F358937

General Info

Members Datasets Scaffolds Average Seq Length
247 144 494 322

Family's Representative Sequence

Representative Sequence 3300007788|Ga0099795_10014482|Ga0099795_100144822
Length 375
Sequence MMTFQCAVKTARLTNSDITNLQASRARSRFQPFKSIRWNCYDALSGSRADMRRREFLGFLSGAAVALPLTARAQQSAIPVIGFLNGSSSEGYAPRVAAFRQGLQQAGYVEGRNVAIEFRWAEGHYDRLPEMAADLAGRQVSVIVANTPANLIAKAAINTIPIVFTTSSDPVQIGLVPSMNRPGGNVTGVSQLNVEVGPKRLELAHELMPSETDMALLVNTNNPIAVTIEKGMQLAATSLGLRLHVISASNDAEVESAFAGFARLKAGVLVIGTDAFFNGLIERLATLATRYAVPTIYQYNEFTAAGGLMSYGGSVNDSYHLAGIYTGRILKGEKPADLPVQQSTKVELLVNLKTAKTLGLTVPQSILGRADEVIE

Samples

Sample ID Description Type Environment
1 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
33 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
92 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
93 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
94 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
95 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
96 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
103 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
104 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
108 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
112 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
115 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
132 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
133 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
141 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.4
Nodule 0.4
Rhizoplane 22.27
Rhizosphere 76.92
Stem 0
Stem Tuber 0
Unclassified 8.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099795_10014482 3300007788 Bacteria 2447
2 Ga0070683_100103427 3300005329 Bacteria 2684
3 Ga0070670_100023622 3300005331 Bacteria 5291
4 Ga0070680_100143253 3300005336 Bacteria 2004
5 Ga0070680_100148245 3300005336 Bacteria 1969
6 Ga0070680_100159550 3300005336 Bacteria 1895
7 Ga0070682_100303645 3300005337 Unclassified 1172
8 Ga0070660_100130958 3300005339 Bacteria 2007
9 Ga0070671_100062079 3300005355 Bacteria 3112
10 Ga0070674_100270050 3300005356 Bacteria 1344
11 Ga0070673_100235055 3300005364 Bacteria 1591
12 Ga0070714_100015710 3300005435 Bacteria 6097
13 Ga0070714_100052700 3300005435 Bacteria 3471
14 Ga0070713_100016677 3300005436 Bacteria 5527
15 Ga0070711_100008506 3300005439 Bacteria 6289
16 Ga0070711_100194803 3300005439 Bacteria 1560
17 Ga0070663_100022417 3300005455 Bacteria 4222
18 Ga0070678_100015815 3300005456 Bacteria 4807
19 Ga0070681_10009040 3300005458 Bacteria 9791
20 Ga0070681_10049414 3300005458 Bacteria 4200
21 Ga0070681_10055005 3300005458 Bacteria 3964
22 Ga0070681_10175578 3300005458 Bacteria 2064
23 Ga0070706_100055256 3300005467 Bacteria 3665
24 Ga0070707_100008247 3300005468 Bacteria 9667
25 Ga0070707_100411543 3300005468 Bacteria 1313
26 Ga0070698_100308445 3300005471 Bacteria 1513
27 Ga0070699_100142374 3300005518 Bacteria 2118
28 Ga0070699_100185080 3300005518 Bacteria 1849
29 Ga0070679_100038414 3300005530 Bacteria 4760
30 Ga0070679_100081322 3300005530 Bacteria 3228
31 Ga0070679_100097024 3300005530 Bacteria 2935
32 Ga0070684_100031374 3300005535 Bacteria 4523
33 Ga0070684_100064202 3300005535 Bacteria 3220
