F359874

General Info

Members Datasets Scaffolds Average Seq Length
248 155 232 459

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10053724|Ga0157370_100537243
Length 521
Sequence LRAELNRRPNRPDRTGTPFPGRTIPPDRTIAHAHTAHAGRPDNSTRRITMALRLLKITLVSLFVLLLAAVIWTGSIGKNLFRTATGSVSRSLCTSAFLARLDPQQTFTEEQLPLMRGIGWAIHYEVDRSRREVRSSVLGGFAARAVYREGLGCLLMQGDGAVPEAAGFQPDPIASTWPADMVEPADPAIRRALDRAFAEPDPAHPRLTKAVVVLHDGQLIAERYAPGYGPDTPIWAHSISKSITSALIGILVRQGKLQLEQPAPIAAWRSPADEHHAITVDQLLRMDSGLPFDETDGALNAMTRMLYLEHDMAGYAAKTPLVHPPGTAWGYSNLGYVLLSRLVRDAAGGSAVDVERLARRELFAPLGMRNTVIETDTTGTPVGASNVYASARDLARFGQLYLDDGVVDGRRLLPAGWVDYSRSQTLDTGYGAGFWTNLVNKGHVPVWNAPWGMPQLPKDMYYARGAFGQYVVIVPSEHLVVVRMGISLYYGDDTGDLVAAVIANLHRQAAPAPPDDAAILR

