F358644

General Info

Members Datasets Scaffolds Average Seq Length
247 186 494 253

Family's Representative Sequence

Representative Sequence 3300001979|JGI24740J21852_10002780|JGI24740J21852_100027804
Length 300
Sequence MATGKVMPFAEFYAQIKYWFMINGQKVVVVLPAYNAAKTLYRTYKEIDRSLVDEVILVDDASKDNTIAVAKDIGITHIVCHNNNKGYGGNQKSCYKRALELGADIIVMLHPDYQYTPSLIAPMVSLIANGVYPVVLGSRILGRGAIKGGMPKYKYFFNRLLTVSQNILMWQKLSEYHTGYRAYHREVLLSIPFQQNSDDFVFDNELLAQVFYKGYEIAEITCPTYYFEEASSINFTRSAIYGLGVLRVSVQYLLQKLGAGQYRIFKGLTRERGDWRKEHMSVKNGMPAAGHAGNKAPSAL

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
22 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
67 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
69 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
74 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
108 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
109 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
110 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
111 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
112 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
113 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
114 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
115 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
116 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
125 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
126 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
127 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
128 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
129 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
130 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
131 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
132 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
135 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
136 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
137 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
138 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
139 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
142 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
143 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
144 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
145 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
146 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
158 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
159 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
160 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
161 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
162 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
163 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
164 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
165 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
166 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
167 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
168 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
169 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
170 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
171 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
172 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
173 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
176 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