34 Ga0070697_100310693 3300005536 Bacteria 1356
35 Ga0070697_100519306 3300005536 Bacteria 1042
36 Ga0068853_100040926 3300005539 Bacteria 3956
37 Ga0070672_100034895 3300005543 Unclassified 3820
38 Ga0070672_100172821 3300005543 Bacteria 1797
39 Ga0070672_100216956 3300005543 Bacteria 1604
40 Ga0070696_100243760 3300005546 Bacteria 1357
41 Ga0070693_100187731 3300005547 Bacteria 1335
42 Ga0068856_100633179 3300005614 Bacteria 1090
43 Ga0068864_100106399 3300005618 Bacteria 2494
44 Ga0068864_100136568 3300005618 Bacteria 2208
45 Ga0068851_10005323 3300005834 Bacteria 5842
46 Ga0068862_100008985 3300005844 Bacteria 8275
47 Ga0081455_10016524 3300005937 Bacteria 7121
48 Ga0081455_10056196 3300005937 Bacteria 3344
49 Ga0081455_10295389 3300005937 Bacteria 1165
50 Ga0081538_10025433 3300005981 Bacteria 4173
51 Ga0081540_1072901 3300005983 Bacteria 1580
52 Ga0081539_10014952 3300005985 Bacteria 5691
53 Ga0070712_100239208 3300006175 Bacteria 1446
54 Ga0070712_100283318 3300006175 Bacteria 1335
55 Ga0097621_100061355 3300006237 Bacteria 3084
56 Ga0097621_100329462 3300006237 Bacteria 1354
57 Ga0068871_100388432 3300006358 Bacteria 1241
58 Ga0075428_100089505 3300006844 Bacteria 3357
59 Ga0075430_100002635 3300006846 Bacteria 14980
60 Ga0075430_100051102 3300006846 Unclassified 3484
61 Ga0075430_100221333 3300006846 Unclassified 1570
62 Ga0075433_10034550 3300006852 Bacteria 4343
63 Ga0075434_100074173 3300006871 Bacteria 3396
64 Ga0075434_100208808 3300006871 Bacteria 1973
65 Ga0075434_100269061 3300006871 Bacteria 1724
66 Ga0075429_100020204 3300006880 Bacteria 5775
67 Ga0075435_100028791 3300007076 Bacteria 4358
68 Ga0075435_100188585 3300007076 Unclassified 1744
69 Ga0075435_100378400 3300007076 Unclassified 1216
70 Ga0099794_10025369 3300007265 Bacteria 2730
71 Ga0105240_10050544 3300009093 Bacteria 5240
72 Ga0105240_10172588 3300009093 Bacteria 2559
73 Ga0111539_10023626 3300009094 Bacteria 7554
74 Ga0105245_10012692 3300009098 Bacteria 7335
75 Ga0105247_10127953 3300009101 Bacteria 1653
76 Ga0114129_10010293 3300009147 Bacteria 13344
77 Ga0114129_10091940 3300009147 Bacteria 4203
78 Ga0114129_10107110 3300009147 Bacteria 3861
79 Ga0105243_10236270 3300009148 Bacteria 1624
80 Ga0105243_10322522 3300009148 Bacteria 1408
81 Ga0105241_10108250 3300009174 Bacteria 2221
82 Ga0105242_10050840 3300009176 Bacteria 3376
83 Ga0105242_10118935 3300009176 Bacteria 2264
84 Ga0105248_10015296 3300009177 Bacteria 8460
85 Ga0105238_10036311 3300009551 Bacteria 5009
86 Ga0105239_10042725 3300010375 Bacteria 4967
87 Ga0105239_10688115 3300010375 Bacteria 1169
88 Ga0105246_10026911 3300011119 Bacteria 3763
89 Ga0105246_10034517 3300011119 Bacteria 3372
90 Ga0157374_10035771 3300013296 Bacteria 4545
91 Ga0157374_10088611 3300013296 Bacteria 2948
92 Ga0157378_10156890 3300013297 Bacteria 2125
93 Ga0163162_10024125 3300013306 Bacteria 6003
94 Ga0163162_10051650 3300013306 Bacteria 4125
95 Ga0163162_10314017 3300013306 Bacteria 1700
96 Ga0157372_10430094 3300013307 Bacteria 1538
97 Ga0157375_10013598 3300013308 Bacteria 7251
98 Ga0163163_10061522 3300014325 Bacteria 3720
99 Ga0207685_10088978 3300025905 Unclassified 1295
100 Ga0207684_10134053 3300025910 Bacteria 2126