Samples

Sample ID Description Type Environment
1 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
2 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
3 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
4 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
5 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
6 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
7 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
8 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
9 2919404418 Luteibacter sp. 3190 Isolate Unclassified
10 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
11 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
12 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
13 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
14 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
15 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
16 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
17 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
18 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
19 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
20 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
21 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
22 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
23 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
24 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
25 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
26 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
27 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
28 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
29 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
30 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
31 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
32 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
33 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
56 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
57 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
61 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
63 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
65 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
92 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
93 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
94 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
95 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
96 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
97 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
98 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
99 3300044663 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA2E_TR Metagenome Unclassified
100 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
101 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
102 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
103 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
104 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
111 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
112 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
113 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
114 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
115 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
118 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
119 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
120 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
121 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
122 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
123 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
124 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
125 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
126 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
127 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
128 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
131 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
137 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
148 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
149 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
150 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
151 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
152 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
153 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
154 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
155 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.94
Metatranscriptomes 1.61
Isolates 6.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.34
Nodule 3.23
Rhizoplane 1.21
Rhizosphere 66.53
Stem 0
Stem Tuber 0
Unclassified 11.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10007871 3300001979 Bacteria 4299
2 JGI24739J22299_10000022 3300001989 Bacteria 45280
3 JGI24737J22298_10000260 3300001990 Bacteria 17513
4 JGI25156J39149_1002094 3300002705 Bacteria 7553
5 JGI25156J39149_1002338 3300002705 Bacteria 6909
6 JGI25162J39368_1001101 3300002737 Bacteria 16398
7 JGI25154J39366_1004712 3300002738 Bacteria 2356
8 JGI25157J39369_1000567 3300002741 Bacteria 22090
9 JGI25157J39369_1001668 3300002741 Bacteria 7553
10 JGI25164J39214_1000163 3300002772 Bacteria 63006
11 JGI25165J46597_1000326 3300003214 Bacteria 57016