177 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
178 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
179 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
180 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
181 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
182 2738541278 Niastella sp. CF465 Isolate Unclassified
183 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
184 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
185 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
186 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.17
Metatranscriptomes 0.4
Isolates 2.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.03
Nodule 0
Rhizoplane 1.62
Rhizosphere 74.49
Stem 0
Stem Tuber 0
Unclassified 13.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10002780 3300001979 Bacteria 7832
2 JGI25153J46596_10027470 3300003215 Bacteria 1993
3 rootL2_10348146 3300003322 Unclassified 2956
4 rootH1_10017103 3300003323 Bacteria 28716
5 Ga0055542_1014369 3300003762 Bacteria 1303
6 Ga0055526_1000389 3300003771 Bacteria 35466
7 Ga0055526_1002936 3300003771 Bacteria 11174
8 Ga0055526_1018044 3300003771 Unclassified 2657
9 Ga0055528_1000086 3300003790 Bacteria 73314
10 Ga0070658_10083565 3300005327 Bacteria 2625
11 Ga0070658_10133346 3300005327 Bacteria 2071
12 Ga0070683_100268217 3300005329 Bacteria 1624
13 Ga0070683_100361914 3300005329 Bacteria 1381
14 Ga0068869_100006834 3300005334 Bacteria 7256
15 Ga0070680_100120909 3300005336 Bacteria 2186
16 Ga0070680_100135073 3300005336 Bacteria 2066
17 Ga0068868_100011757 3300005338 Bacteria 6379
18 Ga0070660_100514363 3300005339 Bacteria 996
19 Ga0070689_100114132 3300005340 Bacteria 2152
20 Ga0070661_100067743 3300005344 Unclassified 2623
21 Ga0070669_100100406 3300005353 Unclassified 2182
22 Ga0070669_100227689 3300005353 Bacteria 1476
23 Ga0070675_100034239 3300005354 Unclassified 4121
24 Ga0070674_100027638 3300005356 Bacteria 3719
25 Ga0070674_100033095 3300005356 Unclassified 3439
26 Ga0070673_100034429 3300005364 Unclassified 3834
27 Ga0070673_100205895 3300005364 Bacteria 1696
28 Ga0070688_100063196 3300005365 Bacteria 2345
29 Ga0070703_10000217 3300005406 Bacteria 27674
30 Ga0070709_10000070 3300005434 Bacteria 79477
31 Ga0070681_10241426 3300005458 Bacteria 1720
32 Ga0070681_10451983 3300005458 Bacteria 1197
33 Ga0068867_100050777 3300005459 Unclassified 3058
34 Ga0068867_100083177 3300005459 Bacteria 2416
35 Ga0070685_10298004 3300005466 Bacteria 1086
36 Ga0070707_100009319 3300005468 Bacteria 9112
37 Ga0070698_100091010 3300005471 Bacteria 3033
38 Ga0070699_100158418 3300005518 Bacteria 2003
39 Ga0070679_100000386 3300005530 Bacteria 37602
40 Ga0070684_100033359 3300005535 Bacteria 4394
41 Ga0068853_100061808 3300005539 Unclassified 3240
42 Ga0068853_100126806 3300005539 Bacteria 2281
43 Ga0068855_100134681 3300005563 Bacteria 2819
44 Ga0068855_100253216 3300005563 Bacteria 1963
45 Ga0070664_100020414 3300005564 Bacteria 5455
46 Ga0068857_100035072 3300005577 Bacteria 4441
47 Ga0068857_100145579 3300005577 Bacteria 2144
48 Ga0068854_100038414 3300005578 Unclassified 3367
49 Ga0068854_100277859 3300005578 Bacteria 1347
50 Ga0068856_100016428 3300005614 Bacteria 7161
51 Ga0068859_100279652 3300005617 Bacteria 1761
52 Ga0068859_100834027 3300005617 Unclassified 1008
53 Ga0068864_100002481 3300005618 Bacteria 15238
