F360020
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 248 | 187 | 496 | 316 |
Family's Representative Sequence
| Representative Sequence | 3300034816|Ga0373930_0003380|Ga0373930_0003380_428_1504 |
| Length | 358 |
| Sequence | VLKLERNGRKERKETQRRGRRPAARTFALLRSLRFAPTSPTPDGYGDGNSRSLFMRSEIARVHDIIRPYIRETPVLATSGSDVGRAPFPLTLKLEFLQHSGSFKVRGAFANLLTRPIPPAGVAAASGGNHGAAVAHAAMRLGIPARIFVPTVVSAAKLARIRACGATVVVSGDRYADALDASERYVAASQALPIHAFDQMETLLGQGTVARELDAQVPDAATVIVAVGGGGFIGGVAAWYAGVKTRIVGVEPVNAPTLTEALKAGKPVDAPAGGVAVDSLAPRRVGVLMFPIAQQSIDRVLLVDDDEIVRAQAVLWDAYRIVVEPGGAAAFAALLAGRYTPSRDEHVVVVLCGGNLER |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300034816 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 | Metagenome | Rhizosphere |
| 2 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 3 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 4 | 3300003856 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz | Metagenome | Rhizosphere |
| 5 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 6 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 7 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 8 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 17 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 26 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 27 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 28 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 29 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 30 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 31 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 32 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 33 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 34 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 35 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 37 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 38 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 39 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 40 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 41 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 42 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 43 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 44 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 45 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 46 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 48 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300021321 | Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 | Metagenome | Nodule |
| 55 | 3300021327 | Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 | Metagenome | Nodule |
| 56 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 57 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 78 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 80 | 3300030733 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 | Metagenome | Rhizosphere |
| 81 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 82 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 83 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 84 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 85 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 86 | 3300034817 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 | Metagenome | Rhizosphere |
| 87 | 3300034819 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 | Metagenome | Rhizosphere |
| 88 | 3300034820 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 | Metagenome | Rhizosphere |
| 89 | 3300034957 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 | Metagenome | Rhizosphere |
| 90 | 3300035084 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 | Metagenome | Rhizosphere |
| 91 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 92 | 3300035088 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 | Metagenome | Rhizosphere |
| 93 | 3300035090 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 | Metagenome | Rhizosphere |
| 94 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 95 | 3300035092 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 | Metagenome | Rhizosphere |
| 96 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 97 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 98 | 3300035115 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 | Metagenome | Rhizosphere |
