F360254

General Info

Members Datasets Scaffolds Average Seq Length
248 181 247 376

Family's Representative Sequence

Representative Sequence 3300049586|Ga0501070_0016598|Ga0501070_0016598_1572_2891
Length 429
Sequence MPKKSSNRKLQPASPSVLALDDDPWRGLPGPVADLIEGEIEPITIEILDSIAREVPEYARPLEGRFGRGIRRGVEEALAQFVSLIRDPEAGRDSGREVYLALGRGEQRAGRTLDSLQAAYRLGARVAWRRFADACRRAGVGAEPLALLAEAVFAYIDELAADSVEGYAQAQAEVLVDLLLGDPPADAADLTAAARAAGWEVPAGLAALACPEEALARVARRLPPEALVTVVDGEGCVLLPDPDGPGRPEALARAAAEAAIVLGPTVAPSAAAESWQLAMALLGAVTAGAEPLAGVRGAGDGADRDRRPGTRPAAEREGTGLLRVDDNLAILLLFESRELAGRLAARRLAPLADLTPKARARMRETALAHLRHDGNAVAMAAEMHVHPQTARYRIARLRELLGDQLDDPDARFELQLALRAPGAFAEIIG

Samples

Sample ID Description Type Environment
1 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
82 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
83 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
94 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
95 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
96 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
97 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
98 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
99 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
100 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
101 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
104 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
107 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
108 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
109 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
113 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
114 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
115 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
116 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
117 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
123 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
134 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
135 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
136 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
137 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
138 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
164 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
165 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
169 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
175 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
176 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
177 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
178 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
179 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.21
Nodule 0
Rhizoplane 4.03
Rhizosphere 91.13
Stem 0
Stem Tuber 0
Unclassified 3.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10124264 3300005328 Bacteria 1624
2 Ga0070683_100031877 3300005329 Bacteria 4796
3 Ga0070666_10012119 3300005335 Bacteria 5430
4 Ga0070682_100000077 3300005337 Bacteria 89055
5 Ga0070689_100104107 3300005340 Bacteria 2250
6 Ga0070692_10053358 3300005345 Bacteria 2108
7 Ga0070674_100000063 3300005356 Bacteria 47714
8 Ga0070673_100002647 3300005364 Bacteria 10955
9 Ga0070688_100000022 3300005365 Bacteria 71190
10 Ga0070659_100064501 3300005366 Bacteria 2899
11 Ga0070667_100017503 3300005367 Bacteria 5940
12 Ga0070667_100023299 3300005367 Bacteria 5135
13 Ga0070713_100000022 3300005436 Bacteria 102527
14 Ga0070711_100024930 3300005439 Bacteria 3909
15 Ga0070700_100013412 3300005441 Bacteria 4602
16 Ga0070663_100000732 3300005455 Bacteria 17693
17 Ga0070662_100004453 3300005457 Bacteria 8861
18 Ga0070681_10181659 3300005458 Bacteria 2025
19 Ga0070681_10215538 3300005458 Bacteria 1836
20 Ga0068867_100000814 3300005459 Bacteria 21051
21 Ga0070685_10000047 3300005466 Bacteria 72690
22 Ga0070679_100000069 3300005530 Bacteria 76557
23 Ga0070679_100002033 3300005530 Bacteria 18161
24 Ga0068853_100003809 3300005539 Bacteria 11559
25 Ga0070672_100000175 3300005543 Bacteria 35613
26 Ga0070695_100085684 3300005545 Bacteria 2092
27 Ga0070665_100083765 3300005548 Bacteria 3194
28 Ga0070665_100087877 3300005548 Bacteria 3114
29 Ga0068854_100000531 3300005578 Bacteria 23124
30 Ga0068852_100293796 3300005616 Bacteria 1571
31 Ga0068866_10000011 3300005718 Bacteria 97191
32 Ga0068861_100027818 3300005719 Bacteria 4122
33 Ga0068851_10014328 3300005834 Unclassified 3764
34 Ga0068858_100077817 3300005842 Bacteria 3081
35 Ga0068860_100005001 3300005843 Bacteria 13503
36 Ga0068860_100217492 3300005843 Bacteria 1855
37 Ga0068862_100002681 3300005844 Bacteria 15654
38 Ga0081455_10008076 3300005937 Bacteria 10989
39 Ga0081455_10051133 3300005937 Bacteria 3546
40 Ga0081538_10000206 3300005981 Bacteria 65455
41 Ga0081538_10001086 3300005981 Bacteria 28963
42 Ga0081538_10005687 3300005981 Bacteria 11152
43 Ga0081538_10057038 3300005981 Bacteria 2281
