F359978

General Info

Members Datasets Scaffolds Average Seq Length
248 154 228 260

Family's Representative Sequence

Representative Sequence 3300030521|Ga0307511_10000264|Ga0307511_1000026410
Length 293
Sequence MLIKKYRRRISHKPILIAIFKDLIMQLLKDKIIFLTGGSKGIGLECAKKYIEAGALVMVAANDAASLAGSIELLGNKSRGILCDVSRSVDVEDAIRLTLENYGRIDVIHNNAGIAHPSRPVHQTEETEWDALFDTNLKSIFFTTRYGLEALKLSEGCILNTSSLVGEIGQENHAAYAATKGAINALTKSMALDYAPYKIRVNAVAPAGVWTPMLREWGQSRKDAADIERYLDGIHALGYCPEGDVVADACVFLVSEKARFITGNILPVSGGAELGYRRILYPGPAAEKINDNF

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
3 2738541283 Pedobacter sp. OK701 Isolate Unclassified
4 2738541284 Pedobacter sp. YR016 Isolate Unclassified
5 2738541302 Pedobacter sp. CF074 Isolate Unclassified
6 2739367656 Pedobacter sp. CF523 Isolate Unclassified
7 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
8 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
9 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
10 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
11 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
12 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
13 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
14 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
15 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
16 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
17 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
18 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
19 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
20 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
21 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
22 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
23 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
24 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
25 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
26 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
27 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
28 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
29 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
30 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
31 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
32 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
33 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
34 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
35 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
36 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
37 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
38 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
39 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
40 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
41 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
65 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
66 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
69 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
70 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
72 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
73 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
79 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
98 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
99 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
102 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
103 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
104 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
107 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
112 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
113 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
114 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
115 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
116 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
117 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
118 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
119 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
120 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
121 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
124 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
125 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
126 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
127 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
128 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
134 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
140 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
141 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
142 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
143 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
144 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
145 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
146 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
147 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
148 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
149 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
152 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.94
Metatranscriptomes 0
Isolates 8.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.95
Nodule 0
Rhizoplane 0
Rhizosphere 60.89
Stem 0
Stem Tuber 0
Unclassified 20.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_320635 2162886007 Bacteria 15481
2 JGI24740J21852_10008868 3300001979 Bacteria 3981
