F359837

General Info

Members Datasets Scaffolds Average Seq Length
248 170 227 226

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_10491098|Ga0105245_104910982
Length 264
Sequence MSSMMGLKFETCKTKPAPDGHHLSVISGRVESLGFGRTSMRVLLVEDSERLQRSVGTGLRKAGYAVDVTGDGEQGLWYAKGNDYDVIVLDLMLPRLDGLSVLRKLRESGKDTHVLILTAKDTVDDRVAGLRSGADDYLIKPFAFDELLARVQALARRSHGVKRQLVEIADLQIDLTTRTVRRGQRTLDLPPREFALLEYLAMRRGQLVTRTQIESHIYDDQVEPMSNVVEAAIYSLRKKIDRAGAPSLIQTRRGMGYILGDSNP

Samples

Sample ID Description Type Environment
1 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
2 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
3 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
4 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
5 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
6 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
7 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
8 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
9 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
10 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
11 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
12 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
13 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
14 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
15 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
16 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
17 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
18 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
19 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
20 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
45 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
93 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
94 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
95 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
96 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
97 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
108 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
109 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
110 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
111 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
112 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
120 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
121 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
122 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
123 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
124 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
125 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
126 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
127 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
128 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
129 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
130 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
131 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
137 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
138 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
150 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
151 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
152 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
164 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
165 3300060243 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 1R_CW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
166 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
167 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
168 8022792930 Bacillus sp. Xin Isolate Rhizosphere
169 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