44 Ga0081540_1001193 3300005983 Bacteria 22751
45 Ga0081539_10001387 3300005985 Bacteria 41711
46 Ga0075365_10057858 3300006038 Bacteria 2579
47 Ga0070715_10000011 3300006163 Bacteria 183857
48 Ga0075430_100007904 3300006846 Bacteria 8994
49 Ga0075430_100023632 3300006846 Bacteria 5234
50 Ga0075430_100111776 3300006846 Bacteria 2278
51 Ga0075434_100298267 3300006871 Bacteria 1632
52 Ga0111539_10008565 3300009094 Bacteria 12986
53 Ga0111539_10020690 3300009094 Bacteria 8102
54 Ga0105245_10005416 3300009098 Bacteria 11215
55 Ga0114129_10017741 3300009147 Bacteria 10135
56 Ga0114129_10294328 3300009147 Bacteria 2165
57 Ga0105238_10000172 3300009551 Bacteria 70799
58 Ga0105249_10003553 3300009553 Bacteria 13485
59 Ga0105239_10059496 3300010375 Bacteria 4193
60 Ga0157374_10335205 3300013296 Bacteria 1501
61 Ga0157375_10002263 3300013308 Bacteria 16667
62 Ga0157379_10223419 3300014968 Bacteria 1706
63 Ga0163161_10000018 3300017792 Bacteria 228801
64 Ga0207656_10000740 3300025321 Bacteria 10662
65 Ga0207642_10000010 3300025899 Bacteria 99207
66 Ga0207680_10006224 3300025903 Bacteria 5758
67 Ga0207685_10000001 3300025905 Bacteria 604473
68 Ga0207645_10054492 3300025907 Bacteria 2554
69 Ga0207707_10067539 3300025912 Bacteria 3114
70 Ga0207652_10000142 3300025921 Bacteria 76696
71 Ga0207652_10000587 3300025921 Bacteria 36581
72 Ga0207694_10000004 3300025924 Bacteria 967075
73 Ga0207687_10064142 3300025927 Bacteria 2604
74 Ga0207700_10000008 3300025928 Bacteria 341717
75 Ga0207690_10017802 3300025932 Bacteria 4348
76 Ga0207706_10002066 3300025933 Bacteria 19680
77 Ga0207669_10000025 3300025937 Bacteria 93633
78 Ga0207691_10000609 3300025940 Bacteria 35618
79 Ga0207661_10053086 3300025944 Bacteria 3242
80 Ga0207651_10010018 3300025960 Bacteria 5226
81 Ga0207712_10026018 3300025961 Bacteria 3894
82 Ga0207640_10000128 3300025981 Bacteria 57474
83 Ga0207658_10035283 3300025986 Bacteria 3580
84 Ga0207703_10043062 3300026035 Bacteria 3622
85 Ga0207639_10002159 3300026041 Bacteria 13247
86 Ga0207678_10000786 3300026067 Bacteria 29023
87 Ga0207678_10177357 3300026067 Bacteria 1819
88 Ga0207708_10002725 3300026075 Bacteria 12974
89 Ga0207641_10000129 3300026088 Bacteria 110871
90 Ga0207641_10025749 3300026088 Bacteria 4851
91 Ga0207648_10000271 3300026089 Bacteria 56175
92 Ga0207675_100010202 3300026118 Bacteria 8805
93 Ga0207683_10213207 3300026121 Unclassified 1758
94 Ga0268266_10000756 3300028379 Bacteria 43282
95 Ga0268266_10113633 3300028379 Bacteria 2401
96 Ga0268266_10125802 3300028379 Bacteria 2287
97 Ga0268265_10005437 3300028380 Bacteria 8707
98 Ga0265319_1000052 3300028563 Bacteria 95426
99 Ga0265338_10031549 3300028800 Bacteria 5193
100 Ga0265327_10005556 3300031251 Bacteria 10470
101 Ga0307409_100053740 3300031995 Bacteria 3097
102 Ga0307416_100032254 3300032002 Bacteria 3955
103 Ga0307415_100029047 3300032126 Bacteria 3528
104 Ga0373937_0027350 3300036401 Bacteria 5157
105 Ga0395898_0030561 3300037466 Bacteria 5390
106 Ga0466957_0075412 3300044842 Bacteria 2093
107 Ga0495592_0000428 3300046454 Bacteria 31801
108 Ga0495603_0003276 3300046455 Bacteria 9641
109 Ga0495651_0148143 3300046462 Bacteria 1695
110 Ga0495653_0022292 3300046463 Bacteria 5126
111 Ga0495582_0000013 3300046473 Bacteria 110372
112 Ga0495662_0000021 3300046476 Bacteria 54969
113 Ga0495594_0000007 3300046499 Bacteria 160047
114 Ga0495608_0000854 3300046511 Bacteria 21319
115 Ga0495608_0012717 3300046511 Bacteria 5840
116 Ga0495618_0000058 3300046514 Bacteria 79638
117 Ga0495620_0004503 3300046515 Bacteria 7843
118 Ga0495628_0000061 3300046516 Bacteria 86531
119 Ga0495628_0009068 3300046516 Bacteria 8508
120 Ga0495630_0001243 3300046517 Bacteria 17599
121 Ga0495630_0005396 3300046517 Bacteria 9021
122 Ga0495652_0000003 3300046529 Bacteria 597094
123 Ga0495652_0012182 3300046529 Bacteria 7768
124 Ga0495586_0000862 3300046535 Bacteria 17412
125 Ga0495587_0012963 3300046536 Bacteria 5241
126 Ga0495587_0015621 3300046536 Bacteria 4737
127 Ga0495645_0105167 3300046543 Bacteria 2003
128 Ga0495622_0000270 3300046557 Bacteria 39432
129 Ga0495667_0019916 3300046559 Bacteria 4527
130 Ga0495656_0003084 3300046615 Bacteria 5599
131 Ga0495668_0044198 3300046616 Bacteria 2476
132 Ga0495634_0000063 3300046642 Bacteria 86878
133 Ga0495634_0016801 3300046642 Bacteria 5228
134 Ga0495634_0067092 3300046642 Bacteria 2374
135 Ga0495634_0192186 3300046642 Bacteria 1272
136 Ga0495625_0000029 3300046660 Bacteria 244646
137 Ga0495635_0000026 3300046663 Bacteria 142517
138 Ga0495635_0060074 3300046663 Bacteria 2613
139 Ga0495657_0009280 3300046675 Bacteria 7466
140 Ga0495647_0000027 3300046681 Bacteria 58315
141 Ga0495647_0006284 3300046681 Bacteria 3926
142 Ga0495658_0000009 3300046683 Bacteria 110421
143 Ga0495613_0000068 3300046689 Bacteria 101803
144 Ga0495613_0000157 3300046689 Bacteria 66401
145 Ga0495624_0003879 3300046690 Bacteria 11028
