F357620

General Info

Members Datasets Scaffolds Average Seq Length
245 143 490 444

Family's Representative Sequence

Representative Sequence 3300046472|Ga0495580_0148533|Ga0495580_0148533_10_1524
Length 504
Sequence MKMSRPIRLAHGLERVLELWMKDKNPGKTVTVDESSKGNEPSQQERQETDLSQNRVKEPTPAPPGVERRFRQTDLPAHFIERRKHPRISTEQPPLAAPPRLEDYEAIIGKPELDEIRFLARHVRGKTVKMVNSTAVGGGVAEILNRLIPLMNELEVSTRWDVITGGNDFFEVTKGFHNALHGGDYNLTPQIKDLFMAYSEQNRKRMEFAEDLFVIHDPQPVGLIRSKSPKRGKWIWRCHIDLSNPHPGVWDFLKPMVEQYDATVFSAAAFTRQLASPQYLFYPSIDPLSEKNKELPEEYVNKVCDDFGIDRSRPVIMQISRFDRLKDPVGVVESYKLVKKYVDCQLVLAGGGATDDPEGAIVLQEVMEAAGDDPDIIVLNLPPWSALEINALQRASTVIVQKSLKEGFGLTVTEGLWKEKPVVAGAVGGITTQIVHKLTGVLVHSVEGCAYQIRYLLTHPEFAAQLGKNGKAHAKENFLITVNLKRWLVLFQILLGMAKPNAML

Samples

Sample ID Description Type Environment
1 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
75 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
76 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
79 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
82 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
83 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
85 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
86 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
87 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
88 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
89 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
90 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
91 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
92 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
93 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
94 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
98 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
106 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
109 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
110 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
113 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
114 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
115 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
116 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
117 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
132 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
133 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
134 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
135 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
136 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
137 3300059509 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 54R_CD_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300059513 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 59R_AW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300059605 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 71R_SD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
140 3300059626 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 173R_CD_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300059630 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 165R_SD_T3_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
142 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
143 3300059644 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 38R_AD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.65