170 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.13
Metatranscriptomes 0.4
Isolates 8.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.03
Nodule 0
Rhizoplane 1.21
Rhizosphere 89.92
Stem 0
Stem Tuber 0
Unclassified 4.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10027682 3300003187 Bacteria 2268
2 JGI25151J46595_10028659 3300003187 Bacteria 2214
3 rootH2_10005191 3300003320 Bacteria 12388
4 Ga0055541_1005350 3300003841 Bacteria 2248
5 Ga0070675_100000011 3300005354 Bacteria 242011
6 Ga0070667_100422534 3300005367 Bacteria 1215
7 Ga0070709_10015322 3300005434 Bacteria 4360
8 Ga0070709_10609539 3300005434 Bacteria 841
9 Ga0070714_100011318 3300005435 Bacteria 7076
10 Ga0070714_100034098 3300005435 Bacteria 4261
11 Ga0070710_10195587 3300005437 Bacteria 1274
12 Ga0070694_100849760 3300005444 Bacteria 751
13 Ga0070706_100172287 3300005467 Bacteria 2021
14 Ga0070706_100296192 3300005467 Bacteria 1510
15 Ga0070707_100427730 3300005468 Bacteria 1284
16 Ga0070679_100145435 3300005530 Bacteria 2348
17 Ga0070679_100287409 3300005530 Bacteria 1596
18 Ga0070684_100248605 3300005535 Bacteria 1625
19 Ga0070697_100409581 3300005536 Bacteria 1177
20 Ga0068853_100273039 3300005539 Bacteria 1557
21 Ga0070665_100047453 3300005548 Bacteria 4311
22 Ga0070665_100127323 3300005548 Bacteria 2549
23 Ga0068855_100000789 3300005563 Bacteria 39145
24 Ga0068855_100006909 3300005563 Bacteria 13765
25 Ga0068855_100587384 3300005563 Bacteria 1202
26 Ga0070664_100262206 3300005564 Bacteria 1555
27 Ga0068857_100244024 3300005577 Bacteria 1645
28 Ga0068856_100033681 3300005614 Bacteria 5016
29 Ga0068856_100165972 3300005614 Bacteria 2219
30 Ga0068856_100389024 3300005614 Bacteria 1414
31 Ga0068864_100341376 3300005618 Bacteria 1411
32 Ga0068864_100801255 3300005618 Bacteria 926
33 Ga0068858_100053198 3300005842 Bacteria 3746
34 Ga0068858_100212834 3300005842 Bacteria 1829
35 Ga0068860_100000012 3300005843 Bacteria 326398
36 Ga0068860_100119309 3300005843 Bacteria 2525
37 Ga0068860_100338480 3300005843 Bacteria 1479
38 Ga0068862_100340896 3300005844 Bacteria 1388
39 Ga0081455_10023001 3300005937 Bacteria 5810
40 Ga0070717_10035656 3300006028 Bacteria 4029
41 Ga0070715_10242843 3300006163 Bacteria 937
42 Ga0070716_100421798 3300006173 Bacteria 965
43 Ga0075428_100056908 3300006844 Bacteria 4281
44 Ga0075428_100066685 3300006844 Bacteria 3941
45 Ga0075428_100471609 3300006844 Bacteria 1344
46 Ga0075430_100019058 3300006846 Bacteria 5838
47 Ga0075430_100020607 3300006846 Bacteria 5609
48 Ga0075430_100034958 3300006846 Bacteria 4266
49 Ga0075431_100088807 3300006847 Bacteria 3190
50 Ga0075431_100157760 3300006847 Bacteria 2334
51 Ga0075431_100209804 3300006847 Bacteria 1990
52 Ga0075431_100277961 3300006847 Bacteria 1695
53 Ga0075429_100058681 3300006880 Bacteria 3352
54 Ga0075429_100612445 3300006880 Bacteria 954
55 Ga0075436_100508494 3300006914 Bacteria 882
56 Ga0105240_10004389 3300009093 Bacteria 21534
57 Ga0105240_10039992 3300009093 Bacteria 6003
58 Ga0105240_10159878 3300009093 Bacteria 2677
59 Ga0105240_10210240 3300009093 Bacteria 2274
60 Ga0105240_10323147 3300009093 Bacteria 1758
61 Ga0111539_10024706 3300009094 Bacteria 7370
62 Ga0111539_10113239 3300009094 Bacteria 3182
63 Ga0111539_10366044 3300009094 Bacteria 1678
64 Ga0105245_10000009 3300009098 Bacteria 279713
65 Ga0105245_10491098 3300009098 Bacteria 1242
66 Ga0114129_10532630 3300009147 Bacteria 1530
67 Ga0114129_11029200 3300009147 Bacteria 1035
68 Ga0105242_11411030 3300009176 Bacteria 724
69 Ga0105237_10030035 3300009545 Bacteria 5521
70 Ga0105237_10075895 3300009545 Bacteria 3352
71 Ga0105237_10142541 3300009545 Bacteria 2390
72 Ga0105238_10000953 3300009551 Bacteria 29654