| 99 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 100 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 101 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 102 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 103 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 104 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 105 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 106 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 107 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 108 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 109 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 110 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 111 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 112 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 113 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 114 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 115 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 116 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 117 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 139 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 140 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 141 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 142 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 143 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 144 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 145 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 146 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 147 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 148 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 149 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 150 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 151 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 152 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 153 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 154 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 155 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 156 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 157 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 158 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 159 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 160 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 161 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 162 | 2503198000 | Mesorhizobium opportunistum WSM2075 | Isolate | Nodule |
| 163 | 2508501122 | Ensifer yinggardensis WSM1721 | Isolate | Nodule |
| 164 | 2509276019 | Ensifer aridi TW10 | Isolate | Nodule |
| 165 | 2512047086 | Sinorhizobium arboris LMG 14919 | Isolate | Nodule |
| 166 | 2558860100 | Sinorhizobium sp. PC2 | Isolate | Nodule |
| 167 | 2615840698 | Rhizobium multihospitium HAMBI 2975 | Isolate | Nodule |
| 168 | 2643221627 | Mesorhizobium sp. Root102 | Isolate | Unclassified |
| 169 | 2675903059 | Asanoa hainanensis CGMCC 4.5593 | Isolate | Rhizosphere |
| 170 | 2738541272 | Promicromonospora sp. AC04 | Isolate | Unclassified |
| 171 | 2738543027 | Promicromonospora sp. CF082 | Isolate | Unclassified |
| 172 | 2739367654 | Promicromonospora sp. YR516 | Isolate | Unclassified |
| 173 | 2758568522 | Promicromonospora thailandica SAI-039 | Isolate | Unclassified |
| 174 | 2808606394 | Promicromonospora sp. C35 | Isolate | Unclassified |
| 175 | 2850079185 | Ensifer aridi JNVU TP6 | Isolate | Unclassified |
| 176 | 2852387548 | Rhizobium jaguaris CCGE525 | Isolate | Unclassified |
| 177 | 2889790730 | Chelativorans xinjiangense lm93 | Isolate | Rhizosphere |
| 178 | 2889914905 | Chelativorans alearense UJN715 | Isolate | Rhizosphere |
| 179 | 2937891427 | Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1 | Isolate | Nodule |
| 180 | 2968091066 | Mesorhizobium sp. AA23 | Isolate | Unclassified |
| 181 | 2977858184 | Mesorhizobium sp. M1A.F.Ca.IN.020.03.1.1 | Isolate | Nodule |
| 182 | 3000135777 | Unclassified bacterium M00.F.Ca.ET.205.01.1.1 | Isolate | Unclassified |
| 183 | 3005416602 | Rhizobium sp. P40RR-XXII | Isolate | Rhizosphere |