54 Ga0068866_10272563 3300005718 Unclassified 1045
55 Ga0068861_100038939 3300005719 Bacteria 3546
56 Ga0068860_100079957 3300005843 Unclassified 3109
57 Ga0068860_100507038 3300005843 Bacteria 1205
58 Ga0081540_1002102 3300005983 Bacteria 16586
59 Ga0070717_10094421 3300006028 Bacteria 2530
60 Ga0075366_10113429 3300006195 Bacteria 1632
61 Ga0068871_100830827 3300006358 Bacteria 853
62 Ga0068865_100351514 3300006881 Bacteria 1194
63 Ga0097620_100279667 3300006931 Bacteria 1761
64 Ga0097620_100833999 3300006931 Unclassified 1008
65 Ga0114129_10001316 3300009147 Bacteria 33211
66 Ga0105241_10096200 3300009174 Bacteria 2345
67 Ga0105241_10361006 3300009174 Bacteria 1264
68 Ga0105242_10121869 3300009176 Bacteria 2239
69 Ga0105242_10713557 3300009176 Unclassified 983
70 Ga0105237_10006672 3300009545 Bacteria 12758
71 Ga0105249_10372439 3300009553 Bacteria 1452
72 Ga0157373_10000489 3300013100 Bacteria 31312
73 Ga0157371_10000318 3300013102 Bacteria 62463
74 Ga0157371_10002305 3300013102 Bacteria 18368
75 Ga0157371_10006424 3300013102 Bacteria 9708
76 Ga0157371_10202425 3300013102 Bacteria 1423
77 Ga0157370_10024532 3300013104 Bacteria 5972
78 Ga0157370_10388438 3300013104 Bacteria 1285
79 Ga0157369_10034794 3300013105 Bacteria 5526
80 Ga0157369_10218308 3300013105 Bacteria 1996
81 Ga0157369_10223402 3300013105 Bacteria 1970
82 Ga0157369_10438233 3300013105 Bacteria 1354
83 Ga0157374_10004425 3300013296 Bacteria 11813
84 Ga0157374_10032973 3300013296 Bacteria 4721
85 Ga0157378_10164097 3300013297 Unclassified 2080
86 Ga0163162_10009235 3300013306 Bacteria 9593
87 Ga0157372_10010260 3300013307 Bacteria 9950
88 Ga0157372_10430970 3300013307 Bacteria 1537
89 Ga0157375_10062052 3300013308 Unclassified 3713
90 Ga0163163_10001079 3300014325 Bacteria 23132
91 Ga0157380_10688938 3300014326 Bacteria 1025
92 Ga0157380_10978171 3300014326 Bacteria 878
93 Ga0157377_10003694 3300014745 Bacteria 6942
94 Ga0157377_10043994 3300014745 Bacteria 2488
95 Ga0157379_10145420 3300014968 Bacteria 2138
96 Ga0182005_1000023 3300015265 Bacteria 246328
97 Ga0209258_100068 3300025242 Bacteria 286288
98 Ga0209646_1003432 3300025246 Bacteria 3135
99 Ga0209148_1000182 3300025254 Bacteria 123558
100 Ga0209673_1000096 3300025273 Bacteria 194819
101 Ga0209564_1000127 3300025295 Bacteria 196942
102 Ga0209564_1000479 3300025295 Bacteria 66470
103 Ga0209564_1000867 3300025295 Bacteria 40272
104 Ga0209758_1000332 3300025297 Bacteria 88380
105 Ga0209758_1002172 3300025297 Bacteria 20612
106 Ga0209758_1057781 3300025297 Bacteria 1301
107 Ga0207426_1029000 3300025302 Unclassified 1830
108 Ga0207697_10233676 3300025315 Bacteria 812
109 Ga0207692_10204989 3300025898 Bacteria 1161
110 Ga0207642_10267342 3300025899 Unclassified 978
111 Ga0207699_10000073 3300025906 Bacteria 80499
112 Ga0207645_10001159 3300025907 Bacteria 21794
113 Ga0207705_10022297 3300025909 Bacteria 4516
114 Ga0207705_10071130 3300025909 Bacteria 2521
115 Ga0207654_10231816 3300025911 Bacteria 1230
116 Ga0207707_10135275 3300025912 Bacteria 2155
117 Ga0207695_10482789 3300025913 Bacteria 1121
118 Ga0207671_10455781 3300025914 Unclassified 1019
119 Ga0207657_10240674 3300025919 Bacteria 1445
120 Ga0207649_10034070 3300025920 Bacteria 3048
121 Ga0207649_10407502 3300025920 Unclassified 1018
122 Ga0207652_10000276 3300025921 Bacteria 53325
123 Ga0207646_10024157 3300025922 Bacteria 5572
