F358910

General Info

Members Datasets Scaffolds Average Seq Length
247 157 246 304

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100099604|Ga0075428_1000996044
Length 354
Sequence LDRCPKDTAGGPAWIRLADEVAFPSPIAGIIVLQGGIFQGVFRALAARGEGMAAARRIICVGHAALDRIYRIEAFPPEPTKVRALEHIEAGGGMAANAAVAIARLGGRAELWSRTGDDAAGSSVRAGLQAERVDVRYLQAFEGARTSTSAIIVDRGGERLIVGQRDAGMPSGTSWLPLERVREADAVLGDLRWLEALRSVFARAKQESIPTVLDADLGAREALESILRLTDYAIFSAPALRELVPSGTDAERLAAVRAVGPGYAGVTLGPEGYLWRDQTETRRIPAFPVTVTDTTGAGDAFHGALTLFLAEGRPVADCARLASAVAAMKCTRLGSRSGLPNRAELAAFLATHGA

Samples

Sample ID Description Type Environment
1 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
75 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
76 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
77 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
78 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
79 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
80 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
81 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
82 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
83 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
84 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
91 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
92 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
93 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
94 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
95 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
96 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
102 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
124 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
125 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
126 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
127 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
135 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
136 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
137 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
138 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
139 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
140 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
148 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
151 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
152 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
153 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
154 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.17
Nodule 0
Rhizoplane 9.31
Rhizosphere 74.9
Stem 0
Stem Tuber 0
Unclassified 1.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10040179 3300003203 Bacteria 1661
2 rootL2_10172378 3300003322 Bacteria 1994
3 Ga0065704_10042847 3300005289 Bacteria 1044
4 Ga0070690_100003345 3300005330 Bacteria 8745
5 Ga0070680_100419361 3300005336 Unclassified 1142
6 Ga0070689_100280243 3300005340 Bacteria 1383
7 Ga0070691_10005519 3300005341 Bacteria 5757
8 Ga0070691_10037020 3300005341 Bacteria 2301
9 Ga0070669_100314225 3300005353 Bacteria 1264
10 Ga0070675_100014903 3300005354 Bacteria 6139
11 Ga0070659_100167522 3300005366 Bacteria 1798
12 Ga0070667_100476337 3300005367 Bacteria 1143
13 Ga0070703_10002070 3300005406 Bacteria 5849
14 Ga0070701_10007494 3300005438 Bacteria 4666
15 Ga0070701_10008299 3300005438 Unclassified 4487
16 Ga0070705_100000908 3300005440 Bacteria 16556
17 Ga0070700_100001322 3300005441 Bacteria 12291
18 Ga0070694_100000725 3300005444 Bacteria 18394
19 Ga0070708_100021118 3300005445 Bacteria 5499
20 Ga0070708_100182016 3300005445 Unclassified 1964
21 Ga0070663_100008353 3300005455 Bacteria 6362
22 Ga0070663_100016334 3300005455 Bacteria 4819
23 Ga0070698_100006306 3300005471 Bacteria 12879
24 Ga0070698_100150491 3300005471 Bacteria 2275
25 Ga0070699_100000188 3300005518 Bacteria 60070
26 Ga0070697_100001738 3300005536 Bacteria 16640
27 Ga0070697_100024846 3300005536 Bacteria 4772
28 Ga0070697_100279171 3300005536 Bacteria 1433
29 Ga0068853_100234341 3300005539 Bacteria 1680