Metatranscriptomes 7.35
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.27
Rhizosphere 96.73
Stem 0
Stem Tuber 0
Unclassified 22.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495580_0148533 3300046472 Bacteria 1624
2 LJNas_1000005 3300000546 Bacteria 29297
3 Ga0058862_10078795 3300004803 Bacteria 2858
4 Ga0070683_100006315 3300005329 Bacteria 9942
5 Ga0070683_100048304 3300005329 Bacteria 3934
6 Ga0068869_100017116 3300005334 Bacteria 4906
7 Ga0070680_100067984 3300005336 Bacteria 2924
8 Ga0070680_100085092 3300005336 Unclassified 2612
9 Ga0070714_100002222 3300005435 Bacteria 14300
10 Ga0070714_100123185 3300005435 Bacteria 2308
11 Ga0070713_100000909 3300005436 Bacteria 18927
12 Ga0070713_100006147 3300005436 Bacteria 8292
13 Ga0070713_100023719 3300005436 Bacteria 4767
14 Ga0070713_100024594 3300005436 Bacteria 4694
15 Ga0070713_100156025 3300005436 Bacteria 2034
16 Ga0070713_100173395 3300005436 Bacteria 1933
17 Ga0070710_10002822 3300005437 Bacteria 8285
18 Ga0070710_10113452 3300005437 Unclassified 1631
19 Ga0070711_100000291 3300005439 Bacteria 26041
20 Ga0070711_100018099 3300005439 Bacteria 4495
21 Ga0070708_100020533 3300005445 Bacteria 5571
22 Ga0070708_100020764 3300005445 Bacteria 5545
23 Ga0070681_10056673 3300005458 Unclassified 3899
24 Ga0070681_10058564 3300005458 Bacteria 3832
25 Ga0070681_10099870 3300005458 Bacteria 2848
26 Ga0070706_100007862 3300005467 Bacteria 9967
27 Ga0070706_100097474 3300005467 Bacteria 2731
28 Ga0070707_100001340 3300005468 Bacteria 24225
29 Ga0070707_100009545 3300005468 Bacteria 9013
30 Ga0070698_100000590 3300005471 Bacteria 39001
31 Ga0070698_100021962 3300005471 Bacteria 6680
32 Ga0070699_100000178 3300005518 Bacteria 61351
33 Ga0070679_100148350 3300005530 Unclassified 2323
34 Ga0070697_100000440 3300005536 Bacteria 31848
35 Ga0070697_100004100 3300005536 Bacteria 11166
36 Ga0068853_100031465 3300005539 Bacteria 4488
37 Ga0070696_100014421 3300005546 Bacteria 5300
38 Ga0070665_100062679 3300005548 Unclassified 3727
39 Ga0068855_100299772 3300005563 Bacteria 1780
40 Ga0068854_100012857 3300005578 Bacteria 5482
41 Ga0068856_100014253 3300005614 Bacteria 7686
42 Ga0068852_100195122 3300005616 Bacteria 1913
43 Ga0068858_100002561 3300005842 Bacteria 18317
44 Ga0068860_100034341 3300005843 Unclassified 4863
45 Ga0070717_10002115 3300006028 Bacteria 13932
46 Ga0070717_10003600 3300006028 Bacteria 11114
47 Ga0070715_10039579 3300006163 Unclassified 1965
48 Ga0070716_100001531 3300006173 Bacteria 10353
49 Ga0070716_100097010 3300006173 Bacteria 1798
50 Ga0070716_100147053 3300006173 Bacteria 1511
51 Ga0070716_100148388 3300006173 Unclassified 1505
52 Ga0070712_100003994 3300006175 Bacteria 9067
53 Ga0070712_100010514 3300006175 Bacteria 5842
54 Ga0070712_100014558 3300006175 Bacteria 5048
55 Ga0070712_100017889 3300006175 Bacteria 4593
56 Ga0070712_100051477 3300006175 Unclassified 2869
57 Ga0070712_100090400 3300006175 Bacteria 2241
58 Ga0075434_100007206 3300006871 Bacteria 10285
59 Ga0075436_100001239 3300006914 Bacteria 17347
60 Ga0075436_100007795 3300006914 Bacteria 7323
61 Ga0075436_100012874 3300006914 Bacteria 5735
62 Ga0075435_100045562 3300007076 Bacteria 3516
63 Ga0099794_10003400 3300007265 Bacteria 6065
64 Ga0099794_10008037 3300007265 Bacteria 4365
65 Ga0099794_10053339 3300007265 Unclassified 1950