146 Ga0495600_0038404 3300046809 Bacteria 3115
147 Ga0495604_0000289 3300047317 Bacteria 44881
148 Ga0495604_0000346 3300047317 Bacteria 41587
149 Ga0495604_0033912 3300047317 Bacteria 4039
150 Ga0495604_0083282 3300047317 Bacteria 2391
151 Ga0495674_0000020 3300047319 Bacteria 178465
152 Ga0495680_0000952 3300047322 Bacteria 32176
153 Ga0495675_0101117 3300047444 Bacteria 1804
154 Ga0495673_0058064 3300047469 Bacteria 1669
155 Ga0495686_0051474 3300047472 Bacteria 2584
156 Ga0495593_0028970 3300047673 Bacteria 3040
157 Ga0495602_0000009 3300048088 Bacteria 258991
158 Ga0495602_0000547 3300048088 Bacteria 35115
159 Ga0495602_0086742 3300048088 Bacteria 2612
160 Ga0496104_0060670 3300048907 Bacteria 3583
161 Ga0496104_0068585 3300048907 Bacteria 3370
162 Ga0496106_0000049 3300048909 Bacteria 97550
163 Ga0496107_0012980 3300048910 Bacteria 5821
164 Ga0496108_0005308 3300048911 Bacteria 10401
165 Ga0496109_0000021 3300048912 Bacteria 189945
166 Ga0496110_0000121 3300048913 Bacteria 43576
167 Ga0496111_0000210 3300048914 Bacteria 27543
168 Ga0496113_0034101 3300048916 Bacteria 3711
169 Ga0496113_0126214 3300048916 Bacteria 2004
170 Ga0496116_0002620 3300048919 Bacteria 18682
171 Ga0496118_0014539 3300048921 Bacteria 7361
172 Ga0496119_0005458 3300048922 Bacteria 12173
173 Ga0496119_0029199 3300048922 Bacteria 3745
174 Ga0496120_0008935 3300048923 Bacteria 7175
175 Ga0496121_0056260 3300048924 Bacteria 3268
176 Ga0496121_0155788 3300048924 Bacteria 1676
177 Ga0496126_0006496 3300048929 Bacteria 13013
178 Ga0496126_0022547 3300048929 Bacteria 6123
179 Ga0501031_0001377 3300049568 Bacteria 15025
180 Ga0501032_0023067 3300049569 Bacteria 4307
181 Ga0501033_0008266 3300049570 Bacteria 8059
182 Ga0501033_0043247 3300049570 Bacteria 3355
183 Ga0501034_0069315 3300049571 Bacteria 3537
184 Ga0501034_0139292 3300049571 Bacteria 2406
185 Ga0501036_0000063 3300049572 Bacteria 69495
186 Ga0501036_0029477 3300049572 Bacteria 4634
187 Ga0501037_0001167 3300049573 Bacteria 19383
188 Ga0501037_0031025 3300049573 Bacteria 3946
189 Ga0501038_0011892 3300049574 Bacteria 7943
190 Ga0501039_0016230 3300049575 Bacteria 5706
191 Ga0501040_0182368 3300049576 Bacteria 1488
192 Ga0501042_0014367 3300049578 Bacteria 5404
193 Ga0501043_0027901 3300049579 Bacteria 4431
194 Ga0501046_0010234 3300049580 Bacteria 8070
195 Ga0501047_0000499 3300049581 Bacteria 42560
196 Ga0501047_0041337 3300049581 Bacteria 4455
197 Ga0501047_0154340 3300049581 Bacteria 2170
198 Ga0501048_0008072 3300049582 Bacteria 7968
199 Ga0501048_0097015 3300049582 Bacteria 2079
200 Ga0501067_0070436 3300049583 Bacteria 1936
201 Ga0501068_0048770 3300049584 Bacteria 2557
202 Ga0501069_0005179 3300049585 Bacteria 6775
203 Ga0501069_0060690 3300049585 Bacteria 2111
204 Ga0501070_0013307 3300049586 Bacteria 6938
205 Ga0501070_0016598 3300049586 Bacteria 6185
206 Ga0501070_0042853 3300049586 Bacteria 3768
207 Ga0501070_0069653 3300049586 Bacteria 2912
208 Ga0501071_0040496 3300049587 Bacteria 3334
209 Ga0501072_0100348 3300049588 Bacteria 2301
210 Ga0501073_0007741 3300049589 Bacteria 7975
211 Ga0501073_0056414 3300049589 Bacteria 2747
212 Ga0501074_0015169 3300049590 Bacteria 5603
213 Ga0501074_0036032 3300049590 Bacteria 3584
214 Ga0501074_0060822 3300049590 Bacteria 2721
215 Ga0501074_0146371 3300049590 Bacteria 1689
216 Ga0501079_0069484 3300049741 Bacteria 2719
217 Ga0501080_0039311 3300049742 Bacteria 4415
218 Ga0501080_0067232 3300049742 Bacteria 3333
219 Ga0501080_0172354 3300049742 Bacteria 1995
220 Ga0501083_0021022 3300049744 Bacteria 4536
221 Ga0501083_0028971 3300049744 Bacteria 3813
222 Ga0501083_0030521 3300049744 Bacteria 3703
223 Ga0501035_0001327 3300049822 Bacteria 25524
224 Ga0501044_0016330 3300049823 Bacteria 7970
225 Ga0501045_0068390 3300049824 Bacteria 2609
226 nmdc:mga00v17_33509_c1 3300050491 Bacteria 3043
227 nmdc:mga05p37_26569_c1 3300050507 Bacteria 7040
228 nmdc:mga0qj67_6463_c1 3300050509 Bacteria 8613
229 nmdc:mga06r32_104414_c1 3300050510 Bacteria 2782
230 nmdc:mga08y16_31333_c1 3300050511 Bacteria 5593
231 nmdc:mga08y16_50612_c1 3300050511 Bacteria 4347
232 nmdc:mga08y16_577693_c1 3300050511 Bacteria 1135
233 nmdc:mga0a205_226868_c1 3300050515 Unclassified 1752
234 Ga0495601_0000031 3300053077 Bacteria 105493
235 Ga0495601_0002152 3300053077 Bacteria 11084
236 Ga0495601_0052067 3300053077 Bacteria 2584
237 Ga0495612_0006120 3300053078 Bacteria 4953
238 Ga0495595_0003017 3300053084 Bacteria 6657
239 Ga0495595_0011717 3300053084 Bacteria 3671
240 Ga0495595_0031967 3300053084 Bacteria 2368
241 Ga0495619_0000327 3300053085 Bacteria 33238
242 Ga0495619_0001365 3300053085 Bacteria 16047
243 Ga0495619_0002539 3300053085 Bacteria 11949
244 Ga0495619_0036612 3300053085 Bacteria 3195
245 Ga0500556_0000383 3300053104 Bacteria 32358
246 Ga0501084_0096691 3300054114 Bacteria 2480
247 Ga0501082_0048519 3300060353 Bacteria 3659