12 Ga0006562J51391_1080725 3300003578 Bacteria 4050
13 Ga0006562J51391_1080727 3300003578 Bacteria 3100
14 Ga0006562J51391_1125941 3300003578 Bacteria 2052
15 Ga0055527_1000119 3300003760 Bacteria 56771
16 Ga0055535_1000147 3300003761 Bacteria 74557
17 Ga0055535_1000904 3300003761 Bacteria 20158
18 Ga0055542_1000057 3300003762 Bacteria 162955
19 Ga0055542_1000064 3300003762 Bacteria 159853
20 Ga0055542_1000101 3300003762 Bacteria 116277
21 Ga0055529_1000072 3300003763 Bacteria 159853
22 Ga0055529_1000105 3300003763 Bacteria 123670
23 Ga0065165_1000001 3300005262 Bacteria 494087
24 Ga0065165_1002406 3300005262 Bacteria 15970
25 Ga0070680_100054349 3300005336 Bacteria 3270
26 Ga0070682_100009987 3300005337 Bacteria 5376
27 Ga0070682_100034682 3300005337 Bacteria 3075
28 Ga0070661_100003860 3300005344 Bacteria 10314
29 Ga0070659_100007618 3300005366 Bacteria 7869
30 Ga0070714_100000650 3300005435 Bacteria 24670
31 Ga0070714_100013440 3300005435 Bacteria 6560
32 Ga0070714_100029381 3300005435 Bacteria 4570
33 Ga0070713_100002503 3300005436 Bacteria 12005
34 Ga0070662_100004147 3300005457 Bacteria 9119
35 Ga0070685_10008623 3300005466 Bacteria 5246
36 Ga0070707_100020476 3300005468 Bacteria 6240
37 Ga0070698_100025240 3300005471 Bacteria 6192
38 Ga0070684_100014175 3300005535 Bacteria 6448
39 Ga0070696_100065167 3300005546 Bacteria 2554
40 Ga0068855_100003571 3300005563 Bacteria 19022
41 Ga0068855_100007217 3300005563 Bacteria 13484
42 Ga0068855_100100042 3300005563 Bacteria 3339
43 Ga0068857_100000491 3300005577 Bacteria 28321
44 Ga0068857_100090305 3300005577 Bacteria 2741
45 Ga0068854_100000046 3300005578 Bacteria 91434
46 Ga0068854_100001951 3300005578 Bacteria 12595
47 Ga0068856_100002209 3300005614 Bacteria 20174
48 Ga0068851_10000867 3300005834 Bacteria 13033
49 Ga0075436_100073666 3300006914 Bacteria 2364
50 Ga0075435_100054402 3300007076 Bacteria 3230
51 Ga0105240_10006617 3300009093 Bacteria 17012
52 Ga0105240_10029366 3300009093 Bacteria 7164
53 Ga0105240_10191020 3300009093 Bacteria 2408
54 Ga0105247_10064249 3300009101 Bacteria 2280
55 Ga0105237_10000016 3300009545 Bacteria 256506
56 Ga0105237_10015638 3300009545 Bacteria 7888
57 Ga0105237_10167205 3300009545 Bacteria 2198
58 Ga0105237_10186810 3300009545 Bacteria 2072
59 Ga0105238_10061853 3300009551 Bacteria 3746
60 Ga0105239_10024159 3300010375 Bacteria 6694
61 Ga0157373_10029342 3300013100 Bacteria 3962
62 Ga0157370_10053724 3300013104 Bacteria 3841
63 Ga0157370_10107432 3300013104 Bacteria 2610
64 Ga0157372_10004340 3300013307 Bacteria 15147
65 Ga0157372_10095224 3300013307 Bacteria 3392
66 Ga0182006_1000005 3300015261 Bacteria 621201
67 Ga0182007_10002573 3300015262 Bacteria 8929
68 Ga0182007_10007401 3300015262 Bacteria 4607
69 Ga0209674_100111 3300025226 Bacteria 143058
70 Ga0209674_101630 3300025226 Bacteria 5620
71 Ga0209674_101669 3300025226 Bacteria 5524
72 Ga0209672_100008 3300025228 Bacteria 946876
73 Ga0209672_100113 3300025228 Bacteria 92025
74 Ga0209672_100269 3300025228 Bacteria 38347
75 Ga0207427_100075 3300025231 Bacteria 150143
76 Ga0209437_100319 3300025233 Bacteria 63021
77 Ga0209437_101006 3300025233 Bacteria 9793
78 Ga0209258_100004 3300025242 Bacteria 1376422
79 Ga0209258_100008 3300025242 Bacteria 1009355
80 Ga0209258_100144 3300025242 Bacteria 163814
81 Ga0209258_100198 3300025242 Bacteria 124013
82 Ga0209026_1000289 3300025250 Bacteria 56985
83 Ga0209026_1000405 3300025250 Bacteria 38212
84 Ga0209026_1002195 3300025250 Bacteria 7553
85 Ga0209026_1003894 3300025250 Bacteria 4697
86 Ga0209148_1000024 3300025254 Bacteria 669890
87 Ga0209148_1000041 3300025254 Bacteria 469323
88 Ga0209148_1000141 3300025254 Bacteria 163821
89 Ga0209148_1000170 3300025254 Bacteria 132641
90 Ga0209148_1003786 3300025254 Bacteria 3969
91 Ga0209759_1000164 3300025256 Bacteria 113141
92 Ga0209759_1000968 3300025256 Bacteria 20140
93 Ga0209759_1004047 3300025256 Bacteria 5610
94 Ga0209759_1006468 3300025256 Bacteria 3931
95 Ga0209129_1000720 3300025258 Bacteria 21371
96 Ga0209129_1000793 3300025258 Bacteria 19956
97 Ga0209233_1000210 3300025261 Bacteria 112384
98 Ga0209455_1000007 3300025272 Bacteria 1157983
99 Ga0209455_1000025 3300025272 Bacteria 670673
100 Ga0209455_1000338 3300025272 Bacteria 44594
101 Ga0209455_1013459 3300025272 Bacteria 1897
102 Ga0209758_1000290 3300025297 Bacteria 98878
103 Ga0209758_1022053 3300025297 Bacteria 2940
104 Ga0207656_10002711 3300025321 Bacteria 6009
105 Ga0207647_10006945 3300025904 Bacteria 8204
106 Ga0207647_10010039 3300025904 Bacteria 6699
107 Ga0207705_10008424 3300025909 Bacteria 7529
108 Ga0207707_10065653 3300025912 Bacteria 3161
109 Ga0207695_10000307 3300025913 Bacteria 118870
110 Ga0207695_10003762 3300025913 Bacteria 21057
111 Ga0207695_10011801 3300025913 Bacteria 10542
112 Ga0207671_10000013 3300025914 Bacteria 478458
113 Ga0207671_10001911 3300025914 Bacteria 23120
114 Ga0207657_10046282 3300025919 Bacteria 3812
115 Ga0207649_10064606 3300025920 Bacteria 2314
116 Ga0207700_10000795 3300025928 Bacteria 18225
117 Ga0207664_10000239 3300025929 Bacteria 41739
118 Ga0207664_10004850 3300025929 Bacteria 9147
119 Ga0207690_10000448 3300025932 Bacteria 26681
120 Ga0207690_10000586 3300025932 Bacteria 23543
121 Ga0207706_10025381 3300025933 Bacteria 5310
