F360809

General Info

Members Datasets Scaffolds Average Seq Length
249 138 246 576

Family's Representative Sequence

Representative Sequence 3300025949|Ga0207667_10000414|Ga0207667_1000041415
Length 641
Sequence MKYLFAAAALFISLQCFPQLFPQAGYPRNYFRDPLAVPISLAANFGELREGHFHMGLDIRTQHRVNLPVYAAADGYIARVSVAPEGFGQAIYIDHPNGYTTVYGHLNRFFPALEAYVHREQYRRESWQVDLEIPPSLFPVKKGDLIARSGSTGGSQGPHLHFEIRRTADDINLNPLLFGLPVPDRTAPHIVRLAWYDRNKSIYEQSPHLVSVEIEGGRATGSAKAYTEMRTKPSLLTVGATHISFAISAFDTQTGSNNPNGIFEAALAEDGRPVIAFQMDHISYDNTRNINAHIDYKTKETGGPYLQQLFFLQGYPLPTIYSVPATDDAHHSAAAFPARGAHHTADPAALAAAGLHPSDGVLDIGDGRSHHIAIRVKDTGGNETLLSFDVQYSPAAGEPPTAGTKTGDTSPAFPAAAASAVTKKFYPGMLDGLEIRECAFYLGEHSLYDSATIGVAEARSPDPGLSLPGGVSDVYTIGVPWIPLLEPMLVRLRPMPPVADSPLRNDRPDTTGVIMVRSYGADREVRRPEWKDGWASARFGDFGNFQLVKDTTPPTIRFPGVKEGADLSKAPRIIVDVGDNLYATRHFRAELDGRWLCFTNDKHRAWIYTFDEHCPRGPHTLRISVEDVAGNQTVKELHFTH