30 Ga0068853_100360955 3300005539 Unclassified 1353
31 Ga0070695_100000657 3300005545 Bacteria 18437
32 Ga0070695_100001433 3300005545 Bacteria 13225
33 Ga0070696_100003154 3300005546 Bacteria 10976
34 Ga0070704_100001753 3300005549 Bacteria 11864
35 Ga0068857_100032690 3300005577 Bacteria 4599
36 Ga0068859_100011023 3300005617 Bacteria 9096
37 Ga0068861_100055105 3300005719 Bacteria 3031
38 Ga0068861_100377794 3300005719 Bacteria 1251
39 Ga0068863_100176707 3300005841 Unclassified 2049
40 Ga0068863_100593680 3300005841 Bacteria 1096
41 Ga0068860_100001347 3300005843 Bacteria 26688
42 Ga0068862_100008786 3300005844 Bacteria 8367
43 Ga0068862_100168229 3300005844 Unclassified 1961
44 Ga0081455_10001509 3300005937 Bacteria 28740
45 Ga0081540_1000493 3300005983 Bacteria 38816
46 Ga0081539_10000130 3300005985 Bacteria 178299
47 Ga0075365_10167225 3300006038 Unclassified 1534
48 Ga0075365_10169969 3300006038 Bacteria 1521
49 Ga0075365_10329101 3300006038 Bacteria 1076
50 Ga0075368_10006285 3300006042 Bacteria 4143
51 Ga0075363_100000073 3300006048 Bacteria 20975
52 Ga0075363_100084136 3300006048 Unclassified 1744
53 Ga0075364_10003182 3300006051 Bacteria 9298
54 Ga0075367_10003231 3300006178 Bacteria 7707
55 Ga0075367_10063898 3300006178 Bacteria 2201
56 Ga0075366_10083279 3300006195 Bacteria 1912
57 Ga0075366_10088307 3300006195 Unclassified 1856
58 Ga0075370_10052497 3300006353 Bacteria 2313
59 Ga0075428_100017736 3300006844 Bacteria 7866
60 Ga0075428_100099604 3300006844 Bacteria 3169
61 Ga0075428_100484870 3300006844 Bacteria 1323
62 Ga0075430_100016861 3300006846 Bacteria 6222
63 Ga0075430_100073407 3300006846 Unclassified 2869
64 Ga0075430_100260184 3300006846 Bacteria 1437
65 Ga0075431_100000754 3300006847 Bacteria 27999
66 Ga0075431_100010686 3300006847 Bacteria 9223
67 Ga0075431_100273711 3300006847 Bacteria 1710
68 Ga0075433_10001904 3300006852 Bacteria 15702
69 Ga0075433_10166066 3300006852 Bacteria 1964
70 Ga0075434_100008413 3300006871 Bacteria 9594
71 Ga0075434_100186403 3300006871 Bacteria 2095
72 Ga0075429_100008818 3300006880 Bacteria 8769
73 Ga0097620_100011023 3300006931 Bacteria 9096
74 Ga0075435_100009544 3300007076 Bacteria 7035
75 Ga0075435_100020193 3300007076 Bacteria 5100
76 Ga0075435_100108367 3300007076 Unclassified 2308
77 Ga0111539_10018727 3300009094 Bacteria 8571
78 Ga0111539_10027305 3300009094 Bacteria 6971
79 Ga0111539_10034549 3300009094 Bacteria 6130
80 Ga0111539_10073210 3300009094 Bacteria 4039
81 Ga0105245_10325292 3300009098 Bacteria 1516
82 Ga0114129_10031125 3300009147 Bacteria 7546
83 Ga0114129_10094897 3300009147 Bacteria 4131
84 Ga0114129_10158544 3300009147 Bacteria 3094
85 Ga0114129_10204001 3300009147 Bacteria 2676
86 Ga0114129_10536554 3300009147 Bacteria 1523
87 Ga0105249_10004443 3300009553 Bacteria 12140
88 Ga0105249_10052509 3300009553 Unclassified 3722
89 Ga0105239_10153082 3300010375 Bacteria 2574
90 Ga0157380_10038847 3300014326 Unclassified 3698
91 Ga0157380_10182869 3300014326 Bacteria 1843
92 Ga0157380_10465278 3300014326 Bacteria 1218
93 Ga0207653_10000677 3300025885 Bacteria 11707
94 Ga0207707_10066827 3300025912 Bacteria 3131
95 Ga0207660_10010108 3300025917 Bacteria 6113
96 Ga0207659_10070362 3300025926 Bacteria 2552
97 Ga0207670_10215061 3300025936 Bacteria 1468
98 Ga0207689_10079407 3300025942 Bacteria 2697
99 Ga0207712_10000886 3300025961 Bacteria 21743
100 Ga0207668_10085294 3300025972 Unclassified 2304
101 Ga0207668_10494009 3300025972 Bacteria 1052
102 Ga0207678_10001844 3300026067 Bacteria 19420
103 Ga0207678_10016981 3300026067 Bacteria 6389
104 Ga0207708_10001520 3300026075 Bacteria 17286
105 Ga0207674_10007108 3300026116 Bacteria 13082
106 Ga0207675_100019376 3300026118 Bacteria 6347
107 Ga0207675_100078854 3300026118 Bacteria 3086
108 Ga0209813_10004935 3300027866 Bacteria 3216
109 Ga0207428_10005560 3300027907 Bacteria 11736
110 Ga0207428_10104755 3300027907 Bacteria 2182
111 Ga0268266_10197710 3300028379 Bacteria 1839
