F359464

General Info

Members Datasets Scaffolds Average Seq Length
247 215 494 759

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2818991468|2819724390
Length 826
Sequence QIHQPGYQPLYHIKPPTVDRRCRKSVSNTHALFRTHILSFKPDIYLINLIMSVNVFLYLEEELELTIVKTSNLGFPRIGLNREWKKALESYWKGQTDRETLLSTLDEQFLTAIKTQIDQQIDIVPSGDFTFYDHVLDTAVMFNWIPERFRSLKDPLDTYFAMARGTKDAVSSEMTKWFNTNYHYIVPEYEKSTEFKLTHNKPLEAYEKVKKAFGVETKPVVLGLYTFVSLSKGYEANEVKEIQQRLVPLYTQLLKELEEAGVKWVQIDEPALVTASSEDVKSVKEIYETIKEAVPGLNILLQTYFDSVDAYEELVTYPVEAIGLDFVHDQGRNLDQVKKHGFPKDKILAAGVIDGRNIWRSDLGERLSFISEVIADVQPKEVWLQPSSSLLHVPVAKHPSEQLEEKLLNGLSYATEKLAELTLLKEGLTKGAAAIDADINEAAQALLTLKEFAKGTNADLTAERNNLSSKDFKRPVAFEERLRIQNESLELPLLPTTTIGSFPQSAEVRSARQKWRKNEWTDAEYDEFIKKETKRWIDIQEEIGLDVLVHGEFERTDMVEYFGEKLAGFAFTKFAWVQSYGSRCVKPPIIYGDVEFTEPMTVKETVYAQSLTEKKVKGMLTGPVTILNWSFPRTDISRKDIAFQIAFALRKEVEALEAAGIQVIQVDEPALREGLPLKESDWAEYLNWAAESFRLSTSSVQNDTQIHTHMCYSNFEDIVDTIEDLDADVITIEHSRSHGGFLDYLEKHPYLKGLGLGVYDIHSPRVPSVEEMSEIIDDALNVCPTDRFWVNPDCGLKTRQEPETIAALKNMVTAAEVARKKLAQHA

Samples

Sample ID Description Type Environment
1 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
6 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
7 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
8 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
9 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
10 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
11 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
12 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
15 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
16 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
17 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
18 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
19 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
20 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
21 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
22 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
23 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
24 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
25 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
31 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
32 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
33 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
34 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
35 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
36 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
37 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
38 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
39 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
40 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
41 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
42 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
43 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
44 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
45 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
46 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
47 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
48 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
49 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
50 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
51 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
52 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
53 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
54 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
55 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
56 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
57 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
59 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
60 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
61 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
62 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
63 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
64 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
65 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
66 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
67 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
68 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
69 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
70 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
71 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
72 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
73 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
74 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
75 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
76 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
77 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
78 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
79 2554235283 Bacillus safensis VK Isolate Rhizosphere
80 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
81 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
82 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
83 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
84 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
85 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
86 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
87 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
88 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
89 2643221729 Bacillus sp. Root11 Isolate Unclassified
90 2643221730 Bacillus sp. Root131 Isolate Unclassified
91 2643221731 Bacillus sp. Root147 Isolate Unclassified
92 2643221735 Bacillus sp. Root920 Isolate Unclassified
93 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
94 2671180694 Paenibacillus sp. A3 Isolate Unclassified
95 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
96 2684622632 Bacillus cereus 905 Isolate Unclassified
97 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
98 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
99 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
100 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
101 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
102 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
103 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
104 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
105 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
106 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
107 2738541295 Bacillus sp. OK085 Isolate Unclassified
108 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
109 2738541358 Bacillus sp. OV752 Isolate Unclassified
110 2738543006 Bacillus sp. OK077 Isolate Unclassified
111 2738543010 Bacillus sp. YR335 Isolate Unclassified
112 2738543017 Bacillus sp. OV186 Isolate Unclassified
113 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
114 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
115 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
116 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
117 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
118 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
119 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
120 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
121 2811994870 Bacillus sp. JB4 Isolate Unclassified
122 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
123 2818991441 Niallia circulans 3243 Isolate Rhizosphere
124 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
125 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
126 2818991459 Paenibacillus sp. 597 Isolate Unclassified
127 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
128 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
129 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
130 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
131 2857472729 Cohnella sp. R-74144 Isolate Unclassified
132 2857586860 Bacillus sp. R-71935 Isolate Unclassified
133 2858438669 Leuconostoc mesenteroides YL48 Isolate Unclassified
134 2860837431 Bacillus sp. WR11 Isolate Unclassified
135 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
136 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
137 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
138 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
139 2881633906 Lactiplantibacillus garii FI11369 Isolate Unclassified
140 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
141 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
142 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
143 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
144 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
145 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
146 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
147 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
148 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
149 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
150 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
151 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
152 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
153 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
154 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
155 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
156 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
157 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
158 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
159 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
160 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
161 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
162 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
163 2919726948 Bacillus pumilus 4489 Isolate Unclassified
164 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
165 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
166 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
167 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
168 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
169 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
170 2938917290 Bacillus sp. CR71 Isolate Unclassified
171 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
172 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
173 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
174 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
175 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
176 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
177 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
178 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
179 2965761152 Bacillus sp. COPE52 Isolate Unclassified
180 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
181 2969141011 Bacillus velezensis MH25 Isolate Unclassified
182 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
183 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
184 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
185 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
186 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
187 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
188 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
189 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
190 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
191 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
192 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
193 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
194 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
195 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
196 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
197 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
198 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
199 8022653035 Bacillus sp. Rc4 Isolate Unclassified
200 8022792930 Bacillus sp. Xin Isolate Rhizosphere
201 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
202 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
203 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
204 8023438354 Bacillus sp. BH2 Isolate Unclassified
205 8023444577 Bacillus sp. BH32 Isolate Unclassified
206 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
207 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
208 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
209 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
210 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
211 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
212 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
213 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere
214 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere
215 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 37.25
Metatranscriptomes 2.83
Isolates 59.92