Samples

Sample ID Description Type Environment
1 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
2 2914759650 Rhizosphaericola mali Isolate Rhizosphere
3 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
79 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
111 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
112 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
113 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
114 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
124 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
125 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
126 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
127 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
128 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
135 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
136 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
137 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
138 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.8
Metatranscriptomes 0
Isolates 1.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.21
Nodule 0
Rhizoplane 0
Rhizosphere 93.17
Stem 0
Stem Tuber 0
Unclassified 3.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000862 3300003203 Bacteria 14305
2 rootH2_10096425 3300003320 Bacteria 4817
3 rootH2_10119873 3300003320 Bacteria 4763
4 rootL2_10253602 3300003322 Bacteria 2568
5 JGI25160J50197_1000452 3300003354 Bacteria 25597
6 Ga0065714_10079938 3300005288 Bacteria 2477
7 Ga0070658_10000270 3300005327 Bacteria 45632
8 Ga0070676_10004006 3300005328 Bacteria 7731
9 Ga0070683_100005634 3300005329 Bacteria 10463
10 Ga0070683_100013202 3300005329 Bacteria 7195
11 Ga0070690_100030363 3300005330 Bacteria 3358
12 Ga0068869_100013858 3300005334 Bacteria 5375
13 Ga0070666_10000452 3300005335 Bacteria 24971
14 Ga0070666_10027076 3300005335 Bacteria 3751
15 Ga0070680_100065008 3300005336 Bacteria 2990
16 Ga0070680_100099482 3300005336 Bacteria 2413
17 Ga0068868_100001016 3300005338 Bacteria 19169
18 Ga0068868_100012823 3300005338 Bacteria 6132
19 Ga0070660_100005268 3300005339 Bacteria 8941
20 Ga0070660_100012662 3300005339 Bacteria 6029
21 Ga0070661_100003941 3300005344 Bacteria 10211
22 Ga0070668_100002032 3300005347 Bacteria 14795
23 Ga0070668_100025535 3300005347 Bacteria 4480
24 Ga0070669_100000934 3300005353 Bacteria 21298
25 Ga0070675_100002986 3300005354 Bacteria 12782
26 Ga0070675_100033560 3300005354 Bacteria 4162
27 Ga0070671_100004074 3300005355 Bacteria 11535
28 Ga0070673_100000322 3300005364 Bacteria 25217
29 Ga0070688_100000510 3300005365 Bacteria 19613
30 Ga0070659_100013202 3300005366 Bacteria 6143
31 Ga0070659_100049494 3300005366 Bacteria 3305
32 Ga0070667_100000827 3300005367 Bacteria 28762
33 Ga0070662_100003493 3300005457 Bacteria 9804
34 Ga0070662_100004097 3300005457 Bacteria 9154
35 Ga0070662_100009104 3300005457 Bacteria 6481
36 Ga0070681_10026168 3300005458 Bacteria 5866
37 Ga0070681_10031707 3300005458 Bacteria 5305
38 Ga0068867_100011965 3300005459 Bacteria 6129
39 Ga0070684_100019987 3300005535 Bacteria 5551
40 Ga0070684_100031330 3300005535 Bacteria 4526
41 Ga0068853_100000422 3300005539 Bacteria 28780
42 Ga0068853_100010199 3300005539 Bacteria 7594
43 Ga0068853_100020518 3300005539 Bacteria 5495
44 Ga0068853_100046971 3300005539 Bacteria 3705
45 Ga0070672_100000496 3300005543 Bacteria 22861
46 Ga0070672_100007724 3300005543 Bacteria 7325
47 Ga0070665_100000014 3300005548 Bacteria 484881
48 Ga0070665_100000916 3300005548 Bacteria 37835
49 Ga0068855_100002873 3300005563 Bacteria 21138
50 Ga0068855_100006360 3300005563 Bacteria 14396
51 Ga0068855_100008021 3300005563 Bacteria 12754
52 Ga0068855_100017900 3300005563 Bacteria 8514
53 Ga0068855_100062983 3300005563 Bacteria 4329
54 Ga0070664_100092148 3300005564 Unclassified 2623
55 Ga0068857_100000536 3300005577 Bacteria 27488
56 Ga0068857_100002416 3300005577 Bacteria 15233
57 Ga0068856_100014081 3300005614 Bacteria 7732
58 Ga0068856_100061843 3300005614 Bacteria 3699
59 Ga0068852_100011198 3300005616 Bacteria 6738
60 Ga0068852_100045041 3300005616 Bacteria 3750
61 Ga0068859_100019133 3300005617 Bacteria 6877
62 Ga0068864_100000239 3300005618 Bacteria 49175
63 Ga0068861_100002518 3300005719 Bacteria 11968
64 Ga0068861_100014736 3300005719 Bacteria 5491
65 Ga0068851_10000111 3300005834 Bacteria 43673