| 184 | 8004445564 | Mesorhizobium sp. M1A.F.Ca.IN.020.04.1.1 | Isolate | Nodule |
| 185 | 8005314921 | Rhizobium sp. P28RR-XV | Isolate | Rhizosphere |
| 186 | 8005484373 | Rhizobium tropici SARCC-755 | Isolate | Nodule |
| 187 | 8005682033 | Rhizobium dioscoreae S-93 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.52 |
| Metatranscriptomes | 0 |
| Isolates | 10.48 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.44 |
| Nodule | 4.84 |
| Rhizoplane | 4.44 |
| Rhizosphere | 79.44 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.02 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0373930_0003380 | 3300034816 | Bacteria | 2525 |
| 2 | rootH1_10033555 | 3300003323 | Bacteria | 3077 |
| 3 | Ga0055539_1002381 | 3300003752 | Bacteria | 2907 |
| 4 | Ga0058692_1014203 | 3300003856 | Bacteria | 1830 |
| 5 | Ga0065715_10128647 | 3300005293 | Bacteria | 2061 |
| 6 | Ga0070690_100031315 | 3300005330 | Bacteria | 3312 |
| 7 | Ga0068869_100104715 | 3300005334 | Bacteria | 2145 |
| 8 | Ga0070691_10117539 | 3300005341 | Bacteria | 1335 |
| 9 | Ga0070669_100208947 | 3300005353 | Bacteria | 1539 |
| 10 | Ga0070688_100022467 | 3300005365 | Bacteria | 3697 |
| 11 | Ga0070714_100152548 | 3300005435 | Bacteria | 2083 |
| 12 | Ga0070713_100007878 | 3300005436 | Bacteria | 7516 |
| 13 | Ga0070708_100014069 | 3300005445 | Bacteria | 6575 |
| 14 | Ga0070708_100087127 | 3300005445 | Bacteria | 2837 |
| 15 | Ga0070663_100032004 | 3300005455 | Bacteria | 3621 |
| 16 | Ga0070678_100286170 | 3300005456 | Bacteria | 1396 |
| 17 | Ga0070685_10066033 | 3300005466 | Bacteria | 2131 |
| 18 | Ga0070707_100079078 | 3300005468 | Bacteria | 3173 |
| 19 | Ga0070707_100203242 | 3300005468 | Bacteria | 1931 |
| 20 | Ga0070707_100467565 | 3300005468 | Bacteria | 1222 |
| 21 | Ga0070698_100402625 | 3300005471 | Bacteria | 1302 |
| 22 | Ga0070672_100009176 | 3300005543 | Bacteria | 6807 |
| 23 | Ga0070693_100014000 | 3300005547 | Bacteria | 4098 |
| 24 | Ga0070693_100016969 | 3300005547 | Bacteria | 3777 |
| 25 | Ga0070704_100043381 | 3300005549 | Bacteria | 3117 |
| 26 | Ga0070704_100070319 | 3300005549 | Bacteria | 2539 |
| 27 | Ga0068854_100208178 | 3300005578 | Bacteria | 1541 |
| 28 | Ga0068856_100061167 | 3300005614 | Bacteria | 3720 |
| 29 | Ga0070702_100085095 | 3300005615 | Bacteria | 1903 |
| 30 | Ga0070702_100099502 | 3300005615 | Bacteria | 1781 |
| 31 | Ga0068852_100352296 | 3300005616 | Bacteria | 1438 |
| 32 | Ga0068859_100293309 | 3300005617 | Bacteria | 1719 |
| 33 | Ga0068859_100592853 | 3300005617 | Bacteria | 1202 |
| 34 | Ga0068864_100168940 | 3300005618 | Bacteria | 1993 |
| 35 | Ga0068861_100021789 | 3300005719 | Bacteria | 4608 |
| 36 | Ga0068861_100024639 | 3300005719 | Unclassified | 4354 |
| 37 | Ga0068861_100460414 | 3300005719 | Bacteria | 1141 |
| 38 | Ga0068863_100042799 | 3300005841 | Bacteria | 4302 |
| 39 | Ga0068863_100180662 | 3300005841 | Bacteria | 2025 |
| 40 | Ga0068858_100025532 | 3300005842 | Bacteria | 5497 |
| 41 | Ga0068862_100055695 | 3300005844 | Bacteria | 3387 |
| 42 | Ga0081455_10101591 | 3300005937 | Bacteria | 2308 |
| 43 | Ga0081540_1005660 | 3300005983 | Bacteria | 9291 |
| 44 | Ga0081540_1009390 | 3300005983 | Bacteria | 6744 |
| 45 | Ga0081539_10023308 | 3300005985 | Bacteria | 4059 |
| 46 | Ga0081539_10046737 | 3300005985 | Bacteria | 2478 |
| 47 | Ga0070717_10003791 | 3300006028 | Bacteria | 10866 |
| 48 | Ga0070717_10102973 | 3300006028 | Bacteria | 2426 |
| 49 | Ga0070717_10214174 | 3300006028 | Bacteria | 1692 |
| 50 | Ga0075368_10030582 | 3300006042 | Bacteria | 2085 |
| 51 | Ga0075364_10005897 | 3300006051 | Bacteria | 7157 |
| 52 | Ga0070715_10000089 | 3300006163 | Bacteria | 22377 |
| 53 | Ga0075367_10001096 | 3300006178 | Bacteria | 11190 |
| 54 | Ga0075366_10003558 | 3300006195 | Bacteria | 8239 |
| 55 | Ga0075428_100051761 | 3300006844 | Bacteria | 4503 |
| 56 | Ga0075428_100052143 | 3300006844 | Bacteria | 4485 |
| 57 | Ga0075428_100202246 | 3300006844 | Bacteria | 2147 |
| 58 | Ga0075428_100255712 | 3300006844 | Bacteria | 1887 |
| 59 | Ga0075430_100073142 | 3300006846 | Bacteria | 2874 |
| 60 | Ga0075430_100220457 | 3300006846 | Bacteria | 1574 |
| 61 | Ga0075431_100037649 | 3300006847 | Bacteria | 4981 |