73 Ga0105238_10390463 3300009551 Bacteria 1384
74 Ga0105239_10100695 3300010375 Bacteria 3196
75 Ga0105239_10407459 3300010375 Bacteria 1539
76 Ga0157371_10136053 3300013102 Bacteria 1750
77 Ga0157370_10034281 3300013104 Bacteria 4945
78 Ga0157370_10324667 3300013104 Bacteria 1419
79 Ga0157374_10233644 3300013296 Bacteria 1807
80 Ga0157374_10638018 3300013296 Bacteria 1076
81 Ga0157378_10381476 3300013297 Bacteria 1384
82 Ga0163162_11163688 3300013306 Bacteria 875
83 Ga0157372_10485109 3300013307 Bacteria 1441
84 Ga0157372_10594877 3300013307 Bacteria 1289
85 Ga0157372_10721587 3300013307 Bacteria 1159
86 Ga0157372_10887485 3300013307 Bacteria 1035
87 Ga0157380_10178852 3300014326 Bacteria 1862
88 Ga0157379_10305295 3300014968 Bacteria 1451
89 Ga0157376_10016642 3300014969 Bacteria 5588
90 Ga0209566_100092 3300025225 Bacteria 137641
91 Ga0209566_101067 3300025225 Bacteria 10868
92 Ga0209258_104949 3300025242 Bacteria 2379
93 Ga0209676_1017950 3300025292 Bacteria 2483
94 Ga0209025_1003146 3300025294 Bacteria 16111
95 Ga0209025_1004651 3300025294 Bacteria 11737
96 Ga0207695_10000337 3300025913 Bacteria 110325
97 Ga0207695_10052394 3300025913 Bacteria 4276
98 Ga0207695_10070518 3300025913 Bacteria 3572
99 Ga0207695_10262968 3300025913 Bacteria 1622
100 Ga0207671_10017458 3300025914 Bacteria 5530
101 Ga0207671_10044125 3300025914 Bacteria 3296
102 Ga0207660_10121081 3300025917 Bacteria 1982
103 Ga0207652_10008571 3300025921 Bacteria 8228
104 Ga0207652_10825661 3300025921 Bacteria 822
105 Ga0207694_10279205 3300025924 Bacteria 1372
106 Ga0207659_10000003 3300025926 Bacteria 523949
107 Ga0207687_10000124 3300025927 Bacteria 51583
108 Ga0207664_10348616 3300025929 Bacteria 1310
109 Ga0207670_10112142 3300025936 Bacteria 1967
110 Ga0207670_10424018 3300025936 Bacteria 1068
111 Ga0207711_10709823 3300025941 Bacteria 938
112 Ga0207661_10309987 3300025944 Bacteria 1417
113 Ga0207667_10000543 3300025949 Bacteria 49789
114 Ga0207667_10037631 3300025949 Bacteria 5171
115 Ga0207651_10193499 3300025960 Bacteria 1624
116 Ga0207658_10389904 3300025986 Bacteria 1222
117 Ga0207702_10084595 3300026078 Bacteria 2762
118 Ga0207702_10208466 3300026078 Bacteria 1816
119 Ga0207641_10507320 3300026088 Bacteria 1172
120 Ga0207676_10450019 3300026095 Bacteria 1214
121 Ga0207676_10612124 3300026095 Bacteria 1047
122 Ga0207674_10098213 3300026116 Bacteria 2912
123 Ga0268266_10032251 3300028379 Bacteria 4452
124 Ga0268266_10081903 3300028379 Bacteria 2814
125 Ga0268266_10283439 3300028379 Bacteria 1541
126 Ga0268264_10000424 3300028381 Bacteria 58819
127 Ga0268264_10100431 3300028381 Bacteria 2513
128 Ga0268264_10628220 3300028381 Bacteria 1061
129 Ga0268264_10679649 3300028381 Bacteria 1021
130 Ga0265319_1000069 3300028563 Bacteria 82640
131 Ga0265334_10115852 3300028573 Bacteria 960
132 Ga0265338_10011906 3300028800 Bacteria 9990
133 Ga0265338_10081123 3300028800 Bacteria 2722
134 Ga0265338_10285395 3300028800 Bacteria 1205
135 Ga0265316_10128414 3300031344 Bacteria 1910
136 Ga0307509_10001283 3300031507 Bacteria 42644
137 Ga0307509_10003077 3300031507 Bacteria 25910
138 Ga0307408_100038715 3300031548 Bacteria 3366
139 Ga0265314_10127460 3300031711 Bacteria 1592
140 Ga0307409_100054862 3300031995 Bacteria 3072
141 Ga0307409_100805872 3300031995 Bacteria 947
142 Ga0307416_100674239 3300032002 Bacteria 1121
143 Ga0373926_0037458 3300035083 Bacteria 1725
144 Ga0373937_0017136 3300036401 Bacteria 6446
145 Ga0373937_0184988 3300036401 Bacteria 1957
146 Ga0373925_0439609 3300037068 Bacteria 1067
147 Ga0395905_0030595 3300037471 Bacteria 5071
148 Ga0436364_0041721 3300037853 Bacteria 972
149 Ga0436365_0057062 3300039437 Bacteria 1674
150 Ga0436360_1140878 3300039438 Bacteria 1184