66 Ga0068863_100001093 3300005841 Bacteria 27062
67 Ga0068863_100203165 3300005841 Bacteria 1907
68 Ga0068858_100000453 3300005842 Bacteria 42983
69 Ga0068860_100000061 3300005843 Bacteria 192548
70 Ga0068860_100022093 3300005843 Bacteria 6159
71 Ga0068860_100030317 3300005843 Bacteria 5203
72 Ga0068860_100138950 3300005843 Bacteria 2334
73 Ga0068862_100002841 3300005844 Bacteria 15192
74 Ga0081539_10000377 3300005985 Bacteria 97368
75 Ga0075366_10003073 3300006195 Bacteria 8714
76 Ga0097621_100004264 3300006237 Bacteria 9933
77 Ga0097621_100010308 3300006237 Bacteria 6830
78 Ga0068871_100000319 3300006358 Bacteria 33457
79 Ga0068871_100118819 3300006358 Bacteria 2231
80 Ga0075428_100090060 3300006844 Unclassified 3346
81 Ga0075429_100101221 3300006880 Unclassified 2515
82 Ga0097620_100019133 3300006931 Bacteria 6877
83 Ga0105240_10000198 3300009093 Bacteria 122388
84 Ga0105240_10013967 3300009093 Bacteria 10993
85 Ga0105240_10015957 3300009093 Bacteria 10186
86 Ga0105240_10016504 3300009093 Bacteria 9995
87 Ga0105240_10063722 3300009093 Bacteria 4583
88 Ga0105240_10077023 3300009093 Bacteria 4110
89 Ga0111539_10000962 3300009094 Bacteria 37802
90 Ga0105247_10010598 3300009101 Bacteria 5568
91 Ga0114129_10220600 3300009147 Unclassified 2558
92 Ga0105241_10009669 3300009174 Bacteria 7087
93 Ga0105237_10000409 3300009545 Bacteria 61096
94 Ga0105237_10005617 3300009545 Bacteria 14137
95 Ga0105237_10009021 3300009545 Bacteria 10719
96 Ga0105237_10015967 3300009545 Bacteria 7807
97 Ga0105237_10021537 3300009545 Bacteria 6627
98 Ga0105238_10017486 3300009551 Bacteria 7289
99 Ga0105249_10041433 3300009553 Unclassified 4187
100 Ga0105239_10000019 3300010375 Bacteria 273836
101 Ga0105239_10011609 3300010375 Bacteria 9828
102 Ga0105239_10015448 3300010375 Bacteria 8457
103 Ga0105239_10041345 3300010375 Bacteria 5053
104 Ga0105239_10071297 3300010375 Bacteria 3818
105 Ga0157373_10002874 3300013100 Bacteria 13027
106 Ga0157373_10021650 3300013100 Bacteria 4665
107 Ga0157371_10002114 3300013102 Bacteria 19341
108 Ga0157371_10002846 3300013102 Bacteria 16168
109 Ga0157371_10067072 3300013102 Bacteria 2540
110 Ga0157371_10074646 3300013102 Bacteria 2401
111 Ga0157370_10002201 3300013104 Bacteria 23794
112 Ga0157370_10047041 3300013104 Bacteria 4136
113 Ga0157369_10104801 3300013105 Bacteria 3011
114 Ga0157369_10114983 3300013105 Bacteria 2857
115 Ga0157374_10000011 3300013296 Bacteria 466749
116 Ga0157374_10000168 3300013296 Bacteria 60649
117 Ga0157378_10003243 3300013297 Bacteria 14474
118 Ga0157378_10063343 3300013297 Bacteria 3304
119 Ga0163162_10000171 3300013306 Bacteria 59945
120 Ga0163162_10000614 3300013306 Bacteria 33070
121 Ga0163162_10000913 3300013306 Bacteria 27444
122 Ga0163162_10001319 3300013306 Bacteria 23168
123 Ga0163162_10023043 3300013306 Bacteria 6142
124 Ga0163162_10144246 3300013306 Bacteria 2496
125 Ga0157372_10001903 3300013307 Bacteria 22652
126 Ga0157372_10003342 3300013307 Bacteria 17320
127 Ga0157372_10003937 3300013307 Bacteria 15948
128 Ga0157372_10016256 3300013307 Bacteria 7986
129 Ga0157372_10022298 3300013307 Bacteria 6850
130 Ga0157372_10065202 3300013307 Bacteria 4089
131 Ga0157372_10208789 3300013307 Bacteria 2263
132 Ga0157375_10000098 3300013308 Bacteria 88130
133 Ga0157375_10000601 3300013308 Bacteria 31961
134 Ga0157375_10012310 3300013308 Bacteria 7586
135 Ga0163163_10000271 3300014325 Bacteria 52036
136 Ga0157380_10014204 3300014326 Bacteria 5823
137 Ga0157377_10004274 3300014745 Bacteria 6550
138 Ga0157379_10000688 3300014968 Bacteria 27461
139 Ga0157376_10000444 3300014969 Bacteria 26696
140 Ga0157376_10000522 3300014969 Bacteria 24818
141 Ga0157376_10003806 3300014969 Bacteria 10437
142 Ga0157376_10022966 3300014969 Bacteria 4872
143 Ga0157376_10069086 3300014969 Bacteria 2994
144 Ga0163161_10006625 3300017792 Bacteria 8020
145 Ga0163161_10014070 3300017792 Bacteria 5570
146 Ga0163161_10017711 3300017792 Bacteria 4991
147 Ga0207426_1000026 3300025302 Bacteria 515228
148 Ga0207656_10000186 3300025321 Bacteria 22363
149 Ga0207680_10008931 3300025903 Bacteria 4943
150 Ga0207647_10012136 3300025904 Bacteria 6012
151 Ga0207647_10016314 3300025904 Bacteria 5072
152 Ga0207645_10002849 3300025907 Bacteria 13412
153 Ga0207654_10000603 3300025911 Bacteria 20269
154 Ga0207707_10039720 3300025912 Bacteria 4113
155 Ga0207695_10000212 3300025913 Bacteria 156450
156 Ga0207695_10000346 3300025913 Bacteria 107028