| 62 | Ga0075431_100093379 | 3300006847 | Bacteria | 3105 |
| 63 | Ga0075431_100258492 | 3300006847 | Bacteria | 1768 |
| 64 | Ga0075434_100063348 | 3300006871 | Bacteria | 3680 |
| 65 | Ga0075434_100374815 | 3300006871 | Bacteria | 1444 |
| 66 | Ga0075429_100070231 | 3300006880 | Bacteria | 3049 |
| 67 | Ga0075429_100083906 | 3300006880 | Bacteria | 2777 |
| 68 | Ga0097620_100293305 | 3300006931 | Bacteria | 1719 |
| 69 | Ga0097620_100592869 | 3300006931 | Bacteria | 1202 |
| 70 | Ga0075435_100000792 | 3300007076 | Bacteria | 19649 |
| 71 | Ga0075435_100001849 | 3300007076 | Bacteria | 13741 |
| 72 | Ga0105240_10061709 | 3300009093 | Bacteria | 4670 |
| 73 | Ga0105240_10113904 | 3300009093 | Bacteria | 3267 |
| 74 | Ga0111539_10009648 | 3300009094 | Bacteria | 12185 |
| 75 | Ga0105245_10028839 | 3300009098 | Bacteria | 4898 |
| 76 | Ga0114129_10002301 | 3300009147 | Bacteria | 26486 |
| 77 | Ga0114129_10048949 | 3300009147 | Bacteria | 5940 |
| 78 | Ga0114129_10299096 | 3300009147 | Bacteria | 2145 |
| 79 | Ga0157369_10001418 | 3300013105 | Bacteria | 29458 |
| 80 | Ga0157376_10089111 | 3300014969 | Bacteria | 2667 |
| 81 | Ga0214542_1017188 | 3300021321 | Bacteria | 6655 |
| 82 | Ga0214543_1003948 | 3300021327 | Bacteria | 28458 |
| 83 | Ga0213875_10000683 | 3300021388 | Bacteria | 26533 |
| 84 | Ga0209148_1007057 | 3300025254 | Bacteria | 2367 |
| 85 | Ga0207699_10035837 | 3300025906 | Bacteria | 2825 |
| 86 | Ga0207646_10181179 | 3300025922 | Bacteria | 1903 |
| 87 | Ga0207646_10248072 | 3300025922 | Bacteria | 1608 |
| 88 | Ga0207681_10366916 | 3300025923 | Bacteria | 1156 |
| 89 | Ga0207700_10004130 | 3300025928 | Bacteria | 8521 |
| 90 | Ga0207664_10000434 | 3300025929 | Bacteria | 29862 |
| 91 | Ga0207664_10028283 | 3300025929 | Bacteria | 4259 |
| 92 | Ga0207644_10039624 | 3300025931 | Bacteria | 3326 |
| 93 | Ga0207644_10403296 | 3300025931 | Bacteria | 1118 |
| 94 | Ga0207706_10028853 | 3300025933 | Bacteria | 4954 |
| 95 | Ga0207670_10147516 | 3300025936 | Bacteria | 1741 |
| 96 | Ga0207665_10001322 | 3300025939 | Bacteria | 16709 |
| 97 | Ga0207691_10003878 | 3300025940 | Bacteria | 14517 |
| 98 | Ga0207691_10014544 | 3300025940 | Bacteria | 7504 |
| 99 | Ga0207689_10013258 | 3300025942 | Bacteria | 7031 |
| 100 | Ga0207689_10038428 | 3300025942 | Bacteria | 3964 |
| 101 | Ga0207651_10001680 | 3300025960 | Bacteria | 10178 |
| 102 | Ga0207677_10030543 | 3300026023 | Bacteria | 3441 |
| 103 | Ga0207702_10168862 | 3300026078 | Bacteria | 2004 |
| 104 | Ga0207648_10003047 | 3300026089 | Bacteria | 17711 |
| 105 | Ga0207675_100048612 | 3300026118 | Bacteria | 3960 |
| 106 | Ga0207683_10086395 | 3300026121 | Bacteria | 2789 |
| 107 | Ga0207698_10110629 | 3300026142 | Unclassified | 2301 |
| 108 | Ga0209371_1007550 | 3300027312 | Bacteria | 3765 |
| 109 | Ga0207428_10000325 | 3300027907 | Bacteria | 61954 |
| 110 | Ga0207428_10268929 | 3300027907 | Bacteria | 1268 |
| 111 | Ga0268264_10279811 | 3300028381 | Bacteria | 1562 |
| 112 | Ga0268264_10305368 | 3300028381 | Bacteria | 1499 |
| 113 | Ga0268256_1003767 | 3300030500 | Bacteria | 6641 |
| 114 | Ga0314311_1106992 | 3300030733 | Bacteria | 1303 |
| 115 | Ga0265327_10021956 | 3300031251 | Bacteria | 3834 |
| 116 | Ga0307516_10001560 | 3300031730 | Bacteria | 31520 |
| 117 | Ga0307407_10097535 | 3300031903 | Bacteria | 1817 |
| 118 | Ga0307416_100033004 | 3300032002 | Bacteria | 3919 |
| 119 | Ga0307415_100022535 | 3300032126 | Bacteria | 3889 |
| 120 | Ga0373948_0000242 | 3300034817 | Bacteria | 6511 |
| 121 | Ga0373958_0000947 | 3300034819 | Bacteria | 3756 |
| 122 | Ga0373959_0015296 | 3300034820 | Bacteria | 1407 |
| 123 | Ga0373938_0000433 | 3300034957 | Bacteria | 6770 |
| 124 | Ga0373928_0001500 | 3300035084 | Bacteria | 4540 |
| 125 | Ga0373934_0006960 | 3300035086 | Bacteria | 4195 |
| 126 | Ga0373940_0001303 | 3300035088 | Bacteria | 4441 |
| 127 | Ga0373949_0000719 | 3300035090 | Bacteria | 10752 |
| 128 | Ga0373951_0000873 | 3300035091 | Bacteria | 8143 |
| 129 | Ga0373952_0000352 | 3300035092 | Bacteria | 7781 |
| 130 | Ga0373932_0000659 | 3300035112 | Bacteria | 10501 |
| 131 | Ga0373939_0002756 | 3300035114 | Bacteria | 4120 |
| 132 | Ga0373941_0009901 | 3300035115 | Bacteria | 2416 |