112 Ga0268266_10606066 3300028379 Bacteria 1052
113 Ga0268265_10001073 3300028380 Bacteria 24373
114 Ga0268264_10001789 3300028381 Bacteria 19645
115 Ga0307511_10000022 3300030521 Bacteria 116875
116 Ga0316576_10004511 3300031727 Bacteria 8367
117 Ga0373958_0001902 3300034819 Bacteria 2866
118 Ga0373958_0017642 3300034819 Bacteria 1285
119 Ga0373928_0008340 3300035084 Bacteria 2010
120 Ga0373929_0008957 3300035085 Bacteria 1849
121 Ga0373940_0006044 3300035088 Unclassified 2661
122 Ga0373939_0003767 3300035114 Bacteria 3575
123 Ga0373961_0013750 3300035241 Bacteria 2045
124 Ga0373962_0034510 3300035242 Bacteria 1401
125 Ga0373931_0001340 3300035691 Bacteria 10526
126 Ga0373931_0009547 3300035691 Bacteria 4640
127 Ga0316584_0012715 3300036712 Bacteria 5940
128 Ga0395900_0154311 3300037418 Bacteria 2346
129 Ga0395898_0110936 3300037466 Unclassified 2629
130 Ga0436365_0262153 3300039437 Bacteria 2047
131 Ga0453684_0035231 3300044712 Bacteria 6923
132 Ga0453684_0152406 3300044712 Bacteria 2745
133 Ga0495629_0060638 3300046459 Bacteria 2644
134 Ga0495637_0053504 3300046520 Bacteria 1680
135 Ga0495643_0116030 3300046522 Bacteria 1357
136 Ga0495587_0155681 3300046536 Bacteria 1302
137 Ga0495668_0109036 3300046616 Unclassified 1514
138 Ga0495657_0213674 3300046675 Unclassified 1172
139 Ga0495658_0259206 3300046683 Bacteria 1095
140 Ga0496101_0022859 3300048904 Bacteria 4311
141 Ga0496102_0014917 3300048905 Bacteria 6760
142 Ga0496102_0240483 3300048905 Bacteria 1707
143 Ga0496103_0003302 3300048906 Bacteria 9874
144 Ga0496104_0005274 3300048907 Bacteria 11296
145 Ga0496105_0182892 3300048908 Unclassified 1716
146 Ga0496106_0003196 3300048909 Bacteria 12258
147 Ga0496106_0160242 3300048909 Bacteria 1779
148 Ga0496107_0017213 3300048910 Bacteria 5084
149 Ga0496107_0472217 3300048910 Unclassified 931
150 Ga0496108_0003172 3300048911 Bacteria 13232
151 Ga0496108_0053895 3300048911 Bacteria 3374
152 Ga0496109_0003718 3300048912 Bacteria 12748
153 Ga0496109_0256665 3300048912 Bacteria 1646
154 Ga0496109_0272044 3300048912 Unclassified 1596
155 Ga0496110_0001272 3300048913 Bacteria 18044
156 Ga0496110_0155225 3300048913 Bacteria 2073
157 Ga0496111_0020679 3300048914 Bacteria 4586
158 Ga0496111_0069219 3300048914 Bacteria 2566
159 Ga0496112_0215071 3300048915 Bacteria 1879
160 Ga0496113_0003078 3300048916 Bacteria 9903
161 Ga0496113_0283395 3300048916 Bacteria 1325
162 Ga0496115_0224472 3300048918 Bacteria 1550
163 Ga0501032_0002559 3300049569 Bacteria 14233
164 Ga0501034_0000008 3300049571 Bacteria 354712
165 Ga0501034_0398613 3300049571 Bacteria 1299
166 Ga0501034_0512301 3300049571 Bacteria 1112
167 Ga0501036_0012045 3300049572 Bacteria 7167
168 Ga0501037_0001939 3300049573 Bacteria 14974
169 Ga0501038_0015329 3300049574 Bacteria 6968
170 Ga0501039_0000061 3300049575 Bacteria 85455
171 Ga0501039_0347593 3300049575 Unclassified 1165
172 Ga0501041_0025373 3300049577 Bacteria 3562
173 Ga0501041_0047222 3300049577 Unclassified 2621
174 Ga0501042_0027140 3300049578 Plasmid 4025
175 Ga0501046_0019507 3300049580 Bacteria 5624
176 Ga0501046_0024879 3300049580 Bacteria 4905
177 Ga0501047_0000095 3300049581 Bacteria 108671
178 Ga0501048_0000625 3300049582 Bacteria 25248
179 Ga0501067_0008407 3300049583 Bacteria 5730
180 Ga0501067_0065052 3300049583 Bacteria 2019
181 Ga0501070_0101020 3300049586 Bacteria 2386
182 Ga0501073_0055159 3300049589 Bacteria 2781
183 Ga0501074_0022759 3300049590 Bacteria 4556
184 Ga0501075_0040213 3300049591 Bacteria 3501
185 Ga0501076_0010461 3300049592 Bacteria 6886
186 Ga0501076_0195118 3300049592 Bacteria 1653
187 Ga0501076_0243178 3300049592 Bacteria 1472
188 Ga0501077_0006648 3300049593 Bacteria 7102
189 Ga0501077_0013680 3300049593 Bacteria 5086
190 Ga0501079_0010440 3300049741 Bacteria 7060
191 Ga0501079_0012035 3300049741 Bacteria 6602
192 Ga0501080_0000012 3300049742 Bacteria 108733
193 Ga0501080_0004155 3300049742 Bacteria 12838
194 Ga0501081_0022409 3300049743 Bacteria 4226
195 Ga0501081_0256796 3300049743 Bacteria 1276