101 Ga0207684_10331045 3300025910 Bacteria 1312
102 Ga0207654_10041209 3300025911 Bacteria 2606
103 Ga0207707_10000507 3300025912 Bacteria 40006
104 Ga0207707_10058446 3300025912 Bacteria 3356
105 Ga0207707_10284507 3300025912 Bacteria 1431
106 Ga0207695_10095235 3300025913 Bacteria 2982
107 Ga0207693_10353847 3300025915 Bacteria 1149
108 Ga0207663_10074044 3300025916 Bacteria 2206
109 Ga0207660_10113704 3300025917 Bacteria 2041
110 Ga0207660_10146926 3300025917 Bacteria 1808
111 Ga0207657_10163409 3300025919 Bacteria 1807
112 Ga0207652_10050802 3300025921 Bacteria 3553
113 Ga0207646_10024139 3300025922 Bacteria 5573
114 Ga0207650_10108237 3300025925 Bacteria 2148
115 Ga0207687_10047895 3300025927 Bacteria 2965
116 Ga0207700_10063610 3300025928 Bacteria 2807
117 Ga0207664_10222400 3300025929 Bacteria 1638
118 Ga0207644_10160246 3300025931 Bacteria 1748
119 Ga0207686_10069139 3300025934 Bacteria 2265
120 Ga0207686_10098329 3300025934 Bacteria 1948
121 Ga0207709_10165516 3300025935 Bacteria 1546
122 Ga0207691_10047124 3300025940 Bacteria 3957
123 Ga0207711_10009127 3300025941 Bacteria 8280
124 Ga0207711_10022458 3300025941 Bacteria 5275
125 Ga0207661_10004250 3300025944 Bacteria 10026
126 Ga0207661_10186745 3300025944 Bacteria 1814
127 Ga0207667_10010279 3300025949 Bacteria 10953
128 Ga0207667_10173964 3300025949 Bacteria 2212
129 Ga0207640_10069642 3300025981 Bacteria 2363
130 Ga0207677_10007318 3300026023 Bacteria 6096
131 Ga0207639_10120058 3300026041 Bacteria 2158
132 Ga0207648_10154046 3300026089 Bacteria 2028
133 Ga0207676_10028602 3300026095 Bacteria 4165
134 Ga0207676_10037309 3300026095 Bacteria 3703
135 Ga0207683_10010329 3300026121 Bacteria 7963
136 Ga0373936_0032746 3300035113 Bacteria 2057
137 Ga0373954_0014008 3300035118 Bacteria 3574
138 Ga0373946_0180835 3300035171 Unclassified 1001
139 Ga0373955_0091626 3300035172 Unclassified 1733
140 Ga0373931_0002965 3300035691 Bacteria 7577
141 Ga0373935_0120312 3300035692 Bacteria 1753
142 Ga0373927_0004327 3300035695 Bacteria 9957
143 Ga0373927_0068222 3300035695 Bacteria 2301
144 Ga0373927_0081294 3300035695 Unclassified 2100
145 Ga0373927_0134160 3300035695 Bacteria 1618
146 Ga0373947_0047464 3300035725 Bacteria 2573
147 Ga0373947_0244548 3300035725 Bacteria 1185
148 Ga0373937_0325676 3300036401 Bacteria 1454
149 Ga0373925_0363054 3300037068 Unclassified 1177
150 Ga0395898_0213938 3300037466 Bacteria 1839
151 Ga0436360_0232841 3300039438 Bacteria 1772
152 Ga0439460_0040152 3300042461 Bacteria 1370
153 Ga0466966_0204288 3300044684 Unclassified 1195
154 Ga0451576_0134714 3300045051 Bacteria 2576
155 Ga0451576_0336861 3300045051 Bacteria 1579
156 Ga0466967_0053967 3300045976 Bacteria 3535
157 Ga0495580_0195034 3300046472 Bacteria 1396
158 Ga0495664_0023641 3300046477 Bacteria 3567
159 Ga0495664_0026251 3300046477 Bacteria 3393
160 Ga0495586_0181781 3300046535 Bacteria 1190
161 Ga0495645_0088806 3300046543 Bacteria 2210
162 Ga0495645_0093351 3300046543 Bacteria 2148
163 Ga0495659_0056721 3300046664 Unclassified 1438
164 Ga0495599_0238513 3300046678 Bacteria 1109
165 Ga0495674_0357422 3300047319 Bacteria 1185
166 Ga0495615_0056360 3300048090 Bacteria 1026
167 Ga0496100_0003516 3300048903 Bacteria 8181