Biome Distribution

Category Percentage (%)
Aerial Root 0.81
Bulb 0
Endosphere 15.38
Nodule 0.81
Rhizoplane 1.21
Rhizosphere 45.75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1008358 3300002987 Bacteria 2850
2 JGI25151J46595_10000020 3300003187 Bacteria 233547
3 JGI25151J46595_10000840 3300003187 Bacteria 24487
4 JGI25151J46595_10001268 3300003187 Bacteria 17832
5 JGI25151J46595_10004608 3300003187 Bacteria 7258
6 JGI25151J46595_10019981 3300003187 Bacteria 2833
7 JGI25151J46595_10022226 3300003187 Bacteria 2637
8 rootH2_10037630 3300003320 Bacteria 8201
9 Ga0006562J51391_1001255 3300003578 Bacteria 5600
10 Ga0006562J51391_1011627 3300003578 Bacteria 2884
11 Ga0055538_1000225 3300003751 Bacteria 31843
12 Ga0055532_1000071 3300003758 Bacteria 133457
13 Ga0068867_100000064 3300005459 Bacteria 64233
14 Ga0070664_100001816 3300005564 Bacteria 17110
15 Ga0075428_100017333 3300006844 Bacteria 7960
16 Ga0105244_10001663 3300009036 Bacteria 17572
17 Ga0105250_10001193 3300009092 Bacteria 14517
18 Ga0111539_10058701 3300009094 Bacteria 4564
19 Ga0114129_10030996 3300009147 Bacteria 7563
20 Ga0105243_10000088 3300009148 Bacteria 103915
21 Ga0105246_10007560 3300011119 Bacteria 6668
22 Ga0206356_10379324 3300020070 Eukaryota 3194
23 Ga0209784_100098 3300025224 Bacteria 103150
24 Ga0209566_100076 3300025225 Bacteria 161921
25 Ga0209147_100010 3300025229 Bacteria 741391
26 Ga0209147_100086 3300025229 Bacteria 182078
27 Ga0209147_100212 3300025229 Bacteria 62064
28 Ga0209147_102016 3300025229 Bacteria 5855
29 Ga0209437_100249 3300025233 Bacteria 85649
30 Ga0209130_1000353 3300025284 Bacteria 52547
31 Ga0209675_1007699 3300025291 Bacteria 4080
32 Ga0209676_1001484 3300025292 Bacteria 21672
33 Ga0209025_1000001 3300025294 Bacteria 1888151
34 Ga0209025_1000127 3300025294 Bacteria 200766
35 Ga0209025_1000158 3300025294 Bacteria 168481
36 Ga0209025_1000302 3300025294 Bacteria 110301
37 Ga0209025_1000751 3300025294 Bacteria 54338
38 Ga0209025_1000798 3300025294 Bacteria 51126
39 Ga0209025_1004009 3300025294 Bacteria 13198
40 Ga0209025_1004707 3300025294 Bacteria 11651
41 Ga0209025_1007485 3300025294 Bacteria 8121
42 Ga0209025_1007855 3300025294 Bacteria 7830
43 Ga0209025_1015325 3300025294 Bacteria 4633
44 Ga0209025_1022680 3300025294 Bacteria 3316
45 Ga0207696_1000504 3300025711 Bacteria 32633
46 Ga0207696_1004968 3300025711 Bacteria 5609
47 Ga0207655_1000590 3300025728 Bacteria 44740
48 Ga0207649_10006373 3300025920 Bacteria 6411
49 Ga0207709_10000270 3300025935 Bacteria 61008
50 Ga0207648_10000192 3300026089 Bacteria 64301
51 Ga0237817_10051 3300030083 Bacteria 40212
52 Ga0237817_10058 3300030083 Bacteria 38103
53 Ga0265327_10000369 3300031251 Bacteria 85139
54 Ga0307408_100000021 3300031548 Bacteria 312158
55 Ga0307408_100001048 3300031548 Bacteria 21241
56 Ga0307407_10000058 3300031903 Bacteria 48922
57 Ga0307412_10000013 3300031911 Bacteria 365239
58 Ga0307416_100002351 3300032002 Bacteria 10819
59 Ga0307411_10008542 3300032005 Bacteria 5316
60 Ga0237819_00008 3300038705 Bacteria 72529
61 Ga0237819_01046 3300038705 Bacteria 8236
62 Ga0436360_0768466 3300039438 Bacteria 3918
