F359341

General Info

Members Datasets Scaffolds Average Seq Length
247 195 494 409

Family's Representative Sequence

Representative Sequence 3300048903|Ga0496100_0117863|Ga0496100_0117863_392_1714
Length 440
Sequence LKPASFVDAALRAANYDRGLNRLPWSEFQMSQQGPVIVVSTSGRPSFATALDQAKVFPVIDASWDGAPRAVETLQPAAVLVATQDTSERGLDTLAKRIAAQQPYLPLIAVDPKIALPESALPFSYTGGNSDRLLARLRAALRVRTLHATVMRRRLDAGGGAPVAPSELDPTRDATVLLIGRGASYPALSVSLGERIGVVGALSIEAAARHLNVRDIDGIVLGEGFSERVVDAFLTVLTEDARFRNLPVVLTSHEPASAYDLPNLEIISGAPAYIANNALPLVRQHALETYLSRALRAIDAGGLLDARTGLLTPAAFGRDLATAVYQTAACGSGLSVARFAFDSGHPRAQLDGARIISRLMRQMDFGVAHDDGSVVVVFAETDLRAAHGIARRLSSVMRHTSHGKRDVRAEPVVTVATMLPEDSAKSLLARLDDEGRRAAS

Samples

Sample ID Description Type Environment
1 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
84 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
85 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
86 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
94 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
95 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
96 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
98 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
99 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
100 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
101 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
102 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
106 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
112 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
113 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
120 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
121 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
122 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
125 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
126 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
127 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
130 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
145 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
148 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
152 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
156 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
157 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
158 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
159 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
162 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
163 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
164 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
165 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
166 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
167 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
168 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
169 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
170 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
171 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
172 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
173 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
174 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
175 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
176 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
177 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