168 Ga0496100_0004388 3300048903 Bacteria 7470
169 Ga0496100_0021284 3300048903 Bacteria 3903
170 Ga0496100_0065894 3300048903 Bacteria 2401
171 Ga0496101_0015688 3300048904 Bacteria 5112
172 Ga0496101_0023441 3300048904 Bacteria 4264
173 Ga0496101_0133141 3300048904 Unclassified 1889
174 Ga0496101_0134416 3300048904 Bacteria 1881
175 Ga0496102_0007445 3300048905 Bacteria 9354
176 Ga0496102_0023126 3300048905 Bacteria 5515
177 Ga0496102_0052709 3300048905 Bacteria 3708
178 Ga0496102_0411705 3300048905 Bacteria 1270
179 Ga0496103_0029851 3300048906 Bacteria 3315
180 Ga0496103_0180891 3300048906 Bacteria 1355
181 Ga0496104_0030269 3300048907 Bacteria 5029
182 Ga0496104_0031626 3300048907 Bacteria 4922
183 Ga0496104_0198226 3300048907 Bacteria 1919
184 Ga0496104_0461594 3300048907 Bacteria 1181
185 Ga0496104_0544135 3300048907 Unclassified 1072
186 Ga0496105_0016500 3300048908 Bacteria 5897
187 Ga0496105_0018552 3300048908 Bacteria 5597
188 Ga0496105_0026046 3300048908 Bacteria 4766
189 Ga0496105_0047454 3300048908 Bacteria 3544
190 Ga0496106_0017163 3300048909 Bacteria 5359
191 Ga0496106_0022975 3300048909 Bacteria 4632
192 Ga0496106_0039335 3300048909 Bacteria 3542
193 Ga0496106_0245870 3300048909 Bacteria 1430
194 Ga0496107_0002052 3300048910 Bacteria 12878
195 Ga0496107_0017114 3300048910 Bacteria 5097
196 Ga0496107_0053444 3300048910 Bacteria 2914
197 Ga0496108_0039113 3300048911 Bacteria 3954
198 Ga0496108_0122569 3300048911 Bacteria 2230
199 Ga0496108_0253759 3300048911 Bacteria 1530
200 Ga0496109_0025024 3300048912 Bacteria 5315
201 Ga0496109_0137700 3300048912 Bacteria 2282
202 Ga0496109_0530704 3300048912 Bacteria 1111
203 Ga0496110_0003787 3300048913 Bacteria 11653
204 Ga0496110_0035423 3300048913 Bacteria 4329
205 Ga0496110_0082501 3300048913 Bacteria 2867
206 Ga0496110_0092021 3300048913 Bacteria 2713
207 Ga0496111_0001999 3300048914 Bacteria 12130
208 Ga0496111_0015187 3300048914 Bacteria 5279
209 Ga0496111_0021303 3300048914 Bacteria 4524
210 Ga0496112_0036880 3300048915 Bacteria 4769
211 Ga0496112_0166041 3300048915 Bacteria 2173
212 Ga0496113_0013254 3300048916 Bacteria 5577
213 Ga0496113_0092781 3300048916 Bacteria 2329
214 Ga0496113_0479758 3300048916 Bacteria 999
215 Ga0496114_0010000 3300048917 Bacteria 7541
216 Ga0496114_0010244 3300048917 Bacteria 7459
217 Ga0496114_0019446 3300048917 Bacteria 5502
218 Ga0496115_0000999 3300048918 Bacteria 20514
219 Ga0496115_0005667 3300048918 Bacteria 9087
220 Ga0496115_0013775 3300048918 Bacteria 6122
221 Ga0496115_0025089 3300048918 Bacteria 4639
222 Ga0501071_0011647 3300049587 Bacteria 5935
223 Ga0501072_0005518 3300049588 Bacteria 9626
224 nmdc:mga0yw44_303521_c1 3300050492 Bacteria 1070
225 nmdc:mga05p37_114580_c1 3300050507 Bacteria 3314
226 nmdc:mga05p37_139549_c1 3300050507 Unclassified 2970
227 nmdc:mga05p37_405045_c1 3300050507 Bacteria 1592
228 nmdc:mga05p37_500037_c1 3300050507 Bacteria 1395
229 nmdc:mga05p37_55944_c1 3300050507 Bacteria 4856
230 nmdc:mga05p37_9020_c1 3300050507 Bacteria 11796
231 nmdc:mga09592_15262_c1 3300050508 Bacteria 6276
232 nmdc:mga09592_20750_c1 3300050508 Bacteria 5407
233 nmdc:mga0qj67_212499_c1 3300050509 Unclassified 1571
234 nmdc:mga0qj67_53035_c1 3300050509 Bacteria 3210