124 Ga0207681_10171418 3300025923 Bacteria 1645
125 Ga0207650_10147074 3300025925 Bacteria 1857
126 Ga0207659_10066811 3300025926 Bacteria 2611
127 Ga0207706_10053033 3300025933 Bacteria 3580
128 Ga0207686_10181756 3300025934 Bacteria 1492
129 Ga0207686_10430209 3300025934 Bacteria 1011
130 Ga0207691_10186798 3300025940 Bacteria 1809
131 Ga0207691_10209314 3300025940 Bacteria 1695
132 Ga0207679_10002827 3300025945 Bacteria 10769
133 Ga0207679_10089524 3300025945 Unclassified 2376
134 Ga0207667_10117925 3300025949 Bacteria 2735
135 Ga0207651_10033853 3300025960 Unclassified 3301
136 Ga0207651_10443694 3300025960 Bacteria 1112
137 Ga0207640_10241494 3300025981 Bacteria 1396
138 Ga0207640_10576556 3300025981 Bacteria 949
139 Ga0207677_10065095 3300026023 Bacteria 2542
140 Ga0207677_10093734 3300026023 Unclassified 2190
141 Ga0207639_10081570 3300026041 Bacteria 2562
142 Ga0207639_10109289 3300026041 Unclassified 2250
143 Ga0207678_10108248 3300026067 Bacteria 2371
144 Ga0207702_10095660 3300026078 Bacteria 2610
145 Ga0207648_10007573 3300026089 Bacteria 10652
146 Ga0207676_10008148 3300026095 Bacteria 7451
147 Ga0207674_10005366 3300026116 Bacteria 15246
148 Ga0207674_10070317 3300026116 Bacteria 3519
149 Ga0207675_100007143 3300026118 Bacteria 10555
150 Ga0268264_10041311 3300028381 Bacteria 3815
151 Ga0268264_10455758 3300028381 Bacteria 1240
152 Ga0265323_10062058 3300028653 Bacteria 1298
153 Ga0265328_10026150 3300031239 Bacteria 2196
154 Ga0265331_10000582 3300031250 Bacteria 32742
155 Ga0265327_10000038 3300031251 Bacteria 292416
156 Ga0265316_10028073 3300031344 Bacteria 4647
157 Ga0307513_10055738 3300031456 Bacteria 4227
158 Ga0307508_10031203 3300031616 Bacteria 4816
159 Ga0307508_10131565 3300031616 Unclassified 2106
160 Ga0265314_10009821 3300031711 Bacteria 8036
161 Ga0373927_0061593 3300035695 Bacteria 2428
162 Ga0373933_0052327 3300035724 Bacteria 2443
163 Ga0373937_0086622 3300036401 Bacteria 2898
164 Ga0373925_0172740 3300037068 Bacteria 1707
165 Ga0395899_0000626 3300037312 Bacteria 36835
166 Ga0395900_0168953 3300037418 Bacteria 2227
167 Ga0395898_0001310 3300037466 Bacteria 36272
168 Ga0395898_0407857 3300037466 Bacteria 1295
169 Ga0395905_0029085 3300037471 Bacteria 5208
170 Ga0395905_0436268 3300037471 Bacteria 1207
171 Ga0395901_0023956 3300038443 Bacteria 6262
172 Ga0395901_0151416 3300038443 Bacteria 2437
173 Ga0400483_156832 3300039062 Bacteria 3739
174 Ga0451804_1168332 3300041463 Bacteria 1274
175 Ga0439431_0004862 3300041997 Bacteria 2961
176 Ga0439449_0141265 3300042007 Bacteria 896
177 Ga0439457_001239 3300042014 Bacteria 7668
178 Ga0466969_0000033 3300044656 Bacteria 82227
179 Ga0466972_0000091 3300044658 Bacteria 81829
180 Ga0466966_0000846 3300044684 Bacteria 19501
181 Ga0466961_0055961 3300044693 Bacteria 2514
182 Ga0466957_0064419 3300044842 Bacteria 2255
183 Ga0466959_0000048 3300045049 Bacteria 83528
184 Ga0495608_0015191 3300046511 Bacteria 5343
185 Ga0495618_0074101 3300046514 Bacteria 2168
186 Ga0495630_0032304 3300046517 Bacteria 3900
187 Ga0495652_0189431 3300046529 Bacteria 1571
188 Ga0495622_0190704 3300046557 Bacteria 916
189 Ga0495668_0000414 3300046616 Bacteria 55752
190 Ga0495668_0012918 3300046616 Bacteria 4945
191 Ga0495668_0023659 3300046616 Bacteria 3501
192 Ga0495634_0055616 3300046642 Bacteria 2646
193 Ga0495635_0074728 3300046663 Bacteria 2322
194 Ga0495600_0128006 3300046809 Bacteria 1651