178 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
179 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
180 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
181 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
182 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
183 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
184 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
185 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
186 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
187 2791355199
188 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
189 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
190 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
191 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
192 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
193 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
194 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
195 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.31
Metatranscriptomes 0
Isolates 5.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.77
Nodule 4.86
Rhizoplane 9.31
Rhizosphere 59.11
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496100_0117863 3300048903 Bacteria 1854
2 Ga0070683_100042082 3300005329 Bacteria 4206
3 Ga0068868_100007627 3300005338 Bacteria 7717
4 Ga0070660_100239977 3300005339 Bacteria 1476
5 Ga0070668_100077382 3300005347 Bacteria 2600
6 Ga0070669_100034354 3300005353 Bacteria 3670
7 Ga0070671_100091613 3300005355 Bacteria 2547
8 Ga0070709_10000247 3300005434 Bacteria 34839
9 Ga0070713_100044808 3300005436 Bacteria 3622
10 Ga0070710_10005602 3300005437 Bacteria 5981
11 Ga0070711_100007158 3300005439 Bacteria 6772
12 Ga0070663_100095906 3300005455 Bacteria 2205
13 Ga0070663_100137862 3300005455 Bacteria 1859
14 Ga0070678_100023019 3300005456 Bacteria 4143
15 Ga0070707_100133360 3300005468 Bacteria 2416
16 Ga0070698_100310437 3300005471 Bacteria 1508
17 Ga0070699_100268541 3300005518 Bacteria 1526
18 Ga0070684_100036598 3300005535 Bacteria 4206
19 Ga0070697_100138299 3300005536 Bacteria 2047
20 Ga0070665_100081462 3300005548 Bacteria 3242
21 Ga0068855_100197365 3300005563 Bacteria 2267
22 Ga0068854_100065491 3300005578 Bacteria 2642
23 Ga0068859_100123586 3300005617 Bacteria 2655
24 Ga0068864_100122432 3300005618 Bacteria 2327
25 Ga0068863_100091624 3300005841 Bacteria 2883
26 Ga0068860_100002958 3300005843 Bacteria 17548
27 Ga0068862_100057243 3300005844 Bacteria 3342
28 Ga0068862_100071465 3300005844 Bacteria 2996
29 Ga0081455_10007659 3300005937 Bacteria 11343
30 Ga0081455_10024054 3300005937 Bacteria 5651
31 Ga0081538_10030450 3300005981 Bacteria 3663
32 Ga0081538_10064940 3300005981 Bacteria 2060
33 Ga0081539_10042978 3300005985 Bacteria 2625
34 Ga0075365_10006445 3300006038 Bacteria 6460
35 Ga0075365_10083141 3300006038 Bacteria 2172
36 Ga0075363_100015315 3300006048 Bacteria 3768
37 Ga0075364_10094244 3300006051 Bacteria 1989
38 Ga0070715_10010565 3300006163 Bacteria 3295
39 Ga0070716_100015955 3300006173 Bacteria 3870
40 Ga0075367_10099045 3300006178 Bacteria 1780
41 Ga0075370_10027957 3300006353 Bacteria 3132
42 Ga0068871_100091477 3300006358 Bacteria 2536
43 Ga0068865_100029154 3300006881 Bacteria 3659
44 Ga0075436_100207895 3300006914 Bacteria 1387
45 Ga0097620_100123585 3300006931 Bacteria 2655
