F359775

General Info

Members Datasets Scaffolds Average Seq Length
248 174 240 322

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10042073|Ga0075364_100420732
Length 322
Sequence MRAVCLTTLLPVLGLGLATLEAHAEVWPSKPVRAIVPFAAGSTTDIVPRVVFDQLSLQLGQTIVVENRVGAGGTIGSGFVAKAEPDGYTLLAHGSALTISPSLYSNLSFDPRDFAAVIPLGISPSVLVVPPDRGWKSVADLVGAARAKPGALNFSSVGVGSATHLSAERFKLSTGLDAVHVPFKGGAEAMTEVIAGRIDFFFGPVGLVLPHIQEGQLRALVVNSAKRSSALPDIPTTLESGIANAEYPIWFGLFLPAKTPREIVEKLHSETLKALQSAHVRQKFAALGIDPMPMAPAEFSAHVQREIAANAALVKAAGLKAQ

Samples

Sample ID Description Type Environment
1 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
2 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
3 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
4 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
5 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
6 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
7 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
88 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
89 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
90 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
91 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
92 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
93 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
96 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
103 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
104 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
105 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
106 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
113 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
114 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
115 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
119 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
120 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
124 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
125 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
126 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
131 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
134 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
135 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
136 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
139 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
154 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
155 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
156 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
157 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
158 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
161 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
167 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
168 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
169 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
170 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
171 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
172 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
173 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
174 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.58
Metatranscriptomes 0
Isolates 2.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.27
Nodule 2.42
Rhizoplane 13.31
Rhizosphere 74.19
Stem 0
Stem Tuber 0
Unclassified 0.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25404J52841_10021115 3300003659 Bacteria 1410
2 Ga0065712_10110292 3300005290 Bacteria 1839
3 Ga0070690_100035159 3300005330 Bacteria 3143
4 Ga0070670_100211251 3300005331 Unclassified 1687
5 Ga0070689_100018577 3300005340 Bacteria 5125
6 Ga0070691_10010674 3300005341 Bacteria 4194
7 Ga0070669_100013123 3300005353 Bacteria 5888
8 Ga0070675_100085018 3300005354 Bacteria 2642
9 Ga0070675_100254593 3300005354 Bacteria 1537
10 Ga0070671_100118489 3300005355 Bacteria 2227
11 Ga0070671_100204254 3300005355 Bacteria 1676
12 Ga0070671_100366629 3300005355 Unclassified 1230