151 Ga0439456_064515 3300042013 Bacteria 807
152 Ga0439435_0019546 3300042436 Bacteria 1738
153 Ga0466969_0011490 3300044656 Bacteria 4687
154 Ga0453683_0131462 3300044673 Bacteria 1577
155 Ga0466966_0053155 3300044684 Bacteria 2570
156 Ga0453684_0002125 3300044712 Bacteria 49881
157 Ga0453684_0007087 3300044712 Bacteria 20916
158 Ga0453684_0106134 3300044712 Bacteria 3424
159 Ga0466960_0180561 3300044901 Bacteria 1144
160 Ga0466959_0001695 3300045049 Bacteria 13680
161 Ga0466959_0375939 3300045049 Bacteria 967
162 Ga0451576_0164855 3300045051 Bacteria 2312
163 Ga0451576_0375312 3300045051 Bacteria 1490
164 Ga0466967_0059108 3300045976 Bacteria 3392
165 Ga0466967_0369035 3300045976 Bacteria 1392
166 Ga0466967_1050595 3300045976 Bacteria 811
167 Ga0495592_0325491 3300046454 Bacteria 992
168 Ga0495591_045304 3300046458 Bacteria 1227
169 Ga0495629_0028599 3300046459 Unclassified 3956
170 Ga0495651_0388119 3300046462 Bacteria 914
171 Ga0495650_0056638 3300046471 Bacteria 1590
172 Ga0495580_0020603 3300046472 Bacteria 4878
173 Ga0495639_0028481 3300046475 Bacteria 2475
174 Ga0495662_0012124 3300046476 Bacteria 4211
175 Ga0495630_0000002 3300046517 Bacteria 1277125
176 Ga0495637_0076046 3300046520 Bacteria 1346
177 Ga0495666_0029570 3300046526 Bacteria 2695
178 Ga0495640_0109204 3300046533 Bacteria 1809
179 Ga0495661_0296217 3300046665 Bacteria 811
180 Ga0495658_0181172 3300046683 Bacteria 1307
181 Ga0495658_0420930 3300046683 Bacteria 852
182 Ga0495613_0284874 3300046689 Bacteria 1147
183 Ga0495581_0245554 3300047315 Bacteria 1047
184 Ga0495680_0046492 3300047322 Bacteria 3422
185 Ga0495602_0088497 3300048088 Bacteria 2578
186 Ga0496108_0022250 3300048911 Bacteria 5213
187 Ga0496111_0010817 3300048914 Bacteria 6133
188 Ga0496116_0028373 3300048919 Bacteria 4056
189 Ga0501033_0444293 3300049570 Bacteria 901
190 Ga0501034_0468518 3300049571 Bacteria 1176
191 Ga0501036_0199966 3300049572 Bacteria 1681
192 Ga0501036_0315171 3300049572 Bacteria 1307
193 Ga0501040_0022182 3300049576 Bacteria 4248
194 Ga0501046_0279634 3300049580 Bacteria 1223
195 Ga0501046_0401330 3300049580 Bacteria 990
196 Ga0501070_0201824 3300049586 Bacteria 1633
197 Ga0501072_0160715 3300049588 Bacteria 1792
198 Ga0501073_0483218 3300049589 Bacteria 856
199 Ga0501075_0136852 3300049591 Bacteria 1866
200 Ga0501076_0004102 3300049592 Bacteria 10297
201 Ga0501077_0348934 3300049593 Bacteria 944
202 Ga0501208_003791 3300049655 Bacteria 1728
203 Ga0501217_002115 3300049661 Bacteria 3854
204 Ga0501079_0590292 3300049741 Bacteria 874
205 Ga0501080_0034295 3300049742 Bacteria 4737
206 Ga0501080_0233145 3300049742 Bacteria 1682
207 Ga0501081_0117109 3300049743 Bacteria 1895
208 Ga0501035_0484903 3300049822 Bacteria 1019
209 Ga0501044_0004819 3300049823 Bacteria 15091
210 Ga0501044_0024032 3300049823 Bacteria 6474
211 Ga0501045_0072693 3300049824 Bacteria 2532
212 nmdc:mga05p37_402316_c1 3300050507 Bacteria 1598
213 nmdc:mga05p37_418173_c1 3300050507 Bacteria 1561
214 nmdc:mga09592_178024_c1 3300050508 Bacteria 1839
215 nmdc:mga09592_52521_c1 3300050508 Bacteria 3441
216 nmdc:mga0qj67_10247_c1 3300050509 Bacteria 5857
217 nmdc:mga06r32_138507_c1 3300050510 Bacteria 2408
218 nmdc:mga06r32_139597_c1 3300050510 Bacteria 2399
219 nmdc:mga06r32_39347_c1 3300050510 Bacteria 4486
220 nmdc:mga06r32_871657_c1 3300050510 Bacteria 858
221 nmdc:mga08y16_15777_c1 3300050511 Bacteria 7944
222 nmdc:mga08y16_19723_c1 3300050511 Bacteria 7109
223 nmdc:mga08y16_496185_c1 3300050511 Bacteria 1241
224 nmdc:mga0a205_751077_c1 3300050515 Bacteria 824
225 Ga0500578_0021803 3300053086 Bacteria 4115
226 Ga0587060_007048 3300060243 Bacteria 908
227 Ga0530510_0008284 3300061734 Bacteria 7247