3 JGI25162J39368_1000121 3300002737 Bacteria 85899
4 JGI25154J39366_1000012 3300002738 Bacteria 287601
5 JGI25153J46596_10005344 3300003215 Bacteria 6747
6 rootH2_10162856 3300003320 Bacteria 5435
7 rootH2_10273262 3300003320 Bacteria 1489
8 rootL2_10027620 3300003322 Bacteria 4986
9 rootL2_10056736 3300003322 Bacteria 9615
10 rootL2_10178307 3300003322 Bacteria 4287
11 rootH1_10056351 3300003323 Bacteria 5893
12 rootH1_10224846 3300003323 Unclassified 1253
13 rootH1_10374247 3300003323 Unclassified 2861
14 JGI25160J50197_1005023 3300003354 Bacteria 5595
15 JGI25160J50197_1010759 3300003354 Bacteria 3287
16 Ga0055535_1002349 3300003761 Bacteria 6834
17 Ga0055542_1006479 3300003762 Bacteria 2497
18 Ga0055526_1007559 3300003771 Bacteria 5616
19 Ga0055528_1000120 3300003790 Bacteria 62209
20 Ga0055530_10012684 3300003791 Unclassified 2923
21 Ga0055531_10000102 3300003794 Bacteria 92703
22 Ga0055531_10046730 3300003794 Unclassified 1186
23 Ga0065165_1000012 3300005262 Bacteria 303241
24 Ga0065165_1039159 3300005262 Bacteria 1422
25 Ga0065165_1068911 3300005262 Unclassified 945
26 Ga0065714_10003685 3300005288 Bacteria 6384
27 Ga0065714_10005255 3300005288 Bacteria 4039
28 Ga0065714_10140859 3300005288 Bacteria 1172
29 Ga0065704_10000252 3300005289 Bacteria 51507
30 Ga0065704_10086798 3300005289 Bacteria 3082
31 Ga0065704_10093639 3300005289 Bacteria 2585
32 Ga0070666_10012864 3300005335 Bacteria 5292
33 Ga0070707_100142142 3300005468 Bacteria 2336
34 Ga0070698_100075700 3300005471 Bacteria 3370
35 Ga0068853_100002429 3300005539 Bacteria 13931
36 Ga0068853_100400381 3300005539 Bacteria 1285
37 Ga0070665_100000041 3300005548 Bacteria 297849
38 Ga0068855_100048588 3300005563 Bacteria 5007
39 Ga0068855_100122594 3300005563 Bacteria 2974
40 Ga0068855_100968655 3300005563 Bacteria 895
41 Ga0068857_100060561 3300005577 Bacteria 3362
42 Ga0068856_100016780 3300005614 Bacteria 7096
43 Ga0068856_100132350 3300005614 Bacteria 2499
44 Ga0068852_100001148 3300005616 Bacteria 17515
45 Ga0068852_100375164 3300005616 Bacteria 1394
46 Ga0068860_100000491 3300005843 Bacteria 48922
47 Ga0068860_100018459 3300005843 Bacteria 6784
48 Ga0070717_10009629 3300006028 Bacteria 7272
49 Ga0075366_10007093 3300006195 Bacteria 6169
50 Ga0105240_10000242 3300009093 Bacteria 108001
51 Ga0105240_10001927 3300009093 Bacteria 34500
52 Ga0105240_10018443 3300009093 Bacteria 9369
53 Ga0105240_10102311 3300009093 Bacteria 3482
54 Ga0105240_10119092 3300009093 Bacteria 3181
55 Ga0105240_10127980 3300009093 Bacteria 3049
56 Ga0105240_10175965 3300009093 Bacteria 2530
57 Ga0105240_10212410 3300009093 Bacteria 2260
58 Ga0105240_10510066 3300009093 Bacteria 1336
59 Ga0105243_10000007 3300009148 Bacteria 445042
60 Ga0105241_10046906 3300009174 Unclassified 3283
61 Ga0105241_10448886 3300009174 Bacteria 1140
62 Ga0105237_10002292 3300009545 Bacteria 23786
63 Ga0105237_10003611 3300009545 Bacteria 18275
64 Ga0105237_10008573 3300009545 Bacteria 11058
65 Ga0105237_10014759 3300009545 Bacteria 8153
66 Ga0105237_10735422 3300009545 Bacteria 993
67 Ga0105238_10008309 3300009551 Bacteria 10381
68 Ga0105238_10042065 3300009551 Bacteria 4627
69 Ga0105238_10047415 3300009551 Bacteria 4332
70 Ga0105238_10071522 3300009551 Bacteria 3466
71 Ga0105249_10544990 3300009553 Bacteria 1210
72 Ga0105239_10000180 3300010375 Bacteria 91772
73 Ga0105239_10002087 3300010375 Bacteria 25905
74 Ga0105239_10019552 3300010375 Bacteria 7476
75 Ga0105239_10032390 3300010375 Bacteria 5745
76 Ga0105239_10064320 3300010375 Bacteria 4027
77 Ga0105239_10086378 3300010375 Bacteria 3457
78 Ga0105239_10542994 3300010375 Bacteria 1323
79 Ga0157373_10002368 3300013100 Bacteria 14315
80 Ga0157373_10013358 3300013100 Bacteria 6023
81 Ga0157371_10000707 3300013102 Bacteria 39149
82 Ga0157371_10010532 3300013102 Bacteria 7191
83 Ga0157370_10023399 3300013104 Bacteria 6133
84 Ga0157370_10084956 3300013104 Bacteria 2973
85 Ga0157370_10202495 3300013104 Unclassified 1841
86 Ga0163162_10001178 3300013306 Bacteria 24409
87 Ga0163162_10370774 3300013306 Bacteria 1565
88 Ga0163162_10374789 3300013306 Unclassified 1556
89 Ga0163162_10501743 3300013306 Unclassified 1344
90 Ga0157372_10025395 3300013307 Bacteria 6441
91 Ga0157372_10274748 3300013307 Unclassified 1958
92 Ga0157375_10237205 3300013308 Unclassified 1983
93 Ga0163163_10266643 3300014325 Bacteria 1764
94 Ga0182008_10000047 3300014497 Bacteria 108181
95 Ga0182008_10000462 3300014497 Bacteria 31030
96 Ga0182006_1000403 3300015261 Bacteria 35045
97 Ga0182006_1002070 3300015261 Bacteria 11228
98 Ga0182005_1000103 3300015265 Bacteria 64268
99 Ga0163161_10000593 3300017792 Bacteria 29004
100 Ga0163161_10011765 3300017792 Bacteria 6067
101 Ga0209436_110224 3300025208 Unclassified 1730
102 Ga0209437_100017 3300025233 Bacteria 694471
103 Ga0209258_100160 3300025242 Bacteria 154101
104 Ga0209646_1000009 3300025246 Bacteria 652154
105 Ga0209026_1000188 3300025250 Bacteria 90347
106 Ga0209148_1000153 3300025254 Bacteria 147028
107 Ga0209673_1000016 3300025273 Bacteria 506202
108 Ga0209673_1000111 3300025273 Bacteria 180094
109 Ga0209564_1001661 3300025295 Bacteria 21364
110 Ga0209758_1002513 3300025297 Bacteria 18609
111 Ga0209758_1008296 3300025297 Bacteria 6785
112 Ga0209758_1011100 3300025297 Bacteria 5268
113 Ga0209050_1002034 3300025298 Bacteria 18714
114 Ga0207426_1000564 3300025302 Bacteria 50590
115 Ga0207426_1005767 3300025302 Bacteria 5563
116 Ga0207426_1030908 3300025302 Bacteria 1752