63 Ga0439449_0000436 3300042007 Bacteria 15418
64 Ga0450890_000019 3300042127 Bacteria 45594
65 Ga0450892_000078 3300042130 Bacteria 10695
66 Ga0450893_0002182 3300042532 Bacteria 3048
67 Ga0466969_0008618 3300044656 Bacteria 5409
68 Ga0466968_0017195 3300044735 Bacteria 2887
69 Ga0496104_0005438 3300048907 Bacteria 11147
70 Ga0496116_0011370 3300048919 Bacteria 7378
71 Ga0496116_0023546 3300048919 Bacteria 4584
72 Ga0496117_0009627 3300048920 Bacteria 8945
73 Ga0496118_0024555 3300048921 Bacteria 5197
74 Ga0496121_0069346 3300048924 Bacteria 2846
75 Ga0496122_0026194 3300048925 Bacteria 5037
76 Ga0496122_0083332 3300048925 Bacteria 2218
77 Ga0496123_0005175 3300048926 Bacteria 13266
78 Ga0496123_0056324 3300048926 Bacteria 2570
79 Ga0496124_0000434 3300048927 Bacteria 74161
80 Ga0496125_0001139 3300048928 Bacteria 40438
81 Ga0496125_0003702 3300048928 Bacteria 18248
82 Ga0496125_0011948 3300048928 Bacteria 8646
83 Ga0496126_0048141 3300048929 Bacteria 3898
84 Ga0501305_000635 3300049161 Bacteria 2992
85 Ga0501312_000484 3300049528 Bacteria 3235
86 Ga0501315_000373 3300049531 Bacteria 2992
87 Ga0501316_000553 3300049532 Bacteria 2655
88 Ga0501032_0032917 3300049569 Bacteria 3552
89 Ga0501034_0009952 3300049571 Bacteria 9937
90 nmdc:mga03683_206_c2 3300050489 Bacteria 14413
91 nmdc:mga03n38_13771_c1 3300050490 Bacteria 3082
92 nmdc:mga0k408_2167_c1 3300050493 Bacteria 6333
93 nmdc:mga07m45_8405_c1 3300050496 Bacteria 5305
94 nmdc:mga05p37_25786_c1 3300050507 Bacteria 7149
95 nmdc:mga09592_41657_c1 3300050508 Bacteria 3861
96 nmdc:mga0a205_16546_c1 3300050515 Bacteria 6908
97 Ga0500555_000837 3300053103 Bacteria 11000
98 Ga0500556_0000547 3300053104 Bacteria 25212
99 Ga0500642_0001818 3300053130 Bacteria 6160
100 2819724390 2818991468 Bacteria 3723169
101 2511178089 2510917027 Bacteria 5287437
102 2511699227 2511231119 Bacteria 4019861
103 2512640290 2512564013 Bacteria 6286191
104 2512733723 2512564039 Bacteria 8739048
105 2524187111 2524023129 Bacteria 6762600
106 2540606453 2540341094 Bacteria 4061186
107 2545556578 2545555800 Bacteria 4222588
108 2555469681 2554235283 Bacteria 3683090
109 2556066135 2554235469 Bacteria 3590176
110 2563927369 2563366752 Bacteria 4961801
111 2563929522 2563366752 Bacteria 4961801
112 2578930018 2576861599 Bacteria 4217202
113 2587741731 2585428059 Bacteria 8696589
114 2595088762 2593339131 Bacteria 5116855
115 2601638980 2600255286 Bacteria 5390125
116 2631985784 2630968484 Bacteria 3876276
117 2643736347 2643221543 Bacteria 6628015
118 2644422917 2643221676 Bacteria 8119172
119 2644705100 2643221729 Bacteria 6621700
120 2644709793 2643221730 Bacteria 6523787
121 2644716762 2643221731 Bacteria 5623886
122 2644739599 2643221735 Bacteria 3676263
123 2651529430 2648501850 Bacteria 3975476
124 2673819274 2671180694 Bacteria 7506943
125 2674419518 2671180844 Bacteria 4164150
126 2685151973 2684622632 Bacteria 5380049
127 2686996492 2684623153 Bacteria 3878815
128 2687497743 2687453109 Bacteria 3860091
129 2695627171 2695420354 Bacteria 3922431
130 2698321191 2695420987 Bacteria 6152737
131 2705995917 2703719227 Bacteria 5631989
132 2712197179 2711768088 Bacteria 3195027