122 Ga0207661_10011600 3300025944 Bacteria 6392
123 Ga0207679_10155292 3300025945 Bacteria 1868
124 Ga0207667_10000040 3300025949 Bacteria 275827
125 Ga0207667_10000047 3300025949 Bacteria 240471
126 Ga0207667_10062904 3300025949 Bacteria 3879
127 Ga0207640_10000009 3300025981 Bacteria 283101
128 Ga0207702_10000438 3300026078 Bacteria 47495
129 Ga0207702_10001816 3300026078 Bacteria 21006
130 Ga0207702_10162690 3300026078 Bacteria 2039
131 Ga0207674_10000012 3300026116 Bacteria 193220
132 Ga0207674_10065375 3300026116 Bacteria 3666
133 Ga0395899_0000057 3300037312 Bacteria 214710
134 Ga0395899_0003016 3300037312 Bacteria 13442
135 Ga0395900_0000035 3300037418 Bacteria 254301
136 Ga0395900_0001866 3300037418 Bacteria 23992
137 Ga0395898_0000150 3300037466 Bacteria 181023
138 Ga0395898_0001301 3300037466 Bacteria 36458
139 Ga0395898_0005801 3300037466 Bacteria 13281
140 Ga0395898_0009868 3300037466 Bacteria 10010
141 Ga0395901_0025292 3300038443 Bacteria 6094
142 Ga0395901_0126631 3300038443 Bacteria 2684
143 Ga0439436_0000001 3300041404 Bacteria 299341
144 Ga0439465_0006780 3300041413 Bacteria 3638
145 Ga0451795_0984472 3300041456 Bacteria 2117
146 Ga0439437_001522 3300042000 Bacteria 2438
147 Ga0439449_0030846 3300042007 Bacteria 1998
148 Ga0450908_000182 3300042184 Bacteria 12859
149 Ga0466969_0004372 3300044656 Bacteria 7519
150 Ga0466972_0001412 3300044658 Bacteria 11640
151 Ga0466989_0041943 3300044663 Bacteria 2780
152 Ga0466982_0000008 3300044672 Bacteria 240089
153 Ga0466966_0010862 3300044684 Bacteria 6048
154 Ga0466966_0016761 3300044684 Bacteria 4840
155 Ga0466966_0039266 3300044684 Bacteria 3049
156 Ga0466961_0001836 3300044693 Bacteria 13184
157 Ga0466961_0005373 3300044693 Bacteria 8061
158 Ga0466961_0015886 3300044693 Bacteria 4831
159 Ga0466961_0059763 3300044693 Bacteria 2423
160 Ga0466964_0000829 3300044706 Bacteria 10115
161 Ga0466964_0050125 3300044706 Bacteria 1711
162 Ga0466971_0006033 3300044719 Bacteria 5274
163 Ga0466971_0022989 3300044719 Bacteria 2779
164 Ga0466971_0072622 3300044719 Bacteria 1563
165 Ga0466970_0005493 3300044765 Bacteria 6292
166 Ga0466970_0012524 3300044765 Bacteria 4339
167 Ga0466970_0043210 3300044765 Bacteria 2398
168 Ga0466957_0061777 3300044842 Bacteria 2300
169 Ga0466959_0014457 3300045049 Bacteria 5735
170 Ga0466959_0065953 3300045049 Bacteria 2626
171 Ga0466958_0007626 3300045836 Bacteria 5961
172 Ga0466958_0019336 3300045836 Bacteria 3965
173 Ga0466958_0027461 3300045836 Bacteria 3369
174 Ga0466958_0107879 3300045836 Bacteria 1737
175 Ga0466967_0031559 3300045976 Bacteria 4461
176 Ga0466967_0096721 3300045976 Bacteria 2694
177 Ga0495617_000016 3300046452 Bacteria 253600
178 Ga0495650_0060361 3300046471 Bacteria 1523
179 Ga0495584_0004400 3300046491 Bacteria 7587
180 Ga0495585_0036691 3300046492 Bacteria 2762
181 Ga0495607_0000010 3300046501 Bacteria 206525
182 Ga0495607_0001982 3300046501 Bacteria 17242
183 Ga0495583_0007900 3300046506 Bacteria 6597
184 Ga0495606_0000091 3300046507 Bacteria 153354
185 Ga0495606_0000150 3300046507 Bacteria 119726
186 Ga0495610_0000951 3300046512 Bacteria 26825
187 Ga0495616_0000001 3300046513 Bacteria 780061
188 Ga0495616_0009886 3300046513 Bacteria 5547
189 Ga0495620_0000131 3300046515 Bacteria 60856
190 Ga0495632_0026972 3300046519 Bacteria 3015
191 Ga0495609_0002626 3300046538 Bacteria 10916
192 Ga0495668_0005774 3300046616 Bacteria 8274
193 Ga0495625_0007493 3300046660 Bacteria 9486
194 Ga0495670_0010082 3300046691 Bacteria 4645
195 Ga0495670_0010728 3300046691 Bacteria 4502
196 Ga0495589_0000016 3300046794 Bacteria 209027
197 Ga0495660_0000116 3300046810 Bacteria 85798
198 Ga0495683_0001193 3300047323 Bacteria 17728
199 Ga0495673_0001814 3300047469 Bacteria 16138
200 Ga0495686_0000115 3300047472 Bacteria 166876
201 Ga0495686_0017245 3300047472 Bacteria 4869
202 Ga0496100_0001099 3300048903 Bacteria 13076
203 Ga0496101_0007760 3300048904 Bacteria 6973
204 Ga0496118_0004440 3300048921 Bacteria 16648
205 Ga0496121_0000905 3300048924 Bacteria 53422
206 Ga0496121_0009337 3300048924 Bacteria 11302
207 Ga0496121_0027783 3300048924 Bacteria 5285
208 Ga0496125_0000044 3300048928 Bacteria 296762
209 Ga0496126_0008072 3300048929 Bacteria 11404
210 Ga0495678_000475 3300049459 Bacteria 39998
211 Ga0501031_0072719 3300049568 Bacteria 2238
212 Ga0501033_0010579 3300049570 Bacteria 7073
213 Ga0501033_0037129 3300049570 Bacteria 3647
214 Ga0501033_0113482 3300049570 Bacteria 1970
215 Ga0501036_0263723 3300049572 Bacteria 1443
216 Ga0501037_0102847 3300049573 Bacteria 2060
217 Ga0501043_0050036 3300049579 Bacteria 3285
218 Ga0501047_0010880 3300049581 Bacteria 8602
219 Ga0501047_0058239 3300049581 Bacteria 3732
220 Ga0501047_0122994 3300049581 Bacteria 2476
221 Ga0501048_0020421 3300049582 Bacteria 4854
222 Ga0501070_0192870 3300049586 Bacteria 1674
223 Ga0501035_0026549 3300049822 Bacteria 5297
224 Ga0501035_0063333 3300049822 Bacteria 3289
225 Ga0501044_0012365 3300049823 Bacteria 9239
226 Ga0501044_0069727 3300049823 Bacteria 3578
227 Ga0501044_0070741 3300049823 Bacteria 3548
228 nmdc:mga07m45_37980_c1 3300050496 Bacteria 2686
229 Ga0500643_000002 3300053087 Bacteria 1277657
230 Ga0500555_000288 3300053103 Bacteria 21733
231 Ga0587067_003942 3300059640 Bacteria 1894
232 Ga0466962_0002663 3300061719 Bacteria 8492