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050510 nmdc:mga06r32_871657_c1 nmdc:mga06r32_871657_c1_152_787 190
2 3300039438 Ga0436360_1140878 Ga0436360_1140878_62_748 207
3 3300005577 Ga0068857_100244024 Ga0068857_1002440242 209
4 3300006844 Ga0075428_100471609 Ga0075428_1004716092 209
5 3300009545 Ga0105237_10075895 Ga0105237_100758952 209
6 3300013306 Ga0163162_11163688 Ga0163162_111636881 209
7 3300025914 Ga0207671_10044125 Ga0207671_100441252 209
8 3300046454 Ga0495592_0325491 Ga0495592_0325491_78_761 209
9 3300049823 Ga0501044_0024032 Ga0501044_0024032_1336_2037 211
10 3300050507 nmdc:mga05p37_402316_c1 nmdc:mga05p37_402316_c1_142_852 211
11 3300053086 Ga0500578_0021803 Ga0500578_0021803_908_1576 214
12 3300045976 Ga0466967_1050595 Ga0466967_1050595_18_674 215
13 3300046472 Ga0495580_0020603 Ga0495580_0020603_305_958 215
14 3300049588 Ga0501072_0160715 Ga0501072_0160715_1092_1751 215
15 3300005467 Ga0070706_100296192 Ga0070706_1002961922 216
16 3300013307 Ga0157372_10594877 Ga0157372_105948771 216
17 3300003320 rootH2_10005191 rootH2_100051917 217
18 3300005467 Ga0070706_100172287 Ga0070706_1001722871 217
19 3300005468 Ga0070707_100427730 Ga0070707_1004277302 217
20 3300014326 Ga0157380_10178852 Ga0157380_101788521 217
21 3300032002 Ga0307416_100674239 Ga0307416_1006742392 217
22 3300005530 Ga0070679_100145435 Ga0070679_1001454352 218
23 3300005563 Ga0068855_100006909 Ga0068855_10000690912 218
24 3300005614 Ga0068856_100033681 Ga0068856_1000336812 218
25 3300005937 Ga0081455_10023001 Ga0081455_100230015 218
26 3300006028 Ga0070717_10035656 Ga0070717_100356564 218
27 3300009098 Ga0105245_10000009 Ga0105245_1000000939 218
28 3300009176 Ga0105242_11411030 Ga0105242_114110301 218
29 3300014969 Ga0157376_10016642 Ga0157376_100166422 218
30 3300025917 Ga0207660_10121081 Ga0207660_101210812 218
31 3300025921 Ga0207652_10008571 Ga0207652_100085718 218
32 3300025927 Ga0207687_10000124 Ga0207687_1000012436 218
33 3300025944 Ga0207661_10309987 Ga0207661_103099872 218
34 3300025949 Ga0207667_10000543 Ga0207667_1000054320 218
35 3300026078 Ga0207702_10208466 Ga0207702_102084662 218
36 3300026116 Ga0207674_10098213 Ga0207674_100982133 218
37 3300031507 Ga0307509_10003077 Ga0307509_100030778 218
38 3300031711 Ga0265314_10127460 Ga0265314_101274602 218
39 3300044901 Ga0466960_0180561 Ga0466960_0180561_196_855 218
40 3300045976 Ga0466967_0369035 Ga0466967_0369035_544_1248 218
41 3300046471 Ga0495650_0056638 Ga0495650_0056638_546_1208 218
42 3300005564 Ga0070664_100262206 Ga0070664_1002622062 219
43 3300005843 Ga0068860_100000012 Ga0068860_100000012185 219
44 3300006914 Ga0075436_100508494 Ga0075436_1005084941 219
45 3300009094 Ga0111539_10024706 Ga0111539_100247065 219
46 3300010375 Ga0105239_10407459 Ga0105239_104074592 219
47 3300028381 Ga0268264_10000424 Ga0268264_1000042480 219
48 3300045049 Ga0466959_0375939 Ga0466959_0375939_224_895 219
49 3300049571 Ga0501034_0468518 Ga0501034_0468518_280_951 219
50 3300049586 Ga0501070_0201824 Ga0501070_0201824_212_877 219
51 3300050511 nmdc:mga08y16_19723_c1 nmdc:mga08y16_19723_c1_5061_5729 219
52 3300006846 Ga0075430_100019058 Ga0075430_1000190589 220
53 3300006847 Ga0075431_100157760 Ga0075431_1001577604 220
54 3300006880 Ga0075429_100612445 Ga0075429_1006124452 220
55 3300044712 Ga0453684_0002125 Ga0453684_0002125_27266_27937 220
56 3300045976 Ga0466967_0059108 Ga0466967_0059108_2375_3046 220
57 3300050508 nmdc:mga09592_178024_c1 nmdc:mga09592_178024_c1_928_1599 220
58 3300050509 nmdc:mga0qj67_10247_c1 nmdc:mga0qj67_10247_c1_3667_4338 220
59 3300050510 nmdc:mga06r32_139597_c1 nmdc:mga06r32_139597_c1_1536_2207 220
60 3300005367 Ga0070667_100422534 Ga0070667_1004225341 221
61 3300005434 Ga0070709_10015322 Ga0070709_100153223 221
62 3300005435 Ga0070714_100011318 Ga0070714_1000113185 221
63 3300005437 Ga0070710_10195587 Ga0070710_101955871 221
64 3300005444 Ga0070694_100849760 Ga0070694_1008497601 221
65 3300005530 Ga0070679_100287409 Ga0070679_1002874091 221
66 3300005535 Ga0070684_100248605 Ga0070684_1002486052 221
67 3300005536 Ga0070697_100409581 Ga0070697_1004095811 221
68 3300005539 Ga0068853_100273039 Ga0068853_1002730392 221
