F360965

General Info

Members Datasets Scaffolds Average Seq Length
249 168 498 247

Family's Representative Sequence

Representative Sequence 3300044842|Ga0466957_0000073|Ga0466957_0000073_15266_16087
Length 273
Sequence MLPSATEKLNGFAFGNSPQNRKYIIMNRIIISCMAMLCAFTLPPKKKIRVWLIGDSTMSVKETKAYPETGWGMPFVYFFDSTVTVDNRAQNGRSTRTFMAENRWQPVVNAMQEGDYVFIQFGHNDEVSTKKSYTTEAEFKTNLLKYVNDTRSKKGNPILLTPVARRKFDSTGHVAGTHDVYAQIVRDVAKETNVPLIDLDKKGQALLQQFGEEKSKLLFNQLAPGEHPNYPNGKDDNTHFNELGARMVAEIVLKEVRELHLELADRIVVGTMK

Samples

Sample ID Description Type Environment
1 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
106 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
107 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
108 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
109 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
110 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
111 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
112 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
115 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
116 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
121 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
138 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
139 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
140 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
141 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
142 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
143 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
144 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
145 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
146 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
147 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
152 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
156 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
157 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
158 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
159 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
161 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
162 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 2738541278 Niastella sp. CF465 Isolate Unclassified
166 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
167 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
168 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.39
Metatranscriptomes 0
Isolates 1.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.43
Nodule 0
Rhizoplane 0.4
Rhizosphere 89.56
Stem 0
Stem Tuber 0
Unclassified 14.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466957_0000073 3300044842 Bacteria 39412
2 rootH1_10017193 3300003323 Bacteria 31677
3 rootH1_10302783 3300003323 Bacteria 2552
4 Ga0065714_10080776 3300005288 Bacteria 2416
5 Ga0070658_10129743 3300005327 Bacteria 2100
6 Ga0070683_100074505 3300005329 Bacteria 3171
7 Ga0070670_100035043 3300005331 Bacteria 4320
8 Ga0070670_100176526 3300005331 Unclassified 1854
9 Ga0070670_100235834 3300005331 Bacteria 1593
10 Ga0068869_100030136 3300005334 Bacteria 3806
11 Ga0068869_100219292 3300005334 Unclassified 1507
12 Ga0068868_100070886 3300005338 Bacteria 2779
13 Ga0070689_100027613 3300005340 Bacteria 4279
14 Ga0070669_100673449 3300005353 Bacteria 872
15 Ga0070675_100067604 3300005354 Bacteria 2957
16 Ga0070671_100242344 3300005355 Bacteria 1531