13 Ga0070674_100001448 3300005356 Bacteria 12622
14 Ga0070674_100002342 3300005356 Bacteria 10460
15 Ga0070673_100003657 3300005364 Bacteria 9626
16 Ga0070673_100167694 3300005364 Bacteria 1872
17 Ga0070688_100024679 3300005365 Bacteria 3551
18 Ga0070713_100331832 3300005436 Bacteria 1407
19 Ga0070705_100307423 3300005440 Unclassified 1139
20 Ga0070694_100125492 3300005444 Bacteria 1847
21 Ga0070708_100037689 3300005445 Bacteria 4220
22 Ga0070678_100018416 3300005456 Bacteria 4524
23 Ga0070678_100040732 3300005456 Bacteria 3289
24 Ga0070698_100094757 3300005471 Bacteria 2964
25 Ga0070672_100104427 3300005543 Bacteria 2302
26 Ga0070686_100212752 3300005544 Bacteria 1393
27 Ga0070665_100128913 3300005548 Bacteria 2532
28 Ga0068859_100134496 3300005617 Bacteria 2544
29 Ga0068859_100254338 3300005617 Unclassified 1847
30 Ga0068864_100046297 3300005618 Bacteria 3732
31 Ga0068861_100308398 3300005719 Bacteria 1374
32 Ga0068863_100068251 3300005841 Bacteria 3363
33 Ga0068860_100118913 3300005843 Bacteria 2529
34 Ga0068862_100657642 3300005844 Bacteria 1011
35 Ga0081455_10022722 3300005937 Bacteria 5853
36 Ga0081455_10056257 3300005937 Bacteria 3341
37 Ga0081540_1000078 3300005983 Bacteria 105731
38 Ga0081540_1003547 3300005983 Bacteria 12290
39 Ga0070717_10271115 3300006028 Bacteria 1503
40 Ga0070717_10295452 3300006028 Bacteria 1439
41 Ga0075365_10070519 3300006038 Bacteria 2351
42 Ga0075365_10077482 3300006038 Bacteria 2246
43 Ga0075365_10176796 3300006038 Bacteria 1491
44 Ga0075364_10042073 3300006051 Unclassified 2968
45 Ga0075364_10121808 3300006051 Bacteria 1746
46 Ga0075432_10060710 3300006058 Unclassified 1345
47 Ga0075367_10032519 3300006178 Bacteria 3002
48 Ga0075367_10092692 3300006178 Bacteria 1839
49 Ga0075366_10010765 3300006195 Bacteria 5141
50 Ga0075366_10086001 3300006195 Bacteria 1881
51 Ga0068871_100243342 3300006358 Bacteria 1565
52 Ga0075428_100027377 3300006844 Bacteria 6308
53 Ga0075428_100295718 3300006844 Bacteria 1741
54 Ga0075430_100042299 3300006846 Bacteria 3853
55 Ga0075431_100176285 3300006847 Unclassified 2196
56 Ga0075433_10004604 3300006852 Bacteria 10761
57 Ga0075433_10059045 3300006852 Bacteria 3356
58 Ga0075434_100013163 3300006871 Bacteria 7860
59 Ga0075434_100238508 3300006871 Bacteria 1838
60 Ga0075429_100081337 3300006880 Bacteria 2824
61 Ga0068865_100053789 3300006881 Bacteria 2794
62 Ga0068865_100103753 3300006881 Bacteria 2086
63 Ga0097620_100134495 3300006931 Bacteria 2544
64 Ga0097620_100254347 3300006931 Unclassified 1847
65 Ga0075435_100001818 3300007076 Bacteria 13870
66 Ga0075435_100155310 3300007076 Bacteria 1925
67 Ga0105240_10101548 3300009093 Bacteria 3498
68 Ga0111539_10111939 3300009094 Unclassified 3203
69 Ga0111539_10128550 3300009094 Bacteria 2967
70 Ga0111539_10260042 3300009094 Bacteria 2021
71 Ga0111539_10353797 3300009094 Bacteria 1709
72 Ga0114129_10384956 3300009147 Bacteria 1852
73 Ga0105241_10051672 3300009174 Bacteria 3136
74 Ga0105242_10429994 3300009176 Bacteria 1239
75 Ga0105248_10226486 3300009177 Bacteria 2104
76 Ga0105238_10457831 3300009551 Unclassified 1273
77 Ga0105249_10265159 3300009553 Bacteria 1708
78 Ga0105246_10036613 3300011119 Bacteria 3289
79 Ga0105246_10066313 3300011119 Unclassified 2527
80 Ga0105246_10239829 3300011119 Bacteria 1433
81 Ga0157375_10482060 3300013308 Bacteria 1405
82 Ga0157379_10353296 3300014968 Bacteria 1346
83 Ga0163161_10126015 3300017792 Bacteria 1928
84 Ga0207710_10095984 3300025900 Bacteria 1394
85 Ga0207688_10208238 3300025901 Bacteria 1174
86 Ga0207645_10016601 3300025907 Bacteria 4871
87 Ga0207693_10111434 3300025915 Bacteria 2146
88 Ga0207662_10048681 3300025918 Unclassified 2512
89 Ga0207662_10051803 3300025918 Bacteria 2442
90 Ga0207646_10245004 3300025922 Bacteria 1619
91 Ga0207659_10043565 3300025926 Bacteria 3152
92 Ga0207659_10215862 3300025926 Bacteria 1540
93 Ga0207700_10358301 3300025928 Bacteria 1271
94 Ga0207644_10182351 3300025931 Bacteria 1646