117 Ga0209051_1046215 3300025303 Unclassified 1499
118 Ga0209257_1000004 3300025304 Bacteria 1678347
119 Ga0209257_1002577 3300025304 Bacteria 17636
120 Ga0207647_10137185 3300025904 Bacteria 1435
121 Ga0207654_10022284 3300025911 Unclassified 3378
122 Ga0207695_10000066 3300025913 Bacteria 334103
123 Ga0207695_10009865 3300025913 Bacteria 11734
124 Ga0207695_10017777 3300025913 Bacteria 8251
125 Ga0207695_10060678 3300025913 Bacteria 3913
126 Ga0207695_10081665 3300025913 Bacteria 3271
127 Ga0207695_10244695 3300025913 Bacteria 1694
128 Ga0207671_10006073 3300025914 Bacteria 10881
129 Ga0207671_10009054 3300025914 Bacteria 8370
130 Ga0207671_10009445 3300025914 Bacteria 8153
131 Ga0207671_10020785 3300025914 Bacteria 4993
132 Ga0207671_10209429 3300025914 Unclassified 1524
133 Ga0207646_10057828 3300025922 Bacteria 3465
134 Ga0207694_10070460 3300025924 Bacteria 2731
135 Ga0207709_10000033 3300025935 Bacteria 320483
136 Ga0207667_10001217 3300025949 Bacteria 32222
137 Ga0207667_10582727 3300025949 Bacteria 1129
138 Ga0207639_10014430 3300026041 Bacteria 5557
139 Ga0207639_10320745 3300026041 Bacteria 1376
140 Ga0207702_10281401 3300026078 Bacteria 1573
141 Ga0207674_10044840 3300026116 Bacteria 4554
142 Ga0207698_10004729 3300026142 Bacteria 8328
143 Ga0207698_10261358 3300026142 Bacteria 1590
144 Ga0268266_10000014 3300028379 Bacteria 644033
145 Ga0268264_10000674 3300028381 Bacteria 39908
146 Ga0268264_10013103 3300028381 Bacteria 6818
147 Ga0307517_10006315 3300028786 Bacteria 17589
148 Ga0307517_10278839 3300028786 Bacteria 955
149 Ga0307515_10000001 3300028794 Bacteria 4259510
150 Ga0307515_10004427 3300028794 Bacteria 29079
151 Ga0307515_10010320 3300028794 Bacteria 17912
152 Ga0307515_10133955 3300028794 Unclassified 2708
153 Ga0307511_10000264 3300030521 Bacteria 54303
154 Ga0265331_10026453 3300031250 Bacteria 2916
155 Ga0265327_10002089 3300031251 Bacteria 22248
156 Ga0265327_10054344 3300031251 Bacteria 2073
157 Ga0307513_10073130 3300031456 Bacteria 3570
158 Ga0307509_10039209 3300031507 Bacteria 5162
159 Ga0307509_10056277 3300031507 Bacteria 4175
160 Ga0307509_10359275 3300031507 Bacteria 1177
161 Ga0307509_10364576 3300031507 Bacteria 1163
162 Ga0307508_10315694 3300031616 Bacteria 1155
163 Ga0307516_10001386 3300031730 Bacteria 33456
164 Ga0307516_10110903 3300031730 Bacteria 2546
165 Ga0307412_10000001 3300031911 Bacteria 822691
166 Ga0307414_10001999 3300032004 Bacteria 10587
167 Ga0307414_10065567 3300032004 Bacteria 2591
168 Ga0307507_10000015 3300033179 Bacteria 237419
169 Ga0307510_10000497 3300033180 Bacteria 38862
170 Ga0307510_10002234 3300033180 Bacteria 21891
171 Ga0395900_0125568 3300037418 Bacteria 2632
172 Ga0395905_0257785 3300037471 Unclassified 1628
173 Ga0451576_0000455 3300045051 Bacteria 92690
174 Ga0495638_0130866 3300046460 Unclassified 1474
175 Ga0495638_0155569 3300046460 Bacteria 1323
176 Ga0495650_0000014 3300046471 Bacteria 581606
177 Ga0495606_0007647 3300046507 Bacteria 9591
178 Ga0495606_0052147 3300046507 Bacteria 2662
179 Ga0495610_0017609 3300046512 Bacteria 4067
180 Ga0495616_0001637 3300046513 Bacteria 15353
181 Ga0495616_0003951 3300046513 Bacteria 9442
182 Ga0495632_0233300 3300046519 Bacteria 829
183 Ga0495648_0015412 3300046524 Bacteria 5552
184 Ga0495652_0072224 3300046529 Bacteria 2877
185 Ga0495633_0000193 3300046558 Bacteria 77938
186 Ga0495633_0005632 3300046558 Bacteria 7595
187 Ga0495668_0000950 3300046616 Bacteria 32188
188 Ga0495668_0134570 3300046616 Bacteria 1353
189 Ga0495611_0000590 3300046648 Bacteria 20935
190 Ga0495625_0000009 3300046660 Bacteria 404954
191 Ga0495625_0003063 3300046660 Bacteria 17116
192 Ga0495625_0108341 3300046660 Unclassified 1901
193 Ga0495661_0053221 3300046665 Bacteria 2435
194 Ga0495671_0062261 3300046692 Bacteria 1839
195 Ga0495649_0000008 3300046694 Bacteria 483706
196 Ga0495683_0004226 3300047323 Bacteria 8203
197 Ga0495687_000144 3300047443 Bacteria 108217
198 Ga0495673_0043125 3300047469 Bacteria 2021
199 Ga0495686_0000004 3300047472 Bacteria 869019
200 Ga0495686_0090969 3300047472 Bacteria 1852
201 Ga0495686_0210539 3300047472 Unclassified 1111
202 Ga0496116_0015319 3300048919 Bacteria 6065
203 Ga0496117_0003071 3300048920 Bacteria 19993
204 Ga0496121_0000028 3300048924 Bacteria 439193
205 Ga0496122_0003701 3300048925 Bacteria 19795
206 Ga0496122_0005541 3300048925 Bacteria 14981
207 Ga0496123_0022386 3300048926 Bacteria 4871
208 Ga0501067_0076319 3300049583 Bacteria 1857
209 Ga0501073_0216808 3300049589 Bacteria 1322
210 Ga0501080_0045432 3300049742 Bacteria 4089
211 Ga0501083_0007935 3300049744 Bacteria 7516
212 Ga0501241_001701 3300049758 Bacteria 4384
213 nmdc:mga0k408_312_c3 3300050493 Bacteria 13663
214 Ga0500644_0000295 3300053088 Bacteria 26799
215 Ga0500583_0000026 3300053092 Bacteria 110083
216 Ga0500583_0024213 3300053092 Unclassified 2572
217 Ga0500651_0000373 3300053093 Bacteria 24533
218 Ga0500569_001847 3300053109 Bacteria 4075
219 Ga0500618_000150 3300053125 Bacteria 57266
220 Ga0500652_063466 3300053131 Unclassified 1524
221 Ga0500658_0001248 3300053134 Bacteria 10311
222 Ga0500577_0044560 3300053142 Bacteria 1635
223 Ga0500588_0006702 3300053146 Unclassified 2624
224 Ga0500616_0008524 3300053153 Bacteria 6356
225 Ga0500622_0003237 3300053156 Bacteria 11063
226 Ga0500622_0017132 3300053156 Bacteria 3860
227 Ga0500633_0005576 3300053160 Bacteria 3005
228 Ga0501082_0231521 3300060353 Bacteria 1608