| 133 | Ga0373953_0022260 | 3300035117 | Bacteria | 2388 |
| 134 | Ga0373956_0054613 | 3300035119 | Bacteria | 1800 |
| 135 | Ga0373960_0003111 | 3300035121 | Bacteria | 3747 |
| 136 | Ga0373942_0016071 | 3300035207 | Bacteria | 1832 |
| 137 | Ga0373961_0002234 | 3300035241 | Bacteria | 5099 |
| 138 | Ga0373962_0005899 | 3300035242 | Bacteria | 2957 |
| 139 | Ga0373931_0127024 | 3300035691 | Bacteria | 1463 |
| 140 | Ga0373935_0028285 | 3300035692 | Bacteria | 3465 |
| 141 | Ga0373935_0113054 | 3300035692 | Bacteria | 1804 |
| 142 | Ga0373933_0019328 | 3300035724 | Bacteria | 3846 |
| 143 | Ga0373933_0029689 | 3300035724 | Bacteria | 3163 |
| 144 | Ga0373937_0007597 | 3300036401 | Bacteria | 9390 |
| 145 | Ga0373937_0014863 | 3300036401 | Bacteria | 6875 |
| 146 | Ga0373937_0058717 | 3300036401 | Bacteria | 3534 |
| 147 | Ga0373937_0203599 | 3300036401 | Bacteria | 1861 |
| 148 | Ga0373925_0001067 | 3300037068 | Bacteria | 24761 |
| 149 | Ga0373925_0276981 | 3300037068 | Bacteria | 1351 |
| 150 | Ga0395899_0000026 | 3300037312 | Bacteria | 345291 |
| 151 | Ga0395905_0005147 | 3300037471 | Bacteria | 13418 |
| 152 | Ga0436361_0575103 | 3300039447 | Unclassified | 2692 |
| 153 | Ga0466971_0055808 | 3300044719 | Bacteria | 1781 |
| 154 | Ga0466957_0014719 | 3300044842 | Bacteria | 4558 |
| 155 | Ga0451576_0024962 | 3300045051 | Bacteria | 6447 |
| 156 | Ga0466967_0270724 | 3300045976 | Bacteria | 1628 |
| 157 | Ga0495627_012811 | 3300046453 | Bacteria | 2964 |
| 158 | Ga0495592_0379681 | 3300046454 | Bacteria | 899 |
| 159 | Ga0495651_0036307 | 3300046462 | Bacteria | 3836 |
| 160 | Ga0495650_0076960 | 3300046471 | Bacteria | 1295 |
| 161 | Ga0495664_0046984 | 3300046477 | Bacteria | 2561 |
| 162 | Ga0495664_0126114 | 3300046477 | Bacteria | 1549 |
| 163 | Ga0495608_0000792 | 3300046511 | Bacteria | 22187 |
| 164 | Ga0495628_0066204 | 3300046516 | Bacteria | 2824 |
| 165 | Ga0495628_0326601 | 3300046516 | Bacteria | 1131 |
| 166 | Ga0495652_0147256 | 3300046529 | Bacteria | 1844 |
| 167 | Ga0495640_0126377 | 3300046533 | Bacteria | 1658 |
| 168 | Ga0495645_0028724 | 3300046543 | Bacteria | 4042 |
| 169 | Ga0495645_0155829 | 3300046543 | Bacteria | 1582 |
| 170 | Ga0495667_0006611 | 3300046559 | Bacteria | 7873 |
| 171 | Ga0495635_0013322 | 3300046663 | Bacteria | 5755 |
| 172 | Ga0495635_0046270 | 3300046663 | Bacteria | 3002 |
| 173 | Ga0495657_0026211 | 3300046675 | Bacteria | 4129 |
| 174 | Ga0495657_0038440 | 3300046675 | Bacteria | 3293 |
| 175 | Ga0495599_0118616 | 3300046678 | Bacteria | 1645 |
| 176 | Ga0495646_0082394 | 3300046680 | Bacteria | 1872 |
| 177 | Ga0495646_0189401 | 3300046680 | Bacteria | 1125 |
| 178 | Ga0495600_0012856 | 3300046809 | Bacteria | 5244 |
| 179 | Ga0495604_0033718 | 3300047317 | Bacteria | 4052 |
| 180 | Ga0495604_0110162 | 3300047317 | Bacteria | 2009 |
| 181 | Ga0495680_0002589 | 3300047322 | Bacteria | 18416 |
| 182 | Ga0495680_0025258 | 3300047322 | Bacteria | 4920 |
| 183 | Ga0495675_0013711 | 3300047444 | Bacteria | 5123 |
| 184 | Ga0495675_0014383 | 3300047444 | Bacteria | 4999 |
| 185 | Ga0495684_0049740 | 3300047471 | Bacteria | 3202 |
| 186 | Ga0495602_0013159 | 3300048088 | Bacteria | 8464 |
| 187 | Ga0495602_0043593 | 3300048088 | Bacteria | 4077 |
| 188 | Ga0496102_0040438 | 3300048905 | Bacteria | 4218 |
| 189 | Ga0496102_0287751 | 3300048905 | Unclassified | 1549 |
| 190 | Ga0496104_0008746 | 3300048907 | Bacteria | 9002 |
| 191 | Ga0496105_0020399 | 3300048908 | Bacteria | 5355 |
| 192 | Ga0496108_0021390 | 3300048911 | Bacteria | 5316 |
| 193 | Ga0496109_0024389 | 3300048912 | Bacteria | 5377 |
| 194 | Ga0496109_0709868 | 3300048912 | Bacteria | 943 |
| 195 | Ga0496112_0000776 | 3300048915 | Bacteria | 22480 |
| 196 | Ga0496112_0480544 | 3300048915 | Unclassified | 1179 |
| 197 | Ga0496113_0002433 | 3300048916 | Bacteria | 10822 |
| 198 | Ga0496115_0018946 | 3300048918 | Bacteria | 5294 |
| 199 | Ga0496121_0022544 | 3300048924 | Bacteria | 6104 |
| 200 | Ga0496121_0072523 | 3300048924 | Bacteria | 2764 |
| 201 | Ga0496121_0177684 | 3300048924 | Bacteria | 1540 |
| 202 | nmdc:mga00v17_117031_c1 | 3300050491 | Bacteria | 1695 |
| 203 | nmdc:mga0k408_841_c1 | 3300050493 | Bacteria | 16934 |