196 Ga0501035_0000013 3300049822 Bacteria 255756
197 Ga0501044_0000004 3300049823 Bacteria 327475
198 Ga0501045_0016698 3300049824 Bacteria 5214
199 Ga0501045_0055566 3300049824 Bacteria 2895
200 nmdc:mga03n38_205829_c1 3300050490 Unclassified 1020
201 nmdc:mga03n38_7500_c1 3300050490 Bacteria 3863
202 nmdc:mga03n38_9696_c1 3300050490 Bacteria 3512
203 nmdc:mga00v17_10443_c1 3300050491 Bacteria 5071
204 nmdc:mga00v17_166375_c1 3300050491 Unclassified 1421
205 nmdc:mga00v17_6096_c1 3300050491 Bacteria 6381
206 nmdc:mga0yw44_226341_c1 3300050492 Bacteria 1241
207 nmdc:mga0yw44_27135_c1 3300050492 Bacteria 3277
208 nmdc:mga0yw44_286387_c1 3300050492 Bacteria 1102
209 nmdc:mga0k408_167159_c1 3300050493 Bacteria 1311
210 nmdc:mga0k408_71594_c2 3300050493 Bacteria 1618
211 nmdc:mga06z11_15027_c1 3300050494 Bacteria 3447
212 nmdc:mga06z11_540_c1 3300050494 Bacteria 13907
213 nmdc:mga04h51_5570_c1 3300050495 Bacteria 3216
214 nmdc:mga07m45_36366_c1 3300050496 Bacteria 2742
215 nmdc:mga05p37_336184_c1 3300050507 Unclassified 1782
216 nmdc:mga05p37_426505_c1 3300050507 Bacteria 1542
217 nmdc:mga05p37_87982_c1 3300050507 Bacteria 3829
218 nmdc:mga05p37_95616_c1 3300050507 Bacteria 3660
219 nmdc:mga09592_10615_c1 3300050508 Bacteria 7500
220 nmdc:mga09592_81769_c1 3300050508 Unclassified 2753
221 nmdc:mga0qj67_27158_c1 3300050509 Bacteria 4433
222 nmdc:mga06r32_14151_c1 3300050510 Bacteria 7235
223 nmdc:mga06r32_185851_c1 3300050510 Bacteria 2065
224 nmdc:mga06r32_54790_c1 3300050510 Bacteria 3824
225 nmdc:mga08y16_40731_c1 3300050511 Bacteria 4868
226 nmdc:mga08y16_69705_c1 3300050511 Bacteria 3666
227 nmdc:mga0n895_11832_c1 3300050512 Bacteria 7803
228 nmdc:mga0n895_4962_c1 3300050512 Bacteria 11038
229 nmdc:mga0rr50_34092_c1 3300050513 Bacteria 3643
230 nmdc:mga0a205_2038_c1 3300050515 Bacteria 17644
231 Ga0495619_0076726 3300053085 Bacteria 2244
232 Ga0500646_0016036 3300053090 Bacteria 1954
233 Ga0500556_0000159 3300053104 Bacteria 55421
234 Ga0500604_0003407 3300053151 Bacteria 4280
235 Ga0500616_0006481 3300053153 Bacteria 7659
236 Ga0500616_0014101 3300053153 Bacteria 4606
237 Ga0500616_0029215 3300053153 Unclassified 3035
238 Ga0500637_0238009 3300053178 Bacteria 1022
239 Ga0501084_0048265 3300054114 Bacteria 3564
240 Ga0501082_0020421 3300060353 Bacteria 5712
241 Ga0501082_0035382 3300060353 Bacteria 4304
242 Ga0501082_0070089 3300060353 Bacteria 3019
243 Ga0501082_0190327 3300060353 Bacteria 1785
244 Ga0530510_0008499 3300061734 Bacteria 7160
245 Ga0530510_0022241 3300061734 Unclassified 4516
246 Ga0530510_0038126 3300061734 Bacteria 3469

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048908 Ga0496105_0182892 Ga0496105_0182892_94_870 228
2 3300048910 Ga0496107_0472217 Ga0496107_0472217_60_836 228
3 3300048912 Ga0496109_0272044 Ga0496109_0272044_98_874 228
4 3300050493 nmdc:mga0k408_167159_c1 nmdc:mga0k408_167159_c1_122_994 235
5 3300005536 Ga0070697_100001738 Ga0070697_1000017385 254
6 3300006846 Ga0075430_100016861 Ga0075430_1000168614 254
7 3300006847 Ga0075431_100010686 Ga0075431_1000106867 254
8 3300006880 Ga0075429_100008818 Ga0075429_1000088183 254
9 3300049577 Ga0501041_0025373 Ga0501041_0025373_93_1043 254
10 3300049580 Ga0501046_0024879 Ga0501046_0024879_826_1800 254
11 3300054114 Ga0501084_0048265 Ga0501084_0048265_1739_2713 254
12 3300060353 Ga0501082_0190327 Ga0501082_0190327_145_1119 254
13 3300006195 Ga0075366_10083279 Ga0075366_100832792 255
14 3300050508 nmdc:mga09592_10615_c1 nmdc:mga09592_10615_c1_784_1719 255
15 3300050509 nmdc:mga0qj67_27158_c1 nmdc:mga0qj67_27158_c1_2175_3110 255
16 3300050510 nmdc:mga06r32_14151_c1 nmdc:mga06r32_14151_c1_5234_6169 255
17 3300005341 Ga0070691_10037020 Ga0070691_100370203 258
18 iso_pu_bacteria 2989392574 2989396504 258
19 3300031727 Ga0316576_10004511 Ga0316576_100045115 263
20 3300036712 Ga0316584_0012715 Ga0316584_0012715_2714_3613 263
21 3300046536 Ga0495587_0155681 Ga0495587_0155681_298_1200 263
22 3300046675 Ga0495657_0213674 Ga0495657_0213674_12_914 263