157 Ga0207695_10012325 3300025913 Bacteria 10271
158 Ga0207695_10012913 3300025913 Bacteria 9996
159 Ga0207695_10024645 3300025913 Bacteria 6758
160 Ga0207695_10074727 3300025913 Bacteria 3450
161 Ga0207671_10000402 3300025914 Bacteria 60371
162 Ga0207671_10004209 3300025914 Bacteria 13867
163 Ga0207671_10007992 3300025914 Bacteria 9058
164 Ga0207671_10010299 3300025914 Bacteria 7727
165 Ga0207671_10038237 3300025914 Bacteria 3556
166 Ga0207657_10040703 3300025919 Bacteria 4115
167 Ga0207649_10003473 3300025920 Bacteria 8611
168 Ga0207649_10008939 3300025920 Bacteria 5472
169 Ga0207681_10003766 3300025923 Bacteria 9420
170 Ga0207706_10004604 3300025933 Bacteria 12944
171 Ga0207706_10015748 3300025933 Bacteria 6835
172 Ga0207706_10050692 3300025933 Bacteria 3668
173 Ga0207691_10001636 3300025940 Bacteria 22246
174 Ga0207661_10020210 3300025944 Bacteria 4972
175 Ga0207661_10106782 3300025944 Bacteria 2360
176 Ga0207679_10028024 3300025945 Bacteria 3904
177 Ga0207679_10044269 3300025945 Bacteria 3211
178 Ga0207667_10000414 3300025949 Bacteria 57815
179 Ga0207667_10002151 3300025949 Bacteria 24703
180 Ga0207667_10017202 3300025949 Bacteria 8148
181 Ga0207667_10018745 3300025949 Bacteria 7750
182 Ga0207712_10022763 3300025961 Unclassified 4130
183 Ga0207668_10000389 3300025972 Bacteria 27898
184 Ga0207668_10022839 3300025972 Bacteria 4010
185 Ga0207658_10001797 3300025986 Bacteria 16076
186 Ga0207677_10000963 3300026023 Bacteria 15947
187 Ga0207677_10011773 3300026023 Bacteria 5001
188 Ga0207703_10001052 3300026035 Bacteria 26317
189 Ga0207639_10026711 3300026041 Bacteria 4196
190 Ga0207639_10048758 3300026041 Bacteria 3207
191 Ga0207639_10056363 3300026041 Unclassified 3012
192 Ga0207702_10044287 3300026078 Bacteria 3740
193 Ga0207648_10005571 3300026089 Bacteria 12669
194 Ga0207648_10018589 3300026089 Bacteria 6290
195 Ga0207648_10136081 3300026089 Bacteria 2164
196 Ga0207676_10002362 3300026095 Bacteria 13491
197 Ga0207674_10001615 3300026116 Bacteria 29028
198 Ga0207674_10003228 3300026116 Bacteria 20079
199 Ga0207674_10009705 3300026116 Bacteria 10971
200 Ga0207675_100000260 3300026118 Bacteria 50253
201 Ga0207675_100003966 3300026118 Bacteria 14367
202 Ga0207675_100032030 3300026118 Bacteria 4897
203 Ga0207698_10041425 3300026142 Bacteria 3431
204 Ga0207698_10061907 3300026142 Bacteria 2919
205 Ga0268266_10000068 3300028379 Bacteria 241100
206 Ga0268266_10002778 3300028379 Bacteria 18278
207 Ga0268265_10086648 3300028380 Unclassified 2489
208 Ga0268264_10000079 3300028381 Bacteria 249516
209 Ga0268264_10004438 3300028381 Bacteria 11968
210 Ga0268264_10023065 3300028381 Bacteria 5078
211 Ga0268264_10023995 3300028381 Bacteria 4977
212 Ga0307517_10002947 3300028786 Bacteria 26911
213 Ga0307515_10011966 3300028794 Bacteria 16385
214 Ga0307511_10010626 3300030521 Bacteria 9137
215 Ga0307516_10003590 3300031730 Bacteria 19774
216 Ga0307510_10009449 3300033180 Bacteria 11612
217 Ga0373937_0160322 3300036401 Bacteria 2109
218 Ga0395905_0000023 3300037471 Bacteria 319640
219 Ga0466972_0000310 3300044658 Bacteria 28249
220 Ga0466972_0000997 3300044658 Bacteria 13620
221 Ga0466970_0000820 3300044765 Bacteria 14937
222 Ga0466958_0065709 3300045836 Bacteria 2214
223 Ga0495606_0009699 3300046507 Bacteria 8103
224 Ga0495643_0012971 3300046522 Bacteria 5007
225 Ga0495648_0003925 3300046524 Bacteria 12873
226 Ga0495633_0000067 3300046558 Bacteria 139122
227 Ga0495611_0000435 3300046648 Bacteria 25748
228 Ga0495611_0019835 3300046648 Unclassified 2890
229 Ga0495647_0011434 3300046681 Bacteria 3042
230 Ga0495658_0028600 3300046683 Bacteria 3010
231 Ga0495672_0018887 3300047320 Bacteria 4564
232 Ga0495672_0031850 3300047320 Bacteria 3287
233 Ga0495687_000058 3300047443 Bacteria 185830
234 Ga0495686_0000005 3300047472 Bacteria 827143
235 Ga0501034_0000007 3300049571 Bacteria 357805
236 Ga0501034_0024166 3300049571 Bacteria 6182
237 Ga0501034_0139843 3300049571 Bacteria 2401
238 Ga0501044_0174529 3300049823 Bacteria 2119
239 nmdc:mga09592_35234_c1 3300050508 Bacteria 4189
240 nmdc:mga08y16_109953_c1 3300050511 Unclassified 2870
241 Ga0500562_000013 3300053108 Bacteria 150003
242 Ga0500568_0003967 3300053139 Bacteria 8047
243 Ga0500622_0001742 3300053156 Bacteria 16819
244 Ga0500622_0002303 3300053156 Bacteria 13984
245 Ga0500661_000921 3300055283 Bacteria 5522
246 Ga0466962_0004388 3300061719 Bacteria 6765