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 8016595262 8016595906 367
2 iso_pu_bacteria 8016548790 8016549465 384
3 iso_pu_bacteria 8019530166 8019530819 398
4 3300048903 Ga0496100_0001099 Ga0496100_0001099_11601_12977 414
5 3300048904 Ga0496101_0007760 Ga0496101_0007760_5391_6767 414
6 3300049572 Ga0501036_0263723 Ga0501036_0263723_98_1417 418
7 3300048924 Ga0496121_0027783 Ga0496121_0027783_2674_4104 420
8 3300048929 Ga0496126_0008072 Ga0496126_0008072_641_2071 420
9 3300005471 Ga0070698_100025240 Ga0070698_1000252404 421
10 3300037466 Ga0395898_0009868 Ga0395898_0009868_6072_7460 426
11 3300038443 Ga0395901_0126631 Ga0395901_0126631_756_2144 426
12 3300013307 Ga0157372_10095224 Ga0157372_100952242 427
13 3300005468 Ga0070707_100020476 Ga0070707_1000204761 430
14 3300044693 Ga0466961_0015886 Ga0466961_0015886_3262_4656 430
15 3300045836 Ga0466958_0019336 Ga0466958_0019336_2551_3945 430
16 3300049570 Ga0501033_0113482 Ga0501033_0113482_15_1403 432
17 3300044719 Ga0466971_0072622 Ga0466971_0072622_116_1453 435
18 3300006914 Ga0075436_100073666 Ga0075436_1000736662 436
19 3300049570 Ga0501033_0037129 Ga0501033_0037129_546_1934 436
20 3300049582 Ga0501048_0020421 Ga0501048_0020421_1765_3153 436
21 3300037418 Ga0395900_0001866 Ga0395900_0001866_7624_9027 437
22 3300037466 Ga0395898_0005801 Ga0395898_0005801_1951_3354 437
23 3300038443 Ga0395901_0025292 Ga0395901_0025292_4602_6005 437
24 3300046515 Ga0495620_0000131 Ga0495620_0000131_59486_60838 437
25 3300050496 nmdc:mga07m45_37980_c1 nmdc:mga07m45_37980_c1_755_2143 437
26 3300049581 Ga0501047_0058239 Ga0501047_0058239_147_1562 438
27 3300009101 Ga0105247_10064249 Ga0105247_100642491 439
28 3300046538 Ga0495609_0002626 Ga0495609_0002626_5255_6643 439
29 3300005535 Ga0070684_100014175 Ga0070684_1000141753 440
30 3300005577 Ga0068857_100090305 Ga0068857_1000903052 440
31 3300013307 Ga0157372_10004340 Ga0157372_100043404 440
32 3300015262 Ga0182007_10002573 Ga0182007_1000257310 440
33 3300025944 Ga0207661_10011600 Ga0207661_100116004 440
34 3300026078 Ga0207702_10000438 Ga0207702_1000043810 440
35 3300026116 Ga0207674_10065375 Ga0207674_100653753 440
36 3300046616 Ga0495668_0005774 Ga0495668_0005774_2158_3537 440
37 3300048921 Ga0496118_0004440 Ga0496118_0004440_11300_12658 440
38 3300015261 Ga0182006_1000005 Ga0182006_1000005189 441
39 3300025913 Ga0207695_10011801 Ga0207695_100118017 441
40 3300046507 Ga0495606_0000091 Ga0495606_0000091_30601_31974 441
41 3300048924 Ga0496121_0009337 Ga0496121_0009337_8177_9562 441
42 3300049581 Ga0501047_0122994 Ga0501047_0122994_109_1515 441
43 3300009545 Ga0105237_10186810 Ga0105237_101868102 442
44 iso_pu_bacteria 2718218334 2721027179 444
45 3300041413 Ga0439465_0006780 Ga0439465_0006780_2004_3377 445
46 3300044693 Ga0466961_0005373 Ga0466961_0005373_1038_2393 445
47 3300044842 Ga0466957_0061777 Ga0466957_0061777_33_1388 445
48 3300045049 Ga0466959_0065953 Ga0466959_0065953_1194_2549 445
49 3300045836 Ga0466958_0007626 Ga0466958_0007626_1384_2739 445
50 3300044672 Ga0466982_0000008 Ga0466982_0000008_107287_108663 446
51 3300044684 Ga0466966_0039266 Ga0466966_0039266_137_1513 446
52 3300044706 Ga0466964_0000829 Ga0466964_0000829_6312_7688 446
53 3300044719 Ga0466971_0006033 Ga0466971_0006033_2829_4205 446
54 3300045836 Ga0466958_0107879 Ga0466958_0107879_149_1525 446
55 3300061719 Ga0466962_0002663 Ga0466962_0002663_6953_8329 446
56 iso_pu_bacteria 8016557553 8016557888 446
57 3300049822 Ga0501035_0026549 Ga0501035_0026549_1970_3358 447
58 iso_pu_bacteria 2513237094 2513639728 447
59 iso_pu_bacteria 2513237139 2513873731 447
60 iso_pu_bacteria 2617270735 2617350909 447
61 iso_pu_bacteria 3005718088 3005718105 447
62 3300002705 JGI25156J39149_1002338 JGI25156J39149_10023382 448
63 3300002741 JGI25157J39369_1000567 JGI25157J39369_100056719 448
64 3300003760 Ga0055527_1000119 Ga0055527_100011935 448
65 3300003761 Ga0055535_1000147 Ga0055535_100014755 448
66 3300003762 Ga0055542_1000064 Ga0055542_100006457 448
67 3300003763 Ga0055529_1000072 Ga0055529_100007283 448
68 3300005262 Ga0065165_1002406 Ga0065165_100240614 448
69 3300005614 Ga0068856_100002209 Ga0068856_10000220910 448
70 3300025226 Ga0209674_100111 Ga0209674_100111103 448
71 3300025228 Ga0209672_100008 Ga0209672_100008192 448
72 3300025242 Ga0209258_100004 Ga0209258_100004998 448
73 3300025242 Ga0209258_100008 Ga0209258_100008623 448
74 3300025250 Ga0209026_1000289 Ga0209026_100028936 448
75 3300025254 Ga0209148_1000041 Ga0209148_1000041125 448
76 3300025256 Ga0209759_1000164 Ga0209759_100016475 448
77 3300025272 Ga0209455_1000007 Ga0209455_1000007743 448
78 3300026078 Ga0207702_10001816 Ga0207702_1000181612 448
79 3300037312 Ga0395899_0000057 Ga0395899_0000057_79654_81036 448
80 3300037418 Ga0395900_0000035 Ga0395900_0000035_95682_97064 448
81 3300037466 Ga0395898_0000150 Ga0395898_0000150_155225_156607 448
82 3300044656 Ga0466969_0004372 Ga0466969_0004372_2785_4167 448
83 3300044663 Ga0466989_0041943 Ga0466989_0041943_831_2207 448