95 Ga0207644_10299578 3300025931 Unclassified 1295
96 Ga0207709_10085388 3300025935 Unclassified 2046
97 Ga0207669_10005367 3300025937 Bacteria 5744
98 Ga0207704_10018576 3300025938 Bacteria 3633
99 Ga0207704_10111116 3300025938 Bacteria 1853
100 Ga0207691_10003050 3300025940 Bacteria 16339
101 Ga0207691_10095560 3300025940 Bacteria 2658
102 Ga0207691_10319356 3300025940 Bacteria 1332
103 Ga0207711_10171266 3300025941 Bacteria 1970
104 Ga0207651_10041806 3300025960 Bacteria 3045
105 Ga0207678_10108398 3300026067 Bacteria 2369
106 Ga0207708_10251939 3300026075 Bacteria 1423
107 Ga0207641_10024100 3300026088 Bacteria 5016
108 Ga0207641_10185689 3300026088 Bacteria 1907
109 Ga0207676_10013185 3300026095 Bacteria 5935
110 Ga0207675_100474806 3300026118 Bacteria 1242
111 Ga0207683_10005433 3300026121 Bacteria 10916
112 Ga0207683_10063049 3300026121 Bacteria 3265
113 Ga0268266_10315881 3300028379 Bacteria 1461
114 Ga0268264_10116619 3300028381 Bacteria 2348
115 Ga0265318_10042689 3300028577 Bacteria 1720
116 Ga0307515_10230800 3300028794 Unclassified 1644
117 Ga0265330_10009949 3300031235 Bacteria 4500
118 Ga0265330_10023307 3300031235 Bacteria 2812
119 Ga0265325_10054076 3300031241 Bacteria 2056
120 Ga0265329_10005050 3300031242 Bacteria 5387
121 Ga0265329_10056497 3300031242 Bacteria 1244
122 Ga0265340_10007365 3300031247 Bacteria 5978
123 Ga0265339_10000462 3300031249 Bacteria 31680
124 Ga0265339_10022890 3300031249 Bacteria 3615
125 Ga0307408_100061249 3300031548 Bacteria 2747
126 Ga0307408_100525390 3300031548 Bacteria 1040
127 Ga0265313_10000088 3300031595 Bacteria 90711
128 Ga0265313_10006547 3300031595 Bacteria 8214
129 Ga0265313_10025278 3300031595 Bacteria 3152
130 Ga0265342_10009763 3300031712 Bacteria 6719
131 Ga0307516_10125440 3300031730 Bacteria 2353
132 Ga0307405_10023751 3300031731 Bacteria 3490
133 Ga0307412_10091158 3300031911 Bacteria 2133
134 Ga0307409_100033383 3300031995 Bacteria 3744
135 Ga0307416_100002839 3300032002 Bacteria 10084
136 Ga0307415_100003838 3300032126 Bacteria 7712
137 Ga0373958_0004018 3300034819 Bacteria 2154
138 Ga0373939_0005047 3300035114 Bacteria 3136
139 Ga0373931_0002302 3300035691 Bacteria 8442
140 Ga0373931_0039884 3300035691 Bacteria 2461
141 Ga0373927_0015866 3300035695 Bacteria 4970
142 Ga0373925_0025924 3300037068 Bacteria 4287
143 Ga0373925_0497927 3300037068 Bacteria 1000
144 Ga0395899_0109727 3300037312 Bacteria 1985
145 Ga0395900_0009131 3300037418 Bacteria 10156
146 Ga0395905_0016133 3300037471 Bacteria 7101
147 Ga0395901_0009974 3300038443 Bacteria 9627
148 Ga0439443_003603 3300042003 Bacteria 1967
149 Ga0439460_0004851 3300042461 Bacteria 3287
150 Ga0466963_0325723 3300044694 Bacteria 1081
151 Ga0466957_0105402 3300044842 Bacteria 1782
152 Ga0451576_0438410 3300045051 Bacteria 1371
153 Ga0466967_0016103 3300045976 Bacteria 5884
154 Ga0495603_0053579 3300046455 Bacteria 2393
155 Ga0495638_0041893 3300046460 Bacteria 2894
156 Ga0495584_0010208 3300046491 Bacteria 4823
157 Ga0495584_0051090 3300046491 Unclassified 2082
158 Ga0495628_0179810 3300046516 Bacteria 1600
159 Ga0495648_0011362 3300046524 Bacteria 6710
160 Ga0495598_0002875 3300046537 Bacteria 3600
161 Ga0495621_0017808 3300046539 Bacteria 2301
162 Ga0495656_0069287 3300046615 Bacteria 1562
163 Ga0495599_0056505 3300046678 Bacteria 2456
164 Ga0495674_0265334 3300047319 Bacteria 1410
165 Ga0495676_0109666 3300047321 Bacteria 2028
166 Ga0495602_0208607 3300048088 Bacteria 1485
167 Ga0496100_0009991 3300048903 Bacteria 5357
168 Ga0496101_0248465 3300048904 Bacteria 1385
169 Ga0496104_0001076 3300048907 Bacteria 23319
170 Ga0496104_0001993 3300048907 Bacteria 17717
171 Ga0496105_0010118 3300048908 Bacteria 7407
172 Ga0496105_0016459 3300048908 Bacteria 5905
173 Ga0496105_0062317 3300048908 Bacteria 3078
174 Ga0496106_0020780 3300048909 Bacteria 4872
175 Ga0496106_0169939 3300048909 Bacteria 1728
176 Ga0496106_0178910 3300048909 Bacteria 1683
177 Ga0496107_0034273 3300048910 Bacteria 3636