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049581 Ga0501047_0154340 Ga0501047_0154340_25_1104 300
2 3300060353 Ga0501082_0048519 Ga0501082_0048519_136_1383 322
3 3300049568 Ga0501031_0001377 Ga0501031_0001377_13567_14817 323
4 3300049569 Ga0501032_0023067 Ga0501032_0023067_438_1688 323
5 3300049570 Ga0501033_0008266 Ga0501033_0008266_6418_7668 323
6 3300049571 Ga0501034_0139292 Ga0501034_0139292_295_1545 323
7 3300049572 Ga0501036_0000063 Ga0501036_0000063_68134_69384 323
8 3300049573 Ga0501037_0001167 Ga0501037_0001167_6401_7651 323
9 3300049574 Ga0501038_0011892 Ga0501038_0011892_265_1515 323
10 3300049579 Ga0501043_0027901 Ga0501043_0027901_269_1519 323
11 3300049580 Ga0501046_0010234 Ga0501046_0010234_409_1659 323
12 3300049581 Ga0501047_0000499 Ga0501047_0000499_34877_36127 323
13 3300049582 Ga0501048_0008072 Ga0501048_0008072_457_1707 323
14 3300049585 Ga0501069_0005179 Ga0501069_0005179_5445_6695 323
15 3300049586 Ga0501070_0013307 Ga0501070_0013307_5408_6658 323
16 3300049588 Ga0501072_0100348 Ga0501072_0100348_842_2092 323
17 3300049589 Ga0501073_0007741 Ga0501073_0007741_308_1558 323
18 3300049590 Ga0501074_0015169 Ga0501074_0015169_4222_5472 323
19 3300049744 Ga0501083_0030521 Ga0501083_0030521_2227_3477 323
20 3300049822 Ga0501035_0001327 Ga0501035_0001327_17851_19101 323
21 3300049823 Ga0501044_0016330 Ga0501044_0016330_309_1559 323
22 3300049824 Ga0501045_0068390 Ga0501045_0068390_1231_2481 323
23 3300054114 Ga0501084_0096691 Ga0501084_0096691_1053_2303 323
24 3300049576 Ga0501040_0182368 Ga0501040_0182368_160_1413 324
25 3300050511 nmdc:mga08y16_577693_c1 nmdc:mga08y16_577693_c1_62_1099 331
26 3300028563 Ga0265319_1000052 Ga0265319_100005211 336
27 3300047673 Ga0495593_0028970 Ga0495593_0028970_1983_3011 336
28 3300053078 Ga0495612_0006120 Ga0495612_0006120_36_1217 338
29 3300028800 Ga0265338_10031549 Ga0265338_100315492 342
30 3300005337 Ga0070682_100000077 Ga0070682_10000007772 344
31 3300005937 Ga0081455_10051133 Ga0081455_100511333 344
32 3300017792 Ga0163161_10000018 Ga0163161_1000001871 344
33 3300025944 Ga0207661_10053086 Ga0207661_100530862 346
34 3300036401 Ga0373937_0027350 Ga0373937_0027350_3143_4357 346
35 3300053084 Ga0495595_0031967 Ga0495595_0031967_147_1361 346
36 3300047317 Ga0495604_0083282 Ga0495604_0083282_386_1594 347
37 3300049584 Ga0501068_0048770 Ga0501068_0048770_1306_2469 350
38 3300005367 Ga0070667_100017503 Ga0070667_1000175034 351
39 3300005842 Ga0068858_100077817 Ga0068858_1000778171 351
40 3300005844 Ga0068862_100002681 Ga0068862_10000268111 351
41 3300009553 Ga0105249_10003553 Ga0105249_100035535 351
42 3300025986 Ga0207658_10035283 Ga0207658_100352833 351
43 3300026035 Ga0207703_10043062 Ga0207703_100430622 351
44 3300028380 Ga0268265_10005437 Ga0268265_100054372 351
45 3300046454 Ga0495592_0000428 Ga0495592_0000428_21050_22210 351
46 3300046543 Ga0495645_0105167 Ga0495645_0105167_630_1859 351
47 3300005843 Ga0068860_100217492 Ga0068860_1002174922 352
48 3300046455 Ga0495603_0003276 Ga0495603_0003276_1766_2953 352
49 3300048916 Ga0496113_0126214 Ga0496113_0126214_284_1510 352
50 3300005981 Ga0081538_10000206 Ga0081538_1000020631 353
51 3300046473 Ga0495582_0000013 Ga0495582_0000013_53949_55160 353
52 3300046683 Ga0495658_0000009 Ga0495658_0000009_55222_56433 353
53 3300048929 Ga0496126_0022547 Ga0496126_0022547_4549_5781 355
54 3300053077 Ga0495601_0002152 Ga0495601_0002152_4272_5441 356
55 3300025907 Ga0207645_10054492 Ga0207645_100544922 357
56 3300047317 Ga0495604_0000346 Ga0495604_0000346_15196_16320 357
57 3300046511 Ga0495608_0000854 Ga0495608_0000854_2653_3825 358
58 3300046642 Ga0495634_0016801 Ga0495634_0016801_1062_2285 358
59 3300048088 Ga0495602_0086742 Ga0495602_0086742_428_1594 358
60 3300053084 Ga0495595_0003017 Ga0495595_0003017_4257_5429 358
61 3300044842 Ga0466957_0075412 Ga0466957_0075412_639_1847 359