23 3300048905 Ga0496102_0240483 Ga0496102_0240483_267_1169 263
24 3300048915 Ga0496112_0215071 Ga0496112_0215071_306_1208 263
25 3300061734 Ga0530510_0022241 Ga0530510_0022241_581_1495 263
26 3300005366 Ga0070659_100167522 Ga0070659_1001675222 264
27 3300005455 Ga0070663_100008353 Ga0070663_1000083533 264
28 3300014326 Ga0157380_10182869 Ga0157380_101828692 264
29 3300026067 Ga0207678_10016981 Ga0207678_100169814 264
30 3300053104 Ga0500556_0000159 Ga0500556_0000159_35789_36700 265
31 3300053153 Ga0500616_0006481 Ga0500616_0006481_4116_5027 265
32 3300005937 Ga0081455_10001509 Ga0081455_1000150925 266
33 3300006038 Ga0075365_10167225 Ga0075365_101672251 266
34 3300006038 Ga0075365_10169969 Ga0075365_101699692 266
35 3300006178 Ga0075367_10063898 Ga0075367_100638982 266
36 3300006195 Ga0075366_10088307 Ga0075366_100883072 266
37 3300006353 Ga0075370_10052497 Ga0075370_100524973 266
38 3300049571 Ga0501034_0512301 Ga0501034_0512301_151_1062 266
39 3300049592 Ga0501076_0195118 Ga0501076_0195118_67_987 266
40 3300050491 nmdc:mga00v17_10443_c1 nmdc:mga00v17_10443_c1_699_1616 266
41 3300050491 nmdc:mga00v17_166375_c1 nmdc:mga00v17_166375_c1_76_993 266
42 3300050492 nmdc:mga0yw44_226341_c1 nmdc:mga0yw44_226341_c1_86_1003 266
43 3300050493 nmdc:mga0k408_71594_c2 nmdc:mga0k408_71594_c2_80_997 266
44 3300050496 nmdc:mga07m45_36366_c1 nmdc:mga07m45_36366_c1_609_1526 266
45 3300005545 Ga0070695_100001433 Ga0070695_10000143312 267
46 3300005719 Ga0068861_100055105 Ga0068861_1000551053 267
47 3300005719 Ga0068861_100377794 Ga0068861_1003777941 267
48 3300006038 Ga0075365_10329101 Ga0075365_103291011 267
49 3300006042 Ga0075368_10006285 Ga0075368_100062854 267
50 3300006048 Ga0075363_100000073 Ga0075363_1000000733 267
51 3300006051 Ga0075364_10003182 Ga0075364_100031823 267
52 3300006178 Ga0075367_10003231 Ga0075367_100032318 267
53 3300006844 Ga0075428_100017736 Ga0075428_1000177364 267
54 3300006852 Ga0075433_10001904 Ga0075433_100019049 267
55 3300006871 Ga0075434_100008413 Ga0075434_1000084134 267
56 3300007076 Ga0075435_100020193 Ga0075435_1000201938 267
57 3300009094 Ga0111539_10018727 Ga0111539_100187277 267
58 3300009147 Ga0114129_10094897 Ga0114129_100948974 267
59 3300014326 Ga0157380_10465278 Ga0157380_104652782 267
60 3300025972 Ga0207668_10085294 Ga0207668_100852942 267
61 3300026118 Ga0207675_100078854 Ga0207675_1000788542 267
62 3300027866 Ga0209813_10004935 Ga0209813_100049354 267
63 3300027907 Ga0207428_10005560 Ga0207428_1000556012 267
64 3300028379 Ga0268266_10197710 Ga0268266_101977101 267
65 3300028379 Ga0268266_10606066 Ga0268266_106060661 267
66 3300034819 Ga0373958_0017642 Ga0373958_0017642_57_968 267
67 3300035084 Ga0373928_0008340 Ga0373928_0008340_137_1048 267
68 3300035085 Ga0373929_0008957 Ga0373929_0008957_395_1306 267
69 3300035088 Ga0373940_0006044 Ga0373940_0006044_1381_2292 267
70 3300035114 Ga0373939_0003767 Ga0373939_0003767_2468_3379 267
71 3300035241 Ga0373961_0013750 Ga0373961_0013750_872_1783 267
72 3300035242 Ga0373962_0034510 Ga0373962_0034510_373_1284 267
73 3300035691 Ga0373931_0001340 Ga0373931_0001340_3987_4898 267
74 3300035691 Ga0373931_0009547 Ga0373931_0009547_1624_2535 267
75 3300039437 Ga0436365_0262153 Ga0436365_0262153_228_1139 267
76 3300046520 Ga0495637_0053504 Ga0495637_0053504_45_956 267
77 3300046522 Ga0495643_0116030 Ga0495643_0116030_105_1019 267
78 3300046616 Ga0495668_0109036 Ga0495668_0109036_342_1253 267
79 3300048907 Ga0496104_0005274 Ga0496104_0005274_681_1592 267
80 3300048911 Ga0496108_0003172 Ga0496108_0003172_2942_3853 267
81 3300048912 Ga0496109_0003718 Ga0496109_0003718_4323_5234 267
82 3300048913 Ga0496110_0001272 Ga0496110_0001272_9580_10491 267
83 3300048914 Ga0496111_0020679 Ga0496111_0020679_2540_3451 267
84 3300048916 Ga0496113_0003078 Ga0496113_0003078_6834_7745 267
85 3300050490 nmdc:mga03n38_7500_c1 nmdc:mga03n38_7500_c1_1929_2840 267
86 3300050490 nmdc:mga03n38_9696_c1 nmdc:mga03n38_9696_c1_1448_2359 267
87 3300050491 nmdc:mga00v17_6096_c1 nmdc:mga00v17_6096_c1_4060_4971 267