46 Ga0099824_1022780 3300006942 Bacteria 4042
47 Ga0105240_10066540 3300009093 Bacteria 4469
48 Ga0105240_10074287 3300009093 Bacteria 4197
49 Ga0105247_10008375 3300009101 Bacteria 6304
50 Ga0105247_10033882 3300009101 Bacteria 3109
51 Ga0105248_10262312 3300009177 Bacteria 1945
52 Ga0105237_10009143 3300009545 Bacteria 10644
53 Ga0105237_10251984 3300009545 Bacteria 1768
54 Ga0105238_10224542 3300009551 Bacteria 1855
55 Ga0105239_10068579 3300010375 Bacteria 3898
56 Ga0105239_10207991 3300010375 Bacteria 2193
57 Ga0157369_10019556 3300013105 Bacteria 7577
58 Ga0163162_10026924 3300013306 Bacteria 5686
59 Ga0157375_10029227 3300013308 Bacteria 5181
60 Ga0163163_10020924 3300014325 Bacteria 6169
61 Ga0163163_10077915 3300014325 Bacteria 3310
62 Ga0157380_10077452 3300014326 Bacteria 2710
63 Ga0157376_10022623 3300014969 Bacteria 4904
64 Ga0213876_10000691 3300021384 Bacteria 23782
65 Ga0213876_10031452 3300021384 Bacteria 2801
66 Ga0209677_103067 3300025253 Bacteria 5707
67 Ga0207692_10002649 3300025898 Bacteria 6887
68 Ga0207710_10084561 3300025900 Bacteria 1476
69 Ga0207680_10080247 3300025903 Bacteria 2048
70 Ga0207695_10097806 3300025913 Bacteria 2935
71 Ga0207671_10020733 3300025914 Bacteria 4999
72 Ga0207693_10018865 3300025915 Bacteria 5490
73 Ga0207663_10008765 3300025916 Bacteria 5312
74 Ga0207652_10015690 3300025921 Bacteria 6169
75 Ga0207694_10098357 3300025924 Bacteria 2316
76 Ga0207664_10014251 3300025929 Bacteria 5734
77 Ga0207644_10103364 3300025931 Bacteria 2144
78 Ga0207704_10037940 3300025938 Bacteria 2788
79 Ga0207665_10010480 3300025939 Bacteria 6090
80 Ga0207689_10039140 3300025942 Bacteria 3926
81 Ga0207661_10008455 3300025944 Bacteria 7358
82 Ga0207651_10043627 3300025960 Bacteria 2995
83 Ga0207640_10025827 3300025981 Bacteria 3560
84 Ga0207677_10015740 3300026023 Bacteria 4460
85 Ga0207639_10056278 3300026041 Bacteria 3014
86 Ga0207678_10089249 3300026067 Bacteria 2635
87 Ga0207641_10067649 3300026088 Bacteria 3061
88 Ga0207648_10083274 3300026089 Bacteria 2790
89 Ga0207683_10011682 3300026121 Bacteria 7497
90 Ga0207683_10045226 3300026121 Bacteria 3849
91 Ga0207683_10054227 3300026121 Bacteria 3515
92 Ga0207428_10127932 3300027907 Bacteria 1945
93 Ga0268266_10002176 3300028379 Bacteria 21461
94 Ga0268266_10036482 3300028379 Bacteria 4184
95 Ga0268266_10133359 3300028379 Bacteria 2223
96 Ga0268265_10046073 3300028380 Bacteria 3257
97 Ga0268264_10000162 3300028381 Bacteria 148472
98 Ga0265334_10024906 3300028573 Bacteria 2424
99 Ga0265318_10017886 3300028577 Bacteria 2902
100 Ga0265323_10004150 3300028653 Bacteria 6278
101 Ga0265336_10000852 3300028666 Bacteria 15879
102 Ga0265338_10001827 3300028800 Bacteria 33368
103 Ga0265332_10007283 3300031238 Bacteria 5005
104 Ga0307509_10094817 3300031507 Bacteria 3042
105 Ga0307509_10100073 3300031507 Bacteria 2938
106 Ga0307508_10000001 3300031616 Bacteria 553635
107 Ga0307508_10265712 3300031616 Bacteria 1310
108 Ga0307516_10137079 3300031730 Bacteria 2220
109 Ga0307516_10146562 3300031730 Bacteria 2126
110 Ga0307410_10127062 3300031852 Bacteria 1868
111 Ga0307507_10083317 3300033179 Bacteria 2797
112 Ga0315911_1000001 3300033442 Bacteria 1088602
113 Ga0373934_0001414 3300035086 Bacteria 8779
114 Ga0373923_0000560 3300035111 Bacteria 9120