195 Ga0495636_0000082 3300047318 Bacteria 40011
196 Ga0495674_0132482 3300047319 Bacteria 2100
197 Ga0495684_0070469 3300047471 Bacteria 2658
198 Ga0495686_0013729 3300047472 Bacteria 5612
199 Ga0495686_0021366 3300047472 Bacteria 4300
200 Ga0496109_0232563 3300048912 Bacteria 1734
201 Ga0496111_0100525 3300048914 Bacteria 2124
202 Ga0496114_0006239 3300048917 Bacteria 9383
203 Ga0501034_0364252 3300049571 Bacteria 1372
204 Ga0501047_0025234 3300049581 Bacteria 5711
205 Ga0501047_0464513 3300049581 Bacteria 1094
206 Ga0501035_0041208 3300049822 Bacteria 4171
207 Ga0501035_0229580 3300049822 Bacteria 1582
208 Ga0501044_0006959 3300049823 Bacteria 12445
209 nmdc:mga0k408_138381_c1 3300050493 Bacteria 1447
210 nmdc:mga0k408_271597_c1 3300050493 Bacteria 1012
211 nmdc:mga05p37_2112_c1 3300050507 Bacteria 4587
212 nmdc:mga0n895_410326_c1 3300050512 Bacteria 1370
213 Ga0500578_0000029 3300053086 Bacteria 140078
214 Ga0500578_0063064 3300053086 Bacteria 2365
215 Ga0500644_0000176 3300053088 Bacteria 40998
216 Ga0500646_0002030 3300053090 Bacteria 5284
217 Ga0500646_0018120 3300053090 Bacteria 1852
218 Ga0500583_0000002 3300053092 Bacteria 232826
219 Ga0500641_0015306 3300053096 Unclassified 2844
220 Ga0500553_091794 3300053101 Bacteria 1334
221 Ga0500556_0123759 3300053104 Bacteria 1010
222 Ga0500569_002341 3300053109 Bacteria 3719
223 Ga0500607_038782 3300053121 Bacteria 2591
224 Ga0500652_013377 3300053131 Unclassified 2904
225 Ga0500655_020978 3300053133 Bacteria 1223
226 Ga0500658_0001467 3300053134 Bacteria 9437
227 Ga0500559_0001550 3300053136 Bacteria 12870
228 Ga0500573_0086017 3300053140 Bacteria 1782
229 Ga0500588_0116152 3300053146 Bacteria 939
230 Ga0500590_032820 3300053148 Unclassified 2693
231 Ga0500616_0010500 3300053153 Bacteria 5538
232 Ga0500616_0034704 3300053153 Unclassified 2746
233 Ga0500627_0007710 3300053158 Unclassified 3772
234 Ga0500627_0029876 3300053158 Bacteria 2277
235 Ga0500633_0000299 3300053160 Bacteria 7291
236 Ga0500634_0027992 3300053161 Bacteria 3070
237 Ga0500636_0035544 3300053177 Bacteria 2948
238 Ga0500636_0231933 3300053177 Bacteria 954
239 Ga0500645_026489 3300053730 Bacteria 1764
240 Ga0500661_008696 3300055283 Unclassified 1868
241 Ga0587079_001938 3300059647 Unclassified 2430
242 2738728329 2738541278 Bacteria 9755573
243 2819572517 2818991442 Bacteria 8318214
244 2819577025 2818991442 Bacteria 8318214
245 2904472211 2904467357 Bacteria 8057758
246 2911143799 2911138879 Bacteria 5811561
247 2929922724 2929921140 Bacteria 8649150
248 JGI24740J21852_10002780
249 JGI25153J46596_10027470
250 rootL2_10348146
251 rootH1_10017103
252 Ga0055542_1014369
253 Ga0055526_1000389
254 Ga0055526_1002936
255 Ga0055526_1018044
256 Ga0055528_1000086
257 Ga0070658_10083565
258 Ga0070658_10133346
259 Ga0070683_100268217
260 Ga0070683_100361914
261 Ga0068869_100006834
262 Ga0070680_100120909
263 Ga0070680_100135073
264 Ga0068868_100011757
265 Ga0070660_100514363
266 Ga0070689_100114132
267 Ga0070661_100067743
268 Ga0070669_100100406
269 Ga0070669_100227689
270 Ga0070675_100034239
271 Ga0070674_100027638
272 Ga0070674_100033095
273 Ga0070673_100034429
274 Ga0070673_100205895
275 Ga0070688_100063196
276 Ga0070703_10000217
277 Ga0070709_10000070
278 Ga0070681_10241426
279 Ga0070681_10451983
280 Ga0068867_100050777
281 Ga0068867_100083177
282 Ga0070685_10298004