17 Ga0070674_100150977 3300005356 Bacteria 1753
18 Ga0070673_100128926 3300005364 Bacteria 2120
19 Ga0070673_100264086 3300005364 Bacteria 1505
20 Ga0070688_100001577 3300005365 Bacteria 11378
21 Ga0070662_100286900 3300005457 Bacteria 1333
22 Ga0068867_100454782 3300005459 Bacteria 1092
23 Ga0070685_10042123 3300005466 Bacteria 2604
24 Ga0070685_10118773 3300005466 Bacteria 1639
25 Ga0070698_100000935 3300005471 Bacteria 31956
26 Ga0070698_100007253 3300005471 Bacteria 12007
27 Ga0070698_100029607 3300005471 Bacteria 5685
28 Ga0070698_100371056 3300005471 Bacteria 1363
29 Ga0068853_100194396 3300005539 Bacteria 1844
30 Ga0068853_100962081 3300005539 Bacteria 821
31 Ga0070672_100012563 3300005543 Bacteria 5952
32 Ga0070672_100338125 3300005543 Bacteria 1281
33 Ga0070693_100262953 3300005547 Bacteria 1148
34 Ga0068855_100008590 3300005563 Bacteria 12346
35 Ga0068855_100201908 3300005563 Bacteria 2238
36 Ga0068855_100295688 3300005563 Unclassified 1794
37 Ga0068859_100560707 3300005617 Bacteria 1236
38 Ga0068859_100683193 3300005617 Unclassified 1118
39 Ga0068864_100075639 3300005618 Bacteria 2940
40 Ga0068866_10385317 3300005718 Bacteria 900
41 Ga0068861_100134959 3300005719 Unclassified 2007
42 Ga0068861_100369292 3300005719 Bacteria 1264
43 Ga0068863_100001430 3300005841 Bacteria 23658
44 Ga0068863_100006981 3300005841 Bacteria 11073
45 Ga0068863_100148137 3300005841 Bacteria 2246
46 Ga0068863_100474784 3300005841 Unclassified 1229
47 Ga0068858_100175547 3300005842 Unclassified 2022
48 Ga0068860_100001534 3300005843 Bacteria 24870
49 Ga0068860_100069386 3300005843 Bacteria 3350
50 Ga0068862_100696953 3300005844 Bacteria 983
51 Ga0075366_10014969 3300006195 Bacteria 4436
52 Ga0075366_10108469 3300006195 Unclassified 1669
53 Ga0097621_100089362 3300006237 Bacteria 2575
54 Ga0068871_100013665 3300006358 Bacteria 6032
55 Ga0068871_100384487 3300006358 Bacteria 1247
56 Ga0068871_100443185 3300006358 Bacteria 1163
57 Ga0068871_100518648 3300006358 Bacteria 1076
58 Ga0075428_100642141 3300006844 Bacteria 1132
59 Ga0068865_100072119 3300006881 Bacteria 2452
60 Ga0068865_100090900 3300006881 Bacteria 2214
61 Ga0097620_100560725 3300006931 Bacteria 1236
62 Ga0097620_100683113 3300006931 Unclassified 1118
63 Ga0105240_10073284 3300009093 Bacteria 4228
64 Ga0111539_10150066 3300009094 Bacteria 2728
65 Ga0111539_10257033 3300009094 Bacteria 2034
66 Ga0105245_10229730 3300009098 Bacteria 1794
67 Ga0105245_10328245 3300009098 Bacteria 1509
68 Ga0114129_10005171 3300009147 Bacteria 18363
69 Ga0105243_10137736 3300009148 Bacteria 2079
70 Ga0105241_10027869 3300009174 Bacteria 4207
71 Ga0105241_10138309 3300009174 Unclassified 1980
72 Ga0105242_10003349 3300009176 Bacteria 12467
73 Ga0105242_10231151 3300009176 Unclassified 1657
74 Ga0105242_10260857 3300009176 Bacteria 1565
75 Ga0105237_10094449 3300009545 Unclassified 2980
76 Ga0105249_10001277 3300009553 Bacteria 22079
77 Ga0105249_10377117 3300009553 Bacteria 1443
78 Ga0105249_10656821 3300009553 Bacteria 1106
79 Ga0105239_10007195 3300010375 Bacteria 12794
80 Ga0157373_10000083 3300013100 Bacteria 81952
81 Ga0157371_10087971 3300013102 Bacteria 2199
82 Ga0157370_10013804 3300013104 Bacteria 8298
83 Ga0157370_10536755 3300013104 Bacteria 1073
84 Ga0157374_10157980 3300013296 Bacteria 2207
85 Ga0157378_10003239 3300013297 Bacteria 14486
86 Ga0157378_10017583 3300013297 Bacteria 6278