66 Ga0099794_10073221 3300007265 Bacteria 1681
67 Ga0105240_10024936 3300009093 Bacteria 7872
68 Ga0105240_10053945 3300009093 Bacteria 5041
69 Ga0105245_10043281 3300009098 Unclassified 4016
70 Ga0114129_10092246 3300009147 Bacteria 4196
71 Ga0105248_10144910 3300009177 Bacteria 2680
72 Ga0105237_10152632 3300009545 Bacteria 2306
73 Ga0105237_10177208 3300009545 Unclassified 2132
74 Ga0105238_10040110 3300009551 Bacteria 4746
75 Ga0105238_10064708 3300009551 Unclassified 3656
76 Ga0105239_10011207 3300010375 Bacteria 10005
77 Ga0157373_10010325 3300013100 Bacteria 6877
78 Ga0157370_10021309 3300013104 Bacteria 6460
79 Ga0157370_10258362 3300013104 Unclassified 1610
80 Ga0157369_10001413 3300013105 Bacteria 29512
81 Ga0157369_10059356 3300013105 Bacteria 4125
82 Ga0157369_10086741 3300013105 Bacteria 3343
83 Ga0157369_10088645 3300013105 Bacteria 3303
84 Ga0157374_10175575 3300013296 Bacteria 2091
85 Ga0157378_10200545 3300013297 Bacteria 1887
86 Ga0163162_10005510 3300013306 Bacteria 12235
87 Ga0163162_10201115 3300013306 Bacteria 2121
88 Ga0157372_10073619 3300013307 Unclassified 3851
89 Ga0157376_10022697 3300014969 Unclassified 4897
90 Ga0197907_10371422 3300020069 Bacteria 1725
91 Ga0224712_10005861 3300022467 Bacteria 3460
92 Ga0207692_10016171 3300025898 Bacteria 3297
93 Ga0207647_10001316 3300025904 Bacteria 19075
94 Ga0207685_10011354 3300025905 Bacteria 2674
95 Ga0207685_10036044 3300025905 Unclassified 1810
96 Ga0207684_10001327 3300025910 Bacteria 27160
97 Ga0207684_10082883 3300025910 Bacteria 2731
98 Ga0207707_10080059 3300025912 Unclassified 2853
99 Ga0207707_10088550 3300025912 Bacteria 2704
100 Ga0207695_10161219 3300025913 Unclassified 2174
101 Ga0207693_10000016 3300025915 Bacteria 145892
102 Ga0207693_10021949 3300025915 Bacteria 5075
103 Ga0207693_10027551 3300025915 Unclassified 4492
104 Ga0207693_10037386 3300025915 Bacteria 3827
105 Ga0207693_10103690 3300025915 Unclassified 2231
106 Ga0207663_10004657 3300025916 Bacteria 6842
107 Ga0207663_10005023 3300025916 Bacteria 6641
108 Ga0207660_10072706 3300025917 Bacteria 2505
109 Ga0207652_10017903 3300025921 Bacteria 5805
110 Ga0207646_10001208 3300025922 Bacteria 32497
111 Ga0207646_10002157 3300025922 Bacteria 23495
112 Ga0207646_10017105 3300025922 Bacteria 6792
113 Ga0207687_10038821 3300025927 Bacteria 3256
114 Ga0207700_10000566 3300025928 Bacteria 21734
115 Ga0207700_10014721 3300025928 Bacteria 5135
116 Ga0207700_10050865 3300025928 Unclassified 3090
117 Ga0207700_10072156 3300025928 Bacteria 2661
118 Ga0207700_10076825 3300025928 Unclassified 2593
119 Ga0207664_10028190 3300025929 Bacteria 4265
120 Ga0207664_10038238 3300025929 Bacteria 3720
121 Ga0207664_10066542 3300025929 Unclassified 2889
122 Ga0207664_10150916 3300025929 Unclassified 1974
123 Ga0207664_10171615 3300025929 Bacteria 1856
124 Ga0207665_10000168 3300025939 Bacteria 44472
125 Ga0207665_10000310 3300025939 Bacteria 33756
126 Ga0207665_10005793 3300025939 Bacteria 8218
127 Ga0207665_10019658 3300025939 Bacteria 4441
128 Ga0207665_10083698 3300025939 Bacteria 2201
129 Ga0207665_10089606 3300025939 Unclassified 2131
130 Ga0207689_10000166 3300025942 Bacteria 57369
131 Ga0207667_10010002 3300025949 Bacteria 11123
132 Ga0207667_10121044 3300025949 Unclassified 2697
133 Ga0207667_10247018 3300025949 Bacteria 1826
134 Ga0207703_10012643 3300026035 Bacteria 6582
