F359363

General Info

Members Datasets Scaffolds Average Seq Length
247 202 156 376

Family's Representative Sequence

Representative Sequence 3300048928|Ga0496125_0004709|Ga0496125_0004709_4100_5308
Length 402
Sequence MRQTRLKHLKNQVPSCRGTSEMQVIKALTWDHPRGYNALATASKLPDVIAAGLNIHWDKQPLEGFESHPIADLCARYDLVVLDHPHVGEAISGDCLLSLEDVFGAETVAELAKASIGPSLTSYRFAGKHWALPLDAATQVMALRPDLSDCVPVIWDDVLRLSQQSGKVALSLAGPHACLSFLSIAAAFGEAPAEKDPNILVSKSVGQQVYDLMAELAARSPASVRHKNPIGILGHMAEHDDVALSPLVYGYVNYAAPQSGKPVAFHNAPSSATGSRPGSTLGGTGIGISRRAHITSSLKSHLLWLMSREAQSGFIPDHEGQPSRRDAWHDERVNRRWGNFYRNTADTLEQAYVRPRHDGYIAFQGKASALLGAAFDERRPASAVLNELQTLYAVSRVHAGER

Samples

Sample ID Description Type Environment
1 2510065057 Sinorhizobium meliloti WSM1022 Isolate Nodule
2 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
3 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
4 2513237089 Sinorhizobium medicae DI28 Isolate Nodule
5 2513237091 Sinorhizobium meliloti RRI128 Isolate Nodule
6 2513237160 Sinorhizobium medicae WSM244 Isolate Nodule
7 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
8 2516653046 Sinorhizobium meliloti BO21CC Isolate Nodule
9 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
10 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
11 2551306091 Sinorhizobium meliloti C0431A Isolate Nodule
12 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
13 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
14 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
15 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
16 2643221584 Caulobacter sp. Root656 Isolate Unclassified
17 2643221607 Rhizobium sp. Root73 Isolate Unclassified
18 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
19 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
20 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
21 2738541277 Variovorax sp. GV051 Isolate Unclassified
22 2738543019 Variovorax sp. GV040 Isolate Unclassified
23 2751185800 Brucella pituitosa AA2 Isolate Unclassified
24 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
25 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
26 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
27 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
28 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
29 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
30 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
31 2818991435 Caulobacter henricii 536 Isolate Unclassified
32 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
33 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
34 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
35 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
36 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
37 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
38 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
39 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
40 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
41 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
42 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
43 2915980308 Sinorhizobium medicae USDA1149 Isolate Nodule
44 2916021584 Sinorhizobium meliloti USDA1550 Isolate Nodule
45 2916041962 Sinorhizobium meliloti USDA1795 Isolate Nodule
46 2916048683 Sinorhizobium meliloti USDA1796 Isolate Nodule
47 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
48 2916076590 Sinorhizobium meliloti USDA1661 Isolate Nodule
49 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
50 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
51 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
52 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
53 2937009748 Sinorhizobium meliloti USDA1162 Isolate Nodule
54 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
55 2937029754 Sinorhizobium medicae USDA1624 Isolate Nodule
56 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
57 2937078374 Sinorhizobium medicae USDA1004 Isolate Nodule
58 2937084907 Sinorhizobium medicae USDA1664 Isolate Nodule
59 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
60 2957375807 Sinorhizobium medicae USDA1632 Isolate Nodule
61 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
62 2957408893 Sinorhizobium meliloti USDA1163 Isolate Nodule
63 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
64 2957450854 Sinorhizobium meliloti USDA1655 Isolate Nodule
65 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