62 3300046529 Ga0495652_0000003 Ga0495652_0000003_207650_208831 359
63 3300048921 Ga0496118_0014539 Ga0496118_0014539_1664_2863 359
64 3300049586 Ga0501070_0042853 Ga0501070_0042853_1807_2970 359
65 3300049590 Ga0501074_0060822 Ga0501074_0060822_279_1442 359
66 3300049742 Ga0501080_0172354 Ga0501080_0172354_778_1941 359
67 3300005345 Ga0070692_10053358 Ga0070692_100533582 360
68 3300005834 Ga0068851_10014328 Ga0068851_100143284 360
69 3300025321 Ga0207656_10000740 Ga0207656_100007402 360
70 3300032126 Ga0307415_100029047 Ga0307415_1000290475 360
71 3300005329 Ga0070683_100031877 Ga0070683_1000318772 361
72 3300005455 Ga0070663_100000732 Ga0070663_1000007324 361
73 3300005458 Ga0070681_10215538 Ga0070681_102155382 361
74 3300005530 Ga0070679_100002033 Ga0070679_1000020338 361
75 3300005578 Ga0068854_100000531 Ga0068854_1000005319 361
76 3300005937 Ga0081455_10008076 Ga0081455_100080765 361
77 3300009094 Ga0111539_10020690 Ga0111539_1002069010 361
78 3300009147 Ga0114129_10294328 Ga0114129_102943281 361
79 3300025921 Ga0207652_10000587 Ga0207652_1000058718 361
80 3300025981 Ga0207640_10000128 Ga0207640_100001289 361
81 3300026067 Ga0207678_10000786 Ga0207678_1000078611 361
82 3300048923 Ga0496120_0008935 Ga0496120_0008935_4298_5515 361
83 3300048924 Ga0496121_0155788 Ga0496121_0155788_122_1339 361
84 3300050511 nmdc:mga08y16_50612_c1 nmdc:mga08y16_50612_c1_1420_2730 361
85 3300053085 Ga0495619_0001365 Ga0495619_0001365_14588_15775 361
86 3300005335 Ga0070666_10012119 Ga0070666_100121194 362
87 3300005340 Ga0070689_100104107 Ga0070689_1001041072 362
88 3300005436 Ga0070713_100000022 Ga0070713_10000002284 362
89 3300025903 Ga0207680_10006224 Ga0207680_100062243 362
90 3300025928 Ga0207700_10000008 Ga0207700_1000000867 362
91 3300046462 Ga0495651_0148143 Ga0495651_0148143_206_1369 362
92 3300048907 Ga0496104_0060670 Ga0496104_0060670_2143_3375 362
93 3300048922 Ga0496119_0005458 Ga0496119_0005458_1505_2737 362
94 3300048924 Ga0496121_0056260 Ga0496121_0056260_455_1687 362
95 3300026067 Ga0207678_10177357 Ga0207678_101773572 363
96 3300046689 Ga0495613_0000068 Ga0495613_0000068_27754_28935 363
97 3300047317 Ga0495604_0000289 Ga0495604_0000289_30886_32067 363
98 3300048088 Ga0495602_0000009 Ga0495602_0000009_70989_72170 363
99 3300048907 Ga0496104_0068585 Ga0496104_0068585_761_1942 363
100 3300048919 Ga0496116_0002620 Ga0496116_0002620_11538_12785 363
101 3300048922 Ga0496119_0029199 Ga0496119_0029199_896_2143 363
102 3300049590 Ga0501074_0146371 Ga0501074_0146371_218_1405 363
103 3300053077 Ga0495601_0000031 Ga0495601_0000031_92752_93933 363
104 3300046536 Ga0495587_0015621 Ga0495587_0015621_2387_3577 364
105 3300048913 Ga0496110_0000121 Ga0496110_0000121_26562_27770 364
106 3300048914 Ga0496111_0000210 Ga0496111_0000210_22499_23707 364
107 3300050491 nmdc:mga00v17_33509_c1 nmdc:mga00v17_33509_c1_930_2219 365
108 3300005366 Ga0070659_100064501 Ga0070659_1000645012 366
109 3300005458 Ga0070681_10181659 Ga0070681_101816592 366
110 3300005530 Ga0070679_100000069 Ga0070679_10000006931 366
111 3300025912 Ga0207707_10067539 Ga0207707_100675392 366
112 3300025921 Ga0207652_10000142 Ga0207652_1000014251 366
113 3300025932 Ga0207690_10017802 Ga0207690_100178023 366
114 3300025960 Ga0207651_10010018 Ga0207651_100100182 367
115 3300005364 Ga0070673_100002647 Ga0070673_10000264710 368
116 3300005981 Ga0081538_10001086 Ga0081538_100010863 368
117 3300006163 Ga0070715_10000011 Ga0070715_1000001199 368
118 3300025905 Ga0207685_10000001 Ga0207685_1000000188 368
119 3300028379 Ga0268266_10113633 Ga0268266_101136332 368
120 3300046516 Ga0495628_0000061 Ga0495628_0000061_136_1338 368
121 3300048088 Ga0495602_0000547 Ga0495602_0000547_30057_31259 368
122 3300048929 Ga0496126_0006496 Ga0496126_0006496_6515_7741 368
123 3300031251 Ga0265327_10005556 Ga0265327_100055568 369
124 3300046463 Ga0495653_0022292 Ga0495653_0022292_46_1215 369