135 Ga0207639_10062782 3300026041 Unclassified 2874
136 Ga0207639_10116509 3300026041 Unclassified 2187
137 Ga0207702_10004275 3300026078 Bacteria 12746
138 Ga0209588_1003381 3300027671 Bacteria 4422
139 Ga0209588_1007545 3300027671 Bacteria 3202
140 Ga0265354_1001329 3300028016 Unclassified 3617
141 Ga0265354_1002737 3300028016 Bacteria 2122
142 Ga0265326_10012119 3300028558 Bacteria 2537
143 Ga0265322_10000066 3300028654 Bacteria 51953
144 Ga0265338_10035502 3300028800 Unclassified 4791
145 Ga0265770_1002332 3300030878 Bacteria 2582
146 Ga0265770_1003593 3300030878 Bacteria 2108
147 Ga0265760_10009402 3300031090 Bacteria 2794
148 Ga0265760_10035575 3300031090 Unclassified 1475
149 Ga0265316_10001431 3300031344 Bacteria 25681
150 Ga0373926_0005021 3300035083 Bacteria 4347
151 Ga0373934_0002069 3300035086 Bacteria 7366
152 Ga0373923_0005494 3300035111 Bacteria 4306
153 Ga0373936_0005345 3300035113 Bacteria 4834
154 Ga0373945_0008521 3300035116 Unclassified 3344
155 Ga0373954_0000237 3300035118 Bacteria 20213
156 Ga0373956_0025209 3300035119 Bacteria 2568
157 Ga0373943_0006695 3300035170 Bacteria 5171
158 Ga0373943_0033582 3300035170 Bacteria 2445
159 Ga0373946_0001870 3300035171 Bacteria 7351
160 Ga0373955_0003666 3300035172 Bacteria 6764
161 Ga0373924_0002168 3300035410 Bacteria 6570
162 Ga0373924_0003821 3300035410 Bacteria 5211
163 Ga0373935_0002518 3300035692 Bacteria 10503
164 Ga0373935_0025033 3300035692 Unclassified 3677
165 Ga0373935_0064972 3300035692 Unclassified 2340
166 Ga0373927_0000548 3300035695 Bacteria 28635
167 Ga0373927_0001701 3300035695 Bacteria 16430
168 Ga0373927_0006240 3300035695 Bacteria 8137
169 Ga0373927_0079014 3300035695 Bacteria 2131
170 Ga0373947_0006095 3300035725 Bacteria 7021
171 Ga0373947_0006330 3300035725 Bacteria 6880
172 Ga0373947_0006679 3300035725 Bacteria 6695
173 Ga0373947_0009593 3300035725 Bacteria 5554
174 Ga0373947_0017176 3300035725 Bacteria 4161
175 Ga0373937_0001760 3300036401 Bacteria 18230
176 Ga0373937_0115988 3300036401 Unclassified 2494
177 Ga0373937_0125266 3300036401 Unclassified 2396
178 Ga0373925_0000082 3300037068 Bacteria 101345
179 Ga0373925_0000125 3300037068 Bacteria 83446
180 Ga0373925_0014145 3300037068 Bacteria 5776
181 Ga0373925_0042165 3300037068 Unclassified 3385
182 Ga0373925_0153540 3300037068 Bacteria 1809
183 Ga0453683_0002077 3300044673 Bacteria 16037
184 Ga0453683_0019541 3300044673 Bacteria 4338
185 Ga0453683_0021231 3300044673 Unclassified 4146
186 Ga0466963_0022842 3300044694 Unclassified 3965
187 Ga0453684_0000104 3300044712 Bacteria 365431
188 Ga0466957_0000102 3300044842 Bacteria 34527
189 Ga0466959_0039873 3300045049 Unclassified 3472
190 Ga0451576_0015136 3300045051 Bacteria 8562
191 Ga0466958_0028836 3300045836 Unclassified 3293
192 Ga0466967_0039206 3300045976 Unclassified 4071
193 Ga0466967_0068360 3300045976 Bacteria 3172
194 Ga0495592_0045339 3300046454 Bacteria 3281
195 Ga0495603_0065120 3300046455 Bacteria 2148
196 Ga0495629_0004647 3300046459 Bacteria 10281
197 Ga0495653_0110834 3300046463 Bacteria 1972
198 Ga0495580_0000774 3300046472 Bacteria 27522
199 Ga0495580_0034921 3300046472 Bacteria 3617
200 Ga0495580_0035157 3300046472 Unclassified 3603
201 Ga0495580_0049540 3300046472 Bacteria 2972
202 Ga0495580_0062604 3300046472 Bacteria 2610
203 Ga0495582_0087588 3300046473 Bacteria 1734