178 Ga0496107_0420647 3300048910 Bacteria 993
179 Ga0496108_0019919 3300048911 Bacteria 5510
180 Ga0496108_0325548 3300048911 Bacteria 1340
181 Ga0496108_0357992 3300048911 Bacteria 1273
182 Ga0496109_0111702 3300048912 Bacteria 2541
183 Ga0496109_0256677 3300048912 Bacteria 1646
184 Ga0496109_0272442 3300048912 Bacteria 1595
185 Ga0496110_0102741 3300048913 Bacteria 2563
186 Ga0496111_0036208 3300048914 Bacteria 3528
187 Ga0496112_0044129 3300048915 Bacteria 4367
188 Ga0496112_0151392 3300048915 Bacteria 2287
189 Ga0496112_0269697 3300048915 Bacteria 1650
190 Ga0496112_0497258 3300048915 Bacteria 1155
191 Ga0496113_0043183 3300048916 Bacteria 3335
192 Ga0496113_0175028 3300048916 Bacteria 1700
193 Ga0496114_0020492 3300048917 Bacteria 5366
194 Ga0496114_0115621 3300048917 Bacteria 2302
195 Ga0496114_0188473 3300048917 Bacteria 1804
196 Ga0496115_0019281 3300048918 Bacteria 5249
197 Ga0496115_0034709 3300048918 Bacteria 3986
198 Ga0496115_0081868 3300048918 Bacteria 2629
199 Ga0496115_0145850 3300048918 Bacteria 1953
200 Ga0501036_0175572 3300049572 Bacteria 1804
201 Ga0501042_0052762 3300049578 Bacteria 2901
202 Ga0501042_0160375 3300049578 Bacteria 1623
203 Ga0501046_0203030 3300049580 Bacteria 1474
204 Ga0501048_0157361 3300049582 Bacteria 1607
205 Ga0501048_0209525 3300049582 Bacteria 1382
206 Ga0501075_0118078 3300049591 Bacteria 2017
207 Ga0501076_0073590 3300049592 Bacteria 2736
208 Ga0501076_0081340 3300049592 Bacteria 2601
209 Ga0501079_0061852 3300049741 Bacteria 2888
210 Ga0501081_0170909 3300049743 Bacteria 1569
211 Ga0501045_0117286 3300049824 Bacteria 1976
212 nmdc:mga03683_41188_c1 3300050489 Bacteria 1897
213 nmdc:mga03n38_54264_c1 3300050490 Bacteria 1801
214 nmdc:mga00v17_35676_c1 3300050491 Bacteria 2962
215 nmdc:mga00v17_92866_c1 3300050491 Bacteria 1897
216 nmdc:mga0yw44_58648_c1 3300050492 Bacteria 2352
217 nmdc:mga0k408_14076_c1 3300050493 Bacteria 4399
218 nmdc:mga07m45_81686_c1 3300050496 Bacteria 1845
219 nmdc:mga05p37_320512_c1 3300050507 Bacteria 1835
220 nmdc:mga09592_116660_c1 3300050508 Bacteria 2291
221 nmdc:mga09592_50002_c1 3300050508 Bacteria 3526
222 nmdc:mga0qj67_38253_c1 3300050509 Bacteria 3763
223 nmdc:mga0qj67_5704_c1 3300050509 Bacteria 9108
224 nmdc:mga06r32_12788_c1 3300050510 Bacteria 7588
225 nmdc:mga06r32_165227_c1 3300050510 Unclassified 2196
226 nmdc:mga06r32_221686_c1 3300050510 Bacteria 1879
227 nmdc:mga0rr50_10578_c1 3300050513 Bacteria 5863
228 nmdc:mga0rr50_224439_c1 3300050513 Bacteria 1552
229 nmdc:mga08x19_20363_c1 3300050514 Bacteria 4084
230 nmdc:mga0a205_46040_c1 3300050515 Bacteria 4207
231 nmdc:mga0sz30_8117_c1 3300050516 Bacteria 3954
232 Ga0500610_0113986 3300053079 Bacteria 1387
233 Ga0495595_0083875 3300053084 Bacteria 1522
234 Ga0500651_0173296 3300053093 Bacteria 1285
235 Ga0500641_0017645 3300053096 Bacteria 2673
236 Ga0500604_0038494 3300053151 Bacteria 1435
237 Ga0501084_0123462 3300054114 Bacteria 2178
238 Ga0501082_0047420 3300060353 Bacteria 3703
239 Ga0530510_0079301 3300061734 Bacteria 2388
240 Ga0530510_0210589 3300061734 Bacteria 1444

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053079 Ga0500610_0113986 Ga0500610_0113986_501_1373 290
2 3300045051 Ga0451576_0438410 Ga0451576_0438410_34_909 291
3 3300048910 Ga0496107_0420647 Ga0496107_0420647_20_898 292
4 3300049741 Ga0501079_0061852 Ga0501079_0061852_1548_2453 297
5 3300049582 Ga0501048_0209525 Ga0501048_0209525_20_937 305
6 3300050493 nmdc:mga0k408_14076_c1 nmdc:mga0k408_14076_c1_983_1906 305
7 3300026075 Ga0207708_10251939 Ga0207708_102519392 306
8 3300037068 Ga0373925_0497927 Ga0373925_0497927_48_968 306
9 3300046537 Ga0495598_0002875 Ga0495598_0002875_1249_2172 306
10 3300046615 Ga0495656_0069287 Ga0495656_0069287_537_1460 306
11 3300031241 Ga0265325_10054076 Ga0265325_100540762 307
12 3300031249 Ga0265339_10000462 Ga0265339_1000046227 307
13 3300031595 Ga0265313_10000088 Ga0265313_1000008824 307