84 3300044684 Ga0466966_0010862 Ga0466966_0010862_3969_5351 448
85 3300044684 Ga0466966_0016761 Ga0466966_0016761_2528_3904 448
86 3300044693 Ga0466961_0001836 Ga0466961_0001836_1627_3009 448
87 3300044693 Ga0466961_0059763 Ga0466961_0059763_193_1575 448
88 3300044706 Ga0466964_0050125 Ga0466964_0050125_68_1450 448
89 3300044719 Ga0466971_0022989 Ga0466971_0022989_107_1489 448
90 3300044765 Ga0466970_0005493 Ga0466970_0005493_1348_2730 448
91 3300044765 Ga0466970_0012524 Ga0466970_0012524_1106_2488 448
92 3300044765 Ga0466970_0043210 Ga0466970_0043210_724_2100 448
93 3300045049 Ga0466959_0014457 Ga0466959_0014457_3505_4887 448
94 3300045836 Ga0466958_0027461 Ga0466958_0027461_998_2380 448
95 3300046452 Ga0495617_000016 Ga0495617_000016_185531_186925 448
96 3300046660 Ga0495625_0007493 Ga0495625_0007493_3430_4824 448
97 3300047472 Ga0495686_0017245 Ga0495686_0017245_1392_2786 448
98 3300002705 JGI25156J39149_1002094 JGI25156J39149_10020943 449
99 3300002737 JGI25162J39368_1001101 JGI25162J39368_10011018 449
100 3300002738 JGI25154J39366_1004712 JGI25154J39366_10047122 449
101 3300002741 JGI25157J39369_1001668 JGI25157J39369_10016683 449
102 3300002772 JGI25164J39214_1000163 JGI25164J39214_100016321 449
103 3300003214 JGI25165J46597_1000326 JGI25165J46597_100032620 449
104 3300003761 Ga0055535_1000904 Ga0055535_10009045 449
105 3300003762 Ga0055542_1000057 Ga0055542_1000057130 449
106 3300003762 Ga0055542_1000101 Ga0055542_100010113 449
107 3300003763 Ga0055529_1000105 Ga0055529_100010519 449
108 3300005336 Ga0070680_100054349 Ga0070680_1000543492 449
109 3300007076 Ga0075435_100054402 Ga0075435_1000544023 449
110 3300025228 Ga0209672_100113 Ga0209672_10011323 449
111 3300025228 Ga0209672_100269 Ga0209672_1002698 449
112 3300025231 Ga0207427_100075 Ga0207427_10007521 449
113 3300025233 Ga0209437_100319 Ga0209437_10031924 449
114 3300025242 Ga0209258_100144 Ga0209258_10014410 449
115 3300025242 Ga0209258_100198 Ga0209258_10019866 449
116 3300025250 Ga0209026_1002195 Ga0209026_10021954 449
117 3300025254 Ga0209148_1000024 Ga0209148_1000024215 449
118 3300025254 Ga0209148_1000141 Ga0209148_1000141127 449
119 3300025256 Ga0209759_1000968 Ga0209759_100096810 449
120 3300025261 Ga0209233_1000210 Ga0209233_100021022 449
121 3300025272 Ga0209455_1000025 Ga0209455_1000025215 449
122 3300025272 Ga0209455_1013459 Ga0209455_10134592 449
123 3300037312 Ga0395899_0003016 Ga0395899_0003016_11357_12751 449
124 3300037466 Ga0395898_0001301 Ga0395898_0001301_1458_2852 449
125 3300045976 Ga0466967_0031559 Ga0466967_0031559_1640_3034 449
126 iso_pu_bacteria 2895395659 2895396933 449
127 iso_pu_bacteria 2939611941 2939614263 449
128 3300025254 Ga0209148_1000170 Ga0209148_100017031 450
129 3300042007 Ga0439449_0030846 Ga0439449_0030846_429_1895 450
130 3300044658 Ga0466972_0001412 Ga0466972_0001412_10161_11582 450
131 3300059640 Ga0587067_003942 Ga0587067_003942_351_1802 450
132 iso_pu_bacteria 2593339238 2595446240 450
133 iso_pu_bacteria 2842918807 2842919128 450
134 iso_pu_bacteria 2919404418 2919405531 450
135 iso_pu_bacteria 2919425241 2919426468 450
136 3300013104 Ga0157370_10107432 Ga0157370_101074322 451
137 3300025226 Ga0209674_101630 Ga0209674_1016304 451
138 3300025233 Ga0209437_101006 Ga0209437_1010067 451
139 iso_pu_bacteria 2593339239 2595452314 451
140 3300009545 Ga0105237_10167205 Ga0105237_101672053 452
141 3300009551 Ga0105238_10061853 Ga0105238_100618534 452
142 3300042184 Ga0450908_000182 Ga0450908_000182_4951_6315 452
143 3300003578 Ga0006562J51391_1080725 Ga0006562J51391_10807253 453
144 3300003578 Ga0006562J51391_1080727 Ga0006562J51391_10807272 453
145 3300005337 Ga0070682_100009987 Ga0070682_1000099873 453
146 3300005337 Ga0070682_100034682 Ga0070682_1000346822 453
147 3300005344 Ga0070661_100003860 Ga0070661_1000038603 453
148 3300005366 Ga0070659_100007618 Ga0070659_1000076183 453
149 3300005435 Ga0070714_100000650 Ga0070714_10000065025 453
150 3300005435 Ga0070714_100013440 Ga0070714_1000134403 453
151 3300005435 Ga0070714_100029381 Ga0070714_1000293812 453
152 3300005436 Ga0070713_100002503 Ga0070713_1000025035 453
153 3300005457 Ga0070662_100004147 Ga0070662_1000041478 453
154 3300005546 Ga0070696_100065167 Ga0070696_1000651672 453
155 3300005563 Ga0068855_100100042 Ga0068855_1001000423 453
156 3300009093 Ga0105240_10191020 Ga0105240_101910202 453
157 3300009545 Ga0105237_10015638 Ga0105237_100156389 453
158 3300013100 Ga0157373_10029342 Ga0157373_100293422 453
159 3300013104 Ga0157370_10053724 Ga0157370_100537243 453
160 3300015262 Ga0182007_10007401 Ga0182007_100074012 453
161 3300025226 Ga0209674_101669 Ga0209674_1016694 453
162 3300025250 Ga0209026_1000405 Ga0209026_100040513 453
163 3300025250 Ga0209026_1003894 Ga0209026_10038942 453
164 3300025256 Ga0209759_1004047 Ga0209759_10040476 453
165 3300025256 Ga0209759_1006468 Ga0209759_10064682 453
166 3300025272 Ga0209455_1000338 Ga0209455_100033834 453
167 3300025904 Ga0207647_10010039 Ga0207647_100100392 453
168 3300025909 Ga0207705_10008424 Ga0207705_100084243 453