133 2717917027 2716884898 Bacteria 3928789
134 2721507136 2718218445 Bacteria 5113413
135 2723606508 2721755693 Bacteria 6126117
136 2730137104 2728369359 Bacteria 5621728
137 2738816457 2738541295 Bacteria 5730091
138 2738838368 2738541299 Bacteria 4020721
139 2739154827 2738541358 Bacteria 5932299
140 2739207801 2738543006 Bacteria 5904091
141 2739229786 2738543010 Bacteria 5583595
142 2739268455 2738543017 Bacteria 4271950
143 2753808820 2751185905 Bacteria 6142767
144 2757565064 2757320391 Bacteria 4746095
145 2777763976 2775507177 Bacteria 4384303
146 2777835580 2775507192 Bacteria 4622234
147 2791213612 2788500588 Bacteria 4584915
148 2802437824 2802428803 Bacteria 5806948
149 2808867927 2808606364 Bacteria 4465927
150 2809054679 2808606399 Bacteria 4021018
151 2812315623 2811994870 Bacteria 3776934
152 2817479571 2816332295 Bacteria 4352468
153 2819571232 2818991441 Bacteria 5062707
154 2819581193 2818991443 Bacteria 6598732
155 2819627300 2818991451 Bacteria 4697364
156 2819672323 2818991459 Bacteria 8736032
157 2821112981 2821111986 Bacteria 6894338
158 2823527615 2823526263 Bacteria 3765752
159 2852677233 2852673933 Bacteria 3347676
160 2857459912 2857453340 Bacteria 8090534
161 2857476815 2857472729 Bacteria 6568124
162 2857588478 2857586860 Bacteria 4354574
163 2858440396 2858438669 Bacteria 2058402
164 2860838859 2860837431 Bacteria 4202080
165 2864734793 2864733723 Bacteria 6770668
166 2865003967 2865002811 Bacteria 6333767
167 2877769987 2877768649 Bacteria 3957164
168 2880170991 2880169592 Bacteria 3900066
169 2881634761 2881633906 Bacteria 2972201
170 2881644228 2881644220 Bacteria 5302661
171 2885529462 2885526491 Bacteria 7164189
172 2885532336 2885526491 Bacteria 7164189
173 2886634803 2886627955 Bacteria 7618130
174 2889045484 2889042446 Bacteria 7618936
175 2889277062 2889276214 Bacteria 5979355
176 2897110997 2897109615 Bacteria 4009619
177 2898910125 2898907183 Bacteria 4067722
178 2904114520 2904113452 Bacteria 7796941
179 2904164728 2904162308 Bacteria 7086713
180 2904167864 2904162308 Bacteria 7086713
181 2904492355 2904490793 Bacteria 7046938
182 2904564326 2904560550 Bacteria 4029838
183 2904596250 2904595352 Bacteria 6124848
184 2904607649 2904606771 Bacteria 4684500
185 2904759726 2904755435 Bacteria 7986759
186 2907203070 2907202186 Bacteria 6632024
187 2908666106 2908665501 Bacteria 3678115
188 2915601759 2915597211 Bacteria 6475886
189 2915607659 2915606848 Bacteria 6032732
190 2916973513 2916971899 Bacteria 4250608
191 2919093702 2919093281 Bacteria 3660974
192 2919161579 2919160200 Bacteria 6929020
193 2919415612 2919414237 Bacteria 5429133
194 2919430787 2919425241 Bacteria 8055701
195 2919729395 2919726948 Bacteria 3696050
196 2925331075 2925326138 Bacteria 9652120
197 2928515239 2928510474 Bacteria 4815308
198 2929186888 2929183550 Bacteria 6377511
199 2929237667 2929233124 Bacteria 5948380
200 2931388916 2931384279 Bacteria 7299545
201 2936343495 2936340661 Bacteria 5139038
202 2938921861 2938917290 Bacteria 5914775
203 2939681864 2939679117 Bacteria 6921672
204 2939703044 2939702853 Bacteria 5139229
205 2945992515 2945991243 Bacteria 7008369
