 397
206 3300025917 Ga0207660_10087906 Ga0207660_100879062 397
207 3300025919 Ga0207657_10000408 Ga0207657_1000040823 397
208 3300025920 Ga0207649_10006508 Ga0207649_100065083 397
209 3300025932 Ga0207690_10008675 Ga0207690_100086754 397
210 3300025933 Ga0207706_10001544 Ga0207706_1000154411 397
211 3300025944 Ga0207661_10002230 Ga0207661_1000223014 397
212 3300025949 Ga0207667_10006434 Ga0207667_100064346 397
213 3300026078 Ga0207702_10008556 Ga0207702_100085565 397
214 3300005530 Ga0070679_100007692 Ga0070679_10000769212 398
215 3300005539 Ga0068853_100001009 Ga0068853_1000010092 398
216 3300013102 Ga0157371_10006275 Ga0157371_100062755 398
217 3300013105 Ga0157369_10021540 Ga0157369_100215405 398
218 3300025945 Ga0207679_10019010 Ga0207679_100190104 398
219 3300026041 Ga0207639_10002561 Ga0207639_100025615 398
220 3300026116 Ga0207674_10331375 Ga0207674_103313751 402
221 3300005539 Ga0068853_100110179 Ga0068853_1001101793 403
222 iso_pu_bacteria 2928100450 2928101371 403
223 2162886007 SwRhRL2b_contig_617173 SwRhRL2b_0077.00004240 413
224 3300005353 Ga0070669_100000184 Ga0070669_10000018441 413
225 3300005355 Ga0070671_100018367 Ga0070671_1000183673 413
226 3300005548 Ga0070665_100011459 Ga0070665_1000114593 413
227 3300005844 Ga0068862_100333900 Ga0068862_1003339001 413
228 3300009553 Ga0105249_10058061 Ga0105249_100580612 413
229 3300013306 Ga0163162_10002299 Ga0163162_1000229916 413
230 3300025931 Ga0207644_10004116 Ga0207644_100041162 413
231 3300025972 Ga0207668_10004121 Ga0207668_100041214 413
232 3300025986 Ga0207658_10001257 Ga0207658_100012573 413
233 3300028379 Ga0268266_10008751 Ga0268266_100087513 413
234 3300028381 Ga0268264_10048476 Ga0268264_100484762 413
235 3300048903 Ga0496100_0010242 Ga0496100_0010242_3965_5206 413
236 3300048905 Ga0496102_0000267 Ga0496102_0000267_48339_49580 413
237 3300048906 Ga0496103_0000585 Ga0496103_0000585_17327_18568 413
238 3300048907 Ga0496104_0000128 Ga0496104_0000128_59794_61035 413
239 3300048908 Ga0496105_0000064 Ga0496105_0000064_8009_9250 413
240 3300048915 Ga0496112_0037696 Ga0496112_0037696_2743_3984 413
241 3300048916 Ga0496113_0000417 Ga0496113_0000417_2175_3416 413
242 3300048920 Ga0496117_0002326 Ga0496117_0002326_9682_10923 413
243 3300048921 Ga0496118_0009715 Ga0496118_0009715_2224_3465 413
244 3300048922 Ga0496119_0000077 Ga0496119_0000077_14618_15859 413
245 3300048923 Ga0496120_0001734 Ga0496120_0001734_6265_7506 413
246 3300048924 Ga0496121_0031583 Ga0496121_0031583_3187_4428 413
247 3300048925 Ga0496122_0003369 Ga0496122_0003369_2625_3866 413
248 3300048927 Ga0496124_0003041 Ga0496124_0003041_8070_9311 413
249 3300048928 Ga0496125_0003202 Ga0496125_0003202_1719_2960 413
250 3300048929 Ga0496126_0000619 Ga0496126_0000619_48338_49579 413

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00534

Glycos_transf_1

Glycosyl transferases group 1

234

397

0.96

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

60

227

0.96

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

247

383

0.91

PF13524

Glyco_trans_1_2

Glycosyl transferases group 1

264

412

0.85

PF13579

Glyco_trans_4_4

Glycosyl transferase 4-like domain

61

216

0.78

PF20706

GT4-conflict

Family 4 Glycosyltransferase in conflict systems

61

410

0.61

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8557 236 389
5i45-assembly1.cif.gz_A 1.35 angstrom crystal structure of c-terminal domain of glycosyl transferase group 1 family protein (lpcc) from francisella tularensis. 0.8458 210 388
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8262 236 389
6lfl-assembly1.cif.gz_A crystal structure of a class a gpcr 0.8213 210 389
5d01-assembly1.cif.gz_B crystal structure of bsha from b. subtilis complexed with n-acetylglucosaminyl-malate 0.8165 35 405
ID Description Score Start End Superfamily
af_Q84QB1_230_385_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9052 234 387 3.40.50.2000
af_Q9SSP6_536_651_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9051 294 388 3.40.50.2000
5d00A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8952 224 382 3.40.50.2000
af_P9WMY5_198_350_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8892 222 385 3.40.50.2000
af_Q84QB1_230_385_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8887 234 387 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A7W1QFI6-F1-model_v4 Glycosyltransferase family 4 protein 0.9673 302 388 GO:0016757
AF-A0A7Y5LRA4-F1-model_v4 Glycosyltransferase family 1 protein 0.9536 5 409 GO:0016757
AF-A0A7X6A563-F1-model_v4 Phosphatidylinositol alpha 1,6-mannosyltransferase (EC 2.4.1.-) 0.9373 35 411 GO:0009058
GO:0016758
AF-A0A645I0Z0-F1-model_v4 GDP-mannose-dependent alpha-mannosyltransferase (EC 2.4.1.-) 0.9354 267 391 GO:0016757
AF-A0A7Y5LRA4-F1-model_v4 Glycosyltransferase family 1 protein 0.935 5 409 GO:0016757

Feature Viewer

pLDDT pTM Quality
88.23 0.84 High
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Predicted Structure (AlphaFold2)

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