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050508 nmdc:mga09592_35234_c1 nmdc:mga09592_35234_c1_30_1514 457
2 3300036401 Ga0373937_0160322 Ga0373937_0160322_26_1423 463
3 3300013307 Ga0157372_10003342 Ga0157372_1000334214 507
4 3300003354 JGI25160J50197_1000452 JGI25160J50197_100045215 513
5 3300025302 Ga0207426_1000026 Ga0207426_1000026367 513
6 3300005329 Ga0070683_100013202 Ga0070683_1000132026 514
7 3300045836 Ga0466958_0065709 Ga0466958_0065709_57_1781 521
8 3300061719 Ga0466962_0004388 Ga0466962_0004388_4481_6205 521
9 3300005355 Ga0070671_100004074 Ga0070671_1000040744 523
10 3300005841 Ga0068863_100203165 Ga0068863_1002031652 523
11 3300006358 Ga0068871_100000319 Ga0068871_10000031914 523
12 3300013297 Ga0157378_10003243 Ga0157378_100032439 523
13 3300013306 Ga0163162_10001319 Ga0163162_1000131910 523
14 3300013308 Ga0157375_10000601 Ga0157375_1000060117 523
15 3300014969 Ga0157376_10000444 Ga0157376_1000044410 523
16 3300017792 Ga0163161_10017711 Ga0163161_100177115 523
17 3300026089 Ga0207648_10136081 Ga0207648_101360812 523
18 3300005329 Ga0070683_100005634 Ga0070683_1000056343 525
19 3300005366 Ga0070659_100049494 Ga0070659_1000494943 525
20 3300005535 Ga0070684_100031330 Ga0070684_1000313305 525
21 3300005539 Ga0068853_100010199 Ga0068853_1000101993 525
22 3300005577 Ga0068857_100002416 Ga0068857_10000241615 525
23 3300013296 Ga0157374_10000011 Ga0157374_10000011162 525
24 3300014969 Ga0157376_10003806 Ga0157376_100038063 525
25 3300025920 Ga0207649_10003473 Ga0207649_100034733 525
26 3300025944 Ga0207661_10020210 Ga0207661_100202103 525
27 3300025945 Ga0207679_10028024 Ga0207679_100280243 525
28 3300026041 Ga0207639_10048758 Ga0207639_100487582 525
29 3300026116 Ga0207674_10003228 Ga0207674_1000322812 525
30 iso_pu_bacteria 2881955468 2881955539 531
31 3300014969 Ga0157376_10022966 Ga0157376_100229664 539
32 3300026116 Ga0207674_10009705 Ga0207674_100097054 543
33 3300005347 Ga0070668_100025535 Ga0070668_1000255352 544
34 3300005353 Ga0070669_100000934 Ga0070669_10000093414 544
35 3300005354 Ga0070675_100002986 Ga0070675_1000029869 544
36 3300005365 Ga0070688_100000510 Ga0070688_1000005109 544
37 3300005457 Ga0070662_100004097 Ga0070662_1000040973 544
38 3300005543 Ga0070672_100007724 Ga0070672_1000077243 544
39 3300005617 Ga0068859_100019133 Ga0068859_1000191334 544
40 3300005719 Ga0068861_100014736 Ga0068861_1000147363 544
41 3300005844 Ga0068862_100002841 Ga0068862_1000028413 544
42 3300006931 Ga0097620_100019133 Ga0097620_1000191333 544
43 3300009094 Ga0111539_10000962 Ga0111539_1000096213 544
44 3300013308 Ga0157375_10012310 Ga0157375_100123103 544
45 3300014326 Ga0157380_10014204 Ga0157380_100142045 544
46 3300014745 Ga0157377_10004274 Ga0157377_100042743 544
47 3300025923 Ga0207681_10003766 Ga0207681_100037668 544
48 3300025933 Ga0207706_10050692 Ga0207706_100506923 544
49 3300025972 Ga0207668_10022839 Ga0207668_100228393 544
50 3300026118 Ga0207675_100000260 Ga0207675_10000026023 544
51 3300028380 Ga0268265_10086648 Ga0268265_100866482 544
52 3300050511 nmdc:mga08y16_109953_c1 nmdc:mga08y16_109953_c1_851_2662 544
53 3300046507 Ga0495606_0009699 Ga0495606_0009699_709_2820 546
54 3300046522 Ga0495643_0012971 Ga0495643_0012971_2298_4106 546
55 3300005335 Ga0070666_10027076 Ga0070666_100270761 547
56 3300005843 Ga0068860_100000061 Ga0068860_100000061164 547
57 3300013306 Ga0163162_10023043 Ga0163162_100230432 547
58 3300025903 Ga0207680_10008931 Ga0207680_100089314 547
59 3300028381 Ga0268264_10000079 Ga0268264_1000007920 547
60 3300046524 Ga0495648_0003925 Ga0495648_0003925_1505_3259 547
61 3300046648 Ga0495611_0019835 Ga0495611_0019835_1030_2784 547
62 3300047443 Ga0495687_000058 Ga0495687_000058_7790_9544 547
63 3300053139 Ga0500568_0003967 Ga0500568_0003967_4693_6468 547
64 3300053156 Ga0500622_0002303 Ga0500622_0002303_8584_10338 547
65 3300046681 Ga0495647_0011434 Ga0495647_0011434_688_2346 548
66 3300046683 Ga0495658_0028600 Ga0495658_0028600_976_2634 548
67 3300005563 Ga0068855_100062983 Ga0068855_1000629833 549
68 3300005843 Ga0068860_100138950 Ga0068860_1001389502 549
69 3300009093 Ga0105240_10013967 Ga0105240_1001396710 549
70 3300009545 Ga0105237_10009021 Ga0105237_100090217 549
71 3300010375 Ga0105239_10011609 Ga0105239_100116095 549
72 3300010375 Ga0105239_10015448 Ga0105239_100154485 549
73 3300013306 Ga0163162_10144246 Ga0163162_101442462 549
74 3300025913 Ga0207695_10074727 Ga0207695_100747272 549
75 3300025914 Ga0207671_10004209 Ga0207671_1000420911 549
76 3300025914 Ga0207671_10007992 Ga0207671_100079927 549
77 3300028381 Ga0268264_10004438 Ga0268264_1000443811 549
78 3300005563 Ga0068855_100008021 Ga0068855_1000080213 550
79 3300009545 Ga0105237_10015967 Ga0105237_100159673 550
80 3300010375 Ga0105239_10000019 Ga0105239_10000019214 550
81 3300025914 Ga0207671_10010299 Ga0207671_100102993 550
82 3300025949 Ga0207667_10018745 Ga0207667_100187457 550
83 3300047472 Ga0495686_0000005 Ga0495686_0000005_362695_364518 550