235 nmdc:mga0qj67_98351_c1 3300050509 Bacteria 2357
236 nmdc:mga06r32_14560_c1 3300050510 Bacteria 7140
237 nmdc:mga08y16_169588_c1 3300050511 Bacteria 2267
238 nmdc:mga0n895_312939_c1 3300050512 Unclassified 1591
239 nmdc:mga0n895_363078_c1 3300050512 Bacteria 1466
240 nmdc:mga0n895_534725_c1 3300050512 Bacteria 1179
241 nmdc:mga0n895_606442_c1 3300050512 Bacteria 1097
242 nmdc:mga0rr50_165970_c1 3300050513 Unclassified 1795
243 nmdc:mga0rr50_80626_c1 3300050513 Bacteria 2510
244 nmdc:mga08x19_253525_c1 3300050514 Bacteria 1215
245 nmdc:mga0a205_89042_c1 3300050515 Unclassified 2984
246 Ga0495601_0063187 3300053077 Bacteria 2353
247 2513887545 2513237141 Bacteria 8496279
248 Ga0099795_10014482
249 Ga0070683_100103427
250 Ga0070670_100023622
251 Ga0070680_100143253
252 Ga0070680_100148245
253 Ga0070680_100159550
254 Ga0070682_100303645
255 Ga0070660_100130958
256 Ga0070671_100062079
257 Ga0070674_100270050
258 Ga0070673_100235055
259 Ga0070714_100015710
260 Ga0070714_100052700
261 Ga0070713_100016677
262 Ga0070711_100008506
263 Ga0070711_100194803
264 Ga0070663_100022417
265 Ga0070678_100015815
266 Ga0070681_10009040
267 Ga0070681_10049414
268 Ga0070681_10055005
269 Ga0070681_10175578
270 Ga0070706_100055256
271 Ga0070707_100008247
272 Ga0070707_100411543
273 Ga0070698_100308445
274 Ga0070699_100142374
275 Ga0070699_100185080
276 Ga0070679_100038414
277 Ga0070679_100081322
278 Ga0070679_100097024
279 Ga0070684_100031374
280 Ga0070684_100064202
281 Ga0070697_100310693
282 Ga0070697_100519306
283 Ga0068853_100040926
284 Ga0070672_100034895
285 Ga0070672_100172821
286 Ga0070672_100216956
287 Ga0070696_100243760
288 Ga0070693_100187731
289 Ga0068856_100633179
290 Ga0068864_100106399
291 Ga0068864_100136568
292 Ga0068851_10005323
293 Ga0068862_100008985
294 Ga0081455_10016524
295 Ga0081455_10056196
296 Ga0081455_10295389
297 Ga0081538_10025433
298 Ga0081540_1072901
299 Ga0081539_10014952
300 Ga0070712_100239208
301 Ga0070712_100283318
302 Ga0097621_100061355
303 Ga0097621_100329462
304 Ga0068871_100388432
305 Ga0075428_100089505
306 Ga0075430_100002635
307 Ga0075430_100051102
308 Ga0075430_100221333
309 Ga0075433_10034550
310 Ga0075434_100074173
311 Ga0075434_100208808
312 Ga0075434_100269061
313 Ga0075429_100020204
314 Ga0075435_100028791
315 Ga0075435_100188585
316 Ga0075435_100378400
317 Ga0099794_10025369
318 Ga0105240_10050544
319 Ga0105240_10172588
320 Ga0111539_10023626
321 Ga0105245_10012692
322 Ga0105247_10127953
323 Ga0114129_10010293
324 Ga0114129_10091940
325 Ga0114129_10107110
326 Ga0105243_10236270
327 Ga0105243_10322522
328 Ga0105241_10108250
329 Ga0105242_10050840
330 Ga0105242_10118935
331 Ga0105248_10015296
332 Ga0105238_10036311
333 Ga0105239_10042725
334 Ga0105239_10688115
335 Ga0105246_10026911
336 Ga0105246_10034517
337 Ga0157374_10035771
338 Ga0157374_10088611
339 Ga0157378_10156890
340 Ga0163162_10024125
341 Ga0163162_10051650
342 Ga0163162_10314017
343 Ga0157372_10430094
344 Ga0157375_10013598
345 Ga0163163_10061522
346 Ga0207685_10088978
347 Ga0207684_10134053
348 Ga0207684_10331045
349 Ga0207654_10041209
350 Ga0207707_10000507
351 Ga0207707_10058446
352 Ga0207707_10284507
353 Ga0207695_10095235
354 Ga0207693_10353847
355 Ga0207663_10074044