66 2960610863 Sinorhizobium meliloti USDA1792 Isolate Nodule
67 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
68 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
69 2960687367 Sinorhizobium meliloti USDA1462 Isolate Nodule
70 2960693952 Sinorhizobium medicae USDA1630 Isolate Nodule
71 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
72 2964636051 Sinorhizobium meliloti USDA1594 Isolate Nodule
73 2964698721 Sinorhizobium meliloti USDA1656 Isolate Nodule
74 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
75 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
76 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
77 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
78 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
79 2970122695 Sinorhizobium medicae 3082 Isolate Nodule
80 2970143518 Sinorhizobium medicae USDA1652 Isolate Nodule
81 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
82 2977516862 Sinorhizobium meliloti USDA1791 Isolate Nodule
83 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
84 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
85 2977565890 Sinorhizobium meliloti USDA1617 Isolate Nodule
86 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
87 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
88 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
89 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
90 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
91 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
92 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
93 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
94 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
95 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
96 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
97 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
98 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
99 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
100 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
101 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
102 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
103 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
104 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
105 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
106 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
107 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
108 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
109 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
110 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
111 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
112 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
114 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
115 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
117 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
124 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
125 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
127 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
128 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
129 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
130 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
131 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
132 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
133 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
134 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
135 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
136 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
137 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
138 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
139 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
140 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
141 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
142 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
143 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
144 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
145 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
146 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
147 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
148 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
149 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