69 3300005548 Ga0070665_100047453 Ga0070665_1000474534 221
70 3300005563 Ga0068855_100000789 Ga0068855_10000078927 221
71 3300005563 Ga0068855_100587384 Ga0068855_1005873842 221
72 3300005614 Ga0068856_100165972 Ga0068856_1001659722 221
73 3300005614 Ga0068856_100389024 Ga0068856_1003890243 221
74 3300005618 Ga0068864_100341376 Ga0068864_1003413761 221
75 3300005618 Ga0068864_100801255 Ga0068864_1008012552 221
76 3300005842 Ga0068858_100053198 Ga0068858_1000531982 221
77 3300005842 Ga0068858_100212834 Ga0068858_1002128342 221
78 3300005843 Ga0068860_100119309 Ga0068860_1001193092 221
79 3300006163 Ga0070715_10242843 Ga0070715_102428432 221
80 3300006173 Ga0070716_100421798 Ga0070716_1004217982 221
81 3300006844 Ga0075428_100066685 Ga0075428_1000666852 221
82 3300009093 Ga0105240_10004389 Ga0105240_1000438919 221
83 3300009093 Ga0105240_10039992 Ga0105240_100399923 221
84 3300009093 Ga0105240_10159878 Ga0105240_101598782 221
85 3300009093 Ga0105240_10210240 Ga0105240_102102403 221
86 3300009093 Ga0105240_10323147 Ga0105240_103231472 221
87 3300009094 Ga0111539_10113239 Ga0111539_101132392 221
88 3300009094 Ga0111539_10366044 Ga0111539_103660442 221
89 3300009147 Ga0114129_11029200 Ga0114129_110292002 221
90 3300009545 Ga0105237_10030035 Ga0105237_100300353 221
91 3300009545 Ga0105237_10142541 Ga0105237_101425412 221
92 3300009551 Ga0105238_10000953 Ga0105238_1000095330 221
93 3300009551 Ga0105238_10390463 Ga0105238_103904632 221
94 3300010375 Ga0105239_10100695 Ga0105239_101006954 221
95 3300013104 Ga0157370_10034281 Ga0157370_100342817 221
96 3300013104 Ga0157370_10324667 Ga0157370_103246672 221
97 3300013296 Ga0157374_10233644 Ga0157374_102336441 221
98 3300013296 Ga0157374_10638018 Ga0157374_106380182 221
99 3300013297 Ga0157378_10381476 Ga0157378_103814762 221
100 3300013307 Ga0157372_10485109 Ga0157372_104851092 221
101 3300013307 Ga0157372_10721587 Ga0157372_107215871 221
102 3300013307 Ga0157372_10887485 Ga0157372_108874851 221
103 3300025913 Ga0207695_10000337 Ga0207695_1000033767 221
104 3300025913 Ga0207695_10052394 Ga0207695_100523943 221
105 3300025913 Ga0207695_10070518 Ga0207695_100705184 221
106 3300025913 Ga0207695_10262968 Ga0207695_102629682 221
107 3300025914 Ga0207671_10017458 Ga0207671_100174583 221
108 3300025921 Ga0207652_10825661 Ga0207652_108256611 221
109 3300025924 Ga0207694_10279205 Ga0207694_102792051 221
110 3300025936 Ga0207670_10112142 Ga0207670_101121423 221
111 3300025941 Ga0207711_10709823 Ga0207711_107098231 221
112 3300025949 Ga0207667_10037631 Ga0207667_100376315 221
113 3300025986 Ga0207658_10389904 Ga0207658_103899042 221
114 3300026078 Ga0207702_10084595 Ga0207702_100845953 221
115 3300026088 Ga0207641_10507320 Ga0207641_105073201 221
116 3300026095 Ga0207676_10450019 Ga0207676_104500192 221
117 3300026095 Ga0207676_10612124 Ga0207676_106121242 221
118 3300028379 Ga0268266_10032251 Ga0268266_100322514 221
119 3300028379 Ga0268266_10283439 Ga0268266_102834392 221
120 3300028381 Ga0268264_10100431 Ga0268264_101004314 221
121 3300028563 Ga0265319_1000069 Ga0265319_100006931 221
122 3300028573 Ga0265334_10115852 Ga0265334_101158522 221
123 3300028800 Ga0265338_10011906 Ga0265338_100119064 221
124 3300028800 Ga0265338_10081123 Ga0265338_100811231 221
125 3300028800 Ga0265338_10285395 Ga0265338_102853951 221
126 3300031344 Ga0265316_10128414 Ga0265316_101284142 221
127 3300031507 Ga0307509_10001283 Ga0307509_1000128331 221
128 3300031548 Ga0307408_100038715 Ga0307408_1000387154 221
129 3300031995 Ga0307409_100054862 Ga0307409_1000548623 221
130 3300036401 Ga0373937_0017136 Ga0373937_0017136_89_769 221
131 3300036401 Ga0373937_0184988 Ga0373937_0184988_920_1603 221
132 3300037068 Ga0373925_0439609 Ga0373925_0439609_40_714 221
133 3300037853 Ga0436364_0041721 Ga0436364_0041721_63_737 221
134 3300039437 Ga0436365_0057062 Ga0436365_0057062_906_1583 221
135 3300042013 Ga0439456_064515 Ga0439456_064515_32_712 221
136 3300042436 Ga0439435_0019546 Ga0439435_0019546_919_1599 221
137 3300044673 Ga0453683_0131462 Ga0453683_0131462_72_749 221
138 3300044712 Ga0453684_0007087 Ga0453684_0007087_10076_10747 221
139 3300044712 Ga0453684_0106134 Ga0453684_0106134_153_827 221