206 2946055261 2946053406 Bacteria 6978655
207 2947430754 2947426588 Bacteria 5357194
208 2954774889 2954773129 Bacteria 3741715
209 2956899872 2956897341 Bacteria 5447711
210 2962292278 2962290636 Bacteria 4072939
211 2965765060 2965761152 Bacteria 5806513
212 2969138252 2969136845 Bacteria 3923176
213 2969142431 2969141011 Bacteria 4118468
214 2969767956 2969765954 Bacteria 4216713
215 2969772048 2969770375 Bacteria 4271280
216 2971412700 2971410472 Bacteria 8311090
217 2971894747 2971893375 Bacteria 3929648
218 2979087651 2979083700 Bacteria 5894929
219 2980185621 2980182181 Bacteria 9454109
220 2980494052 2980492589 Bacteria 4072961
221 2984529110 2984527788 Bacteria 5288478
222 2984535216 2984532647 Bacteria 5288506
223 2996710740 2996706504 Bacteria 5757485
224 3006831318 3006826541 Bacteria 4678913
225 3006859895 3006858327 Bacteria 4317835
226 3006880498 3006879489 Bacteria 4064221
227 3006973362 3006969106 Bacteria 4739423
228 648172488 648028048 Bacteria 5394884
229 8022623887 8022621104 Bacteria 5241040
230 8022634593 8022630665 Bacteria 3886130
231 8022653867 8022653035 Bacteria 4035078
232 8022796593 8022792930 Bacteria 5693794
233 8022895658 8022893055 Bacteria 5300455
234 8022916476 8022914991 Bacteria 5584517
235 8022949211 8022948649 Bacteria 5366783
236 8023442822 8023438354 Bacteria 5779374
237 8023444860 8023444577 Bacteria 5661597
238 8051953120 8051952484 Bacteria 3926774
239 8052174379 8052174270 Bacteria 3881265
240 8054800597 8054795415 Bacteria 9785225
241 8055637217 8055632911 Bacteria 5283357
242 8056538686 8056533031 Bacteria 8964429
243 8057475675 8057473075 Bacteria 5892720
244 8057586440 8057582654 Bacteria 5218944
245 8057632442 8057632132 Bacteria 4726859
246 8057737979 8057733483 Bacteria 6578323
247 8057981879 8057977335 Bacteria 5694872
248 JGI25159J45721_1008358
249 JGI25151J46595_10000020
250 JGI25151J46595_10000840
251 JGI25151J46595_10001268
252 JGI25151J46595_10004608
253 JGI25151J46595_10019981
254 JGI25151J46595_10022226
255 rootH2_10037630
256 Ga0006562J51391_1001255
257 Ga0006562J51391_1011627
258 Ga0055538_1000225
259 Ga0055532_1000071
260 Ga0068867_100000064
261 Ga0070664_100001816
262 Ga0075428_100017333
263 Ga0105244_10001663
264 Ga0105250_10001193
265 Ga0111539_10058701
266 Ga0114129_10030996
267 Ga0105243_10000088
268 Ga0105246_10007560
269 Ga0206356_10379324
270 Ga0209784_100098
271 Ga0209566_100076
272 Ga0209147_100010
273 Ga0209147_100086
274 Ga0209147_100212
275 Ga0209147_102016
276 Ga0209437_100249
277 Ga0209130_1000353
278 Ga0209675_1007699
279 Ga0209676_1001484
280 Ga0209025_1000001
281 Ga0209025_1000127
282 Ga0209025_1000158
283 Ga0209025_1000302
284 Ga0209025_1000751
285 Ga0209025_1000798
286 Ga0209025_1004009
287 Ga0209025_1004707
288 Ga0209025_1007485
289 Ga0209025_1007855
290 Ga0209025_1015325
291 Ga0209025_1022680
292 Ga0207696_1000504
293 Ga0207696_1004968
294 Ga0207655_1000590
295 Ga0207649_10006373
296 Ga0207709_10000270
297 Ga0207648_10000192
298 Ga0237817_10051
299 Ga0237817_10058
300 Ga0265327_10000369
301 Ga0307408_100000021
302 Ga0307408_100001048
303 Ga0307407_10000058
304 Ga0307412_10000013
305 Ga0307416_100002351