150 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
151 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
152 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
153 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
154 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
155 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
156 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
157 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
158 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
159 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
160 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
161 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
162 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
163 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
164 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
165 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
166 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
167 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
168 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
169 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
170 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
171 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
172 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
173 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
174 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
175 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
176 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
177 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
178 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
179 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
180 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
182 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
183 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
184 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
185 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
186 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
187 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
188 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
189 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
190 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
191 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
192 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
193 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
194 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
195 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
196 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
197 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
198 648276728 Sinorhizobium meliloti BL225C Isolate Nodule
199 8003992118 Sinorhizobium meliloti RRI128 Isolate Nodule
200 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule
201 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
202 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 63.16
Metatranscriptomes 0
Isolates 36.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.03
Nodule 27.94
Rhizoplane 0.4
Rhizosphere 36.84
Stem 0
Stem Tuber 0
Unclassified 15.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1000158 3300002987 Bacteria 31947
2 JGI25151J46595_10008001 3300003187 Bacteria 5125
3 JGI25160J50197_1000026 3300003354 Bacteria 184693
4 JGI25161J50226_1000014 3300003374 Bacteria 191109
5 Ga0055536_1000224 3300003781 Bacteria 45927
6 Ga0055536_1000722 3300003781 Bacteria 22138
7 Ga0055530_10001038 3300003791 Bacteria 22140
8 Ga0055530_10014828 3300003791 Bacteria 2575
9 Ga0055531_10000610 3300003794 Bacteria 30977
10 Ga0055531_10001285 3300003794 Bacteria 18916
11 Ga0055531_10001590 3300003794 Bacteria 16552
12 Ga0055543_1000079 3300004625 Bacteria 84916
13 Ga0065165_1000073 3300005262 Bacteria 164910
14 Ga0068868_100239728 3300005338 Bacteria 1523
15 Ga0068853_100027510 3300005539 Bacteria 4776
16 Ga0070665_100005166 3300005548 Bacteria 13509
17 Ga0068856_100024637 3300005614 Bacteria 5858
18 Ga0068852_100012893 3300005616 Bacteria 6372
19 Ga0068862_100035397 3300005844 Bacteria 4229
20 Ga0079104_1003039 3300006946 Bacteria 8217
21 Ga0105240_10055179 3300009093 Bacteria 4976
22 Ga0105239_10220251 3300010375 Bacteria 2128
23 Ga0157370_10016348 3300013104 Bacteria 7515
24 Ga0157370_10033431 3300013104 Bacteria 5015
25 Ga0183365_10003 3300015684 Bacteria 414944