14 3300009094 Ga0111539_10128550 Ga0111539_101285503 310
15 3300050496 nmdc:mga07m45_81686_c1 nmdc:mga07m45_81686_c1_806_1750 311
16 3300014968 Ga0157379_10353296 Ga0157379_103532962 312
17 3300048904 Ga0496101_0248465 Ga0496101_0248465_28_978 313
18 3300049592 Ga0501076_0081340 Ga0501076_0081340_620_1561 313
19 iso_pu_bacteria 2922386360 2922387834 313
20 3300005844 Ga0068862_100657642 Ga0068862_1006576421 314
21 3300009176 Ga0105242_10429994 Ga0105242_104299941 314
22 3300050515 nmdc:mga0a205_46040_c1 nmdc:mga0a205_46040_c1_641_1591 314
23 iso_pu_bacteria 2874590934 2874591337 314
24 iso_pu_bacteria 2874645413 2874646047 314
25 iso_pu_bacteria 2876771140 2876771443 314
26 iso_pu_bacteria 2876818435 2876818752 314
27 iso_pu_bacteria 2879074833 2879075229 314
28 3300044694 Ga0466963_0325723 Ga0466963_0325723_62_1015 315
29 3300044842 Ga0466957_0105402 Ga0466957_0105402_464_1417 315
30 3300045976 Ga0466967_0016103 Ga0466967_0016103_3596_4549 315
31 3300046455 Ga0495603_0053579 Ga0495603_0053579_704_1666 315
32 3300005440 Ga0070705_100307423 Ga0070705_1003074231 316
33 3300005445 Ga0070708_100037689 Ga0070708_1000376892 316
34 3300006028 Ga0070717_10271115 Ga0070717_102711151 316
35 3300006852 Ga0075433_10059045 Ga0075433_100590453 316
36 3300006871 Ga0075434_100238508 Ga0075434_1002385082 316
37 3300007076 Ga0075435_100001818 Ga0075435_1000018183 316
38 3300009093 Ga0105240_10101548 Ga0105240_101015483 316
39 3300009147 Ga0114129_10384956 Ga0114129_103849562 316
40 3300025915 Ga0207693_10111434 Ga0207693_101114342 316
41 3300025922 Ga0207646_10245004 Ga0207646_102450041 316
42 3300025928 Ga0207700_10358301 Ga0207700_103583011 316
43 3300037312 Ga0395899_0109727 Ga0395899_0109727_333_1298 316
44 3300037418 Ga0395900_0009131 Ga0395900_0009131_2018_2983 316
45 3300037471 Ga0395905_0016133 Ga0395905_0016133_4793_5758 316
46 3300038443 Ga0395901_0009974 Ga0395901_0009974_53_1018 316
47 3300050513 nmdc:mga0rr50_10578_c1 nmdc:mga0rr50_10578_c1_2056_3012 316
48 3300005290 Ga0065712_10110292 Ga0065712_101102922 317
49 3300005331 Ga0070670_100211251 Ga0070670_1002112512 317
50 3300005355 Ga0070671_100118489 Ga0070671_1001184892 317
51 3300005355 Ga0070671_100366629 Ga0070671_1003666292 317
52 3300005364 Ga0070673_100003657 Ga0070673_1000036577 317
53 3300006038 Ga0075365_10070519 Ga0075365_100705192 317
54 3300006051 Ga0075364_10042073 Ga0075364_100420732 317
55 3300006178 Ga0075367_10032519 Ga0075367_100325193 317
56 3300009094 Ga0111539_10260042 Ga0111539_102600422 317
57 3300009094 Ga0111539_10353797 Ga0111539_103537972 317
58 3300009174 Ga0105241_10051672 Ga0105241_100516721 317
59 3300009551 Ga0105238_10457831 Ga0105238_104578312 317
60 3300011119 Ga0105246_10036613 Ga0105246_100366134 317
61 3300011119 Ga0105246_10066313 Ga0105246_100663132 317
62 3300011119 Ga0105246_10239829 Ga0105246_102398292 317
63 3300013308 Ga0157375_10482060 Ga0157375_104820602 317
64 3300025918 Ga0207662_10048681 Ga0207662_100486812 317
65 3300025926 Ga0207659_10215862 Ga0207659_102158622 317
66 3300025931 Ga0207644_10299578 Ga0207644_102995782 317
67 3300025935 Ga0207709_10085388 Ga0207709_100853882 317
68 3300025940 Ga0207691_10319356 Ga0207691_103193562 317
69 3300026088 Ga0207641_10185689 Ga0207641_101856892 317
70 3300031730 Ga0307516_10125440 Ga0307516_101254402 317
71 3300046524 Ga0495648_0011362 Ga0495648_0011362_4929_5894 317
72 3300048917 Ga0496114_0188473 Ga0496114_0188473_769_1734 317
73 3300050491 nmdc:mga00v17_92866_c1 nmdc:mga00v17_92866_c1_556_1524 317
74 3300050492 nmdc:mga0yw44_58648_c1 nmdc:mga0yw44_58648_c1_167_1132 317
75 3300050510 nmdc:mga06r32_221686_c1 nmdc:mga06r32_221686_c1_428_1396 317
76 3300005341 Ga0070691_10010674 Ga0070691_100106746 318
77 3300005436 Ga0070713_100331832 Ga0070713_1003318321 318
78 3300005444 Ga0070694_100125492 Ga0070694_1001254921 318
79 3300005456 Ga0070678_100040732 Ga0070678_1000407323 318
80 3300005471 Ga0070698_100094757 Ga0070698_1000947572 318