87 Ga0157378_10026197 3300013297 Bacteria 5140
88 Ga0157378_10171645 3300013297 Bacteria 2034
89 Ga0157378_10184622 3300013297 Bacteria 1963
90 Ga0157378_10637929 3300013297 Bacteria 1080
91 Ga0163162_10261731 3300013306 Bacteria 1862
92 Ga0163162_10625357 3300013306 Bacteria 1202
93 Ga0163162_11227890 3300013306 Bacteria 851
94 Ga0163162_11377473 3300013306 Unclassified 802
95 Ga0157372_10007138 3300013307 Bacteria 11891
96 Ga0157372_10068089 3300013307 Bacteria 4003
97 Ga0157372_10074150 3300013307 Bacteria 3837
98 Ga0157372_10216570 3300013307 Bacteria 2219
99 Ga0157375_10115525 3300013308 Bacteria 2787
100 Ga0157375_10354755 3300013308 Bacteria 1633
101 Ga0163163_10284063 3300014325 Bacteria 1707
102 Ga0163163_10852701 3300014325 Unclassified 974
103 Ga0157380_10311392 3300014326 Bacteria 1455
104 Ga0157380_10515979 3300014326 Bacteria 1164
105 Ga0157377_10018059 3300014745 Bacteria 3660
106 Ga0157376_10031374 3300014969 Bacteria 4254
107 Ga0157376_10604888 3300014969 Bacteria 1091
108 Ga0157376_10877367 3300014969 Bacteria 914
109 Ga0213876_10164597 3300021384 Unclassified 1180
110 Ga0207688_10020933 3300025901 Bacteria 3570
111 Ga0207680_10000120 3300025903 Bacteria 36545
112 Ga0207645_10006873 3300025907 Bacteria 8118
113 Ga0207643_10095198 3300025908 Bacteria 1740
114 Ga0207705_10152266 3300025909 Bacteria 1733
115 Ga0207671_10001247 3300025914 Bacteria 29996
116 Ga0207671_10258374 3300025914 Unclassified 1370
117 Ga0207662_10089691 3300025918 Bacteria 1889
118 Ga0207681_10314442 3300025923 Bacteria 1243
119 Ga0207650_10078354 3300025925 Bacteria 2500
120 Ga0207650_10625211 3300025925 Unclassified 907
121 Ga0207659_10393305 3300025926 Bacteria 1158
122 Ga0207644_10153491 3300025931 Bacteria 1784
123 Ga0207686_10085187 3300025934 Bacteria 2072
124 Ga0207670_10060419 3300025936 Bacteria 2582
125 Ga0207669_10051948 3300025937 Unclassified 2459
126 Ga0207704_10029901 3300025938 Unclassified 3046
127 Ga0207691_10007108 3300025940 Bacteria 10807
128 Ga0207691_10017553 3300025940 Bacteria 6783
129 Ga0207689_10026959 3300025942 Bacteria 4810
130 Ga0207689_10077110 3300025942 Bacteria 2740
131 Ga0207661_10171117 3300025944 Bacteria 1891
132 Ga0207679_10028309 3300025945 Bacteria 3886
133 Ga0207667_10034444 3300025949 Bacteria 5437
134 Ga0207667_10058252 3300025949 Bacteria 4053
135 Ga0207651_10001621 3300025960 Bacteria 10325
136 Ga0207651_10028643 3300025960 Bacteria 3517
137 Ga0207712_10002628 3300025961 Bacteria 11509
138 Ga0207712_10336211 3300025961 Bacteria 1251
139 Ga0207668_10625551 3300025972 Bacteria 940
140 Ga0207658_10130474 3300025986 Bacteria 2018
141 Ga0207639_10037104 3300026041 Bacteria 3618
142 Ga0207639_10375647 3300026041 Unclassified 1275
143 Ga0207641_10001343 3300026088 Bacteria 24358
144 Ga0207641_10001908 3300026088 Bacteria 20026
145 Ga0207641_10063305 3300026088 Bacteria 3159
146 Ga0207641_10099641 3300026088 Bacteria 2557
147 Ga0207641_10949392 3300026088 Bacteria 855
148 Ga0207648_10118940 3300026089 Bacteria 2322
149 Ga0207648_10157802 3300026089 Bacteria 2003
150 Ga0207676_10218767 3300026095 Unclassified 1695
151 Ga0207676_10441200 3300026095 Bacteria 1225
152 Ga0207675_100182193 3300026118 Unclassified 2011
153 Ga0207675_100202727 3300026118 Unclassified 1906
154 Ga0207675_100471909 3300026118 Unclassified 1246
155 Ga0207683_10461343 3300026121 Bacteria 1172
156 Ga0209984_1007944 3300027424 Bacteria 1327