26 Ga0213875_10044331 3300021388 Bacteria 2089
27 Ga0228711_1005574 3300022739 Bacteria 19128
28 Ga0228710_1006649 3300022740 Bacteria 17425
29 Ga0209436_112094 3300025208 Bacteria 1483
30 Ga0209130_1000219 3300025284 Bacteria 74906
31 Ga0209676_1000087 3300025292 Bacteria 263734
32 Ga0209676_1000136 3300025292 Bacteria 181860
33 Ga0209025_1000079 3300025294 Bacteria 270973
34 Ga0209758_1000571 3300025297 Bacteria 57774
35 Ga0209050_1000083 3300025298 Bacteria 263734
36 Ga0209050_1000238 3300025298 Bacteria 119729
37 Ga0207426_1000075 3300025302 Bacteria 321337
38 Ga0209051_1001350 3300025303 Bacteria 21289
39 Ga0209257_1000142 3300025304 Bacteria 200756
40 Ga0209257_1002211 3300025304 Bacteria 20060
41 Ga0209257_1002452 3300025304 Bacteria 18413
42 Ga0207705_10161255 3300025909 Bacteria 1685
43 Ga0207690_10020731 3300025932 Bacteria 4066
44 Ga0207667_10002994 3300025949 Bacteria 20985
45 Ga0207677_10211320 3300026023 Bacteria 1550
46 Ga0209281_1001012 3300027111 Bacteria 21997
47 Ga0209281_1001545 3300027111 Bacteria 12743
48 Ga0209282_1000296 3300027666 Bacteria 24574
49 Ga0268266_10002386 3300028379 Bacteria 20296
50 Ga0307515_10227868 3300028794 Bacteria 1664
51 Ga0307509_10000038 3300031507 Bacteria 188458
52 Ga0315914_1001884 3300031967 Bacteria 31965
53 Ga0307409_100148199 3300031995 Bacteria 2033
54 Ga0307414_10029235 3300032004 Bacteria 3585
55 Ga0307510_10000008 3300033180 Bacteria 433990
56 Ga0307510_10053460 3300033180 Bacteria 4244
57 Ga0315913_1000879 3300033430 Bacteria 30055
58 Ga0315915_1000436 3300033464 Bacteria 42125
59 Ga0373936_0000983 3300035113 Bacteria 10166
60 Ga0373936_0022679 3300035113 Bacteria 2444
61 Ga0395905_0001090 3300037471 Bacteria 34130
62 Ga0395905_0004612 3300037471 Bacteria 14261
63 Ga0436364_1450454 3300037853 Bacteria 4171
64 Ga0439461_0000725 3300041410 Bacteria 4803
65 Ga0439452_014682 3300042010 Bacteria 2168
66 Ga0439462_0002243 3300042015 Bacteria 4462
67 Ga0439446_0002828 3300042156 Bacteria 4220
68 Ga0439459_0003396 3300042438 Bacteria 2524
69 Ga0495617_018150 3300046452 Bacteria 2379
70 Ga0495627_001411 3300046453 Bacteria 14195
71 Ga0495638_0003619 3300046460 Bacteria 12076
72 Ga0495638_0014437 3300046460 Bacteria 5337
73 Ga0495638_0023603 3300046460 Bacteria 4020
74 Ga0495638_0128969 3300046460 Bacteria 1488
75 Ga0495650_0000091 3300046471 Bacteria 228697
76 Ga0495650_0000877 3300046471 Bacteria 35686
77 Ga0495585_0132948 3300046492 Bacteria 1308
78 Ga0495596_0000084 3300046500 Bacteria 65040
79 Ga0495596_0001192 3300046500 Bacteria 15197
80 Ga0495607_0061977 3300046501 Bacteria 2123
81 Ga0495583_0000364 3300046506 Bacteria 70975
82 Ga0495583_0018613 3300046506 Bacteria 3652
83 Ga0495606_0014444 3300046507 Bacteria 6162
84 Ga0495610_0000019 3300046512 Bacteria 351524
85 Ga0495610_0003229 3300046512 Bacteria 12890
86 Ga0495616_0000674 3300046513 Bacteria 25275
87 Ga0495632_0000001 3300046519 Bacteria 873295
88 Ga0495632_0000844 3300046519 Bacteria 27026
89 Ga0495632_0001919 3300046519 Bacteria 16618
90 Ga0495637_0000183 3300046520 Bacteria 48717
91 Ga0495643_0000006 3300046522 Bacteria 419524
92 Ga0495643_0008714 3300046522 Bacteria 6398
93 Ga0495643_0034380 3300046522 Bacteria 2798
94 Ga0495648_0000075 3300046524 Bacteria 129579
95 Ga0495648_0006930 3300046524 Bacteria 9140
96 Ga0495663_0000001 3300046525 Bacteria 595264
97 Ga0495609_0011245 3300046538 Bacteria 4268
98 Ga0495633_0000360 3300046558 Bacteria 49094
99 Ga0495633_0000520 3300046558 Bacteria 38484
100 Ga0495633_0001343 3300046558 Bacteria 19279
101 Ga0495656_0017423 3300046615 Bacteria 2741
102 Ga0495668_0000014 3300046616 Bacteria 442055
103 Ga0495661_0085242 3300046665 Bacteria 1811
104 Ga0495670_0000048 3300046691 Bacteria 64848
105 Ga0495671_0000008 3300046692 Bacteria 419524
106 Ga0495671_0081289 3300046692 Bacteria 1588
107 Ga0495649_0098671 3300046694 Bacteria 1554
108 Ga0495600_0002601 3300046809 Bacteria 10403
109 Ga0495660_0002388 3300046810 Bacteria 11984
110 Ga0495673_0000139 3300047469 Bacteria 130652
111 Ga0495673_0005213 3300047469 Bacteria 7904
112 Ga0495681_0000061 3300047470 Bacteria 99933
113 Ga0495686_0002742 3300047472 Bacteria 16101
114 Ga0495686_0020979 3300047472 Bacteria 4349
115 Ga0495615_0000200 3300048090 Bacteria 14054
116 Ga0495626_0002915 3300048091 Bacteria 11397
117 Ga0496101_0046609 3300048904 Bacteria 3109
118 Ga0496119_0030172 3300048922 Bacteria 3661