81 3300005617 Ga0068859_100254338 Ga0068859_1002543381 318
82 3300005937 Ga0081455_10022722 Ga0081455_100227222 318
83 3300005937 Ga0081455_10056257 Ga0081455_100562574 318
84 3300005983 Ga0081540_1003547 Ga0081540_10035472 318
85 3300006058 Ga0075432_10060710 Ga0075432_100607102 318
86 3300006358 Ga0068871_100243342 Ga0068871_1002433421 318
87 3300006844 Ga0075428_100027377 Ga0075428_1000273777 318
88 3300006844 Ga0075428_100295718 Ga0075428_1002957182 318
89 3300006846 Ga0075430_100042299 Ga0075430_1000422993 318
90 3300006847 Ga0075431_100176285 Ga0075431_1001762852 318
91 3300006852 Ga0075433_10004604 Ga0075433_100046048 318
92 3300006871 Ga0075434_100013163 Ga0075434_1000131632 318
93 3300006880 Ga0075429_100081337 Ga0075429_1000813374 318
94 3300006881 Ga0068865_100103753 Ga0068865_1001037531 318
95 3300006931 Ga0097620_100254347 Ga0097620_1002543471 318
96 3300007076 Ga0075435_100155310 Ga0075435_1001553101 318
97 3300009094 Ga0111539_10111939 Ga0111539_101119393 318
98 3300017792 Ga0163161_10126015 Ga0163161_101260152 318
99 3300025938 Ga0207704_10111116 Ga0207704_101111161 318
100 3300028794 Ga0307515_10230800 Ga0307515_102308001 318
101 3300031235 Ga0265330_10009949 Ga0265330_100099492 318
102 3300031242 Ga0265329_10005050 Ga0265329_100050502 318
103 3300031548 Ga0307408_100061249 Ga0307408_1000612492 318
104 3300031548 Ga0307408_100525390 Ga0307408_1005253901 318
105 3300031595 Ga0265313_10006547 Ga0265313_100065473 318
106 3300031712 Ga0265342_10009763 Ga0265342_100097637 318
107 3300031731 Ga0307405_10023751 Ga0307405_100237512 318
108 3300031911 Ga0307412_10091158 Ga0307412_100911582 318
109 3300031995 Ga0307409_100033383 Ga0307409_1000333832 318
110 3300032002 Ga0307416_100002839 Ga0307416_1000028393 318
111 3300032126 Ga0307415_100003838 Ga0307415_1000038386 318
112 3300042003 Ga0439443_003603 Ga0439443_003603_622_1590 318
113 3300042461 Ga0439460_0004851 Ga0439460_0004851_1215_2183 318
114 3300046491 Ga0495584_0051090 Ga0495584_0051090_46_1014 318
115 3300046678 Ga0495599_0056505 Ga0495599_0056505_1272_2240 318
116 3300048907 Ga0496104_0001993 Ga0496104_0001993_10863_11831 318
117 3300048908 Ga0496105_0010118 Ga0496105_0010118_5390_6358 318
118 3300048915 Ga0496112_0151392 Ga0496112_0151392_48_1016 318
119 3300048918 Ga0496115_0019281 Ga0496115_0019281_2423_3391 318
120 3300049572 Ga0501036_0175572 Ga0501036_0175572_469_1437 318
121 3300049578 Ga0501042_0052762 Ga0501042_0052762_667_1635 318
122 3300049578 Ga0501042_0160375 Ga0501042_0160375_277_1245 318
123 3300049580 Ga0501046_0203030 Ga0501046_0203030_297_1265 318
124 3300049582 Ga0501048_0157361 Ga0501048_0157361_102_1070 318
125 3300049591 Ga0501075_0118078 Ga0501075_0118078_640_1608 318
126 3300049743 Ga0501081_0170909 Ga0501081_0170909_222_1190 318
127 3300049824 Ga0501045_0117286 Ga0501045_0117286_397_1365 318
128 3300050508 nmdc:mga09592_116660_c1 nmdc:mga09592_116660_c1_607_1575 318
129 3300050509 nmdc:mga0qj67_38253_c1 nmdc:mga0qj67_38253_c1_139_1107 318
130 3300050510 nmdc:mga06r32_165227_c1 nmdc:mga06r32_165227_c1_518_1486 318
131 3300050513 nmdc:mga0rr50_224439_c1 nmdc:mga0rr50_224439_c1_92_1081 318
132 3300050514 nmdc:mga08x19_20363_c1 nmdc:mga08x19_20363_c1_1891_2880 318
133 3300053151 Ga0500604_0038494 Ga0500604_0038494_103_1131 318
134 3300061734 Ga0530510_0079301 Ga0530510_0079301_538_1506 318
135 3300005354 Ga0070675_100085018 Ga0070675_1000850182 319
136 3300005354 Ga0070675_100254593 Ga0070675_1002545932 319
137 3300005356 Ga0070674_100002342 Ga0070674_1000023426 319
138 3300005364 Ga0070673_100167694 Ga0070673_1001676943 319
139 3300005456 Ga0070678_100018416 Ga0070678_1000184163 319
140 3300005543 Ga0070672_100104427 Ga0070672_1001044273 319
141 3300005544 Ga0070686_100212752 Ga0070686_1002127522 319
142 3300005548 Ga0070665_100128913 Ga0070665_1001289132 319
143 3300005617 Ga0068859_100134496 Ga0068859_1001344962 319
144 3300005841 Ga0068863_100068251 Ga0068863_1000682512 319