115 Ga0373954_0000120 3300035118 Bacteria 26294
116 Ga0373956_0000606 3300035119 Bacteria 14697
117 Ga0373957_0002991 3300035120 Bacteria 4905
118 Ga0373955_0000523 3300035172 Bacteria 16357
119 Ga0373924_0002579 3300035410 Bacteria 6114
120 Ga0373927_0032550 3300035695 Bacteria 3396
121 Ga0373927_0093765 3300035695 Bacteria 1951
122 Ga0373937_0061301 3300036401 Bacteria 3457
123 Ga0373937_0107597 3300036401 Bacteria 2592
124 Ga0436365_1287450 3300039437 Bacteria 31473
125 Ga0436365_1297727 3300039437 Bacteria 3519
126 Ga0466963_0034765 3300044694 Bacteria 3281
127 Ga0466971_0095378 3300044719 Bacteria 1364
128 Ga0466959_0024912 3300045049 Bacteria 4432
129 Ga0466959_0116126 3300045049 Bacteria 1906
130 Ga0495592_0015543 3300046454 Bacteria 5775
131 Ga0495629_0000274 3300046459 Bacteria 44731
132 Ga0495651_0005704 3300046462 Bacteria 9487
133 Ga0495653_0002814 3300046463 Bacteria 13889
134 Ga0495664_0145695 3300046477 Bacteria 1436
135 Ga0495606_0097300 3300046507 Bacteria 1799
136 Ga0495628_0022404 3300046516 Bacteria 5188
137 Ga0495648_0003469 3300046524 Bacteria 13859
138 Ga0495652_0124012 3300046529 Bacteria 2055
139 Ga0495640_0030158 3300046533 Bacteria 3886
140 Ga0495645_0008321 3300046543 Bacteria 7240
141 Ga0495645_0045588 3300046543 Bacteria 3199
142 Ga0495667_0002629 3300046559 Bacteria 11991
143 Ga0495634_0030305 3300046642 Bacteria 3738
144 Ga0495634_0032801 3300046642 Bacteria 3569
145 Ga0495635_0001084 3300046663 Bacteria 18056
146 Ga0495657_0030538 3300046675 Bacteria 3772
147 Ga0495623_0050022 3300046679 Bacteria 2648
148 Ga0495646_0006670 3300046680 Bacteria 7317
149 Ga0495646_0039248 3300046680 Bacteria 2920
150 Ga0495613_0036092 3300046689 Bacteria 3665
151 Ga0495600_0001457 3300046809 Bacteria 13120
152 Ga0495581_0028259 3300047315 Bacteria 3252
153 Ga0495604_0003984 3300047317 Bacteria 11745
154 Ga0495684_0000202 3300047471 Bacteria 45900
155 Ga0495593_0009364 3300047673 Bacteria 5683
156 Ga0495602_0039919 3300048088 Bacteria 4314
157 Ga0496102_0017489 3300048905 Bacteria 6279
158 Ga0496103_0020749 3300048906 Bacteria 3950
159 Ga0496104_0109646 3300048907 Bacteria 2645
160 Ga0496106_0013943 3300048909 Bacteria 5943
161 Ga0496106_0031418 3300048909 Bacteria 3957
162 Ga0496106_0134842 3300048909 Bacteria 1938
163 Ga0496106_0135080 3300048909 Bacteria 1937
164 Ga0496107_0007934 3300048910 Bacteria 7327
165 Ga0496108_0001866 3300048911 Bacteria 16861
166 Ga0496108_0077683 3300048911 Bacteria 2808
167 Ga0496109_0000802 3300048912 Bacteria 26181
168 Ga0496109_0007880 3300048912 Bacteria 9027
169 Ga0496110_0046524 3300048913 Bacteria 3796
170 Ga0496110_0136213 3300048913 Bacteria 2219
171 Ga0496110_0311119 3300048913 Bacteria 1434
172 Ga0496112_0036940 3300048915 Bacteria 4767
173 Ga0496112_0084819 3300048915 Bacteria 3133
174 Ga0496113_0013572 3300048916 Bacteria 5526
175 Ga0496114_0003042 3300048917 Bacteria 12846
176 Ga0496115_0001029 3300048918 Bacteria 20257
177 Ga0496115_0044662 3300048918 Bacteria 3536
178 Ga0496115_0153160 3300048918 Bacteria 1904
179 Ga0496118_0087467 3300048921 Bacteria 2161
180 Ga0496118_0133106 3300048921 Bacteria 1592
181 Ga0496121_0000302 3300048924 Bacteria 102347
182 Ga0496121_0088940 3300048924 Bacteria 2419
183 Ga0496121_0236880 3300048924 Bacteria 1274
184 Ga0496124_0003179 3300048927 Bacteria 20302