125 3300046675 Ga0495657_0009280 Ga0495657_0009280_3582_4751 369
126 3300046681 Ga0495647_0000027 Ga0495647_0000027_46689_47855 369
127 3300006038 Ga0075365_10057858 Ga0075365_100578583 370
128 3300046514 Ga0495618_0000058 Ga0495618_0000058_78399_79571 370
129 3300046809 Ga0495600_0038404 Ga0495600_0038404_1882_3054 370
130 3300047317 Ga0495604_0033912 Ga0495604_0033912_634_1815 370
131 3300053084 Ga0495595_0011717 Ga0495595_0011717_2230_3411 370
132 3300037466 Ga0395898_0030561 Ga0395898_0030561_1414_2601 371
133 3300046616 Ga0495668_0044198 Ga0495668_0044198_375_1550 371
134 3300005367 Ga0070667_100023299 Ga0070667_1000232995 372
135 3300005543 Ga0070672_100000175 Ga0070672_1000001753 372
136 3300005548 Ga0070665_100087877 Ga0070665_1000878772 372
137 3300009551 Ga0105238_10000172 Ga0105238_100001722 372
138 3300025924 Ga0207694_10000004 Ga0207694_10000004886 372
139 3300025940 Ga0207691_10000609 Ga0207691_1000060934 372
140 3300028379 Ga0268266_10000756 Ga0268266_1000075623 372
141 3300046690 Ga0495624_0003879 Ga0495624_0003879_1859_3031 372
142 3300049581 Ga0501047_0041337 Ga0501047_0041337_2119_3417 372
143 3300046476 Ga0495662_0000021 Ga0495662_0000021_53639_54853 373
144 3300046681 Ga0495647_0006284 Ga0495647_0006284_584_1783 373
145 3300047322 Ga0495680_0000952 Ga0495680_0000952_20244_21440 373
146 iso_pu_bacteria 2818991472 2819744128 373
147 3300046689 Ga0495613_0000157 Ga0495613_0000157_17293_18471 374
148 3300006846 Ga0075430_100007904 Ga0075430_1000079045 375
149 3300009147 Ga0114129_10017741 Ga0114129_100177415 375
150 3300013308 Ga0157375_10002263 Ga0157375_1000226316 375
151 3300046517 Ga0495630_0005396 Ga0495630_0005396_7691_8863 375
152 3300046557 Ga0495622_0000270 Ga0495622_0000270_88_1263 375
153 3300050507 nmdc:mga05p37_26569_c1 nmdc:mga05p37_26569_c1_2459_3640 375
154 3300050509 nmdc:mga0qj67_6463_c1 nmdc:mga0qj67_6463_c1_1877_3058 375
155 3300046516 Ga0495628_0009068 Ga0495628_0009068_4065_5246 376
156 3300046529 Ga0495652_0012182 Ga0495652_0012182_3110_4360 376
157 3300046642 Ga0495634_0000063 Ga0495634_0000063_74125_75330 376
158 3300046663 Ga0495635_0000026 Ga0495635_0000026_140850_142022 376
159 3300048909 Ga0496106_0000049 Ga0496106_0000049_93245_94414 377
160 3300048910 Ga0496107_0012980 Ga0496107_0012980_3589_4758 377
161 3300048916 Ga0496113_0034101 Ga0496113_0034101_2031_3218 377
162 3300013296 Ga0157374_10335205 Ga0157374_103352052 378
163 3300046499 Ga0495594_0000007 Ga0495594_0000007_78077_79264 378
164 3300005843 Ga0068860_100005001 Ga0068860_1000050016 379
165 3300047472 Ga0495686_0051474 Ga0495686_0051474_1333_2514 379
166 3300046515 Ga0495620_0004503 Ga0495620_0004503_762_1943 380
167 3300047319 Ga0495674_0000020 Ga0495674_0000020_1597_2772 380
168 3300050510 nmdc:mga06r32_104414_c1 nmdc:mga06r32_104414_c1_1066_2286 380
169 3300053085 Ga0495619_0002539 Ga0495619_0002539_1547_2722 380
170 3300046517 Ga0495630_0001243 Ga0495630_0001243_9939_11144 381
171 3300049570 Ga0501033_0043247 Ga0501033_0043247_1967_3151 381
172 3300049571 Ga0501034_0069315 Ga0501034_0069315_1631_2815 381
173 3300049572 Ga0501036_0029477 Ga0501036_0029477_2128_3312 381
174 3300049573 Ga0501037_0031025 Ga0501037_0031025_741_1925 381
175 3300049575 Ga0501039_0016230 Ga0501039_0016230_162_1346 381
176 3300049578 Ga0501042_0014367 Ga0501042_0014367_1404_2588 381
177 3300049582 Ga0501048_0097015 Ga0501048_0097015_880_2064 381
178 3300049583 Ga0501067_0070436 Ga0501067_0070436_376_1560 381
179 3300049585 Ga0501069_0060690 Ga0501069_0060690_323_1507 381
180 3300049586 Ga0501070_0069653 Ga0501070_0069653_1032_2216 381
181 3300049587 Ga0501071_0040496 Ga0501071_0040496_48_1265 381
182 3300049589 Ga0501073_0056414 Ga0501073_0056414_532_1716 381
183 3300049590 Ga0501074_0036032 Ga0501074_0036032_869_2092 381
184 3300049741 Ga0501079_0069484 Ga0501079_0069484_1506_2690 381
185 3300049742 Ga0501080_0039311 Ga0501080_0039311_2827_4011 381