306 Ga0307411_10008542
307 Ga0237819_00008
308 Ga0237819_01046
309 Ga0436360_0768466
310 Ga0439449_0000436
311 Ga0450890_000019
312 Ga0450892_000078
313 Ga0450893_0002182
314 Ga0466969_0008618
315 Ga0466968_0017195
316 Ga0496104_0005438
317 Ga0496116_0011370
318 Ga0496116_0023546
319 Ga0496117_0009627
320 Ga0496118_0024555
321 Ga0496121_0069346
322 Ga0496122_0026194
323 Ga0496122_0083332
324 Ga0496123_0005175
325 Ga0496123_0056324
326 Ga0496124_0000434
327 Ga0496125_0001139
328 Ga0496125_0003702
329 Ga0496125_0011948
330 Ga0496126_0048141
331 Ga0501305_000635
332 Ga0501312_000484
333 Ga0501315_000373
334 Ga0501316_000553
335 Ga0501032_0032917
336 Ga0501034_0009952
337 nmdc:mga03683_206_c2
338 nmdc:mga03n38_13771_c1
339 nmdc:mga0k408_2167_c1
340 nmdc:mga07m45_8405_c1
341 nmdc:mga05p37_25786_c1
342 nmdc:mga09592_41657_c1
343 nmdc:mga0a205_16546_c1
344 Ga0500555_000837
345 Ga0500556_0000547
346 Ga0500642_0001818
347 2819724390
348 2511178089
349 2511699227
350 2512640290
351 2512733723
352 2524187111
353 2540606453
354 2545556578
355 2555469681
356 2556066135
357 2563927369
358 2563929522
359 2578930018
360 2587741731
361 2595088762
362 2601638980
363 2631985784
364 2643736347
365 2644422917
366 2644705100
367 2644709793
368 2644716762
369 2644739599
370 2651529430
371 2673819274
372 2674419518
373 2685151973
374 2686996492
375 2687497743
376 2695627171
377 2698321191
378 2705995917
379 2712197179
380 2717917027
381 2721507136
382 2723606508
383 2730137104
384 2738816457
385 2738838368
386 2739154827
387 2739207801
388 2739229786
389 2739268455
390 2753808820
391 2757565064
392 2777763976
393 2777835580
394 2791213612
395 2802437824
396 2808867927
397 2809054679
398 2812315623
399 2817479571
400 2819571232
401 2819581193
402 2819627300
403 2819672323
404 2821112981
405 2823527615
406 2852677233
407 2857459912
408 2857476815
409 2857588478
410 2858440396
411 2860838859
412 2864734793
413 2865003967
414 2877769987
415 2880170991
416 2881634761
417 2881644228
418 2885529462
419 2885532336
420 2886634803
421 2889045484
422 2889277062
423 2897110997
424 2898910125
425 2904114520
426 2904164728
427 2904167864
428 2904492355
429 2904564326
430 2904596250
431 2904607649
432 2904759726
433 2907203070
434 2908666106
435 2915601759
436 2915607659
437 2916973513
438 2919093702
439 2919161579
440 2919415612
441 2919430787
442 2919729395
443 2925331075
444 2928515239
445 2929186888
446 2929237667
447 2931388916
448 2936343495
449 2938921861
450 2939681864
451 2939703044
452 2945992515
453 2946055261
454 2947430754
455 2954774889
456 2956899872
457 2962292278
458 2965765060
459 2969138252
460 2969142431
461 2969767956
462 2969772048
463 2971412700
464 2971894747
465 2979087651
466 2980185621
467 2980494052
468 2984529110
469 2984535216
470 2996710740
471 3006831318
472 3006859895
473 3006880498
474 3006973362
475 648172488
476 8022623887
477 8022634593
478 8022653867
479 8022796593
480 8022895658
481 8022916476
482 8022949211
483 8023442822
484 8023444860
485 8051953120
486 8052174379
487 8054800597
488 8055637217
489 8056538686
490 8057475675
491 8057586440
492 8057632442
493 8057737979
494 8057981879