| 204 | nmdc:mga06z11_8035_c1 | 3300050494 | Bacteria | 4374 |
| 205 | nmdc:mga05p37_451796_c1 | 3300050507 | Bacteria | 1487 |
| 206 | nmdc:mga09592_11189_c1 | 3300050508 | Bacteria | 7302 |
| 207 | nmdc:mga09592_33603_c1 | 3300050508 | Bacteria | 4283 |
| 208 | nmdc:mga0qj67_23282_c1 | 3300050509 | Bacteria | 4763 |
| 209 | nmdc:mga0qj67_35311_c1 | 3300050509 | Bacteria | 3908 |
| 210 | nmdc:mga06r32_11735_c2 | 3300050510 | Bacteria | 5777 |
| 211 | nmdc:mga06r32_235045_c1 | 3300050510 | Bacteria | 1820 |
| 212 | nmdc:mga06r32_39033_c1 | 3300050510 | Bacteria | 4504 |
| 213 | nmdc:mga06r32_99488_c1 | 3300050510 | Bacteria | 2852 |
| 214 | nmdc:mga08y16_57969_c1 | 3300050511 | Bacteria | 4047 |
| 215 | nmdc:mga08y16_7128_c1 | 3300050511 | Bacteria | 11730 |
| 216 | nmdc:mga0n895_72873_c1 | 3300050512 | Bacteria | 3408 |
| 217 | nmdc:mga0rr50_315079_c1 | 3300050513 | Bacteria | 1311 |
| 218 | nmdc:mga0a205_288957_c1 | 3300050515 | Bacteria | 1514 |
| 219 | Ga0495595_0024761 | 3300053084 | Bacteria | 2653 |
| 220 | Ga0495619_0027716 | 3300053085 | Bacteria | 3652 |
| 221 | Ga0500646_0036472 | 3300053090 | Bacteria | 1370 |
| 222 | Ga0500568_0028542 | 3300053139 | Bacteria | 2326 |
| 223 | 2503199616 | 2503198000 | Bacteria | 6884444 |
| 224 | 2509108272 | 2508501122 | Bacteria | 6292184 |
| 225 | 2509376026 | 2509276019 | Bacteria | 6802256 |
| 226 | 2512530533 | 2512047086 | Bacteria | 6850303 |
| 227 | 2558862029 | 2558860100 | Bacteria | 8458965 |
| 228 | 2616553691 | 2615840698 | Bacteria | 7319877 |
| 229 | 2644153637 | 2643221627 | Bacteria | 6761570 |
| 230 | 2676484424 | 2675903059 | Bacteria | 8644972 |
| 231 | 2738696248 | 2738541272 | Bacteria | 6848551 |
| 232 | 2739325044 | 2738543027 | Bacteria | 6409078 |
| 233 | 2739605811 | 2739367654 | Bacteria | 6049412 |
| 234 | 2760307341 | 2758568522 | Bacteria | 5953541 |
| 235 | 2809029051 | 2808606394 | Bacteria | 6248540 |
| 236 | 2850083951 | 2850079185 | Bacteria | 6848280 |
| 237 | 2852388808 | 2852387548 | Bacteria | 8025568 |
| 238 | 2889791000 | 2889790730 | Bacteria | 5689708 |
| 239 | 2889915393 | 2889914905 | Bacteria | 5702301 |
| 240 | 2937893802 | 2937891427 | Bacteria | 6357007 |
| 241 | 2968091421 | 2968091066 | Bacteria | 6052692 |
| 242 | 2977863655 | 2977858184 | Bacteria | 6215359 |
| 243 | 3000141313 | 3000135777 | Bacteria | 6891109 |
| 244 | 3005417610 | 3005416602 | Bacteria | 7064308 |
| 245 | 8004449961 | 8004445564 | Bacteria | 6322258 |
| 246 | 8005314965 | 8005314921 | Bacteria | 7072929 |
| 247 | 8005485870 | 8005484373 | Bacteria | 6297373 |
| 248 | 8005684845 | 8005682033 | Bacteria | 6726518 |
| 249 | Ga0373930_0003380 | |||
| 250 | rootH1_10033555 | |||
| 251 | Ga0055539_1002381 | |||
| 252 | Ga0058692_1014203 | |||
| 253 | Ga0065715_10128647 | |||
| 254 | Ga0070690_100031315 | |||
| 255 | Ga0068869_100104715 | |||
| 256 | Ga0070691_10117539 | |||
| 257 | Ga0070669_100208947 | |||
| 258 | Ga0070688_100022467 | |||
| 259 | Ga0070714_100152548 | |||
| 260 | Ga0070713_100007878 | |||
| 261 | Ga0070708_100014069 | |||
| 262 | Ga0070708_100087127 | |||
| 263 | Ga0070663_100032004 | |||
| 264 | Ga0070678_100286170 | |||
| 265 | Ga0070685_10066033 | |||
| 266 | Ga0070707_100079078 | |||
| 267 | Ga0070707_100203242 | |||
| 268 | Ga0070707_100467565 | |||
| 269 | Ga0070698_100402625 | |||
| 270 | Ga0070672_100009176 | |||
| 271 | Ga0070693_100014000 | |||
| 272 | Ga0070693_100016969 | |||
| 273 | Ga0070704_100043381 | |||
| 274 | Ga0070704_100070319 | |||
| 275 | Ga0068854_100208178 | |||
| 276 | Ga0068856_100061167 | |||
| 277 | Ga0070702_100085095 | |||
| 278 | Ga0070702_100099502 | |||
| 279 | Ga0068852_100352296 | |||
| 280 | Ga0068859_100293309 | |||
| 281 | Ga0068859_100592853 | |||
| 282 | Ga0068864_100168940 | |||
| 283 | Ga0068861_100021789 | |||
| 284 | Ga0068861_100024639 | |||
| 285 | Ga0068861_100460414 | |||
| 286 | Ga0068863_100042799 | |||
| 287 | Ga0068863_100180662 | |||
| 288 | Ga0068858_100025532 | |||
| 289 | Ga0068862_100055695 | |||
| 290 | Ga0081455_10101591 | |||
| 291 | Ga0081540_1005660 | |||
| 292 | Ga0081540_1009390 | |||
| 293 | Ga0081539_10023308 | |||
| 294 | Ga0081539_10046737 | |||
| 295 | Ga0070717_10003791 | |||
| 296 | Ga0070717_10102973 | |||