88 3300050492 nmdc:mga0yw44_27135_c1 nmdc:mga0yw44_27135_c1_1465_2376 267
89 3300050492 nmdc:mga0yw44_286387_c1 nmdc:mga0yw44_286387_c1_56_973 267
90 3300050494 nmdc:mga06z11_15027_c1 nmdc:mga06z11_15027_c1_1511_2422 267
91 3300050494 nmdc:mga06z11_540_c1 nmdc:mga06z11_540_c1_10813_11724 267
92 3300050495 nmdc:mga04h51_5570_c1 nmdc:mga04h51_5570_c1_872_1783 267
93 3300050507 nmdc:mga05p37_95616_c1 nmdc:mga05p37_95616_c1_1983_2894 267
94 3300050510 nmdc:mga06r32_185851_c1 nmdc:mga06r32_185851_c1_284_1195 267
95 3300050511 nmdc:mga08y16_69705_c1 nmdc:mga08y16_69705_c1_390_1301 267
96 3300050512 nmdc:mga0n895_4962_c1 nmdc:mga0n895_4962_c1_8061_8972 267
97 3300050513 nmdc:mga0rr50_34092_c1 nmdc:mga0rr50_34092_c1_625_1536 267
98 3300050515 nmdc:mga0a205_2038_c1 nmdc:mga0a205_2038_c1_9556_10467 267
99 3300053178 Ga0500637_0238009 Ga0500637_0238009_23_949 267
100 3300003322 rootL2_10172378 rootL2_101723783 268
101 3300005340 Ga0070689_100280243 Ga0070689_1002802431 268
102 3300005341 Ga0070691_10005519 Ga0070691_100055193 268
103 3300005354 Ga0070675_100014903 Ga0070675_1000149037 268
104 3300005406 Ga0070703_10002070 Ga0070703_100020707 268
105 3300005440 Ga0070705_100000908 Ga0070705_10000090812 268
106 3300005441 Ga0070700_100001322 Ga0070700_1000013228 268
107 3300005444 Ga0070694_100000725 Ga0070694_10000072516 268
108 3300005445 Ga0070708_100021118 Ga0070708_1000211185 268
109 3300005455 Ga0070663_100016334 Ga0070663_1000163341 268
110 3300005518 Ga0070699_100000188 Ga0070699_10000018841 268
111 3300005536 Ga0070697_100024846 Ga0070697_1000248466 268
112 3300005539 Ga0068853_100360955 Ga0068853_1003609551 268
113 3300005545 Ga0070695_100000657 Ga0070695_1000006575 268
114 3300005546 Ga0070696_100003154 Ga0070696_1000031545 268
115 3300005549 Ga0070704_100001753 Ga0070704_1000017534 268
116 3300005577 Ga0068857_100032690 Ga0068857_1000326903 268
117 3300005617 Ga0068859_100011023 Ga0068859_1000110233 268
118 3300005841 Ga0068863_100176707 Ga0068863_1001767072 268
119 3300005841 Ga0068863_100593680 Ga0068863_1005936801 268
120 3300005843 Ga0068860_100001347 Ga0068860_1000013479 268
121 3300005844 Ga0068862_100008786 Ga0068862_1000087863 268
122 3300006844 Ga0075428_100484870 Ga0075428_1004848701 268
123 3300006846 Ga0075430_100260184 Ga0075430_1002601842 268
124 3300006847 Ga0075431_100000754 Ga0075431_1000007546 268
125 3300006871 Ga0075434_100186403 Ga0075434_1001864032 268
126 3300006931 Ga0097620_100011023 Ga0097620_1000110233 268
127 3300007076 Ga0075435_100009544 Ga0075435_1000095446 268
128 3300007076 Ga0075435_100108367 Ga0075435_1001083672 268
129 3300009094 Ga0111539_10034549 Ga0111539_100345492 268
130 3300009098 Ga0105245_10325292 Ga0105245_103252921 268
131 3300009147 Ga0114129_10031125 Ga0114129_100311254 268
132 3300009147 Ga0114129_10204001 Ga0114129_102040014 268
133 3300009553 Ga0105249_10004443 Ga0105249_100044433 268
134 3300010375 Ga0105239_10153082 Ga0105239_101530823 268
135 3300025885 Ga0207653_10000677 Ga0207653_100006775 268
136 3300025912 Ga0207707_10066827 Ga0207707_100668273 268
137 3300025917 Ga0207660_10010108 Ga0207660_100101082 268
138 3300025926 Ga0207659_10070362 Ga0207659_100703624 268
139 3300025936 Ga0207670_10215061 Ga0207670_102150611 268
140 3300025942 Ga0207689_10079407 Ga0207689_100794072 268
141 3300025961 Ga0207712_10000886 Ga0207712_1000088616 268
142 3300025972 Ga0207668_10494009 Ga0207668_104940092 268
143 3300026067 Ga0207678_10001844 Ga0207678_1000184411 268
144 3300026075 Ga0207708_10001520 Ga0207708_100015203 268
145 3300026116 Ga0207674_10007108 Ga0207674_100071085 268
146 3300026118 Ga0207675_100019376 Ga0207675_1000193765 268
147 3300027907 Ga0207428_10104755 Ga0207428_101047552 268
148 3300028380 Ga0268265_10001073 Ga0268265_1000107316 268
149 3300028381 Ga0268264_10001789 Ga0268264_100017895 268
150 3300034819 Ga0373958_0001902 Ga0373958_0001902_445_1359 268
151 3300037466 Ga0395898_0110936 Ga0395898_0110936_1467_2393 268