157 Ga0207428_10136951 3300027907 Bacteria 1871
158 Ga0268265_10152369 3300028380 Bacteria 1952
159 Ga0268265_10222644 3300028380 Bacteria 1652
160 Ga0268264_10002898 3300028381 Bacteria 14907
161 Ga0307515_10048090 3300028794 Bacteria 6459
162 Ga0307515_10056879 3300028794 Bacteria 5673
163 Ga0307513_10058028 3300031456 Bacteria 4118
164 Ga0307509_10187267 3300031507 Bacteria 1926
165 Ga0307410_10229000 3300031852 Bacteria 1434
166 Ga0307406_10628152 3300031901 Bacteria 889
167 Ga0307416_100494278 3300032002 Bacteria 1286
168 Ga0373927_0080304 3300035695 Unclassified 2114
169 Ga0395900_0333695 3300037418 Bacteria 1494
170 Ga0395905_0002019 3300037471 Bacteria 23194
171 Ga0395905_0090942 3300037471 Bacteria 2861
172 Ga0436365_1636846 3300039437 Unclassified 2016
173 Ga0439436_0014683 3300041404 Unclassified 2360
174 Ga0451807_0011282 3300041486 Bacteria 5292
175 Ga0439449_0023193 3300042007 Bacteria 2322
176 Ga0439449_0028990 3300042007 Unclassified 2063
177 Ga0439449_0110651 3300042007 Bacteria 1017
178 Ga0439457_000541 3300042014 Bacteria 11021
179 Ga0439462_0033373 3300042015 Bacteria 1365
180 Ga0450898_002074 3300042134 Bacteria 2756
181 Ga0450899_000913 3300042135 Unclassified 3355
182 Ga0466969_0008560 3300044656 Bacteria 5428
183 Ga0466972_0000007 3300044658 Bacteria 277010
184 Ga0466965_0246351 3300044683 Bacteria 958
185 Ga0466966_0048561 3300044684 Bacteria 2703
186 Ga0466964_0057117 3300044706 Bacteria 1615
187 Ga0466959_0061319 3300045049 Bacteria 2734
188 Ga0495638_0077084 3300046460 Bacteria 2030
189 Ga0495630_0161305 3300046517 Bacteria 1707
190 Ga0495668_0000918 3300046616 Bacteria 32911
191 Ga0495668_0001235 3300046616 Bacteria 25682
192 Ga0495625_0036180 3300046660 Bacteria 3631
193 Ga0495686_0001452 3300047472 Bacteria 25815
194 Ga0501300_016515 3300049523 Unclassified 1078
195 Ga0501032_0003268 3300049569 Bacteria 12478
196 Ga0501034_0025738 3300049571 Bacteria 5992
197 Ga0501036_0172612 3300049572 Bacteria 1821
198 Ga0501038_0034682 3300049574 Bacteria 4436
199 Ga0501043_0016763 3300049579 Bacteria 5741
200 Ga0501046_0028303 3300049580 Bacteria 4565
201 Ga0501047_0026372 3300049581 Bacteria 5591
202 Ga0501048_0011660 3300049582 Bacteria 6555
203 Ga0501067_0018811 3300049583 Bacteria 3824
204 Ga0501070_0005025 3300049586 Bacteria 11283
205 Ga0501072_0272560 3300049588 Unclassified 1346
206 Ga0501073_0010657 3300049589 Bacteria 6729
207 Ga0501074_0003012 3300049590 Bacteria 11859
208 Ga0501202_029124 3300049652 Bacteria 1143
209 Ga0501206_016767 3300049653 Unclassified 1021
210 Ga0501217_000290 3300049661 Bacteria 7888
211 Ga0501223_009646 3300049663 Bacteria 1951
212 Ga0501240_025119 3300049673 Bacteria 923
213 Ga0501257_036959 3300049686 Bacteria 1190
214 Ga0501219_000436 3300049703 Bacteria 6791
215 Ga0501221_000267 3300049704 Bacteria 7736
216 Ga0501225_0019839 3300049705 Bacteria 1858
217 Ga0501234_002273 3300049707 Bacteria 3036
218 Ga0501079_0073598 3300049741 Bacteria 2641
219 Ga0501080_0083384 3300049742 Bacteria 2969
220 Ga0501035_0012694 3300049822 Bacteria 7784
221 Ga0501035_0577945 3300049822 Bacteria 918
222 Ga0501044_0008346 3300049823 Bacteria 11355
223 Ga0501044_0020959 3300049823 Bacteria 6979
224 Ga0501284_00172 3300050005 Bacteria 5569
225 nmdc:mga0k408_10507_c1 3300050493 Bacteria 5007
226 nmdc:mga0k408_136964_c1 3300050493 Unclassified 1455
227 nmdc:mga0k408_286833_c1 3300050493 Bacteria 982