| 297 | Ga0070717_10214174 | |||
| 298 | Ga0075368_10030582 | |||
| 299 | Ga0075364_10005897 | |||
| 300 | Ga0070715_10000089 | |||
| 301 | Ga0075367_10001096 | |||
| 302 | Ga0075366_10003558 | |||
| 303 | Ga0075428_100051761 | |||
| 304 | Ga0075428_100052143 | |||
| 305 | Ga0075428_100202246 | |||
| 306 | Ga0075428_100255712 | |||
| 307 | Ga0075430_100073142 | |||
| 308 | Ga0075430_100220457 | |||
| 309 | Ga0075431_100037649 | |||
| 310 | Ga0075431_100093379 | |||
| 311 | Ga0075431_100258492 | |||
| 312 | Ga0075434_100063348 | |||
| 313 | Ga0075434_100374815 | |||
| 314 | Ga0075429_100070231 | |||
| 315 | Ga0075429_100083906 | |||
| 316 | Ga0097620_100293305 | |||
| 317 | Ga0097620_100592869 | |||
| 318 | Ga0075435_100000792 | |||
| 319 | Ga0075435_100001849 | |||
| 320 | Ga0105240_10061709 | |||
| 321 | Ga0105240_10113904 | |||
| 322 | Ga0111539_10009648 | |||
| 323 | Ga0105245_10028839 | |||
| 324 | Ga0114129_10002301 | |||
| 325 | Ga0114129_10048949 | |||
| 326 | Ga0114129_10299096 | |||
| 327 | Ga0157369_10001418 | |||
| 328 | Ga0157376_10089111 | |||
| 329 | Ga0214542_1017188 | |||
| 330 | Ga0214543_1003948 | |||
| 331 | Ga0213875_10000683 | |||
| 332 | Ga0209148_1007057 | |||
| 333 | Ga0207699_10035837 | |||
| 334 | Ga0207646_10181179 | |||
| 335 | Ga0207646_10248072 | |||
| 336 | Ga0207681_10366916 | |||
| 337 | Ga0207700_10004130 | |||
| 338 | Ga0207664_10000434 | |||
| 339 | Ga0207664_10028283 | |||
| 340 | Ga0207644_10039624 | |||
| 341 | Ga0207644_10403296 | |||
| 342 | Ga0207706_10028853 | |||
| 343 | Ga0207670_10147516 | |||
| 344 | Ga0207665_10001322 | |||
| 345 | Ga0207691_10003878 | |||
| 346 | Ga0207691_10014544 | |||
| 347 | Ga0207689_10013258 | |||
| 348 | Ga0207689_10038428 | |||
| 349 | Ga0207651_10001680 | |||
| 350 | Ga0207677_10030543 | |||
| 351 | Ga0207702_10168862 | |||
| 352 | Ga0207648_10003047 | |||
| 353 | Ga0207675_100048612 | |||
| 354 | Ga0207683_10086395 | |||
| 355 | Ga0207698_10110629 | |||
| 356 | Ga0209371_1007550 | |||
| 357 | Ga0207428_10000325 | |||
| 358 | Ga0207428_10268929 | |||
| 359 | Ga0268264_10279811 | |||
| 360 | Ga0268264_10305368 | |||
| 361 | Ga0268256_1003767 | |||
| 362 | Ga0314311_1106992 | |||
| 363 | Ga0265327_10021956 | |||
| 364 | Ga0307516_10001560 | |||
| 365 | Ga0307407_10097535 | |||
| 366 | Ga0307416_100033004 | |||
| 367 | Ga0307415_100022535 | |||
| 368 | Ga0373948_0000242 | |||
| 369 | Ga0373958_0000947 | |||
| 370 | Ga0373959_0015296 | |||
| 371 | Ga0373938_0000433 | |||
| 372 | Ga0373928_0001500 | |||
| 373 | Ga0373934_0006960 | |||
| 374 | Ga0373940_0001303 | |||
| 375 | Ga0373949_0000719 | |||
| 376 | Ga0373951_0000873 | |||
| 377 | Ga0373952_0000352 | |||
| 378 | Ga0373932_0000659 | |||
| 379 | Ga0373939_0002756 | |||
| 380 | Ga0373941_0009901 | |||
| 381 | Ga0373953_0022260 | |||
| 382 | Ga0373956_0054613 | |||
| 383 | Ga0373960_0003111 | |||
| 384 | Ga0373942_0016071 | |||
| 385 | Ga0373961_0002234 | |||
| 386 | Ga0373962_0005899 | |||
| 387 | Ga0373931_0127024 | |||
| 388 | Ga0373935_0028285 | |||
| 389 | Ga0373935_0113054 | |||
| 390 | Ga0373933_0019328 | |||
| 391 | Ga0373933_0029689 | |||
| 392 | Ga0373937_0007597 | |||
| 393 | Ga0373937_0014863 | |||
| 394 | Ga0373937_0058717 | |||
| 395 | Ga0373937_0203599 | |||
| 396 | Ga0373925_0001067 | |||
| 397 | Ga0373925_0276981 | |||
| 398 | Ga0395899_0000026 | |||
| 399 | Ga0395905_0005147 | |||
| 400 | Ga0436361_0575103 | |||
| 401 | Ga0466971_0055808 | |||
| 402 | Ga0466957_0014719 | |||
| 403 | Ga0451576_0024962 | |||
| 404 | Ga0466967_0270724 | |||
| 405 | Ga0495627_012811 | |||
| 406 | Ga0495592_0379681 | |||
| 407 | Ga0495651_0036307 | |||
| 408 | Ga0495650_0076960 | |||
| 409 | Ga0495664_0046984 | |||
| 410 | Ga0495664_0126114 | |||
| 411 | Ga0495608_0000792 | |||
| 412 | Ga0495628_0066204 | |||
| 413 | Ga0495628_0326601 | |||
| 414 | Ga0495652_0147256 | |||
| 415 | Ga0495640_0126377 | |||
| 416 | Ga0495645_0028724 | |||
| 417 | Ga0495645_0155829 | |||
| 418 | Ga0495667_0006611 | |||
| 419 | Ga0495635_0013322 | |||
| 420 | Ga0495635_0046270 | |||
| 421 | Ga0495657_0026211 | |||
| 422 | Ga0495657_0038440 | |||
| 423 | Ga0495599_0118616 | |||
| 424 | Ga0495646_0082394 | |||
| 425 | Ga0495646_0189401 | |||