119 Ga0496122_0004130 3300048925 Bacteria 18363
120 Ga0496122_0040529 3300048925 Bacteria 3699
121 Ga0496122_0152141 3300048925 Bacteria 1426
122 Ga0496123_0002858 3300048926 Bacteria 20366
123 Ga0496123_0113032 3300048926 Bacteria 1547
124 Ga0496124_0012214 3300048927 Bacteria 8496
125 Ga0496125_0002647 3300048928 Bacteria 22880
126 Ga0496125_0004709 3300048928 Bacteria 15548
127 Ga0496125_0075139 3300048928 Bacteria 2616
128 Ga0496125_0090712 3300048928 Bacteria 2292
129 Ga0496126_0157799 3300048929 Bacteria 1941
130 Ga0501034_0223785 3300049571 Bacteria 1833
131 Ga0501073_0001496 3300049589 Bacteria 17294
132 Ga0501242_000490 3300049674 Unclassified 3486
133 Ga0501257_000224 3300049686 Bacteria 11119
134 Ga0501083_0069975 3300049744 Bacteria 2335
135 Ga0501044_0323975 3300049823 Bacteria 1465
136 Ga0500635_0000919 3300053080 Bacteria 7129
137 Ga0500644_0000005 3300053088 Bacteria 164966
138 Ga0500644_0001691 3300053088 Bacteria 5752
139 Ga0500608_000049 3300053122 Bacteria 54754
140 Ga0500608_000141 3300053122 Bacteria 29668
141 Ga0500608_008028 3300053122 Bacteria 4409
142 Ga0500658_0009709 3300053134 Bacteria 3547
143 Ga0500658_0025660 3300053134 Bacteria 2266
144 Ga0500559_0001602 3300053136 Bacteria 12594
145 Ga0500559_0033333 3300053136 Bacteria 2217
146 Ga0500564_000013 3300053138 Bacteria 54100
147 Ga0500568_0028257 3300053139 Bacteria 2339
148 Ga0500604_0008832 3300053151 Bacteria 2677
149 Ga0500619_007145 3300053154 Bacteria 2625
150 Ga0500622_0000159 3300053156 Bacteria 71047
151 Ga0500622_0001692 3300053156 Bacteria 17162
152 Ga0500622_0009894 3300053156 Bacteria 5261
153 Ga0500622_0047491 3300053156 Bacteria 2217
154 Ga0500636_0001131 3300053177 Bacteria 14293
155 Ga0500609_002383 3300053731 Bacteria 2682
156 Ga0500609_002657 3300053731 Bacteria 2543

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053156 Ga0500622_0047491 Ga0500622_0047491_87_1097 335
2 3300046452 Ga0495617_018150 Ga0495617_018150_10_1080 349
3 3300046460 Ga0495638_0003619 Ga0495638_0003619_5801_6937 352
4 3300046513 Ga0495616_0000674 Ga0495616_0000674_5713_6849 352
5 3300053731 Ga0500609_002657 Ga0500609_002657_456_1592 352
6 3300037471 Ga0395905_0001090 Ga0395905_0001090_23354_24490 356
7 3300046558 Ga0495633_0000360 Ga0495633_0000360_43022_44143 359
8 3300049744 Ga0501083_0069975 Ga0501083_0069975_294_1442 360
9 3300048904 Ga0496101_0046609 Ga0496101_0046609_1690_2895 361
10 3300053080 Ga0500635_0000919 Ga0500635_0000919_4198_5292 361
11 3300053177 Ga0500636_0001131 Ga0500636_0001131_2364_3500 361
12 3300013104 Ga0157370_10016348 Ga0157370_100163483 362
13 3300015684 Ga0183365_10003 Ga0183365_10003154 362
14 3300021388 Ga0213875_10044331 Ga0213875_100443311 362
15 3300037853 Ga0436364_1450454 Ga0436364_1450454_2942_4093 362
16 3300049571 Ga0501034_0223785 Ga0501034_0223785_549_1652 362
17 3300053122 Ga0500608_000049 Ga0500608_000049_26493_27593 363
18 3300053136 Ga0500559_0001602 Ga0500559_0001602_7238_8338 363
19 3300049674 Ga0501242_000490 Ga0501242_000490_482_1618 364
20 3300049686 Ga0501257_000224 Ga0501257_000224_5626_6762 364
21 3300053122 Ga0500608_000141 Ga0500608_000141_11389_12504 364
22 3300046524 Ga0495648_0000075 Ga0495648_0000075_45002_46138 365
23 3300047469 Ga0495673_0000139 Ga0495673_0000139_56353_57489 365
24 3300049589 Ga0501073_0001496 Ga0501073_0001496_4425_5573 365
25 3300053088 Ga0500644_0000005 Ga0500644_0000005_42356_43492 365
26 3300053138 Ga0500564_000013 Ga0500564_000013_35105_36241 365
27 3300046492 Ga0495585_0132948 Ga0495585_0132948_115_1251 366
28 3300046519 Ga0495632_0001919 Ga0495632_0001919_3019_4155 366
29 3300047469 Ga0495673_0005213 Ga0495673_0005213_5589_6725 366
30 iso_pu_bacteria 2510917021 2511125926 366
31 iso_pu_bacteria 2857504554 2857506551 366
32 iso_pu_bacteria 8054302542 8054302993 366
33 3300046453 Ga0495627_001411 Ga0495627_001411_1408_2520 367
34 3300046471 Ga0495650_0000877 Ga0495650_0000877_16274_17386 367
35 3300046512 Ga0495610_0000019 Ga0495610_0000019_251501_252613 367
36 3300046519 Ga0495632_0000844 Ga0495632_0000844_9298_10410 367
37 3300047470 Ga0495681_0000061 Ga0495681_0000061_73554_74666 367
38 3300053151 Ga0500604_0008832 Ga0500604_0008832_692_1801 367
39 3300046500 Ga0495596_0000084 Ga0495596_0000084_34474_35595 368
40 3300046500 Ga0495596_0001192 Ga0495596_0001192_10351_11487 368
41 3300046506 Ga0495583_0018613 Ga0495583_0018613_1978_3099 368