228 nmdc:mga0k408_30928_c1 3300050493 Bacteria 3054
229 nmdc:mga0k408_679_c1 3300050493 Bacteria 18667
230 nmdc:mga05p37_6736_c1 3300050507 Bacteria 13545
231 nmdc:mga08y16_157112_c1 3300050511 Bacteria 2363
232 nmdc:mga08y16_225056_c1 3300050511 Bacteria 1941
233 nmdc:mga08y16_450068_c1 3300050511 Bacteria 1313
234 nmdc:mga08y16_742673_c1 3300050511 Bacteria 978
235 Ga0500646_0011658 3300053090 Bacteria 2263
236 Ga0500583_0002361 3300053092 Bacteria 5653
237 Ga0500641_0079366 3300053096 Bacteria 1391
238 Ga0500642_0041532 3300053130 Unclassified 1989
239 Ga0500568_0001958 3300053139 Bacteria 12605
240 Ga0500616_0000853 3300053153 Bacteria 33843
241 Ga0500616_0004958 3300053153 Bacteria 9236
242 Ga0500622_0049980 3300053156 Unclassified 2155
243 Ga0500611_000070 3300053727 Bacteria 41745
244 Ga0501084_0109103 3300054114 Bacteria 2325
245 Ga0501082_0190202 3300060353 Bacteria 1786
246 2738724298 2738541278 Bacteria 9755573
247 2896114121 2896109856 Bacteria 7140722
248 2896320236 2896317667 Bacteria 4606601
249 2896345241 2896344016 Bacteria 3811746
250 Ga0466957_0000073
251 rootH1_10017193
252 rootH1_10302783
253 Ga0065714_10080776
254 Ga0070658_10129743
255 Ga0070683_100074505
256 Ga0070670_100035043
257 Ga0070670_100176526
258 Ga0070670_100235834
259 Ga0068869_100030136
260 Ga0068869_100219292
261 Ga0068868_100070886
262 Ga0070689_100027613
263 Ga0070669_100673449
264 Ga0070675_100067604
265 Ga0070671_100242344
266 Ga0070674_100150977
267 Ga0070673_100128926
268 Ga0070673_100264086
269 Ga0070688_100001577
270 Ga0070662_100286900
271 Ga0068867_100454782
272 Ga0070685_10042123
273 Ga0070685_10118773
274 Ga0070698_100000935
275 Ga0070698_100007253
276 Ga0070698_100029607
277 Ga0070698_100371056
278 Ga0068853_100194396
279 Ga0068853_100962081
280 Ga0070672_100012563
281 Ga0070672_100338125
282 Ga0070693_100262953
283 Ga0068855_100008590
284 Ga0068855_100201908
285 Ga0068855_100295688
286 Ga0068859_100560707
287 Ga0068859_100683193
288 Ga0068864_100075639
289 Ga0068866_10385317
290 Ga0068861_100134959
291 Ga0068861_100369292
292 Ga0068863_100001430
293 Ga0068863_100006981
294 Ga0068863_100148137
295 Ga0068863_100474784
296 Ga0068858_100175547
297 Ga0068860_100001534
298 Ga0068860_100069386
299 Ga0068862_100696953
300 Ga0075366_10014969
301 Ga0075366_10108469
302 Ga0097621_100089362
303 Ga0068871_100013665
304 Ga0068871_100384487
305 Ga0068871_100443185
306 Ga0068871_100518648
307 Ga0075428_100642141
308 Ga0068865_100072119
309 Ga0068865_100090900
310 Ga0097620_100560725
311 Ga0097620_100683113
312 Ga0105240_10073284
313 Ga0111539_10150066
314 Ga0111539_10257033
315 Ga0105245_10229730
316 Ga0105245_10328245
317 Ga0114129_10005171
318 Ga0105243_10137736
319 Ga0105241_10027869
320 Ga0105241_10138309
321 Ga0105242_10003349
322 Ga0105242_10231151
323 Ga0105242_10260857
324 Ga0105237_10094449
325 Ga0105249_10001277
326 Ga0105249_10377117
327 Ga0105249_10656821
328 Ga0105239_10007195
329 Ga0157373_10000083
330 Ga0157371_10087971
331 Ga0157370_10013804
332 Ga0157370_10536755
333 Ga0157374_10157980
334 Ga0157378_10003239
335 Ga0157378_10017583
336 Ga0157378_10026197
337 Ga0157378_10171645
338 Ga0157378_10184622
339 Ga0157378_10637929
340 Ga0163162_10261731
341 Ga0163162_10625357
342 Ga0163162_11227890
343 Ga0163162_11377473
344 Ga0157372_10007138
345 Ga0157372_10068089
346 Ga0157372_10074150
347 Ga0157372_10216570
348 Ga0157375_10115525