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01717

Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

494

817

1

PF08267

Meth_synt_1

Cobalamin-independent synthase, N-terminal domain

69

378

0.97

PF08267

Meth_synt_1

Cobalamin-independent synthase, N-terminal domain

588

777

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xdj-assembly2.cif.gz_B crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and homocysteine 0.9645 3 754
1xr2-assembly1.cif.gz_A crystal structure of oxidized t. maritima cobalamin-independent methionine synthase complexed with methyltetrahydrofolate 0.9617 4 753
3bq6-assembly2.cif.gz_B crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ (monoclinic) 0.9616 5 755
1xdj-assembly1.cif.gz_A crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and homocysteine 0.9612 5 757
1xdj-assembly2.cif.gz_B crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and homocysteine 0.9605 3 754
ID Description Score Start End Superfamily
2nq5A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9699 407 755 3.20.20.210
4l61A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9607 387 755 3.20.20.210
af_Q54X49_428_818_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9577 369 753 3.20.20.210
1xdjA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9571 389 757 3.20.20.210
4l61A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9554 387 755 3.20.20.210
ID Description Score Start End GO Terms
AF-Q3EU19-F1-model_v4 deleted 0.996 1 224
AF-A0A1W2GGV6-F1-model_v4 deleted 0.9947 1 761
AF-A0A2A8M528-F1-model_v4 deleted 0.9945 1 761
AF-A0A5K5INC6-F1-model_v4 deleted 0.9938 1 761
AF-A0A4U3BF75-F1-model_v4 deleted 0.9935 1 611

Map