185 Ga0496124_0139795 3300048927 Bacteria 1912
186 Ga0496125_0000731 3300048928 Bacteria 54449
187 Ga0496125_0002135 3300048928 Bacteria 26549
188 Ga0496125_0068219 3300048928 Bacteria 2799
189 Ga0496125_0084215 3300048928 Bacteria 2415
190 Ga0496126_0019424 3300048929 Bacteria 6691
191 Ga0496126_0042229 3300048929 Bacteria 4212
192 Ga0496126_0055462 3300048929 Bacteria 3585
193 Ga0496126_0116747 3300048929 Bacteria 2319
194 Ga0496126_0122816 3300048929 Bacteria 2250
195 Ga0501046_0032895 3300049580 Bacteria 4196
196 Ga0501047_0024543 3300049581 Bacteria 5786
197 Ga0501073_0055092 3300049589 Bacteria 2783
198 Ga0501074_0033543 3300049590 Bacteria 3721
199 Ga0501080_0095504 3300049742 Bacteria 2760
200 Ga0501044_0071519 3300049823 Bacteria 3527
201 nmdc:mga00v17_57688_c1 3300050491 Bacteria 2376
202 nmdc:mga0yw44_547_c1 3300050492 Bacteria 13523
203 nmdc:mga0k408_29888_c1 3300050493 Bacteria 3104
204 nmdc:mga06z11_17411_c1 3300050494 Bacteria 3260
205 nmdc:mga06z11_31395_c1 3300050494 Bacteria 2580
206 nmdc:mga07m45_5864_c1 3300050496 Bacteria 6165
207 nmdc:mga08y16_151360_c1 3300050511 Bacteria 2411
208 nmdc:mga08x19_184896_c1 3300050514 Bacteria 1424
209 nmdc:mga08x19_63583_c1 3300050514 Bacteria 2394
210 Ga0495601_0112390 3300053077 Bacteria 1765
211 Ga0495619_0002050 3300053085 Bacteria 13379
212 Ga0500647_0023970 3300053091 Bacteria 2867
213 Ga0500566_0000124 3300053094 Bacteria 40031
214 Ga0500640_004607 3300053095 Bacteria 5030
215 Ga0500572_000207 3300053111 Bacteria 20845
216 Ga0500572_000292 3300053111 Bacteria 17937
217 Ga0500595_021492 3300053119 Bacteria 2301
218 Ga0500608_068493 3300053122 Bacteria 1690
219 Ga0500614_001443 3300053123 Bacteria 5688
220 Ga0500559_0000374 3300053136 Bacteria 32977
221 Ga0500559_0000658 3300053136 Bacteria 23226
222 Ga0500568_0005917 3300053139 Bacteria 6226
223 Ga0500577_0000958 3300053142 Bacteria 7457
224 Ga0500603_000069 3300053150 Bacteria 24202
225 Ga0500630_024902 3300053159 Bacteria 2955
226 Ga0500638_073603 3300053162 Bacteria 1630
227 Ga0500639_000115 3300053163 Bacteria 38497
228 Ga0500639_026164 3300053163 Bacteria 3083
229 Ga0500637_0102615 3300053178 Bacteria 1658
230 Ga0500637_0113318 3300053178 Bacteria 1573
231 Ga0500596_000919 3300053735 Bacteria 5883
232 Ga0500601_005405 3300053737 Bacteria 1397
233 2509154193 2508501128 Bacteria 8613869
234 2513654440 2513237096 Bacteria 8722461
235 2513915381 2513237145 Bacteria 8979722
236 2517892690 2517572143 Bacteria 9484767
237 2524464549 2524023210 Bacteria 9029266
238 2793068302 2791355197 Bacteria 8420563
239 2793082656
240 2876809666 2876808645 Bacteria 8824342
241 2879118255 2879110137 Bacteria 8907982
242 2906641477 2906635258 Bacteria 8601019
243 2906664382 2906660503 Bacteria 8595048
244 8006941025 8006933436 Bacteria 10410654
245 8006980774 8006973647 Bacteria 10679141
246 8056674254 8056673599 Bacteria 7871253
247 8056689946 8056689827 Bacteria 6712655
248 Ga0496100_0117863
249 Ga0070683_100042082
250 Ga0068868_100007627
251 Ga0070660_100239977
252 Ga0070668_100077382
253 Ga0070669_100034354
254 Ga0070671_100091613
255 Ga0070709_10000247
256 Ga0070713_100044808
257 Ga0070710_10005602
258 Ga0070711_100007158
259 Ga0070663_100095906
260 Ga0070663_100137862
261 Ga0070678_100023019
262 Ga0070707_100133360
263 Ga0070698_100310437
264 Ga0070699_100268541