356 Ga0207660_10113704
357 Ga0207660_10146926
358 Ga0207657_10163409
359 Ga0207652_10050802
360 Ga0207646_10024139
361 Ga0207650_10108237
362 Ga0207687_10047895
363 Ga0207700_10063610
364 Ga0207664_10222400
365 Ga0207644_10160246
366 Ga0207686_10069139
367 Ga0207686_10098329
368 Ga0207709_10165516
369 Ga0207691_10047124
370 Ga0207711_10009127
371 Ga0207711_10022458
372 Ga0207661_10004250
373 Ga0207661_10186745
374 Ga0207667_10010279
375 Ga0207667_10173964
376 Ga0207640_10069642
377 Ga0207677_10007318
378 Ga0207639_10120058
379 Ga0207648_10154046
380 Ga0207676_10028602
381 Ga0207676_10037309
382 Ga0207683_10010329
383 Ga0373936_0032746
384 Ga0373954_0014008
385 Ga0373946_0180835
386 Ga0373955_0091626
387 Ga0373931_0002965
388 Ga0373935_0120312
389 Ga0373927_0004327
390 Ga0373927_0068222
391 Ga0373927_0081294
392 Ga0373927_0134160
393 Ga0373947_0047464
394 Ga0373947_0244548
395 Ga0373937_0325676
396 Ga0373925_0363054
397 Ga0395898_0213938
398 Ga0436360_0232841
399 Ga0439460_0040152
400 Ga0466966_0204288
401 Ga0451576_0134714
402 Ga0451576_0336861
403 Ga0466967_0053967
404 Ga0495580_0195034
405 Ga0495664_0023641
406 Ga0495664_0026251
407 Ga0495586_0181781
408 Ga0495645_0088806
409 Ga0495645_0093351
410 Ga0495659_0056721
411 Ga0495599_0238513
412 Ga0495674_0357422
413 Ga0495615_0056360
414 Ga0496100_0003516
415 Ga0496100_0004388
416 Ga0496100_0021284
417 Ga0496100_0065894
418 Ga0496101_0015688
419 Ga0496101_0023441
420 Ga0496101_0133141
421 Ga0496101_0134416
422 Ga0496102_0007445
423 Ga0496102_0023126
424 Ga0496102_0052709
425 Ga0496102_0411705
426 Ga0496103_0029851
427 Ga0496103_0180891
428 Ga0496104_0030269
429 Ga0496104_0031626
430 Ga0496104_0198226
431 Ga0496104_0461594
432 Ga0496104_0544135
433 Ga0496105_0016500
434 Ga0496105_0018552
435 Ga0496105_0026046
436 Ga0496105_0047454
437 Ga0496106_0017163
438 Ga0496106_0022975
439 Ga0496106_0039335
440 Ga0496106_0245870
441 Ga0496107_0002052
442 Ga0496107_0017114
443 Ga0496107_0053444
444 Ga0496108_0039113
445 Ga0496108_0122569
446 Ga0496108_0253759
447 Ga0496109_0025024
448 Ga0496109_0137700
449 Ga0496109_0530704
450 Ga0496110_0003787
451 Ga0496110_0035423
452 Ga0496110_0082501
453 Ga0496110_0092021
454 Ga0496111_0001999
455 Ga0496111_0015187
456 Ga0496111_0021303
457 Ga0496112_0036880
458 Ga0496112_0166041
459 Ga0496113_0013254
460 Ga0496113_0092781
461 Ga0496113_0479758
462 Ga0496114_0010000
463 Ga0496114_0010244
464 Ga0496114_0019446
465 Ga0496115_0000999
466 Ga0496115_0005667
467 Ga0496115_0013775
468 Ga0496115_0025089
469 Ga0501071_0011647
470 Ga0501072_0005518
471 nmdc:mga0yw44_303521_c1
472 nmdc:mga05p37_114580_c1
473 nmdc:mga05p37_139549_c1
474 nmdc:mga05p37_405045_c1
475 nmdc:mga05p37_500037_c1
476 nmdc:mga05p37_55944_c1
477 nmdc:mga05p37_9020_c1
478 nmdc:mga09592_15262_c1
479 nmdc:mga09592_20750_c1
480 nmdc:mga0qj67_212499_c1
481 nmdc:mga0qj67_53035_c1
482 nmdc:mga0qj67_98351_c1
483 nmdc:mga06r32_14560_c1
484 nmdc:mga08y16_169588_c1
485 nmdc:mga0n895_312939_c1
486 nmdc:mga0n895_363078_c1
487 nmdc:mga0n895_534725_c1
488 nmdc:mga0n895_606442_c1
489 nmdc:mga0rr50_165970_c1
490 nmdc:mga0rr50_80626_c1
491 nmdc:mga08x19_253525_c1
492 nmdc:mga0a205_89042_c1
493 Ga0495601_0063187
494 2513887545