283 Ga0070707_100009319
284 Ga0070698_100091010
285 Ga0070699_100158418
286 Ga0070679_100000386
287 Ga0070684_100033359
288 Ga0068853_100061808
289 Ga0068853_100126806
290 Ga0068855_100134681
291 Ga0068855_100253216
292 Ga0070664_100020414
293 Ga0068857_100035072
294 Ga0068857_100145579
295 Ga0068854_100038414
296 Ga0068854_100277859
297 Ga0068856_100016428
298 Ga0068859_100279652
299 Ga0068859_100834027
300 Ga0068864_100002481
301 Ga0068866_10272563
302 Ga0068861_100038939
303 Ga0068860_100079957
304 Ga0068860_100507038
305 Ga0081540_1002102
306 Ga0070717_10094421
307 Ga0075366_10113429
308 Ga0068871_100830827
309 Ga0068865_100351514
310 Ga0097620_100279667
311 Ga0097620_100833999
312 Ga0114129_10001316
313 Ga0105241_10096200
314 Ga0105241_10361006
315 Ga0105242_10121869
316 Ga0105242_10713557
317 Ga0105237_10006672
318 Ga0105249_10372439
319 Ga0157373_10000489
320 Ga0157371_10000318
321 Ga0157371_10002305
322 Ga0157371_10006424
323 Ga0157371_10202425
324 Ga0157370_10024532
325 Ga0157370_10388438
326 Ga0157369_10034794
327 Ga0157369_10218308
328 Ga0157369_10223402
329 Ga0157369_10438233
330 Ga0157374_10004425
331 Ga0157374_10032973
332 Ga0157378_10164097
333 Ga0163162_10009235
334 Ga0157372_10010260
335 Ga0157372_10430970
336 Ga0157375_10062052
337 Ga0163163_10001079
338 Ga0157380_10688938
339 Ga0157380_10978171
340 Ga0157377_10003694
341 Ga0157377_10043994
342 Ga0157379_10145420
343 Ga0182005_1000023
344 Ga0209258_100068
345 Ga0209646_1003432
346 Ga0209148_1000182
347 Ga0209673_1000096
348 Ga0209564_1000127
349 Ga0209564_1000479
350 Ga0209564_1000867
351 Ga0209758_1000332
352 Ga0209758_1002172
353 Ga0209758_1057781
354 Ga0207426_1029000
355 Ga0207697_10233676
356 Ga0207692_10204989
357 Ga0207642_10267342
358 Ga0207699_10000073
359 Ga0207645_10001159
360 Ga0207705_10022297
361 Ga0207705_10071130
362 Ga0207654_10231816
363 Ga0207707_10135275
364 Ga0207695_10482789
365 Ga0207671_10455781
366 Ga0207657_10240674
367 Ga0207649_10034070
368 Ga0207649_10407502
369 Ga0207652_10000276
370 Ga0207646_10024157
371 Ga0207681_10171418
372 Ga0207650_10147074
373 Ga0207659_10066811
374 Ga0207706_10053033
375 Ga0207686_10181756
376 Ga0207686_10430209
377 Ga0207691_10186798
378 Ga0207691_10209314
379 Ga0207679_10002827
380 Ga0207679_10089524
381 Ga0207667_10117925
382 Ga0207651_10033853
383 Ga0207651_10443694
384 Ga0207640_10241494
385 Ga0207640_10576556
386 Ga0207677_10065095
387 Ga0207677_10093734
388 Ga0207639_10081570
389 Ga0207639_10109289
390 Ga0207678_10108248
391 Ga0207702_10095660
392 Ga0207648_10007573
393 Ga0207676_10008148
394 Ga0207674_10005366
395 Ga0207674_10070317
396 Ga0207675_100007143
397 Ga0268264_10041311
398 Ga0268264_10455758
399 Ga0265323_10062058
400 Ga0265328_10026150
401 Ga0265331_10000582
402 Ga0265327_10000038
403 Ga0265316_10028073
404 Ga0307513_10055738
405 Ga0307508_10031203
406 Ga0307508_10131565
407 Ga0265314_10009821
408 Ga0373927_0061593
409 Ga0373933_0052327
410 Ga0373937_0086622
411 Ga0373925_0172740
412 Ga0395899_0000626
413 Ga0395900_0168953
414 Ga0395898_0001310
415 Ga0395898_0407857
416 Ga0395905_0029085
417 Ga0395905_0436268
418 Ga0395901_0023956
419 Ga0395901_0151416
420 Ga0400483_156832
421 Ga0451804_1168332
422 Ga0439431_0004862
423 Ga0439449_0141265
424 Ga0439457_001239
425 Ga0466969_0000033
426 Ga0466972_0000091
427 Ga0466966_0000846
428 Ga0466961_0055961
429 Ga0466957_0064419