42 3300046512 Ga0495610_0003229 Ga0495610_0003229_4806_5942 368
43 3300046522 Ga0495643_0008714 Ga0495643_0008714_1759_2880 368
44 3300046538 Ga0495609_0011245 Ga0495609_0011245_2366_3487 368
45 3300046616 Ga0495668_0000014 Ga0495668_0000014_139766_140881 368
46 3300046692 Ga0495671_0081289 Ga0495671_0081289_12_1133 368
47 3300048090 Ga0495615_0000200 Ga0495615_0000200_8114_9235 368
48 3300048091 Ga0495626_0002915 Ga0495626_0002915_6261_7397 368
49 3300048925 Ga0496122_0004130 Ga0496122_0004130_4879_6000 368
50 3300048926 Ga0496123_0002858 Ga0496123_0002858_4867_5988 368
51 3300048927 Ga0496124_0012214 Ga0496124_0012214_5990_7111 368
52 3300005539 Ga0068853_100027510 Ga0068853_1000275103 369
53 3300005614 Ga0068856_100024637 Ga0068856_1000246373 369
54 3300005616 Ga0068852_100012893 Ga0068852_1000128936 369
55 3300010375 Ga0105239_10220251 Ga0105239_102202512 369
56 3300013104 Ga0157370_10033431 Ga0157370_100334315 369
57 3300025932 Ga0207690_10020731 Ga0207690_100207313 369
58 3300025949 Ga0207667_10002994 Ga0207667_1000299410 369
59 3300046460 Ga0495638_0128969 Ga0495638_0128969_167_1288 369
60 3300046519 Ga0495632_0000001 Ga0495632_0000001_457940_459061 369
61 3300046520 Ga0495637_0000183 Ga0495637_0000183_25174_26295 369
62 3300046522 Ga0495643_0000006 Ga0495643_0000006_148353_149474 369
63 3300046524 Ga0495648_0006930 Ga0495648_0006930_5861_6982 369
64 3300046525 Ga0495663_0000001 Ga0495663_0000001_414235_415356 369
65 3300046558 Ga0495633_0000520 Ga0495633_0000520_7020_8141 369
66 3300046692 Ga0495671_0000008 Ga0495671_0000008_148353_149474 369
67 3300047472 Ga0495686_0020979 Ga0495686_0020979_1682_2803 369
68 3300048922 Ga0496119_0030172 Ga0496119_0030172_75_1187 369
69 3300041410 Ga0439461_0000725 Ga0439461_0000725_1371_2489 370
70 3300042010 Ga0439452_014682 Ga0439452_014682_325_1443 370
71 3300042015 Ga0439462_0002243 Ga0439462_0002243_1888_3006 370
72 3300042156 Ga0439446_0002828 Ga0439446_0002828_3075_4193 370
73 3300053134 Ga0500658_0009709 Ga0500658_0009709_1977_3095 370
74 3300053134 Ga0500658_0025660 Ga0500658_0025660_713_1843 370
75 3300053731 Ga0500609_002383 Ga0500609_002383_1414_2544 370
76 iso_pu_bacteria 2946787523 2946791317 370
77 3300046506 Ga0495583_0000364 Ga0495583_0000364_51762_52898 371
78 3300053136 Ga0500559_0033333 Ga0500559_0033333_552_1673 371
79 iso_pu_bacteria 2837651117 2837654043 371
80 3300003781 Ga0055536_1000722 Ga0055536_100072225 372
81 3300003791 Ga0055530_10001038 Ga0055530_100010382 372
82 3300025292 Ga0209676_1000087 Ga0209676_100008767 372
83 3300025298 Ga0209050_1000083 Ga0209050_100008367 372
84 3300025303 Ga0209051_1001350 Ga0209051_10013509 372
85 3300025304 Ga0209257_1002452 Ga0209257_10024523 372
86 iso_pu_bacteria 2582581280 2585153544 373
87 iso_pu_bacteria 2582581293 2585197348 373
88 iso_pu_bacteria 2643221552 2643780228 373
89 iso_pu_bacteria 2643221584 2643928577 373
90 iso_pu_bacteria 2818991435 2819536670 373
91 iso_pu_bacteria 2818991454 2819645831 373
92 3300003781 Ga0055536_1000224 Ga0055536_100022434 375
93 3300003791 Ga0055530_10014828 Ga0055530_100148282 375
94 3300003794 Ga0055531_10000610 Ga0055531_1000061022 375
95 3300003794 Ga0055531_10001285 Ga0055531_1000128510 375
96 3300003794 Ga0055531_10001590 Ga0055531_100015906 375
97 3300025292 Ga0209676_1000136 Ga0209676_100013693 375
98 3300025297 Ga0209758_1000571 Ga0209758_100057134 375
99 3300025298 Ga0209050_1000238 Ga0209050_100023856 375
100 3300025304 Ga0209257_1000142 Ga0209257_100014293 375
101 3300025304 Ga0209257_1002211 Ga0209257_10022119 375
102 3300028794 Ga0307515_10227868 Ga0307515_102278682 375
103 3300032004 Ga0307414_10029235 Ga0307414_100292352 375
104 3300037471 Ga0395905_0004612 Ga0395905_0004612_7004_8143 375
105 3300042438 Ga0439459_0003396 Ga0439459_0003396_1004_2140 375
106 3300046460 Ga0495638_0023603 Ga0495638_0023603_2242_3393 375
107 3300046558 Ga0495633_0001343 Ga0495633_0001343_3684_4820 375
108 3300046810 Ga0495660_0002388 Ga0495660_0002388_7784_8920 375
109 3300049823 Ga0501044_0323975 Ga0501044_0323975_208_1347 375
110 3300053088 Ga0500644_0001691 Ga0500644_0001691_3910_5061 375
111 3300053122 Ga0500608_008028 Ga0500608_008028_1046_2197 375
112 3300053156 Ga0500622_0000159 Ga0500622_0000159_22414_23565 375
113 iso_pu_bacteria 2828305725 2828307127 375
114 iso_pu_bacteria 2904541872 2904547631 375
115 iso_pu_bacteria 2929160207 2929167128 375
116 3300005548 Ga0070665_100005166 Ga0070665_10000516612 376