169 3300025912 Ga0207707_10065653 Ga0207707_100656531 453
170 3300025913 Ga0207695_10003762 Ga0207695_1000376215 453
171 3300025914 Ga0207671_10001911 Ga0207671_1000191128 453
172 3300025919 Ga0207657_10046282 Ga0207657_100462823 453
173 3300025920 Ga0207649_10064606 Ga0207649_100646062 453
174 3300025928 Ga0207700_10000795 Ga0207700_100007956 453
175 3300025929 Ga0207664_10000239 Ga0207664_1000023936 453
176 3300025929 Ga0207664_10004850 Ga0207664_100048503 453
177 3300025932 Ga0207690_10000448 Ga0207690_1000044825 453
178 3300025932 Ga0207690_10000586 Ga0207690_1000058617 453
179 3300025933 Ga0207706_10025381 Ga0207706_100253813 453
180 3300025949 Ga0207667_10062904 Ga0207667_100629044 453
181 3300026078 Ga0207702_10162690 Ga0207702_101626902 453
182 3300042000 Ga0439437_001522 Ga0439437_001522_993_2381 453
183 3300045976 Ga0466967_0096721 Ga0466967_0096721_201_1679 453
184 3300049568 Ga0501031_0072719 Ga0501031_0072719_431_1819 453
185 3300049570 Ga0501033_0010579 Ga0501033_0010579_806_2284 453
186 3300049573 Ga0501037_0102847 Ga0501037_0102847_457_1845 453
187 3300049579 Ga0501043_0050036 Ga0501043_0050036_26_1474 453
188 3300049581 Ga0501047_0010880 Ga0501047_0010880_3656_5044 453
189 3300049823 Ga0501044_0012365 Ga0501044_0012365_395_1783 453
190 3300049823 Ga0501044_0070741 Ga0501044_0070741_1958_3436 453
191 3300005262 Ga0065165_1000001 Ga0065165_1000001273 454
192 3300005466 Ga0070685_10008623 Ga0070685_100086234 454
193 3300025254 Ga0209148_1003786 Ga0209148_10037862 454
194 3300025258 Ga0209129_1000720 Ga0209129_10007206 454
195 3300025297 Ga0209758_1022053 Ga0209758_10220532 454
196 3300041404 Ga0439436_0000001 Ga0439436_0000001_48838_50211 454
197 3300041456 Ga0451795_0984472 Ga0451795_0984472_160_1539 454
198 3300046471 Ga0495650_0060361 Ga0495650_0060361_70_1458 454
199 3300046491 Ga0495584_0004400 Ga0495584_0004400_4718_6106 454
200 3300046492 Ga0495585_0036691 Ga0495585_0036691_629_2017 454
201 3300046501 Ga0495607_0000010 Ga0495607_0000010_39651_41039 454
202 3300046501 Ga0495607_0001982 Ga0495607_0001982_3103_4479 454
203 3300046506 Ga0495583_0007900 Ga0495583_0007900_2746_4134 454
204 3300046507 Ga0495606_0000150 Ga0495606_0000150_113764_115152 454
205 3300046512 Ga0495610_0000951 Ga0495610_0000951_15143_16516 454
206 3300046513 Ga0495616_0000001 Ga0495616_0000001_554777_556165 454
207 3300046513 Ga0495616_0009886 Ga0495616_0009886_3506_4894 454
208 3300046519 Ga0495632_0026972 Ga0495632_0026972_1373_2761 454
209 3300046691 Ga0495670_0010082 Ga0495670_0010082_1983_3371 454
210 3300046691 Ga0495670_0010728 Ga0495670_0010728_2536_3924 454
211 3300046794 Ga0495589_0000016 Ga0495589_0000016_38211_39599 454
212 3300046810 Ga0495660_0000116 Ga0495660_0000116_46278_47666 454
213 3300047323 Ga0495683_0001193 Ga0495683_0001193_9051_10439 454
214 3300047469 Ga0495673_0001814 Ga0495673_0001814_10596_11984 454
215 3300047472 Ga0495686_0000115 Ga0495686_0000115_44562_45941 454
216 3300048924 Ga0496121_0000905 Ga0496121_0000905_17574_18962 454
217 3300049459 Ga0495678_000475 Ga0495678_000475_37852_39240 454
218 3300049586 Ga0501070_0192870 Ga0501070_0192870_167_1579 454
219 3300049822 Ga0501035_0063333 Ga0501035_0063333_1583_2971 454
220 3300049823 Ga0501044_0069727 Ga0501044_0069727_1708_3096 454
221 3300053087 Ga0500643_000002 Ga0500643_000002_495327_496715 454
222 3300053103 Ga0500555_000288 Ga0500555_000288_1500_2888 454
223 3300001979 JGI24740J21852_10007871 JGI24740J21852_100078715 457
224 3300001989 JGI24739J22299_10000022 JGI24739J22299_1000002218 457
225 3300001990 JGI24737J22298_10000260 JGI24737J22298_100002607 457
226 3300003578 Ga0006562J51391_1125941 Ga0006562J51391_11259412 457
227 3300005563 Ga0068855_100003571 Ga0068855_10000357113 457
228 3300005563 Ga0068855_100007217 Ga0068855_1000072174 457
229 3300005577 Ga0068857_100000491 Ga0068857_1000004915 457
230 3300005578 Ga0068854_100000046 Ga0068854_10000004657 457
231 3300005578 Ga0068854_100001951 Ga0068854_1000019514 457
232 3300005834 Ga0068851_10000867 Ga0068851_100008676 457
233 3300009093 Ga0105240_10006617 Ga0105240_1000661713 457
234 3300009093 Ga0105240_10029366 Ga0105240_100293663 457
235 3300009545 Ga0105237_10000016 Ga0105237_1000001668 457
236 3300010375 Ga0105239_10024159 Ga0105239_100241596 457
237 3300025258 Ga0209129_1000793 Ga0209129_10007937 457
238 3300025297 Ga0209758_1000290 Ga0209758_100029069 457
239 3300025321 Ga0207656_10002711 Ga0207656_100027113 457
240 3300025904 Ga0207647_10006945 Ga0207647_100069453 457
241 3300025913 Ga0207695_10000307 Ga0207695_1000030733 457
242 3300025914 Ga0207671_10000013 Ga0207671_1000001358 457
243 3300025945 Ga0207679_10155292 Ga0207679_101552921 457
244 3300025949 Ga0207667_10000040 Ga0207667_10000040141 457
245 3300025949 Ga0207667_10000047 Ga0207667_10000047108 457
246 3300025981 Ga0207640_10000009 Ga0207640_10000009142 457
247 3300026116 Ga0207674_10000012 Ga0207674_1000001274 457
248 3300048928 Ga0496125_0000044 Ga0496125_0000044_86170_87543 457