349 Ga0157375_10354755
350 Ga0163163_10284063
351 Ga0163163_10852701
352 Ga0157380_10311392
353 Ga0157380_10515979
354 Ga0157377_10018059
355 Ga0157376_10031374
356 Ga0157376_10604888
357 Ga0157376_10877367
358 Ga0213876_10164597
359 Ga0207688_10020933
360 Ga0207680_10000120
361 Ga0207645_10006873
362 Ga0207643_10095198
363 Ga0207705_10152266
364 Ga0207671_10001247
365 Ga0207671_10258374
366 Ga0207662_10089691
367 Ga0207681_10314442
368 Ga0207650_10078354
369 Ga0207650_10625211
370 Ga0207659_10393305
371 Ga0207644_10153491
372 Ga0207686_10085187
373 Ga0207670_10060419
374 Ga0207669_10051948
375 Ga0207704_10029901
376 Ga0207691_10007108
377 Ga0207691_10017553
378 Ga0207689_10026959
379 Ga0207689_10077110
380 Ga0207661_10171117
381 Ga0207679_10028309
382 Ga0207667_10034444
383 Ga0207667_10058252
384 Ga0207651_10001621
385 Ga0207651_10028643
386 Ga0207712_10002628
387 Ga0207712_10336211
388 Ga0207668_10625551
389 Ga0207658_10130474
390 Ga0207639_10037104
391 Ga0207639_10375647
392 Ga0207641_10001343
393 Ga0207641_10001908
394 Ga0207641_10063305
395 Ga0207641_10099641
396 Ga0207641_10949392
397 Ga0207648_10118940
398 Ga0207648_10157802
399 Ga0207676_10218767
400 Ga0207676_10441200
401 Ga0207675_100182193
402 Ga0207675_100202727
403 Ga0207675_100471909
404 Ga0207683_10461343
405 Ga0209984_1007944
406 Ga0207428_10136951
407 Ga0268265_10152369
408 Ga0268265_10222644
409 Ga0268264_10002898
410 Ga0307515_10048090
411 Ga0307515_10056879
412 Ga0307513_10058028
413 Ga0307509_10187267
414 Ga0307410_10229000
415 Ga0307406_10628152
416 Ga0307416_100494278
417 Ga0373927_0080304
418 Ga0395900_0333695
419 Ga0395905_0002019
420 Ga0395905_0090942
421 Ga0436365_1636846
422 Ga0439436_0014683
423 Ga0451807_0011282
424 Ga0439449_0023193
425 Ga0439449_0028990
426 Ga0439449_0110651
427 Ga0439457_000541
428 Ga0439462_0033373
429 Ga0450898_002074
430 Ga0450899_000913
431 Ga0466969_0008560
432 Ga0466972_0000007
433 Ga0466965_0246351
434 Ga0466966_0048561
435 Ga0466964_0057117
436 Ga0466959_0061319
437 Ga0495638_0077084
438 Ga0495630_0161305
439 Ga0495668_0000918
440 Ga0495668_0001235
441 Ga0495625_0036180
442 Ga0495686_0001452
443 Ga0501300_016515
444 Ga0501032_0003268
445 Ga0501034_0025738
446 Ga0501036_0172612
447 Ga0501038_0034682
448 Ga0501043_0016763
449 Ga0501046_0028303
450 Ga0501047_0026372
451 Ga0501048_0011660
452 Ga0501067_0018811
453 Ga0501070_0005025
454 Ga0501072_0272560
455 Ga0501073_0010657
456 Ga0501074_0003012
457 Ga0501202_029124
458 Ga0501206_016767
459 Ga0501217_000290
460 Ga0501223_009646
461 Ga0501240_025119
462 Ga0501257_036959
463 Ga0501219_000436
464 Ga0501221_000267
465 Ga0501225_0019839
466 Ga0501234_002273
467 Ga0501079_0073598
468 Ga0501080_0083384
469 Ga0501035_0012694
470 Ga0501035_0577945
471 Ga0501044_0008346
472 Ga0501044_0020959
473 Ga0501284_00172
474 nmdc:mga0k408_10507_c1
475 nmdc:mga0k408_136964_c1
476 nmdc:mga0k408_286833_c1
477 nmdc:mga0k408_30928_c1
478 nmdc:mga0k408_679_c1
479 nmdc:mga05p37_6736_c1
480 nmdc:mga08y16_157112_c1
481 nmdc:mga08y16_225056_c1
482 nmdc:mga08y16_450068_c1
483 nmdc:mga08y16_742673_c1
484 Ga0500646_0011658
485 Ga0500583_0002361
486 Ga0500641_0079366
487 Ga0500642_0041532
488 Ga0500568_0001958
489 Ga0500616_0000853
490 Ga0500616_0004958
491 Ga0500622_0049980
492 Ga0500611_000070
493 Ga0501084_0109103
494 Ga0501082_0190202
495 2738724298
496 2896114121
497 2896320236
498 2896345241