117 3300005844 Ga0068862_100035397 Ga0068862_1000353973 376
118 3300009093 Ga0105240_10055179 Ga0105240_100551792 376
119 3300025909 Ga0207705_10161255 Ga0207705_101612552 376
120 3300028379 Ga0268266_10002386 Ga0268266_100023866 376
121 3300033180 Ga0307510_10000008 Ga0307510_10000008347 376
122 3300047472 Ga0495686_0002742 Ga0495686_0002742_3193_4338 376
123 3300048929 Ga0496126_0157799 Ga0496126_0157799_505_1638 376
124 3300053156 Ga0500622_0009894 Ga0500622_0009894_2833_3993 376
125 iso_pu_bacteria 2597490356 2599104634 376
126 iso_pu_bacteria 2846952575 2846955491 376
127 iso_pu_bacteria 2848858292 2848862630 376
128 iso_pu_bacteria 2897803580 2897805088 376
129 3300003187 JGI25151J46595_10008001 JGI25151J46595_100080013 377
130 3300005338 Ga0068868_100239728 Ga0068868_1002397282 377
131 3300025294 Ga0209025_1000079 Ga0209025_1000079130 377
132 3300026023 Ga0207677_10211320 Ga0207677_102113202 377
133 3300048928 Ga0496125_0002647 Ga0496125_0002647_13773_14912 377
134 iso_pu_bacteria 2751185800 2753357073 377
135 iso_pu_bacteria 2758568016 2758639359 377
136 iso_pu_bacteria 2915650412 2915654421 377
137 3300033180 Ga0307510_10053460 Ga0307510_100534603 378
138 3300046471 Ga0495650_0000091 Ga0495650_0000091_21328_22464 378
139 3300046665 Ga0495661_0085242 Ga0495661_0085242_381_1517 378
140 3300046691 Ga0495670_0000048 Ga0495670_0000048_27138_28274 378
141 3300046809 Ga0495600_0002601 Ga0495600_0002601_3165_4301 378
142 3300053154 Ga0500619_007145 Ga0500619_007145_172_1308 378
143 iso_pu_bacteria 2510065057 2510304789 378
144 iso_pu_bacteria 2512875026 2512975366 378
145 iso_pu_bacteria 2513237089 2513605684 378
146 iso_pu_bacteria 2513237091 2513616007 378
147 iso_pu_bacteria 2513237160 2514008628 378
148 iso_pu_bacteria 2515154107 2515610118 378
149 iso_pu_bacteria 2516653046 2516898077 378
150 iso_pu_bacteria 2517487022 2517566973 378
151 iso_pu_bacteria 2551306091 2551725809 378
152 iso_pu_bacteria 2643221607 2644048088 378
153 iso_pu_bacteria 2643221636 2644200344 378
154 iso_pu_bacteria 2643221686 2644480883 378
155 iso_pu_bacteria 2643221689 2644502026 378
156 iso_pu_bacteria 2802428858 2802721174 378
157 iso_pu_bacteria 2802428859 2802728388 378
158 iso_pu_bacteria 2802428860 2802733856 378
159 iso_pu_bacteria 2802428861 2802740512 378
160 iso_pu_bacteria 2802428862 2802746795 378
161 iso_pu_bacteria 2802428863 2802753652 378
162 iso_pu_bacteria 2852387548 2852395183 378
163 iso_pu_bacteria 2889790730 2889792424 378
164 iso_pu_bacteria 2915980308 2915983425 378
165 iso_pu_bacteria 2916021584 2916025634 378
166 iso_pu_bacteria 2916041962 2916043206 378
167 iso_pu_bacteria 2916048683 2916049383 378
168 iso_pu_bacteria 2916061851 2916066737 378
169 iso_pu_bacteria 2916076590 2916076604 378
170 iso_pu_bacteria 2921250672 2921254814 378
171 iso_pu_bacteria 2921257292 2921259664 378
172 iso_pu_bacteria 2936996657 2936999492 378
173 iso_pu_bacteria 2937009748 2937012312 378
174 iso_pu_bacteria 2937023124 2937026250 378
175 iso_pu_bacteria 2937029754 2937032184 378
176 iso_pu_bacteria 2937036028 2937039534 378
177 iso_pu_bacteria 2937078374 2937081873 378
178 iso_pu_bacteria 2937084907 2937088356 378
179 iso_pu_bacteria 2957375807 2957380368 378
180 iso_pu_bacteria 2957395598 2957399667 378
181 iso_pu_bacteria 2957408893 2957412751 378
182 iso_pu_bacteria 2957437181 2957443739 378
183 iso_pu_bacteria 2957450854 2957454138 378
184 iso_pu_bacteria 2960591022 2960592993 378
185 iso_pu_bacteria 2960610863 2960611542 378
186 iso_pu_bacteria 2960631154 2960633562 378
187 iso_pu_bacteria 2960680706 2960683911 378
188 iso_pu_bacteria 2960687367 2960691281 378
189 iso_pu_bacteria 2960693952 2960698487 378
190 iso_pu_bacteria 2964615318 2964617697 378
191 iso_pu_bacteria 2964636051 2964638699 378
192 iso_pu_bacteria 2964698721 2964701119 378
193 iso_pu_bacteria 2967686174 2967691102 378
194 iso_pu_bacteria 2967728569 2967731898 378
195 iso_pu_bacteria 2967755722 2967756848 378
196 iso_pu_bacteria 2970026789 2970033158 378
197 iso_pu_bacteria 2970102677 2970106308 378
198 iso_pu_bacteria 2970122695 2970127974 378
199 iso_pu_bacteria 2970143518 2970147919 378
200 iso_pu_bacteria 2970177841 2970183552 378
201 iso_pu_bacteria 2977516862 2977517506 378
202 iso_pu_bacteria 2977530762 2977536539 378
203 iso_pu_bacteria 2977544691 2977550968 378
204 iso_pu_bacteria 2977565890 2977567779 378
205 iso_pu_bacteria 2989771324 2989772972 378