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046519 Ga0495632_0233300 Ga0495632_0233300_132_764 209
2 iso_pu_bacteria 2883291878 2883295552 238
3 iso_pu_bacteria 2883354860 2883358408 238
4 3300049583 Ga0501067_0076319 Ga0501067_0076319_594_1331 240
5 3300049589 Ga0501073_0216808 Ga0501073_0216808_56_793 240
6 3300049742 Ga0501080_0045432 Ga0501080_0045432_2284_3021 240
7 3300049744 Ga0501083_0007935 Ga0501083_0007935_1237_1974 240
8 3300060353 Ga0501082_0231521 Ga0501082_0231521_414_1151 240
9 3300002738 JGI25154J39366_1000012 JGI25154J39366_1000012221 241
10 3300003322 rootL2_10056736 rootL2_100567366 241
11 3300003354 JGI25160J50197_1005023 JGI25160J50197_10050232 241
12 3300003771 Ga0055526_1007559 Ga0055526_10075596 241
13 3300003790 Ga0055528_1000120 Ga0055528_10001207 241
14 3300003791 Ga0055530_10012684 Ga0055530_100126842 241
15 3300003794 Ga0055531_10046730 Ga0055531_100467302 241
16 3300005262 Ga0065165_1000012 Ga0065165_1000012248 241
17 3300025246 Ga0209646_1000009 Ga0209646_100000953 241
18 3300025250 Ga0209026_1000188 Ga0209026_100018853 241
19 3300025273 Ga0209673_1000016 Ga0209673_1000016322 241
20 3300025273 Ga0209673_1000111 Ga0209673_1000111122 241
21 3300025295 Ga0209564_1001661 Ga0209564_10016614 241
22 3300025297 Ga0209758_1002513 Ga0209758_10025137 241
23 3300025298 Ga0209050_1002034 Ga0209050_10020348 241
24 3300025302 Ga0207426_1005767 Ga0207426_10057676 241
25 3300025303 Ga0209051_1046215 Ga0209051_10462152 241
26 3300025304 Ga0209257_1002577 Ga0209257_10025773 241
27 3300005468 Ga0070707_100142142 Ga0070707_1001421423 244
28 3300005471 Ga0070698_100075700 Ga0070698_1000757004 244
29 3300006028 Ga0070717_10009629 Ga0070717_100096294 244
30 3300025922 Ga0207646_10057828 Ga0207646_100578283 244
31 iso_pu_bacteria 2842722452 2842724855 250
32 iso_pu_bacteria 2842909656 2842913125 250
33 iso_pu_bacteria 2928078545 2928078818 250
34 iso_pu_bacteria 2929239360 2929242142 251
35 iso_pu_bacteria 2929921140 2929924259 251
36 iso_pu_bacteria 8003151029 8003156119 251
37 iso_pu_bacteria 2738541284 2738761677 252
38 iso_pu_bacteria 2738541302 2738853114 252
39 iso_pu_bacteria 2739367656 2739617677 252
40 iso_pu_bacteria 2775506987 2776615674 252
41 iso_pu_bacteria 2818991442 2819572287 252
42 iso_pu_bacteria 2821136567 2821140349 252
43 iso_pu_bacteria 2842903701 2842906168 252
44 iso_pu_bacteria 2852623160 2852623848 252
45 iso_pu_bacteria 2884933994 2884937249 252
46 iso_pu_bacteria 2904467357 2904473932 252
47 3300003320 rootH2_10273262 rootH2_102732621 253
48 3300005539 Ga0068853_100002429 Ga0068853_10000242911 253
49 3300009093 Ga0105240_10212410 Ga0105240_102124103 253
50 3300009551 Ga0105238_10071522 Ga0105238_100715222 253
51 3300010375 Ga0105239_10032390 Ga0105239_100323907 253
52 3300025913 Ga0207695_10081665 Ga0207695_100816652 253
53 3300026041 Ga0207639_10014430 Ga0207639_100144305 253
54 3300049758 Ga0501241_001701 Ga0501241_001701_3402_4172 253
55 3300005563 Ga0068855_100968655 Ga0068855_1009686551 254
56 3300013307 Ga0157372_10274748 Ga0157372_102747482 254
57 3300017792 Ga0163161_10000593 Ga0163161_1000059311 254
58 3300025949 Ga0207667_10582727 Ga0207667_105827271 254
59 3300028794 Ga0307515_10133955 Ga0307515_101339553 254
60 3300046471 Ga0495650_0000014 Ga0495650_0000014_482133_482897 254
61 3300046512 Ga0495610_0017609 Ga0495610_0017609_1508_2272 254
62 3300046513 Ga0495616_0003951 Ga0495616_0003951_7310_8074 254
63 3300046529 Ga0495652_0072224 Ga0495652_0072224_126_890 254
64 3300046558 Ga0495633_0005632 Ga0495633_0005632_2148_2912 254
65 3300046616 Ga0495668_0134570 Ga0495668_0134570_50_814 254