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00657

Lipase_GDSL

GDSL-like Lipase/Acylhydrolase

50

252

0.83

PF13472

Lipase_GDSL_2

GDSL-like Lipase/Acylhydrolase family

52

247

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o14-assembly1.cif.gz_A x-ray crystal structure of protein yxim_bacsu from bacillus subtilis. northeast structural genomics consortium target sr595 0.8942 19 237
1pp4-assembly2.cif.gz_B the crystal structure of rhamnogalacturonan acetylesterase in space group p3121 0.8325 24 244
3c1u-assembly1.cif.gz_A d192n mutant of rhamnogalacturonan acetylesterase 0.8215 24 244
5tic-assembly1.cif.gz_A x-ray structure of wild-type e. coli acyl-coa thioesterase i at ph 5 0.7935 23 233
1pp4-assembly2.cif.gz_B the crystal structure of rhamnogalacturonan acetylesterase in space group p3121 0.7885 24 244
ID Description Score Start End Superfamily
2o14A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.913 22 237 3.40.50.1110
2o14A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.9 22 237 3.40.50.1110
3c1uA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.8212 24 244 3.40.50.1110
3c1uA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7843 24 244 3.40.50.1110
af_A0A0P0XIW7_1_112_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7735 110 177 3.40.50.1110
ID Description Score Start End GO Terms
AF-A0A839GFM8-F1-model_v4 Lysophospholipase L1-like esterase 0.9955 17 244 GO:0016787
AF-A0A5C1IES4-F1-model_v4 deleted 0.9917 17 243
AF-A0A359E4B6-F1-model_v4 GntR family transcriptional regulator 0.9914 30 244 GO:0016787
AF-A0A519ZW30-F1-model_v4 GntR family transcriptional regulator 0.991 124 240 GO:0016787
AF-A0A0P0CXH3-F1-model_v4 GntR family transcriptional regulator 0.9909 15 244 GO:0016787

Map