265 Ga0070684_100036598
266 Ga0070697_100138299
267 Ga0070665_100081462
268 Ga0068855_100197365
269 Ga0068854_100065491
270 Ga0068859_100123586
271 Ga0068864_100122432
272 Ga0068863_100091624
273 Ga0068860_100002958
274 Ga0068862_100057243
275 Ga0068862_100071465
276 Ga0081455_10007659
277 Ga0081455_10024054
278 Ga0081538_10030450
279 Ga0081538_10064940
280 Ga0081539_10042978
281 Ga0075365_10006445
282 Ga0075365_10083141
283 Ga0075363_100015315
284 Ga0075364_10094244
285 Ga0070715_10010565
286 Ga0070716_100015955
287 Ga0075367_10099045
288 Ga0075370_10027957
289 Ga0068871_100091477
290 Ga0068865_100029154
291 Ga0075436_100207895
292 Ga0097620_100123585
293 Ga0099824_1022780
294 Ga0105240_10066540
295 Ga0105240_10074287
296 Ga0105247_10008375
297 Ga0105247_10033882
298 Ga0105248_10262312
299 Ga0105237_10009143
300 Ga0105237_10251984
301 Ga0105238_10224542
302 Ga0105239_10068579
303 Ga0105239_10207991
304 Ga0157369_10019556
305 Ga0163162_10026924
306 Ga0157375_10029227
307 Ga0163163_10020924
308 Ga0163163_10077915
309 Ga0157380_10077452
310 Ga0157376_10022623
311 Ga0213876_10000691
312 Ga0213876_10031452
313 Ga0209677_103067
314 Ga0207692_10002649
315 Ga0207710_10084561
316 Ga0207680_10080247
317 Ga0207695_10097806
318 Ga0207671_10020733
319 Ga0207693_10018865
320 Ga0207663_10008765
321 Ga0207652_10015690
322 Ga0207694_10098357
323 Ga0207664_10014251
324 Ga0207644_10103364
325 Ga0207704_10037940
326 Ga0207665_10010480
327 Ga0207689_10039140
328 Ga0207661_10008455
329 Ga0207651_10043627
330 Ga0207640_10025827
331 Ga0207677_10015740
332 Ga0207639_10056278
333 Ga0207678_10089249
334 Ga0207641_10067649
335 Ga0207648_10083274
336 Ga0207683_10011682
337 Ga0207683_10045226
338 Ga0207683_10054227
339 Ga0207428_10127932
340 Ga0268266_10002176
341 Ga0268266_10036482
342 Ga0268266_10133359
343 Ga0268265_10046073
344 Ga0268264_10000162
345 Ga0265334_10024906
346 Ga0265318_10017886
347 Ga0265323_10004150
348 Ga0265336_10000852
349 Ga0265338_10001827
350 Ga0265332_10007283
351 Ga0307509_10094817
352 Ga0307509_10100073
353 Ga0307508_10000001
354 Ga0307508_10265712
355 Ga0307516_10137079
356 Ga0307516_10146562
357 Ga0307410_10127062
358 Ga0307507_10083317
359 Ga0315911_1000001
360 Ga0373934_0001414
361 Ga0373923_0000560
362 Ga0373954_0000120
363 Ga0373956_0000606
364 Ga0373957_0002991
365 Ga0373955_0000523
366 Ga0373924_0002579
367 Ga0373927_0032550
368 Ga0373927_0093765
369 Ga0373937_0061301
370 Ga0373937_0107597
371 Ga0436365_1287450
372 Ga0436365_1297727
373 Ga0466963_0034765
374 Ga0466971_0095378
375 Ga0466959_0024912
376 Ga0466959_0116126
377 Ga0495592_0015543
378 Ga0495629_0000274
379 Ga0495651_0005704
380 Ga0495653_0002814
381 Ga0495664_0145695
382 Ga0495606_0097300
383 Ga0495628_0022404
384 Ga0495648_0003469
385 Ga0495652_0124012
386 Ga0495640_0030158
387 Ga0495645_0008321
388 Ga0495645_0045588
389 Ga0495667_0002629
390 Ga0495634_0030305
391 Ga0495634_0032801
392 Ga0495635_0001084
393 Ga0495657_0030538
394 Ga0495623_0050022
395 Ga0495646_0006670
396 Ga0495646_0039248
397 Ga0495613_0036092
398 Ga0495600_0001457
399 Ga0495581_0028259
400 Ga0495604_0003984
401 Ga0495684_0000202
402 Ga0495593_0009364
403 Ga0495602_0039919
404 Ga0496102_0017489
405 Ga0496103_0020749
406 Ga0496104_0109646
407 Ga0496106_0013943
408 Ga0496106_0031418
409 Ga0496106_0134842
410 Ga0496106_0135080