145 3300006931 Ga0097620_100134495 Ga0097620_1001344952 319
146 3300009177 Ga0105248_10226486 Ga0105248_102264863 319
147 3300025900 Ga0207710_10095984 Ga0207710_100959842 319
148 3300025926 Ga0207659_10043565 Ga0207659_100435653 319
149 3300025937 Ga0207669_10005367 Ga0207669_100053672 319
150 3300025940 Ga0207691_10003050 Ga0207691_1000305011 319
151 3300025941 Ga0207711_10171266 Ga0207711_101712662 319
152 3300025960 Ga0207651_10041806 Ga0207651_100418062 319
153 3300026088 Ga0207641_10024100 Ga0207641_100241003 319
154 3300026121 Ga0207683_10005433 Ga0207683_100054335 319
155 3300028379 Ga0268266_10315881 Ga0268266_103158812 319
156 3300028577 Ga0265318_10042689 Ga0265318_100426891 319
157 3300031235 Ga0265330_10023307 Ga0265330_100233071 319
158 3300031242 Ga0265329_10056497 Ga0265329_100564971 319
159 3300031247 Ga0265340_10007365 Ga0265340_100073652 319
160 3300031249 Ga0265339_10022890 Ga0265339_100228904 319
161 3300031595 Ga0265313_10025278 Ga0265313_100252782 319
162 3300046460 Ga0495638_0041893 Ga0495638_0041893_1019_1981 319
163 3300046516 Ga0495628_0179810 Ga0495628_0179810_167_1186 319
164 3300046539 Ga0495621_0017808 Ga0495621_0017808_331_1293 319
165 3300047321 Ga0495676_0109666 Ga0495676_0109666_175_1137 319
166 3300048908 Ga0496105_0016459 Ga0496105_0016459_2639_3634 319
167 3300048909 Ga0496106_0169939 Ga0496106_0169939_537_1532 319
168 3300048911 Ga0496108_0357992 Ga0496108_0357992_186_1181 319
169 3300048915 Ga0496112_0497258 Ga0496112_0497258_151_1110 319
170 3300048916 Ga0496113_0043183 Ga0496113_0043183_356_1384 319
171 3300048918 Ga0496115_0034709 Ga0496115_0034709_2265_3260 319
172 3300049592 Ga0501076_0073590 Ga0501076_0073590_1591_2577 319
173 3300050507 nmdc:mga05p37_320512_c1 nmdc:mga05p37_320512_c1_431_1450 319
174 3300050508 nmdc:mga09592_50002_c1 nmdc:mga09592_50002_c1_1707_2726 319
175 3300050509 nmdc:mga0qj67_5704_c1 nmdc:mga0qj67_5704_c1_428_1447 319
176 3300050510 nmdc:mga06r32_12788_c1 nmdc:mga06r32_12788_c1_4744_5763 319
177 3300053093 Ga0500651_0173296 Ga0500651_0173296_22_984 319
178 3300054114 Ga0501084_0123462 Ga0501084_0123462_657_1643 319
179 3300060353 Ga0501082_0047420 Ga0501082_0047420_264_1250 319
180 3300061734 Ga0530510_0210589 Ga0530510_0210589_207_1193 319
181 3300005330 Ga0070690_100035159 Ga0070690_1000351592 320
182 3300005340 Ga0070689_100018577 Ga0070689_1000185772 320
183 3300005353 Ga0070669_100013123 Ga0070669_1000131232 320
184 3300005355 Ga0070671_100204254 Ga0070671_1002042542 320
185 3300005356 Ga0070674_100001448 Ga0070674_1000014482 320
186 3300005365 Ga0070688_100024679 Ga0070688_1000246792 320
187 3300005618 Ga0068864_100046297 Ga0068864_1000462972 320
188 3300005719 Ga0068861_100308398 Ga0068861_1003083982 320
189 3300005843 Ga0068860_100118913 Ga0068860_1001189132 320
190 3300006028 Ga0070717_10295452 Ga0070717_102954522 320
191 3300006038 Ga0075365_10077482 Ga0075365_100774822 320
192 3300006038 Ga0075365_10176796 Ga0075365_101767962 320
193 3300006051 Ga0075364_10121808 Ga0075364_101218081 320
194 3300006178 Ga0075367_10092692 Ga0075367_100926922 320
195 3300006195 Ga0075366_10010765 Ga0075366_100107655 320
196 3300006195 Ga0075366_10086001 Ga0075366_100860012 320
197 3300006881 Ga0068865_100053789 Ga0068865_1000537892 320
198 3300009553 Ga0105249_10265159 Ga0105249_102651592 320
199 3300025901 Ga0207688_10208238 Ga0207688_102082381 320
200 3300025907 Ga0207645_10016601 Ga0207645_100166012 320
201 3300025918 Ga0207662_10051803 Ga0207662_100518032 320
202 3300025931 Ga0207644_10182351 Ga0207644_101823512 320
203 3300025938 Ga0207704_10018576 Ga0207704_100185762 320
204 3300025940 Ga0207691_10095560 Ga0207691_100955603 320
205 3300026067 Ga0207678_10108398 Ga0207678_101083982 320
206 3300026095 Ga0207676_10013185 Ga0207676_100131852 320
207 3300026118 Ga0207675_100474806 Ga0207675_1004748062 320
208 3300026121 Ga0207683_10063049 Ga0207683_100630493 320
209 3300028381 Ga0268264_10116619 Ga0268264_101166192 320