430 Ga0466959_0000048
431 Ga0495608_0015191
432 Ga0495618_0074101
433 Ga0495630_0032304
434 Ga0495652_0189431
435 Ga0495622_0190704
436 Ga0495668_0000414
437 Ga0495668_0012918
438 Ga0495668_0023659
439 Ga0495634_0055616
440 Ga0495635_0074728
441 Ga0495600_0128006
442 Ga0495636_0000082
443 Ga0495674_0132482
444 Ga0495684_0070469
445 Ga0495686_0013729
446 Ga0495686_0021366
447 Ga0496109_0232563
448 Ga0496111_0100525
449 Ga0496114_0006239
450 Ga0501034_0364252
451 Ga0501047_0025234
452 Ga0501047_0464513
453 Ga0501035_0041208
454 Ga0501035_0229580
455 Ga0501044_0006959
456 nmdc:mga0k408_138381_c1
457 nmdc:mga0k408_271597_c1
458 nmdc:mga05p37_2112_c1
459 nmdc:mga0n895_410326_c1
460 Ga0500578_0000029
461 Ga0500578_0063064
462 Ga0500644_0000176
463 Ga0500646_0002030
464 Ga0500646_0018120
465 Ga0500583_0000002
466 Ga0500641_0015306
467 Ga0500553_091794
468 Ga0500556_0123759
469 Ga0500569_002341
470 Ga0500607_038782
471 Ga0500652_013377
472 Ga0500655_020978
473 Ga0500658_0001467
474 Ga0500559_0001550
475 Ga0500573_0086017
476 Ga0500588_0116152
477 Ga0500590_032820
478 Ga0500616_0010500
479 Ga0500616_0034704
480 Ga0500627_0007710
481 Ga0500627_0029876
482 Ga0500633_0000299
483 Ga0500634_0027992
484 Ga0500636_0035544
485 Ga0500636_0231933
486 Ga0500645_026489
487 Ga0500661_008696
488 Ga0587079_001938
489 2738728329
490 2819572517
491 2819577025
492 2904472211
493 2911143799
494 2929922724

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00535

Glycos_transf_2

Glycosyl transferase family 2

28

191

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mm1-assembly1.cif.gz_A dolichyl phosphate mannose synthase in complex with gdp and dolichyl phosphate mannose 0.7847 26 259
4dec-assembly1.cif.gz_A-2 crystal structure of glucosyl-3-phosphoglycerate synthase from mycobacterium tuberculosis in complex with mn2+, uridine-diphosphate (udp) and phosphoglyceric acid (pga) 0.7588 24 253
5mm0-assembly1.cif.gz_A dolichyl phosphate mannose synthase in complex with gdp-mannose and mn2+ (donor complex) 0.7473 23 259
5jqx-assembly1.cif.gz_A crystal structure of glucosyl-3-phosphoglycerate synthase from mycobacterium tuberculosis in complex with phosphoglyceric acid (pga) - gpgs*pga 0.7398 6 253
5jud-assembly1.cif.gz_A-2 crystal structure of glucosyl-3-phosphoglycerate synthase from mycobacterium tuberculosis in complex with uridine-diphosphate (udp) - gpgs*udp 0.7347 7 253
ID Description Score Start End Superfamily
af_P9WMY1_2_214_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8735 27 245 3.90.550.10
af_P9WMY1_2_214_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8504 27 245 3.90.550.10
af_O53493_586_855_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8474 23 263 3.90.550.10
af_P40350_49_327_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8264 25 255 3.90.550.10
af_O06376_3_236_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8255 25 247 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A3B9F0K6-F1-model_v4 Glycosyl transferase family 2 0.9894 60 264 GO:0016740
AF-A0A522EZK7-F1-model_v4 Glycosyltransferase family 2 protein 0.9886 164 266 GO:0016740
AF-A0A2V5PW17-F1-model_v4 Glycosyl transferase family 2 0.9876 84 261 GO:0016740
AF-A0A645F277-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.984 108 266 GO:0016020
AF-A0A1F8H8Q9-F1-model_v4 Glycosyl transferase family 2 0.9824 25 257 GO:0016757

Map