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00144

Beta-lactamase

Beta-lactamase

193

520

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dc1-assembly1.cif.gz_A structural and biochemical characterization of l. interrogans lsa45 reveals a penicillin-binding protein with esterase activity 0.8623 139 454
2zm7-assembly1.cif.gz_A structure of 6-aminohexanoate-dimer hydrolase, s112a/g181d mutant complexed with 6-aminohexanoate-dimer 0.7797 138 457
6kjq-assembly1.cif.gz_A functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors 0.7775 139 449
6kjr-assembly1.cif.gz_A functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors 0.7745 140 449
7pp8-assembly1.cif.gz_A structure of ester-hydrolase eh7 from metagenome of marine sediments at milazzo harbor (sicily, italy) complexed with a derivative of methyl 4-nitrophenyl hexylphosphonate 0.7699 140 453
ID Description Score Start End Superfamily
af_Q9VR38_111_527_3.30.450.70 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.7661 139 183 3.30.450.70
af_P71981_7_386_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.7608 118 452 3.40.710.10
af_P9WLZ3_5_376_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.757 155 434 3.40.710.10
3i7jB00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.7521 143 456 3.40.710.10
af_P77619_23_410_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.7466 131 439 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A0F3KAF1-F1-model_v4 Beta-lactamase-related domain-containing protein 0.9887 28 457
AF-A0A7U1E4U4-F1-model_v4 deleted 0.9708 264 455
AF-A0A2M8J108-F1-model_v4 Serine hydrolase 0.9654 140 450 GO:0016787
AF-A0A316IJ58-F1-model_v4 Beta-lactamase 0.9636 204 389
AF-A0A0F3KAF1-F1-model_v4 Beta-lactamase-related domain-containing protein 0.9598 28 457

Feature Viewer

pLDDT pTM Quality
90.49 0.91 High
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Predicted Structure (AlphaFold2)

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