84 3300005548 Ga0070665_100000014 Ga0070665_100000014370 551
85 3300006237 Ga0097621_100004264 Ga0097621_1000042642 551
86 3300013102 Ga0157371_10002114 Ga0157371_1000211414 551
87 3300028379 Ga0268266_10000068 Ga0268266_1000006865 551
88 3300005288 Ga0065714_10079938 Ga0065714_100799381 552
89 3300006195 Ga0075366_10003073 Ga0075366_100030734 552
90 3300009093 Ga0105240_10000198 Ga0105240_1000019843 552
91 3300009174 Ga0105241_10009669 Ga0105241_100096692 552
92 3300009545 Ga0105237_10005617 Ga0105237_100056173 552
93 3300009551 Ga0105238_10017486 Ga0105238_100174865 552
94 3300013307 Ga0157372_10065202 Ga0157372_100652023 552
95 3300025911 Ga0207654_10000603 Ga0207654_100006033 552
96 3300025913 Ga0207695_10000346 Ga0207695_1000034641 552
97 3300028794 Ga0307515_10011966 Ga0307515_100119664 552
98 3300037471 Ga0395905_0000023 Ga0395905_0000023_211992_213719 552
99 3300046558 Ga0495633_0000067 Ga0495633_0000067_26173_27894 552
100 3300046648 Ga0495611_0000435 Ga0495611_0000435_21989_23932 552
101 3300049823 Ga0501044_0174529 Ga0501044_0174529_54_1742 552
102 3300005539 Ga0068853_100046971 Ga0068853_1000469713 553
103 3300005563 Ga0068855_100006360 Ga0068855_1000063603 553
104 3300005577 Ga0068857_100000536 Ga0068857_10000053621 553
105 3300005616 Ga0068852_100011198 Ga0068852_1000111985 553
106 3300009093 Ga0105240_10063722 Ga0105240_100637224 553
107 3300009093 Ga0105240_10077023 Ga0105240_100770233 553
108 3300013104 Ga0157370_10002201 Ga0157370_100022013 553
109 3300013105 Ga0157369_10114983 Ga0157369_101149831 553
110 3300013307 Ga0157372_10001903 Ga0157372_1000190320 553
111 3300025904 Ga0207647_10012136 Ga0207647_100121365 553
112 3300025913 Ga0207695_10024645 Ga0207695_100246456 553
113 3300025949 Ga0207667_10002151 Ga0207667_1000215123 553
114 3300026116 Ga0207674_10001615 Ga0207674_100016157 553
115 3300026142 Ga0207698_10041425 Ga0207698_100414253 553
116 3300003320 rootH2_10096425 rootH2_100964253 554
117 3300003320 rootH2_10119873 rootH2_101198733 554
118 3300009093 Ga0105240_10015957 Ga0105240_100159575 554
119 3300025913 Ga0207695_10012325 Ga0207695_100123254 554
120 3300033180 Ga0307510_10009449 Ga0307510_100094498 555
121 3300003322 rootL2_10253602 rootL2_102536021 556
122 3300005843 Ga0068860_100030317 Ga0068860_1000303173 556
123 3300013102 Ga0157371_10067072 Ga0157371_100670722 556
124 3300013307 Ga0157372_10003937 Ga0157372_1000393710 556
125 3300028381 Ga0268264_10023995 Ga0268264_100239954 556
126 3300028786 Ga0307517_10002947 Ga0307517_1000294718 556
127 3300005719 Ga0068861_100002518 Ga0068861_1000025184 557
128 3300026118 Ga0207675_100003966 Ga0207675_1000039664 557
129 3300044658 Ga0466972_0000997 Ga0466972_0000997_463_2367 557
130 3300005458 Ga0070681_10026168 Ga0070681_100261681 558
131 3300006844 Ga0075428_100090060 Ga0075428_1000900602 558
132 3300006880 Ga0075429_100101221 Ga0075429_1001012212 558
133 3300009147 Ga0114129_10220600 Ga0114129_102206002 558
134 3300025912 Ga0207707_10039720 Ga0207707_100397204 558
135 3300049571 Ga0501034_0000007 Ga0501034_0000007_164984_166711 558
136 3300025904 Ga0207647_10016314 Ga0207647_100163144 559
137 3300031730 Ga0307516_10003590 Ga0307516_100035909 559
138 3300044658 Ga0466972_0000310 Ga0466972_0000310_22925_24727 559
139 3300044765 Ga0466970_0000820 Ga0466970_0000820_8561_10363 559
140 3300047320 Ga0495672_0018887 Ga0495672_0018887_1967_3694 559
141 3300013306 Ga0163162_10000614 Ga0163162_1000061425 560
142 3300013306 Ga0163162_10000913 Ga0163162_1000091322 560
143 3300017792 Ga0163161_10014070 Ga0163161_100140704 560
144 3300047320 Ga0495672_0031850 Ga0495672_0031850_910_2763 560
145 3300053108 Ga0500562_000013 Ga0500562_000013_104184_105932 560
146 3300053156 Ga0500622_0001742 Ga0500622_0001742_7383_9137 560
147 3300055283 Ga0500661_000921 Ga0500661_000921_2679_4424 560
148 iso_pu_bacteria 2929154850 2929159643 560
149 3300009545 Ga0105237_10000409 Ga0105237_1000040941 561
150 3300025914 Ga0207671_10000402 Ga0207671_1000040231 561
151 3300030521 Ga0307511_10010626 Ga0307511_100106266 561
152 3300005539 Ga0068853_100000422 Ga0068853_1000004223 562
153 3300010375 Ga0105239_10041345 Ga0105239_100413453 562
154 3300013307 Ga0157372_10022298 Ga0157372_100222983 562
155 3300025913 Ga0207695_10000212 Ga0207695_1000021288 562
156 3300025949 Ga0207667_10000414 Ga0207667_1000041415 562
157 3300026041 Ga0207639_10056363 Ga0207639_100563632 562
158 iso_pu_bacteria 2914759650 2914760629 562
159 3300005327 Ga0070658_10000270 Ga0070658_1000027031 563
160 3300005328 Ga0070676_10004006 Ga0070676_100040065 563
161 3300005334 Ga0068869_100013858 Ga0068869_1000138584 563
162 3300005335 Ga0070666_10000452 Ga0070666_100004524 563
163 3300005338 Ga0068868_100001016 Ga0068868_1000010164 563
164 3300005347 Ga0070668_100002032 Ga0070668_1000020324 563
165 3300005364 Ga0070673_100000322 Ga0070673_10000032210 563
166 3300005367 Ga0070667_100000827 Ga0070667_10000082712 563