66 3300046660 Ga0495625_0000009 Ga0495625_0000009_144476_145240 254
67 3300046665 Ga0495661_0053221 Ga0495661_0053221_1618_2382 254
68 3300046692 Ga0495671_0062261 Ga0495671_0062261_364_1128 254
69 3300046694 Ga0495649_0000008 Ga0495649_0000008_103849_104613 254
70 3300047469 Ga0495673_0043125 Ga0495673_0043125_142_906 254
71 3300047472 Ga0495686_0090969 Ga0495686_0090969_501_1265 254
72 3300001979 JGI24740J21852_10008868 JGI24740J21852_100088682 255
73 3300002737 JGI25162J39368_1000121 JGI25162J39368_100012172 255
74 3300003215 JGI25153J46596_10005344 JGI25153J46596_100053442 255
75 3300003320 rootH2_10162856 rootH2_101628563 255
76 3300003322 rootL2_10178307 rootL2_101783074 255
77 3300003323 rootH1_10224846 rootH1_102248462 255
78 3300003323 rootH1_10374247 rootH1_103742472 255
79 3300003354 JGI25160J50197_1010759 JGI25160J50197_10107593 255
80 3300003761 Ga0055535_1002349 Ga0055535_10023493 255
81 3300003762 Ga0055542_1006479 Ga0055542_10064792 255
82 3300005262 Ga0065165_1039159 Ga0065165_10391592 255
83 3300006195 Ga0075366_10007093 Ga0075366_100070932 255
84 3300009093 Ga0105240_10000242 Ga0105240_1000024260 255
85 3300009093 Ga0105240_10119092 Ga0105240_101190924 255
86 3300009093 Ga0105240_10127980 Ga0105240_101279804 255
87 3300009093 Ga0105240_10175965 Ga0105240_101759653 255
88 3300009545 Ga0105237_10003611 Ga0105237_100036115 255
89 3300009545 Ga0105237_10014759 Ga0105237_100147592 255
90 3300009545 Ga0105237_10735422 Ga0105237_107354222 255
91 3300010375 Ga0105239_10000180 Ga0105239_100001802 255
92 3300010375 Ga0105239_10019552 Ga0105239_100195525 255
93 3300010375 Ga0105239_10064320 Ga0105239_100643203 255
94 3300013104 Ga0157370_10202495 Ga0157370_102024951 255
95 3300013306 Ga0163162_10370774 Ga0163162_103707742 255
96 3300013306 Ga0163162_10374789 Ga0163162_103747892 255
97 3300014325 Ga0163163_10266643 Ga0163163_102666432 255
98 3300017792 Ga0163161_10011765 Ga0163161_100117652 255
99 3300025233 Ga0209437_100017 Ga0209437_100017468 255
100 3300025242 Ga0209258_100160 Ga0209258_10016042 255
101 3300025254 Ga0209148_1000153 Ga0209148_100015384 255
102 3300025297 Ga0209758_1008296 Ga0209758_10082966 255
103 3300025297 Ga0209758_1011100 Ga0209758_10111005 255
104 3300025302 Ga0207426_1000564 Ga0207426_100056412 255
105 3300025302 Ga0207426_1030908 Ga0207426_10309082 255
106 3300025913 Ga0207695_10000066 Ga0207695_10000066214 255
107 3300025913 Ga0207695_10017777 Ga0207695_100177775 255
108 3300025914 Ga0207671_10009445 Ga0207671_100094452 255
109 3300025914 Ga0207671_10209429 Ga0207671_102094292 255
110 3300028794 Ga0307515_10004427 Ga0307515_1000442718 255
111 3300028794 Ga0307515_10010320 Ga0307515_100103207 255
112 3300031250 Ga0265331_10026453 Ga0265331_100264533 255
113 3300031251 Ga0265327_10002089 Ga0265327_1000208912 255
114 3300033179 Ga0307507_10000015 Ga0307507_10000015191 255
115 3300033180 Ga0307510_10000497 Ga0307510_1000049712 255
116 3300033180 Ga0307510_10002234 Ga0307510_1000223416 255
117 3300046507 Ga0495606_0007647 Ga0495606_0007647_312_1118 255
118 3300046507 Ga0495606_0052147 Ga0495606_0052147_999_1802 255
119 3300046513 Ga0495616_0001637 Ga0495616_0001637_7933_8730 255
120 3300046558 Ga0495633_0000193 Ga0495633_0000193_67571_68353 255
121 3300046616 Ga0495668_0000950 Ga0495668_0000950_26138_26908 255
122 3300046660 Ga0495625_0003063 Ga0495625_0003063_10281_11063 255
123 3300047323 Ga0495683_0004226 Ga0495683_0004226_1403_2170 255
124 3300050493 nmdc:mga0k408_312_c3 nmdc:mga0k408_312_c3_4501_5283 255
125 3300053088 Ga0500644_0000295 Ga0500644_0000295_16972_17742 255
126 3300053109 Ga0500569_001847 Ga0500569_001847_2283_3053 255