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04392

ABC_sub_bind

ABC transporter substrate binding protein

77

374

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lkv-assembly1.cif.gz_A-2 crystal structure of conserved domain protein from vibrio cholerae o1 biovar eltor str. n16961 0.9374 27 324
3lkv-assembly1.cif.gz_A-2 crystal structure of conserved domain protein from vibrio cholerae o1 biovar eltor str. n16961 0.9283 27 324
3lft-assembly1.cif.gz_A the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.9256 28 325
3lft-assembly2.cif.gz_B the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.9174 30 325
3lft-assembly1.cif.gz_A the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.9166 28 325
ID Description Score Start End Superfamily
3lkvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8692 148 324 3.40.50.2300
3lftA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8488 148 325 3.40.50.2300
3lkvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8472 148 324 3.40.50.2300
3lftA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8328 148 325 3.40.50.2300
3brsB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.7412 28 123 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A537H7S6-F1-model_v4 ABC transporter substrate-binding protein 0.9859 219 326
AF-A0A534TVN5-F1-model_v4 ABC transporter substrate-binding protein 0.9838 228 326
AF-A0A7V9HTZ8-F1-model_v4 ABC transporter substrate-binding protein 0.9818 220 326
AF-A0A2V6ZIS3-F1-model_v4 ABC transporter substrate-binding protein 0.9788 231 326
AF-A0A2V7I331-F1-model_v4 ABC transporter substrate-binding protein 0.9781 225 326

Map