186 3300049742 Ga0501080_0067232 Ga0501080_0067232_1566_2783 381
187 3300049744 Ga0501083_0028971 Ga0501083_0028971_66_1250 381
188 3300053077 Ga0495601_0052067 Ga0495601_0052067_209_1414 381
189 3300046642 Ga0495634_0067092 Ga0495634_0067092_226_1434 382
190 3300047469 Ga0495673_0058064 Ga0495673_0058064_100_1308 382
191 3300049744 Ga0501083_0021022 Ga0501083_0021022_1527_2747 382
192 3300006846 Ga0075430_100023632 Ga0075430_1000236325 384
193 3300026121 Ga0207683_10213207 Ga0207683_102132072 384
194 3300046642 Ga0495634_0192186 Ga0495634_0192186_60_1232 384
195 3300049586 Ga0501070_0016598 Ga0501070_0016598_1572_2891 384
196 3300005356 Ga0070674_100000063 Ga0070674_10000006320 385
197 3300005365 Ga0070688_100000022 Ga0070688_10000002225 385
198 3300005466 Ga0070685_10000047 Ga0070685_1000004749 385
199 3300005718 Ga0068866_10000011 Ga0068866_1000001121 385
200 3300014968 Ga0157379_10223419 Ga0157379_102234192 385
201 3300025899 Ga0207642_10000010 Ga0207642_1000001074 385
202 3300025937 Ga0207669_10000025 Ga0207669_1000002510 385
203 3300026088 Ga0207641_10025749 Ga0207641_100257491 385
204 3300046536 Ga0495587_0012963 Ga0495587_0012963_3601_4776 385
205 3300047444 Ga0495675_0101117 Ga0495675_0101117_562_1737 385
206 3300006871 Ga0075434_100298267 Ga0075434_1002982672 386
207 3300009094 Ga0111539_10008565 Ga0111539_1000856513 386
208 3300046511 Ga0495608_0012717 Ga0495608_0012717_3424_4602 386
209 3300046535 Ga0495586_0000862 Ga0495586_0000862_15947_17125 386
210 3300050511 nmdc:mga08y16_31333_c1 nmdc:mga08y16_31333_c1_2567_3796 386
211 3300050515 nmdc:mga0a205_226868_c1 nmdc:mga0a205_226868_c1_166_1395 386
212 3300026088 Ga0207641_10000129 Ga0207641_100001298 387
213 3300046559 Ga0495667_0019916 Ga0495667_0019916_2350_3531 387
214 3300053104 Ga0500556_0000383 Ga0500556_0000383_8296_9504 387
215 3300005459 Ga0068867_100000814 Ga0068867_10000081419 388
216 3300005981 Ga0081538_10005687 Ga0081538_100056877 388
217 3300005981 Ga0081538_10057038 Ga0081538_100570382 388
218 3300005985 Ga0081539_10001387 Ga0081539_1000138729 388
219 3300026089 Ga0207648_10000271 Ga0207648_100002715 388
220 3300046660 Ga0495625_0000029 Ga0495625_0000029_202884_204080 388
221 3300046663 Ga0495635_0060074 Ga0495635_0060074_111_1316 388
222 3300053085 Ga0495619_0000327 Ga0495619_0000327_6835_8040 388
223 3300053085 Ga0495619_0036612 Ga0495619_0036612_695_1900 388
224 3300005439 Ga0070711_100024930 Ga0070711_1000249304 389
225 3300005548 Ga0070665_100083765 Ga0070665_1000837654 389
226 3300005983 Ga0081540_1001193 Ga0081540_10011936 389
227 3300028379 Ga0268266_10125802 Ga0268266_101258022 389
228 3300046615 Ga0495656_0003084 Ga0495656_0003084_4322_5542 389
229 3300048911 Ga0496108_0005308 Ga0496108_0005308_8033_9241 389
230 3300048912 Ga0496109_0000021 Ga0496109_0000021_93939_95147 389
231 3300006846 Ga0075430_100111776 Ga0075430_1001117763 393
232 3300005539 Ga0068853_100003809 Ga0068853_1000038095 394
233 3300026041 Ga0207639_10002159 Ga0207639_100021595 394
234 3300005328 Ga0070676_10124264 Ga0070676_101242641 402
235 3300005441 Ga0070700_100013412 Ga0070700_1000134122 402
236 3300005457 Ga0070662_100004453 Ga0070662_1000044537 402
237 3300005545 Ga0070695_100085684 Ga0070695_1000856841 402
238 3300005616 Ga0068852_100293796 Ga0068852_1002937962 402
239 3300005719 Ga0068861_100027818 Ga0068861_1000278182 402
240 3300009098 Ga0105245_10005416 Ga0105245_100054164 402
241 3300010375 Ga0105239_10059496 Ga0105239_100594963 402
242 3300025927 Ga0207687_10064142 Ga0207687_100641423 402
243 3300025933 Ga0207706_10002066 Ga0207706_1000206617 402
244 3300025961 Ga0207712_10026018 Ga0207712_100260183 402
245 3300026075 Ga0207708_10002725 Ga0207708_100027252 402
246 3300026118 Ga0207675_100010202 Ga0207675_10001020211 402
247 3300031995 Ga0307409_100053740 Ga0307409_1000537403 402
248 3300032002 Ga0307416_100032254 Ga0307416_1000322542 402