210 3300034819 Ga0373958_0004018 Ga0373958_0004018_906_1868 320
211 3300035114 Ga0373939_0005047 Ga0373939_0005047_1167_2129 320
212 3300035691 Ga0373931_0002302 Ga0373931_0002302_5459_6421 320
213 3300035691 Ga0373931_0039884 Ga0373931_0039884_1425_2387 320
214 3300035695 Ga0373927_0015866 Ga0373927_0015866_423_1403 320
215 3300037068 Ga0373925_0025924 Ga0373925_0025924_2310_3290 320
216 3300046491 Ga0495584_0010208 Ga0495584_0010208_2720_3688 320
217 3300047319 Ga0495674_0265334 Ga0495674_0265334_229_1191 320
218 3300048088 Ga0495602_0208607 Ga0495602_0208607_70_1032 320
219 3300048903 Ga0496100_0009991 Ga0496100_0009991_63_1025 320
220 3300048909 Ga0496106_0020780 Ga0496106_0020780_3232_4194 320
221 3300048910 Ga0496107_0034273 Ga0496107_0034273_236_1198 320
222 3300048911 Ga0496108_0019919 Ga0496108_0019919_335_1297 320
223 3300048911 Ga0496108_0325548 Ga0496108_0325548_154_1116 320
224 3300048912 Ga0496109_0111702 Ga0496109_0111702_552_1514 320
225 3300048913 Ga0496110_0102741 Ga0496110_0102741_922_1884 320
226 3300048914 Ga0496111_0036208 Ga0496111_0036208_127_1089 320
227 3300048915 Ga0496112_0044129 Ga0496112_0044129_1304_2266 320
228 3300048915 Ga0496112_0269697 Ga0496112_0269697_328_1290 320
229 3300048916 Ga0496113_0175028 Ga0496113_0175028_13_975 320
230 3300048917 Ga0496114_0020492 Ga0496114_0020492_237_1199 320
231 3300048918 Ga0496115_0081868 Ga0496115_0081868_1619_2581 320
232 3300048918 Ga0496115_0145850 Ga0496115_0145850_620_1582 320
233 3300050489 nmdc:mga03683_41188_c1 nmdc:mga03683_41188_c1_561_1526 320
234 3300050490 nmdc:mga03n38_54264_c1 nmdc:mga03n38_54264_c1_500_1474 320
235 3300050491 nmdc:mga00v17_35676_c1 nmdc:mga00v17_35676_c1_1524_2489 320
236 3300050491 nmdc:mga00v17_35676_c1 nmdc:mga00v17_35676_c1_467_1441 320
237 3300050516 nmdc:mga0sz30_8117_c1 nmdc:mga0sz30_8117_c1_1214_2179 320
238 3300050516 nmdc:mga0sz30_8117_c1 nmdc:mga0sz30_8117_c1_157_1131 320
239 3300053084 Ga0495595_0083875 Ga0495595_0083875_194_1156 320
240 3300053096 Ga0500641_0017645 Ga0500641_0017645_1562_2524 320
241 3300048912 Ga0496109_0272442 Ga0496109_0272442_347_1321 321
242 3300048907 Ga0496104_0001076 Ga0496104_0001076_18760_19758 322
243 3300048908 Ga0496105_0062317 Ga0496105_0062317_975_1973 322
244 3300048909 Ga0496106_0178910 Ga0496106_0178910_379_1377 322
245 3300048912 Ga0496109_0256677 Ga0496109_0256677_595_1593 322
246 3300048917 Ga0496114_0115621 Ga0496114_0115621_791_1789 322
247 3300003659 JGI25404J52841_10021115 JGI25404J52841_100211152 323
248 3300005983 Ga0081540_1000078 Ga0081540_100007889 323

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

47

319

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9716 27 322
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9683 27 322
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.9665 26 322
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.9633 26 322
8hk9-assembly2.cif.gz_A apo-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis 0.9515 29 319
ID Description Score Start End Superfamily
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.953 125 242 3.40.190.10
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.945 26 322 3.40.190.150
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9381 26 322 3.40.190.150
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9368 125 246 3.40.190.10
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9344 26 322 3.40.190.150
ID Description Score Start End GO Terms
AF-H1RZT7-F1-model_v4 Extra-cytoplasmic solute receptor 0.9795 48 322
AF-A0A4V2HUY2-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9772 89 322
AF-A0A0Q4Y6X1-F1-model_v4 ABC transporter substrate-binding protein 0.9766 52 322
AF-A0A536SS29-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9741 34 322
AF-H0A2I4-F1-model_v4 Tat pathway signal sequence domain protein 0.9731 25 322

Feature Viewer

pLDDT pTM Quality
92.18 0.86 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map