| 426 | Ga0495600_0012856 | |||
| 427 | Ga0495604_0033718 | |||
| 428 | Ga0495604_0110162 | |||
| 429 | Ga0495680_0002589 | |||
| 430 | Ga0495680_0025258 | |||
| 431 | Ga0495675_0013711 | |||
| 432 | Ga0495675_0014383 | |||
| 433 | Ga0495684_0049740 | |||
| 434 | Ga0495602_0013159 | |||
| 435 | Ga0495602_0043593 | |||
| 436 | Ga0496102_0040438 | |||
| 437 | Ga0496102_0287751 | |||
| 438 | Ga0496104_0008746 | |||
| 439 | Ga0496105_0020399 | |||
| 440 | Ga0496108_0021390 | |||
| 441 | Ga0496109_0024389 | |||
| 442 | Ga0496109_0709868 | |||
| 443 | Ga0496112_0000776 | |||
| 444 | Ga0496112_0480544 | |||
| 445 | Ga0496113_0002433 | |||
| 446 | Ga0496115_0018946 | |||
| 447 | Ga0496121_0022544 | |||
| 448 | Ga0496121_0072523 | |||
| 449 | Ga0496121_0177684 | |||
| 450 | nmdc:mga00v17_117031_c1 | |||
| 451 | nmdc:mga0k408_841_c1 | |||
| 452 | nmdc:mga06z11_8035_c1 | |||
| 453 | nmdc:mga05p37_451796_c1 | |||
| 454 | nmdc:mga09592_11189_c1 | |||
| 455 | nmdc:mga09592_33603_c1 | |||
| 456 | nmdc:mga0qj67_23282_c1 | |||
| 457 | nmdc:mga0qj67_35311_c1 | |||
| 458 | nmdc:mga06r32_11735_c2 | |||
| 459 | nmdc:mga06r32_235045_c1 | |||
| 460 | nmdc:mga06r32_39033_c1 | |||
| 461 | nmdc:mga06r32_99488_c1 | |||
| 462 | nmdc:mga08y16_57969_c1 | |||
| 463 | nmdc:mga08y16_7128_c1 | |||
| 464 | nmdc:mga0n895_72873_c1 | |||
| 465 | nmdc:mga0rr50_315079_c1 | |||
| 466 | nmdc:mga0a205_288957_c1 | |||
| 467 | Ga0495595_0024761 | |||
| 468 | Ga0495619_0027716 | |||
| 469 | Ga0500646_0036472 | |||
| 470 | Ga0500568_0028542 | |||
| 471 | 2503199616 | |||
| 472 | 2509108272 | |||
| 473 | 2509376026 | |||
| 474 | 2512530533 | |||
| 475 | 2558862029 | |||
| 476 | 2616553691 | |||
| 477 | 2644153637 | |||
| 478 | 2676484424 | |||
| 479 | 2738696248 | |||
| 480 | 2739325044 | |||
| 481 | 2739605811 | |||
| 482 | 2760307341 | |||
| 483 | 2809029051 | |||
| 484 | 2850083951 | |||
| 485 | 2852388808 | |||
| 486 | 2889791000 | |||
| 487 | 2889915393 | |||
| 488 | 2937893802 | |||
| 489 | 2968091421 | |||
| 490 | 2977863655 | |||
| 491 | 3000141313 | |||
| 492 | 3005417610 | |||
| 493 | 8004449961 | |||
| 494 | 8005314965 | |||
| 495 | 8005485870 | |||
| 496 | 8005684845 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2gn2-assembly1.cif.gz_A | crystal structure of tetrameric biodegradative threonine deaminase (tdcb) from salmonella typhimurium in complex with cmp at 2.5a resolution (hexagonal form) | 0.919 | 1 | 308 |
| 3iau-assembly1.cif.gz_A | the structure of the processed form of threonine deaminase isoform 2 from solanum lycopersicum | 0.9131 | 10 | 308 |
| 5cvc-assembly1.cif.gz_A | structure of maize serine racemase | 0.9072 | 6 | 308 |
| 1ve5-assembly1.cif.gz_A | crystal structure of t.th. hb8 threonine deaminase | 0.9054 | 8 | 312 |
| 6zsp-assembly1.cif.gz_AAA | human serine racemase bound to atp and malonate. | 0.9041 | 6 | 307 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2G0V4_40_140_3.40.50.1100 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9594 | 75 | 147 | 3.40.50.1100 |
| 1pwhA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9575 | 75 | 148 | 3.40.50.1100 |
| af_Q9VHF0_106_202_3.40.50.1100 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9536 | 57 | 150 | 3.40.50.1100 |
| 3vc3B02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9515 | 75 | 148 | 3.40.50.1100 |
| 2gn1B02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9361 | 58 | 150 | 3.40.50.1100 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A528ARW6-F1-model_v4 | Pyridoxal-phosphate dependent enzyme | 0.9945 | 163 | 309 |
GO:0003941
GO:0004794 GO:0006565 GO:0006567 GO:0009097 GO:0016020 |
| AF-A0A402AUQ8-F1-model_v4 | Tryptophan synthase beta chain-like PALP domain-containing protein | 0.985 | 122 | 309 |
GO:0003941
GO:0004794 GO:0006565 GO:0006567 GO:0009097 |
| AF-A0A4Q3IRB7-F1-model_v4 | Pyridoxal-phosphate dependent enzyme | 0.977 | 123 | 308 |
GO:0003941
GO:0004794 GO:0006565 GO:0006567 GO:0009097 |
| AF-A0A2A3DHL2-F1-model_v4 | Threonine dehydratase (EC 4.3.1.19) | 0.9743 | 1 | 309 |
GO:0003941
GO:0004794 GO:0006565 GO:0006567 GO:0009097 GO:0030170 |
| AF-A0A2X2KCY3-F1-model_v4 | Threonine deaminase | 0.9741 | 74 | 170 |
GO:0003941
GO:0004794 GO:0006565 GO:0006567 GO:0009097 |