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13556

HTH_30

PucR C-terminal helix-turn-helix domain

362

420

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3pmd-assembly1.cif.gz_A-2 crystal structure of the sporulation inhibitor pxo1-118 from bacillus anthracis 0.7702 27 167
5ohf-assembly2.cif.gz_C globin sensor domain of afgchk (feiii form) in complex with cyanide, partially reduced 0.748 14 162
8h17-assembly1.cif.gz_A crystal structure of the globin domain of thermosynechococcus elongatus bp-1 0.723 20 164
1or6-assembly1.cif.gz_B crystal structure of hemat sensor domain from b.subtilis in the unliganded form 0.717 3 158
3zta-assembly1.cif.gz_A-2 the bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling 0.7139 36 174
ID Description Score Start End Superfamily
af_P77171_5_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8456 337 378 1.10.10.10
3pmdA00 Mainly Alpha;Orthogonal Bundle;Globin-like;Histidine kinase N-terminal domain 0.7702 27 167 1.10.490.70
3pmcA00 Mainly Alpha;Orthogonal Bundle;Globin-like;Histidine kinase N-terminal domain 0.7465 27 166 1.10.490.70
af_O06829_282_413_1.10.10.2840 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;PucR C-terminal helix-turn-helix domain 0.7373 281 396 1.10.10.2840
af_O06807_278_403_1.10.10.2840 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;PucR C-terminal helix-turn-helix domain 0.7357 277 397 1.10.10.2840
ID Description Score Start End GO Terms
AF-A0A401M3T6-F1-model_v4 Regulatory protein 0.9553 290 402
AF-A0A0N1GLF2-F1-model_v4 Putative transcriptional regulator, PucR family 0.9473 302 395
AF-A0A6B2DYX0-F1-model_v4 PucR family transcriptional regulator 0.9308 19 150
AF-A0A433IKN3-F1-model_v4 PucR family transcriptional regulator 0.9308 294 402
AF-R1I4P7-F1-model_v4 PucR C-terminal helix-turn-helix domain-containing protein 0.9253 263 402

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pLDDT pTM Quality
90.62 0.79 High
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Predicted Structure (AlphaFold2)

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