411 Ga0496107_0007934
412 Ga0496108_0001866
413 Ga0496108_0077683
414 Ga0496109_0000802
415 Ga0496109_0007880
416 Ga0496110_0046524
417 Ga0496110_0136213
418 Ga0496110_0311119
419 Ga0496112_0036940
420 Ga0496112_0084819
421 Ga0496113_0013572
422 Ga0496114_0003042
423 Ga0496115_0001029
424 Ga0496115_0044662
425 Ga0496115_0153160
426 Ga0496118_0087467
427 Ga0496118_0133106
428 Ga0496121_0000302
429 Ga0496121_0088940
430 Ga0496121_0236880
431 Ga0496124_0003179
432 Ga0496124_0139795
433 Ga0496125_0000731
434 Ga0496125_0002135
435 Ga0496125_0068219
436 Ga0496125_0084215
437 Ga0496126_0019424
438 Ga0496126_0042229
439 Ga0496126_0055462
440 Ga0496126_0116747
441 Ga0496126_0122816
442 Ga0501046_0032895
443 Ga0501047_0024543
444 Ga0501073_0055092
445 Ga0501074_0033543
446 Ga0501080_0095504
447 Ga0501044_0071519
448 nmdc:mga00v17_57688_c1
449 nmdc:mga0yw44_547_c1
450 nmdc:mga0k408_29888_c1
451 nmdc:mga06z11_17411_c1
452 nmdc:mga06z11_31395_c1
453 nmdc:mga07m45_5864_c1
454 nmdc:mga08y16_151360_c1
455 nmdc:mga08x19_184896_c1
456 nmdc:mga08x19_63583_c1
457 Ga0495601_0112390
458 Ga0495619_0002050
459 Ga0500647_0023970
460 Ga0500566_0000124
461 Ga0500640_004607
462 Ga0500572_000207
463 Ga0500572_000292
464 Ga0500595_021492
465 Ga0500608_068493
466 Ga0500614_001443
467 Ga0500559_0000374
468 Ga0500559_0000658
469 Ga0500568_0005917
470 Ga0500577_0000958
471 Ga0500603_000069
472 Ga0500630_024902
473 Ga0500638_073603
474 Ga0500639_000115
475 Ga0500639_026164
476 Ga0500637_0102615
477 Ga0500637_0113318
478 Ga0500596_000919
479 Ga0500601_005405
480 2509154193
481 2513654440
482 2513915381
483 2517892690
484 2524464549
485 2793068302
486 2793082656
487 2876809666
488 2879118255
489 2906641477
490 2906664382
491 8006941025
492 8006980774
493 8056674254
494 8056689946

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i5b-assembly2.cif.gz_B crystal structure of the isolated ggdef domain of wpsr from pseudomonas aeruginosa 0.8837 273 402
3ign-assembly1.cif.gz_A crystal structure of the ggdef domain from marinobacter aquaeolei diguanylate cyclase complexed with c-di-gmp - northeast structural genomics consortium target mqr89a 0.8794 270 402
6hbz-assembly1.cif.gz_A bdellovibrio bacteriovorus dgcb full-length 0.8611 284 402
3hva-assembly2.cif.gz_B crystal structure of fimx ggdef domain from pseudomonas aeruginosa 0.8373 272 402
3grc-assembly5.cif.gz_C crystal structure of a sensor protein from polaromonas sp. js666 0.8127 143 254
ID Description Score Start End Superfamily
3i5cB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8475 273 402 3.30.70.270
6eibC00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8446 287 402 3.30.70.270
3hvaB00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8373 272 402 3.30.70.270
af_P77334_235_407_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8041 270 401 3.30.70.270
2v0nA03 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.7978 272 402 3.30.70.270
ID Description Score Start End GO Terms
AF-A0A2S6M6Y4-F1-model_v4 GGDEF domain-containing protein 0.962 1 368
AF-A0A2S6M6Y4-F1-model_v4 GGDEF domain-containing protein 0.9595 1 368
AF-A0A3S0HU08-F1-model_v4 deleted 0.9504 1 301
AF-A0A5D3KJD8-F1-model_v4 GGDEF domain-containing protein 0.9432 1 409
AF-A0A5D3KJD8-F1-model_v4 GGDEF domain-containing protein 0.9409 1 409

Map