206 iso_pu_bacteria 648276728 648736253 378
207 iso_pu_bacteria 8003992118 8003998613 378
208 iso_pu_bacteria 8003999396 8004005548 378
209 iso_pu_bacteria 8057575449 8057576456 378
210 iso_pu_bacteria 2738541277 2738721111 379
211 iso_pu_bacteria 2738543019 2739280310 379
212 3300031507 Ga0307509_10000038 Ga0307509_1000003838 380
213 3300031995 Ga0307409_100148199 Ga0307409_1001481992 380
214 3300035113 Ga0373936_0000983 Ga0373936_0000983_5630_6799 380
215 3300035113 Ga0373936_0022679 Ga0373936_0022679_432_1595 380
216 3300053139 Ga0500568_0028257 Ga0500568_0028257_678_1850 380
217 3300053156 Ga0500622_0001692 Ga0500622_0001692_6168_7328 380
218 iso_pu_bacteria 2524023250 2524613581 380
219 3300048925 Ga0496122_0040529 Ga0496122_0040529_1090_2235 381
220 3300048925 Ga0496122_0152141 Ga0496122_0152141_98_1243 381
221 3300048926 Ga0496123_0113032 Ga0496123_0113032_249_1394 381
222 3300048928 Ga0496125_0004709 Ga0496125_0004709_4100_5308 381
223 3300048928 Ga0496125_0075139 Ga0496125_0075139_47_1192 381
224 3300048928 Ga0496125_0090712 Ga0496125_0090712_728_1873 381
225 3300002987 JGI25159J45721_1000158 JGI25159J45721_100015816 382
226 3300003354 JGI25160J50197_1000026 JGI25160J50197_100002646 382
227 3300003374 JGI25161J50226_1000014 JGI25161J50226_1000014144 382
228 3300004625 Ga0055543_1000079 Ga0055543_100007958 382
229 3300005262 Ga0065165_1000073 Ga0065165_1000073121 382
230 3300006946 Ga0079104_1003039 Ga0079104_10030393 382
231 3300022739 Ga0228711_1005574 Ga0228711_100557412 382
232 3300022740 Ga0228710_1006649 Ga0228710_100664912 382
233 3300025208 Ga0209436_112094 Ga0209436_1120942 382
234 3300025284 Ga0209130_1000219 Ga0209130_100021954 382
235 3300025302 Ga0207426_1000075 Ga0207426_1000075160 382
236 3300027111 Ga0209281_1001012 Ga0209281_100101217 382
237 3300027111 Ga0209281_1001545 Ga0209281_10015456 382
238 3300027666 Ga0209282_1000296 Ga0209282_100029613 382
239 3300031967 Ga0315914_1001884 Ga0315914_10018845 382
240 3300033430 Ga0315913_1000879 Ga0315913_100087924 382
241 3300033464 Ga0315915_1000436 Ga0315915_100043616 382
242 3300046460 Ga0495638_0014437 Ga0495638_0014437_3290_4447 382
243 3300046501 Ga0495607_0061977 Ga0495607_0061977_206_1354 382
244 3300046507 Ga0495606_0014444 Ga0495606_0014444_2780_3928 382
245 3300046522 Ga0495643_0034380 Ga0495643_0034380_1494_2642 382
246 3300046615 Ga0495656_0017423 Ga0495656_0017423_862_2010 382
247 3300046694 Ga0495649_0098671 Ga0495649_0098671_328_1476 382

Structural Annotation

Top 5 Hits

ID Description Score Start End
7c6r-assembly1.cif.gz_A crystal structure of beta-glycosides-binding protein (w177x) of abc transporter in a closed state bound to cellopentaose 0.8421 2 376
7ape-assembly1.cif.gz_A crystal structure of lpqy from mycobacterium thermoresistible in complex with trehalose 0.8317 3 375
7c6r-assembly1.cif.gz_A crystal structure of beta-glycosides-binding protein (w177x) of abc transporter in a closed state bound to cellopentaose 0.826 2 376
7ofy-assembly2.cif.gz_B crystal structure of sq binding protein from agrobacterium tumefaciens in complex with sulfoquinovosyl glycerol (sqgro) 0.8246 1 374
7yzu-assembly1.cif.gz_A crystal structure of the sulfoquinovosyl binding protein smof complexed with sqme 0.8212 4 374
ID Description Score Start End Superfamily
af_O53485_33_438_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7871 1 373 3.40.190.10
4r9gB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7792 1 115 3.40.190.10
2gh9A01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.779 4 115 3.40.190.10
5ysdB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7746 1 335 3.40.190.10
5ysdB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.771 1 335 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A4R3EIF2-F1-model_v4 Carbohydrate ABC transporter substrate-binding protein (CUT1 family) 0.9948 1 382 GO:0042597
AF-A0A2J0Z7S7-F1-model_v4 Extracellular solute-binding protein 0.9856 1 382 GO:0042597
AF-A0A2J0Z7S7-F1-model_v4 Extracellular solute-binding protein 0.9831 1 382 GO:0042597
AF-A0A543GG58-F1-model_v4 Carbohydrate ABC transporter substrate-binding protein (CUT1 family) 0.9813 2 375
AF-A0A0Q7VZ27-F1-model_v4 ABC transporter substrate-binding protein 0.9781 3 382 GO:0042597

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Predicted Structure (AlphaFold2)

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