167 3300005457 Ga0070662_100003493 Ga0070662_1000034933 563
168 3300005459 Ga0068867_100011965 Ga0068867_1000119653 563
169 3300005543 Ga0070672_100000496 Ga0070672_1000004968 563
170 3300005548 Ga0070665_100000916 Ga0070665_10000091631 563
171 3300005563 Ga0068855_100002873 Ga0068855_1000028738 563
172 3300005618 Ga0068864_100000239 Ga0068864_10000023912 563
173 3300005834 Ga0068851_10000111 Ga0068851_1000011139 563
174 3300005841 Ga0068863_100001093 Ga0068863_10000109313 563
175 3300005842 Ga0068858_100000453 Ga0068858_10000045327 563
176 3300005843 Ga0068860_100022093 Ga0068860_1000220934 563
177 3300009093 Ga0105240_10016504 Ga0105240_100165045 563
178 3300009101 Ga0105247_10010598 Ga0105247_100105984 563
179 3300009553 Ga0105249_10041433 Ga0105249_100414334 563
180 3300013296 Ga0157374_10000168 Ga0157374_1000016813 563
181 3300013306 Ga0163162_10000171 Ga0163162_1000017136 563
182 3300013308 Ga0157375_10000098 Ga0157375_1000009824 563
183 3300014325 Ga0163163_10000271 Ga0163163_1000027117 563
184 3300014968 Ga0157379_10000688 Ga0157379_100006888 563
185 3300014969 Ga0157376_10000522 Ga0157376_100005228 563
186 3300014969 Ga0157376_10069086 Ga0157376_100690862 563
187 3300017792 Ga0163161_10006625 Ga0163161_100066253 563
188 3300025321 Ga0207656_10000186 Ga0207656_1000018611 563
189 3300025907 Ga0207645_10002849 Ga0207645_1000284910 563
190 3300025913 Ga0207695_10012913 Ga0207695_100129135 563
191 3300025933 Ga0207706_10015748 Ga0207706_100157484 563
192 3300025940 Ga0207691_10001636 Ga0207691_100016367 563
193 3300025961 Ga0207712_10022763 Ga0207712_100227631 563
194 3300025972 Ga0207668_10000389 Ga0207668_1000038915 563
195 3300025986 Ga0207658_10001797 Ga0207658_1000179711 563
196 3300026023 Ga0207677_10000963 Ga0207677_1000096313 563
197 3300026035 Ga0207703_10001052 Ga0207703_1000105213 563
198 3300026089 Ga0207648_10018589 Ga0207648_100185894 563
199 3300026095 Ga0207676_10002362 Ga0207676_100023624 563
200 3300026118 Ga0207675_100032030 Ga0207675_1000320304 563
201 3300028379 Ga0268266_10002778 Ga0268266_100027783 563
202 3300028381 Ga0268264_10023065 Ga0268264_100230654 563
203 3300005336 Ga0070680_100065008 Ga0070680_1000650081 564
204 3300005339 Ga0070660_100012662 Ga0070660_1000126626 564
205 3300005458 Ga0070681_10031707 Ga0070681_100317073 564
206 3300013100 Ga0157373_10021650 Ga0157373_100216503 564
207 3300013102 Ga0157371_10002846 Ga0157371_1000284610 564
208 3300013102 Ga0157371_10074646 Ga0157371_100746461 564
209 3300013307 Ga0157372_10208789 Ga0157372_102087892 564
210 3300025919 Ga0207657_10040703 Ga0207657_100407034 564
211 3300025949 Ga0207667_10017202 Ga0207667_100172023 564
212 3300049571 Ga0501034_0024166 Ga0501034_0024166_2124_3869 564
213 3300049571 Ga0501034_0139843 Ga0501034_0139843_262_2007 564
214 3300005614 Ga0068856_100061843 Ga0068856_1000618435 565
215 3300026089 Ga0207648_10005571 Ga0207648_100055712 567
216 3300005330 Ga0070690_100030363 Ga0070690_1000303632 570
217 3300005336 Ga0070680_100099482 Ga0070680_1000994821 570
218 3300005338 Ga0068868_100012823 Ga0068868_1000128235 570
219 3300005339 Ga0070660_100005268 Ga0070660_1000052686 570
220 3300005344 Ga0070661_100003941 Ga0070661_1000039418 570
221 3300005354 Ga0070675_100033560 Ga0070675_1000335605 570
222 3300005366 Ga0070659_100013202 Ga0070659_1000132023 570
223 3300005457 Ga0070662_100009104 Ga0070662_1000091042 570
224 3300005535 Ga0070684_100019987 Ga0070684_1000199876 570
225 3300005539 Ga0068853_100020518 Ga0068853_1000205183 570
226 3300005563 Ga0068855_100017900 Ga0068855_1000179006 570
227 3300005564 Ga0070664_100092148 Ga0070664_1000921482 570
228 3300005614 Ga0068856_100014081 Ga0068856_1000140818 570
229 3300005616 Ga0068852_100045041 Ga0068852_1000450412 570
230 3300006237 Ga0097621_100010308 Ga0097621_1000103085 570
231 3300006358 Ga0068871_100118819 Ga0068871_1001188192 570
232 3300009545 Ga0105237_10021537 Ga0105237_100215374 570
233 3300010375 Ga0105239_10071297 Ga0105239_100712971 570
234 3300013100 Ga0157373_10002874 Ga0157373_100028744 570
235 3300013104 Ga0157370_10047041 Ga0157370_100470415 570
236 3300013105 Ga0157369_10104801 Ga0157369_101048012 570
237 3300013297 Ga0157378_10063343 Ga0157378_100633432 570
238 3300025914 Ga0207671_10038237 Ga0207671_100382372 570
239 3300025920 Ga0207649_10008939 Ga0207649_100089392 570
240 3300025933 Ga0207706_10004604 Ga0207706_100046046 570
241 3300025944 Ga0207661_10106782 Ga0207661_101067821 570
242 3300025945 Ga0207679_10044269 Ga0207679_100442691 570
243 3300026023 Ga0207677_10011773 Ga0207677_100117732 570
244 3300026041 Ga0207639_10026711 Ga0207639_100267112 570
245 3300026078 Ga0207702_10044287 Ga0207702_100442871 570
246 3300026142 Ga0207698_10061907 Ga0207698_100619072 570
247 3300003203 JGI25406J46586_10000862 JGI25406J46586_1000086215 571
248 3300005985 Ga0081539_10000377 Ga0081539_1000037773 571
249 3300013307 Ga0157372_10016256 Ga0157372_100162564 571