127 3300053125 Ga0500618_000150 Ga0500618_000150_12080_12892 255
128 3300053134 Ga0500658_0001248 Ga0500658_0001248_7438_8208 255
129 3300053142 Ga0500577_0044560 Ga0500577_0044560_141_911 255
130 3300053153 Ga0500616_0008524 Ga0500616_0008524_2211_2981 255
131 3300053160 Ga0500633_0005576 Ga0500633_0005576_602_1372 255
132 2162886007 SwRhRL2b_contig_320635 SwRhRL2b_0729.00007540 256
133 3300003322 rootL2_10027620 rootL2_100276204 256
134 3300003323 rootH1_10056351 rootH1_100563512 256
135 3300003794 Ga0055531_10000102 Ga0055531_1000010246 256
136 3300005262 Ga0065165_1068911 Ga0065165_10689111 256
137 3300005288 Ga0065714_10003685 Ga0065714_100036857 256
138 3300005288 Ga0065714_10005255 Ga0065714_100052551 256
139 3300005288 Ga0065714_10140859 Ga0065714_101408592 256
140 3300005289 Ga0065704_10000252 Ga0065704_100002522 256
141 3300005289 Ga0065704_10086798 Ga0065704_100867984 256
142 3300005289 Ga0065704_10093639 Ga0065704_100936393 256
143 3300005335 Ga0070666_10012864 Ga0070666_100128643 256
144 3300005539 Ga0068853_100400381 Ga0068853_1004003812 256
145 3300005548 Ga0070665_100000041 Ga0070665_100000041112 256
146 3300005563 Ga0068855_100048588 Ga0068855_1000485885 256
147 3300005563 Ga0068855_100122594 Ga0068855_1001225942 256
148 3300005577 Ga0068857_100060561 Ga0068857_1000605613 256
149 3300005614 Ga0068856_100016780 Ga0068856_1000167803 256
150 3300005614 Ga0068856_100132350 Ga0068856_1001323502 256
151 3300005616 Ga0068852_100001148 Ga0068852_1000011484 256
152 3300005616 Ga0068852_100375164 Ga0068852_1003751642 256
153 3300005843 Ga0068860_100000491 Ga0068860_10000049124 256
154 3300005843 Ga0068860_100018459 Ga0068860_1000184594 256
155 3300009093 Ga0105240_10001927 Ga0105240_1000192720 256
156 3300009093 Ga0105240_10018443 Ga0105240_100184438 256
157 3300009093 Ga0105240_10102311 Ga0105240_101023112 256
158 3300009093 Ga0105240_10510066 Ga0105240_105100662 256
159 3300009148 Ga0105243_10000007 Ga0105243_10000007141 256
160 3300009174 Ga0105241_10046906 Ga0105241_100469062 256
161 3300009174 Ga0105241_10448886 Ga0105241_104488862 256
162 3300009545 Ga0105237_10002292 Ga0105237_100022922 256
163 3300009545 Ga0105237_10008573 Ga0105237_100085733 256
164 3300009551 Ga0105238_10008309 Ga0105238_100083094 256
165 3300009551 Ga0105238_10042065 Ga0105238_100420651 256
166 3300009551 Ga0105238_10047415 Ga0105238_100474152 256
167 3300009553 Ga0105249_10544990 Ga0105249_105449901 256
168 3300010375 Ga0105239_10002087 Ga0105239_100020877 256
169 3300010375 Ga0105239_10086378 Ga0105239_100863782 256
170 3300010375 Ga0105239_10542994 Ga0105239_105429941 256
171 3300013100 Ga0157373_10002368 Ga0157373_100023683 256
172 3300013100 Ga0157373_10013358 Ga0157373_100133587 256
173 3300013102 Ga0157371_10000707 Ga0157371_100007071 256
174 3300013102 Ga0157371_10010532 Ga0157371_100105321 256
175 3300013104 Ga0157370_10023399 Ga0157370_100233997 256
176 3300013104 Ga0157370_10084956 Ga0157370_100849561 256
177 3300013306 Ga0163162_10001178 Ga0163162_1000117810 256
178 3300013306 Ga0163162_10501743 Ga0163162_105017432 256
179 3300013307 Ga0157372_10025395 Ga0157372_100253955 256
180 3300013308 Ga0157375_10237205 Ga0157375_102372052 256
181 3300014497 Ga0182008_10000047 Ga0182008_10000047100 256
182 3300014497 Ga0182008_10000462 Ga0182008_1000046223 256
183 3300015261 Ga0182006_1000403 Ga0182006_100040319 256
184 3300015261 Ga0182006_1002070 Ga0182006_10020709 256
185 3300015265 Ga0182005_1000103 Ga0182005_100010343 256
186 3300025208 Ga0209436_110224 Ga0209436_1102242 256
187 3300025304 Ga0209257_1000004 Ga0209257_10000041304 256
188 3300025904 Ga0207647_10137185 Ga0207647_101371852 256