152 3300046459 Ga0495629_0060638 Ga0495629_0060638_347_1261 268
153 3300046683 Ga0495658_0259206 Ga0495658_0259206_93_1007 268
154 3300048904 Ga0496101_0022859 Ga0496101_0022859_2257_3174 268
155 3300048905 Ga0496102_0014917 Ga0496102_0014917_4006_4920 268
156 3300048906 Ga0496103_0003302 Ga0496103_0003302_681_1595 268
157 3300048909 Ga0496106_0003196 Ga0496106_0003196_3999_4913 268
158 3300048909 Ga0496106_0160242 Ga0496106_0160242_59_976 268
159 3300048910 Ga0496107_0017213 Ga0496107_0017213_3139_4053 268
160 3300048911 Ga0496108_0053895 Ga0496108_0053895_2110_3027 268
161 3300048912 Ga0496109_0256665 Ga0496109_0256665_652_1569 268
162 3300048913 Ga0496110_0155225 Ga0496110_0155225_960_1874 268
163 3300048914 Ga0496111_0069219 Ga0496111_0069219_1618_2532 268
164 3300048916 Ga0496113_0283395 Ga0496113_0283395_41_958 268
165 3300048918 Ga0496115_0224472 Ga0496115_0224472_26_943 268
166 3300049569 Ga0501032_0002559 Ga0501032_0002559_10947_11864 268
167 3300049571 Ga0501034_0000008 Ga0501034_0000008_273554_274471 268
168 3300049572 Ga0501036_0012045 Ga0501036_0012045_253_1170 268
169 3300049573 Ga0501037_0001939 Ga0501037_0001939_4337_5254 268
170 3300049574 Ga0501038_0015329 Ga0501038_0015329_5842_6759 268
171 3300049575 Ga0501039_0000061 Ga0501039_0000061_268_1185 268
172 3300049578 Ga0501042_0027140 Ga0501042_0027140_24_938 268
173 3300049580 Ga0501046_0019507 Ga0501046_0019507_2834_3751 268
174 3300049581 Ga0501047_0000095 Ga0501047_0000095_58231_59148 268
175 3300049583 Ga0501067_0008407 Ga0501067_0008407_635_1552 268
176 3300049589 Ga0501073_0055159 Ga0501073_0055159_821_1738 268
177 3300049592 Ga0501076_0243178 Ga0501076_0243178_177_1091 268
178 3300049593 Ga0501077_0013680 Ga0501077_0013680_3711_4625 268
179 3300049741 Ga0501079_0010440 Ga0501079_0010440_532_1446 268
180 3300049742 Ga0501080_0000012 Ga0501080_0000012_38266_39183 268
181 3300049743 Ga0501081_0256796 Ga0501081_0256796_246_1160 268
182 3300049822 Ga0501035_0000013 Ga0501035_0000013_34425_35342 268
183 3300049823 Ga0501044_0000004 Ga0501044_0000004_75164_76081 268
184 3300049824 Ga0501045_0016698 Ga0501045_0016698_3627_4541 268
185 3300050507 nmdc:mga05p37_426505_c1 nmdc:mga05p37_426505_c1_208_1122 268
186 3300050507 nmdc:mga05p37_87982_c1 nmdc:mga05p37_87982_c1_2157_3071 268
187 3300050512 nmdc:mga0n895_11832_c1 nmdc:mga0n895_11832_c1_6158_7072 268
188 3300053085 Ga0495619_0076726 Ga0495619_0076726_261_1175 268
189 3300053153 Ga0500616_0014101 Ga0500616_0014101_2687_3631 268
190 3300053153 Ga0500616_0029215 Ga0500616_0029215_1865_2809 268
191 3300060353 Ga0501082_0035382 Ga0501082_0035382_2855_3769 268
192 3300060353 Ga0501082_0070089 Ga0501082_0070089_2015_2932 268
193 3300005983 Ga0081540_1000493 Ga0081540_10004938 269
194 3300006846 Ga0075430_100073407 Ga0075430_1000734073 269
195 3300006847 Ga0075431_100273711 Ga0075431_1002737112 269
196 3300006852 Ga0075433_10166066 Ga0075433_101660663 269
197 3300009094 Ga0111539_10027305 Ga0111539_100273057 269
198 3300009094 Ga0111539_10073210 Ga0111539_100732102 269
199 3300009147 Ga0114129_10158544 Ga0114129_101585443 269
200 3300009147 Ga0114129_10536554 Ga0114129_105365542 269
201 3300049571 Ga0501034_0398613 Ga0501034_0398613_205_1143 269
202 3300049575 Ga0501039_0347593 Ga0501039_0347593_162_1079 269
203 3300049577 Ga0501041_0047222 Ga0501041_0047222_882_1799 269
204 3300049586 Ga0501070_0101020 Ga0501070_0101020_1242_2159 269
205 3300049590 Ga0501074_0022759 Ga0501074_0022759_1565_2482 269
206 3300049591 Ga0501075_0040213 Ga0501075_0040213_1850_2767 269
207 3300049592 Ga0501076_0010461 Ga0501076_0010461_5135_6052 269
208 3300049593 Ga0501077_0006648 Ga0501077_0006648_4662_5579 269
209 3300049741 Ga0501079_0012035 Ga0501079_0012035_518_1435 269
210 3300049742 Ga0501080_0004155 Ga0501080_0004155_9400_10317 269
211 3300049743 Ga0501081_0022409 Ga0501081_0022409_2520_3437 269
212 3300049824 Ga0501045_0055566 Ga0501045_0055566_234_1151 269
213 3300050507 nmdc:mga05p37_336184_c1 nmdc:mga05p37_336184_c1_282_1199 269