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01551

Peptidase_M23

Peptidase family M23

138

173

0.93

PF01551

Peptidase_M23

Peptidase family M23

52

122

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
8c0j-assembly1.cif.gz_B structure of amib enzymatic domain bound to the envc lytm domain 0.8718 30 181
4bh5-assembly4.cif.gz_D lytm domain of envc, an activator of cell wall amidases in escherichia coli 0.8494 30 184
4zyb-assembly3.cif.gz_C high resolution structure of m23 peptidase lytm with substrate analogue 0.8268 42 178
4bh5-assembly4.cif.gz_D lytm domain of envc, an activator of cell wall amidases in escherichia coli 0.8191 30 184
8c0j-assembly1.cif.gz_B structure of amib enzymatic domain bound to the envc lytm domain 0.8161 30 181
ID Description Score Start End Superfamily
af_P0AFS9_286_413_2.70.70.10 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8574 35 178 2.70.70.10
4bh5D00 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8494 30 184 2.70.70.10
3sluA03 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8348 33 178 2.70.70.10
4zybC00 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8268 42 178 2.70.70.10
4bh5D00 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8191 30 184 2.70.70.10
ID Description Score Start End GO Terms
AF-A0A2E4L1X0-F1-model_v4 Peptidase M23 0.9815 47 168 GO:0004222
AF-A0A3C1T834-F1-model_v4 M23 family peptidase 0.9787 26 328 GO:0004222
AF-A0A3B8QH33-F1-model_v4 Peptidase M23 domain-containing protein 0.9784 36 184 GO:0004222
AF-A0A7W1VZS3-F1-model_v4 M23 family metallopeptidase 0.9775 24 270 GO:0004222
AF-A0A511YD21-F1-model_v4 Peptidase M23 0.9732 42 571 GO:0004222

Feature Viewer

pLDDT pTM Quality
91.09 0.87 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map