189 3300025911 Ga0207654_10022284 Ga0207654_100222843 256
190 3300025913 Ga0207695_10009865 Ga0207695_100098657 256
191 3300025913 Ga0207695_10060678 Ga0207695_100606783 256
192 3300025913 Ga0207695_10244695 Ga0207695_102446952 256
193 3300025914 Ga0207671_10006073 Ga0207671_100060733 256
194 3300025914 Ga0207671_10009054 Ga0207671_100090542 256
195 3300025914 Ga0207671_10020785 Ga0207671_100207852 256
196 3300025924 Ga0207694_10070460 Ga0207694_100704603 256
197 3300025935 Ga0207709_10000033 Ga0207709_10000033241 256
198 3300025949 Ga0207667_10001217 Ga0207667_1000121720 256
199 3300026041 Ga0207639_10320745 Ga0207639_103207452 256
200 3300026078 Ga0207702_10281401 Ga0207702_102814013 256
201 3300026116 Ga0207674_10044840 Ga0207674_100448404 256
202 3300026142 Ga0207698_10004729 Ga0207698_100047293 256
203 3300026142 Ga0207698_10261358 Ga0207698_102613582 256
204 3300028379 Ga0268266_10000014 Ga0268266_1000001483 256
205 3300028381 Ga0268264_10000674 Ga0268264_1000067423 256
206 3300028381 Ga0268264_10013103 Ga0268264_100131034 256
207 3300028786 Ga0307517_10006315 Ga0307517_100063159 256
208 3300028786 Ga0307517_10278839 Ga0307517_102788392 256
209 3300028794 Ga0307515_10000001 Ga0307515_100000012911 256
210 3300030521 Ga0307511_10000264 Ga0307511_1000026410 256
211 3300031251 Ga0265327_10054344 Ga0265327_100543443 256
212 3300031456 Ga0307513_10073130 Ga0307513_100731301 256
213 3300031507 Ga0307509_10039209 Ga0307509_100392092 256
214 3300031507 Ga0307509_10056277 Ga0307509_100562773 256
215 3300031507 Ga0307509_10359275 Ga0307509_103592752 256
216 3300031507 Ga0307509_10364576 Ga0307509_103645761 256
217 3300031616 Ga0307508_10315694 Ga0307508_103156942 256
218 3300031730 Ga0307516_10001386 Ga0307516_1000138630 256
219 3300031730 Ga0307516_10110903 Ga0307516_101109032 256
220 3300031911 Ga0307412_10000001 Ga0307412_10000001683 256
221 3300032004 Ga0307414_10001999 Ga0307414_1000199911 256
222 3300032004 Ga0307414_10065567 Ga0307414_100655672 256
223 3300037418 Ga0395900_0125568 Ga0395900_0125568_510_1313 256
224 3300037471 Ga0395905_0257785 Ga0395905_0257785_725_1528 256
225 3300045051 Ga0451576_0000455 Ga0451576_0000455_26456_27229 256
226 3300046460 Ga0495638_0130866 Ga0495638_0130866_286_1086 256
227 3300046460 Ga0495638_0155569 Ga0495638_0155569_118_921 256
228 3300046524 Ga0495648_0015412 Ga0495648_0015412_3493_4296 256
229 3300046648 Ga0495611_0000590 Ga0495611_0000590_8382_9194 256
230 3300046660 Ga0495625_0108341 Ga0495625_0108341_88_891 256
231 3300047443 Ga0495687_000144 Ga0495687_000144_88245_89048 256
232 3300047472 Ga0495686_0000004 Ga0495686_0000004_693684_694475 256
233 3300047472 Ga0495686_0210539 Ga0495686_0210539_224_1033 256
234 3300048919 Ga0496116_0015319 Ga0496116_0015319_1096_1902 256
235 3300048920 Ga0496117_0003071 Ga0496117_0003071_6518_7324 256
236 3300048924 Ga0496121_0000028 Ga0496121_0000028_407684_408463 256
237 3300048925 Ga0496122_0003701 Ga0496122_0003701_782_1585 256
238 3300048925 Ga0496122_0005541 Ga0496122_0005541_2993_3799 256
239 3300048926 Ga0496123_0022386 Ga0496123_0022386_930_1733 256
240 3300053092 Ga0500583_0000026 Ga0500583_0000026_18951_19772 256
241 3300053092 Ga0500583_0024213 Ga0500583_0024213_897_1700 256
242 3300053093 Ga0500651_0000373 Ga0500651_0000373_16544_17314 256
243 3300053131 Ga0500652_063466 Ga0500652_063466_23_844 256
244 3300053146 Ga0500588_0006702 Ga0500588_0006702_1621_2439 256
245 3300053156 Ga0500622_0003237 Ga0500622_0003237_10126_10929 256
246 3300053156 Ga0500622_0017132 Ga0500622_0017132_2590_3369 256
247 iso_pu_bacteria 2721755487 2722728384 256
248 iso_pu_bacteria 2738541283 2738754893 256