140 3300045049 Ga0466959_0001695 Ga0466959_0001695_7374_8054 221
141 3300046459 Ga0495629_0028599 Ga0495629_0028599_180_866 221
142 3300046462 Ga0495651_0388119 Ga0495651_0388119_182_862 221
143 3300046475 Ga0495639_0028481 Ga0495639_0028481_72_746 221
144 3300046476 Ga0495662_0012124 Ga0495662_0012124_3060_3734 221
145 3300046517 Ga0495630_0000002 Ga0495630_0000002_903882_904556 221
146 3300046533 Ga0495640_0109204 Ga0495640_0109204_881_1567 221
147 3300046683 Ga0495658_0181172 Ga0495658_0181172_112_798 221
148 3300046689 Ga0495613_0284874 Ga0495613_0284874_456_1130 221
149 3300047315 Ga0495581_0245554 Ga0495581_0245554_171_845 221
150 3300047322 Ga0495680_0046492 Ga0495680_0046492_1728_2414 221
151 3300048088 Ga0495602_0088497 Ga0495602_0088497_122_802 221
152 3300048911 Ga0496108_0022250 Ga0496108_0022250_1185_1865 221
153 3300048914 Ga0496111_0010817 Ga0496111_0010817_2671_3387 221
154 3300049570 Ga0501033_0444293 Ga0501033_0444293_62_745 221
155 3300049572 Ga0501036_0199966 Ga0501036_0199966_917_1600 221
156 3300049572 Ga0501036_0315171 Ga0501036_0315171_268_951 221
157 3300049576 Ga0501040_0022182 Ga0501040_0022182_1377_2060 221
158 3300049580 Ga0501046_0279634 Ga0501046_0279634_286_972 221
159 3300049580 Ga0501046_0401330 Ga0501046_0401330_235_918 221
160 3300049589 Ga0501073_0483218 Ga0501073_0483218_161_835 221
161 3300049591 Ga0501075_0136852 Ga0501075_0136852_138_821 221
162 3300049592 Ga0501076_0004102 Ga0501076_0004102_6588_7271 221
163 3300049593 Ga0501077_0348934 Ga0501077_0348934_162_842 221
164 3300049741 Ga0501079_0590292 Ga0501079_0590292_89_775 221
165 3300049742 Ga0501080_0034295 Ga0501080_0034295_221_907 221
166 3300049742 Ga0501080_0233145 Ga0501080_0233145_125_808 221
167 3300049743 Ga0501081_0117109 Ga0501081_0117109_833_1516 221
168 3300049822 Ga0501035_0484903 Ga0501035_0484903_60_743 221
169 3300049823 Ga0501044_0004819 Ga0501044_0004819_5614_6312 221
170 3300049824 Ga0501045_0072693 Ga0501045_0072693_1222_1905 221
171 3300050511 nmdc:mga08y16_15777_c1 nmdc:mga08y16_15777_c1_314_991 221
172 3300050511 nmdc:mga08y16_496185_c1 nmdc:mga08y16_496185_c1_484_1155 221
173 3300005354 Ga0070675_100000011 Ga0070675_100000011208 222
174 3300005548 Ga0070665_100127323 Ga0070665_1001273235 222
175 3300005843 Ga0068860_100338480 Ga0068860_1003384802 222
176 3300025926 Ga0207659_10000003 Ga0207659_10000003206 222
177 3300028379 Ga0268266_10081903 Ga0268266_100819035 222
178 3300028381 Ga0268264_10628220 Ga0268264_106282201 222
179 3300028381 Ga0268264_10679649 Ga0268264_106796491 222
180 3300037471 Ga0395905_0030595 Ga0395905_0030595_2540_3214 222
181 3300005434 Ga0070709_10609539 Ga0070709_106095391 223
182 3300005435 Ga0070714_100034098 Ga0070714_1000340984 223
183 3300025929 Ga0207664_10348616 Ga0207664_103486162 223
184 3300025960 Ga0207651_10193499 Ga0207651_101934992 223
185 3300031995 Ga0307409_100805872 Ga0307409_1008058721 223
186 3300061734 Ga0530510_0008284 Ga0530510_0008284_3902_4624 223
187 iso_pu_bacteria 2548877040 2550903574 223
188 iso_pu_bacteria 2571042143 2571529697 223
189 iso_pu_bacteria 2571042588 2573037307 223
190 iso_pu_bacteria 2576861424 2578335058 223
191 iso_pu_bacteria 2579778775 2580930372 223
192 iso_pu_bacteria 2600255286 2601641620 223
193 iso_pu_bacteria 2619619294 2621273150 223
194 iso_pu_bacteria 2728368933 2728531061 223
195 iso_pu_bacteria 2881636855 2881638845 223
196 iso_pu_bacteria 2889049205 2889053445 223
197 iso_pu_bacteria 2938649242 2938651190 223
198 iso_pu_bacteria 2968558590 2968563122 223
199 iso_pu_bacteria 2971403814 2971405433 223
200 iso_pu_bacteria 2971511577 2971516595 223
201 iso_pu_bacteria 2980176882 2980178873 223
202 iso_pu_bacteria 2988225383 2988225724 223
203 iso_pu_bacteria 2996632988 2996637299 223
204 iso_pu_bacteria 8002317523 8002322043 223
205 iso_pu_bacteria 8022792930 8022793826 223
206 iso_pu_bacteria 8046991243 8046999488 223
207 iso_pu_bacteria 8054465665 8054465907 223
208 3300005844 Ga0068862_100340896 Ga0068862_1003408962 224
209 3300006844 Ga0075428_100056908 Ga0075428_1000569083 224
210 3300006846 Ga0075430_100020607 Ga0075430_1000206074 224