214 3300050508 nmdc:mga09592_81769_c1 nmdc:mga09592_81769_c1_1697_2614 269
215 3300050510 nmdc:mga06r32_54790_c1 nmdc:mga06r32_54790_c1_999_1916 269
216 3300050511 nmdc:mga08y16_40731_c1 nmdc:mga08y16_40731_c1_3732_4649 269
217 3300060353 Ga0501082_0020421 Ga0501082_0020421_4365_5282 269
218 3300061734 Ga0530510_0008499 Ga0530510_0008499_31_948 269
219 3300061734 Ga0530510_0038126 Ga0530510_0038126_2395_3312 269
220 3300006048 Ga0075363_100084136 Ga0075363_1000841362 270
221 3300030521 Ga0307511_10000022 Ga0307511_1000002234 270
222 3300049582 Ga0501048_0000625 Ga0501048_0000625_13559_14485 270
223 3300050490 nmdc:mga03n38_205829_c1 nmdc:mga03n38_205829_c1_67_999 270
224 3300053090 Ga0500646_0016036 Ga0500646_0016036_951_1883 270
225 3300053151 Ga0500604_0003407 Ga0500604_0003407_781_1713 270
226 3300005367 Ga0070667_100476337 Ga0070667_1004763371 271
227 3300005438 Ga0070701_10007494 Ga0070701_100074945 272
228 3300005471 Ga0070698_100150491 Ga0070698_1001504911 272
229 3300005539 Ga0068853_100234341 Ga0068853_1002343412 272
230 3300006844 Ga0075428_100099604 Ga0075428_1000996044 273
231 3300044712 Ga0453684_0035231 Ga0453684_0035231_491_1465 279
232 3300044712 Ga0453684_0152406 Ga0453684_0152406_342_1316 279
233 3300005289 Ga0065704_10042847 Ga0065704_100428471 281
234 3300005330 Ga0070690_100003345 Ga0070690_1000033455 281
235 3300005336 Ga0070680_100419361 Ga0070680_1004193611 281
236 3300005353 Ga0070669_100314225 Ga0070669_1003142251 281
237 3300005438 Ga0070701_10008299 Ga0070701_100082991 281
238 3300005445 Ga0070708_100182016 Ga0070708_1001820162 281
239 3300005536 Ga0070697_100279171 Ga0070697_1002791712 281
240 3300005844 Ga0068862_100168229 Ga0068862_1001682291 281
241 3300009553 Ga0105249_10052509 Ga0105249_100525093 281
242 3300014326 Ga0157380_10038847 Ga0157380_100388472 281
243 3300049583 Ga0501067_0065052 Ga0501067_0065052_52_1005 281
244 3300005471 Ga0070698_100006306 Ga0070698_1000063063 283
245 3300037418 Ga0395900_0154311 Ga0395900_0154311_842_1783 283
246 3300003203 JGI25406J46586_10040179 JGI25406J46586_100401792 286
247 3300005985 Ga0081539_10000130 Ga0081539_10000130134 286

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00294

PfkB

pfkB family carbohydrate kinase

55

342

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7agh-assembly1.cif.gz_B crystal structure of sf kinase yihv from e. coli in complex with amppnp-mg 0.8838 15 279
7agh-assembly2.cif.gz_A crystal structure of sf kinase yihv from e. coli in complex with amppnp-mg 0.8784 14 279
2rbc-assembly1.cif.gz_A-2 crystal structure of a putative ribokinase from agrobacterium tumefaciens 0.8784 15 280
4xda-assembly1.cif.gz_A vibrio cholerae o395 ribokinase complexed with ribose, adp and sodium ion. 0.8737 13 282
8cqx-assembly1.cif.gz_A ribokinase from t.sp mutant a92g 0.8725 15 278
ID Description Score Start End Superfamily
af_F4K7C7_15_348_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8968 16 265 3.40.1190.20
af_P32143_2_297_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.888 15 279 3.40.1190.20
af_Q19133_1_311_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8602 10 276 3.40.1190.20
af_Q9VW84_5_299_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8503 14 265 3.40.1190.20
af_Q9SX54_1_210_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8467 106 281 3.40.1190.20
ID Description Score Start End GO Terms
AF-A0A7V9SXX7-F1-model_v4 Carbohydrate kinase family protein 0.9709 1 279 GO:0016301
AF-A0A7V9GA71-F1-model_v4 Carbohydrate kinase family protein 0.9679 182 281 GO:0006796
GO:0016301
AF-A0A2V8T551-F1-model_v4 Ribokinase 0.9668 2 280 GO:0016301
AF-A0A2V8RBH9-F1-model_v4 Ribokinase 0.9622 1 282 GO:0016301
AF-A0A257VNH7-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.9576 109 279

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pLDDT pTM Quality
91.58 0.91 High
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Predicted Structure (AlphaFold2)

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