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

31

222

0.94

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

37

273

0.91

PF08659

KR

KR domain

32

196

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bmn-assembly1.cif.gz_B apo structure of short-chain alcohol dehydrogenase from ralstonia sp. dsm 6428 0.9719 1 248
1yde-assembly3.cif.gz_K crystal structure of human retinal short-chain dehydrogenase/reductase 3 0.9718 1 252
1yde-assembly3.cif.gz_K crystal structure of human retinal short-chain dehydrogenase/reductase 3 0.968 1 252
4i5d-assembly1.cif.gz_A crystal structure of ralstonia sp. alcohol dehydrogenase in its apo form 0.9679 1 248
4i5f-assembly1.cif.gz_A crystal structure of ralstonia sp. alcohol dehydrogenase mutant n15g, g37d, r38v, r39s 0.9668 1 249
ID Description Score Start End Superfamily
af_Q6PKH6_18_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9733 4 183 3.40.50.720
5icsA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9703 4 252 3.40.50.720
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.964 2 79 3.40.50.720
2d1yC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.963 3 250 3.40.50.720
3ucxA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9613 3 248 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4V3GKT6-F1-model_v4 NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) 0.9782 4 253 GO:0016491
AF-A0A2D5ZA73-F1-model_v4 Short-chain dehydrogenase 0.9758 1 252 GO:0016491
AF-A0A2V8QV04-F1-model_v4 Oxidoreductase 0.975 3 179 GO:0004303
GO:0005829
GO:0006706
AF-A0A2N2PXS5-F1-model_v4 Short-chain dehydrogenase 0.9736 3 252 GO:0016491
AF-A0A7W4TRD1-F1-model_v4 NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) 0.9722 6 250 GO:0016491

Feature Viewer

pLDDT pTM Quality
94.99 0.92 High
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Predicted Structure (AlphaFold2)

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