211 3300006846 Ga0075430_100034958 Ga0075430_1000349584 224
212 3300006847 Ga0075431_100088807 Ga0075431_1000888071 224
213 3300006847 Ga0075431_100209804 Ga0075431_1002098041 224
214 3300006880 Ga0075429_100058681 Ga0075429_1000586812 224
215 3300009147 Ga0114129_10532630 Ga0114129_105326302 224
216 3300025936 Ga0207670_10424018 Ga0207670_104240182 224
217 3300050507 nmdc:mga05p37_418173_c1 nmdc:mga05p37_418173_c1_850_1533 224
218 3300050508 nmdc:mga09592_52521_c1 nmdc:mga09592_52521_c1_297_980 224
219 3300050510 nmdc:mga06r32_138507_c1 nmdc:mga06r32_138507_c1_1352_2035 224
220 3300050510 nmdc:mga06r32_39347_c1 nmdc:mga06r32_39347_c1_3307_3990 224
221 3300006847 Ga0075431_100277961 Ga0075431_1002779612 225
222 3300014968 Ga0157379_10305295 Ga0157379_103052952 225
223 3300045051 Ga0451576_0164855 Ga0451576_0164855_1422_2144 225
224 3300045051 Ga0451576_0375312 Ga0451576_0375312_178_864 225
225 3300046526 Ga0495666_0029570 Ga0495666_0029570_700_1410 225
226 3300050515 nmdc:mga0a205_751077_c1 nmdc:mga0a205_751077_c1_90_776 225
227 3300003187 JGI25151J46595_10027682 JGI25151J46595_100276822 227
228 3300003187 JGI25151J46595_10028659 JGI25151J46595_100286593 227
229 3300003841 Ga0055541_1005350 Ga0055541_10053502 227
230 3300009098 Ga0105245_10491098 Ga0105245_104910982 227
231 3300013102 Ga0157371_10136053 Ga0157371_101360532 227
232 3300025225 Ga0209566_100092 Ga0209566_10009215 227
233 3300025225 Ga0209566_101067 Ga0209566_1010678 227
234 3300025242 Ga0209258_104949 Ga0209258_1049492 227
235 3300025292 Ga0209676_1017950 Ga0209676_10179502 227
236 3300025294 Ga0209025_1003146 Ga0209025_10031466 227
237 3300025294 Ga0209025_1004651 Ga0209025_10046517 227
238 3300035083 Ga0373926_0037458 Ga0373926_0037458_491_1222 227
239 3300044656 Ga0466969_0011490 Ga0466969_0011490_699_1403 227
240 3300044684 Ga0466966_0053155 Ga0466966_0053155_1092_1796 227
241 3300046458 Ga0495591_045304 Ga0495591_045304_246_947 227
242 3300046520 Ga0495637_0076046 Ga0495637_0076046_530_1231 227
243 3300046665 Ga0495661_0296217 Ga0495661_0296217_10_711 227
244 3300046683 Ga0495658_0420930 Ga0495658_0420930_123_830 227
245 3300048919 Ga0496116_0028373 Ga0496116_0028373_582_1268 227
246 3300049655 Ga0501208_003791 Ga0501208_003791_423_1112 227
247 3300049661 Ga0501217_002115 Ga0501217_002115_577_1266 227
248 3300060243 Ga0587060_007048 Ga0587060_007048_93_860 227

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

42

152

0.99

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

183

259

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9868 8 123
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9851 8 123
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9834 8 123
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9823 7 123
7m0s-assembly1.cif.gz_B n-terminal domain of pmra from acinetobacter baumannii 0.9801 7 123
ID Description Score Start End Superfamily
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9873 8 82 3.40.50.2300
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9824 6 85 3.40.50.2300
af_Q2FWH6_1_124_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9786 7 123 3.40.50.2300
1nxoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9771 8 123 3.40.50.2300
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9762 7 124 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A4U0RXW1-F1-model_v4 Response regulator transcription factor 0.9927 7 122 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A536BZA9-F1-model_v4 Response regulator 0.9922 7 123 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A329KYG1-F1-model_v4 Response regulatory domain-containing protein 0.9879 7 116 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A1U7IKE4-F1-model_v4 Response regulatory domain-containing protein 0.9868 7 126 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A3B9F6K1-F1-model_v4 DNA-binding response regulator 0.9865 7 122 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Feature Viewer

pLDDT pTM Quality
88.97 0.61 Medium
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Predicted Structure (AlphaFold2)

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