204 Ga0495662_0024135 3300046476 Bacteria 2935
205 Ga0495608_0025872 3300046511 Bacteria 4006
206 Ga0495630_0008924 3300046517 Bacteria 7196
207 Ga0495665_0042907 3300046531 Bacteria 2406
208 Ga0495665_0049454 3300046531 Unclassified 2229
209 Ga0495623_0006552 3300046679 Bacteria 7580
210 Ga0495647_0030922 3300046681 Bacteria 1989
211 Ga0495658_0062614 3300046683 Bacteria 2139
212 Ga0495669_0049922 3300046684 Unclassified 1875
213 Ga0495613_0061825 3300046689 Bacteria 2742
214 Ga0495613_0104656 3300046689 Unclassified 2043
215 Ga0495581_0004330 3300047315 Bacteria 8194
216 Ga0495604_0000176 3300047317 Bacteria 56911
217 Ga0495604_0050717 3300047317 Unclassified 3221
218 Ga0495684_0003211 3300047471 Bacteria 12824
219 Ga0495602_0012630 3300048088 Bacteria 8663
220 Ga0496102_0152381 3300048905 Unclassified 2173
221 Ga0496105_0003486 3300048908 Bacteria 11642
222 Ga0496111_0032494 3300048914 Archaea 3721
223 Ga0496112_0034755 3300048915 Bacteria 4906
224 Ga0496112_0061998 3300048915 Unclassified 3687
225 Ga0496113_0000270 3300048916 Bacteria 24476
226 Ga0496113_0192174 3300048916 Unclassified 1620
227 Ga0496115_0025206 3300048918 Bacteria 4629
228 nmdc:mga0n895_3198_c1 3300050512 Bacteria 13100
229 nmdc:mga0rr50_213617_c1 3300050513 Unclassified 1590
230 nmdc:mga08x19_10948_c1 3300050514 Bacteria 5457
231 nmdc:mga08x19_2467_c1 3300050514 Bacteria 11254
232 nmdc:mga08x19_52266_c1 3300050514 Unclassified 2627
233 nmdc:mga08x19_811_c1 3300050514 Bacteria 19880
234 Ga0495601_0017595 3300053077 Bacteria 4341
235 Ga0587066_000680 3300059490 Unclassified 2957
236 Ga0587073_0005136 3300059492 Bacteria 1929
237 Ga0587082_000610 3300059504 Bacteria 3156
238 Ga0587083_0000389 3300059505 Unclassified 3728
239 Ga0587089_002416 3300059509 Bacteria 1890
240 Ga0587094_002355 3300059513 Bacteria 1948
241 Ga0587106_000431 3300059605 Bacteria 2906
242 Ga0587115_000478 3300059626 Unclassified 2968
243 Ga0587128_000289 3300059630 Bacteria 3352
244 Ga0587067_005562 3300059640 Bacteria 1714
245 Ga0587075_000192 3300059644 Bacteria 3987
246 Ga0495580_0148533
247 LJNas_1000005
248 Ga0058862_10078795
249 Ga0070683_100006315
250 Ga0070683_100048304
251 Ga0068869_100017116
252 Ga0070680_100067984
253 Ga0070680_100085092
254 Ga0070714_100002222
255 Ga0070714_100123185
256 Ga0070713_100000909
257 Ga0070713_100006147
258 Ga0070713_100023719
259 Ga0070713_100024594
260 Ga0070713_100156025
261 Ga0070713_100173395
262 Ga0070710_10002822
263 Ga0070710_10113452
264 Ga0070711_100000291
265 Ga0070711_100018099
266 Ga0070708_100020533
267 Ga0070708_100020764
268 Ga0070681_10056673
269 Ga0070681_10058564
270 Ga0070681_10099870
271 Ga0070706_100007862
272 Ga0070706_100097474
273 Ga0070707_100001340
274 Ga0070707_100009545
275 Ga0070698_100000590
276 Ga0070698_100021962
277 Ga0070699_100000178
278 Ga0070679_100148350
279 Ga0070697_100000440
280 Ga0070697_100004100
281 Ga0068853_100031465
282 Ga0070696_100014421
283 Ga0070665_100062679
284 Ga0068855_100299772
285 Ga0068854_100012857
286 Ga0068856_100014253
287 Ga0068852_100195122
288 Ga0068858_100002561
289 Ga0068860_100034341
290 Ga0070717_10002115
291 Ga0070717_10003600
292 Ga0070715_10039579
293 Ga0070716_100001531
294 Ga0070716_100097010
295 Ga0070716_100147053
296 Ga0070716_100148388
297 Ga0070712_100003994
298 Ga0070712_100010514
299 Ga0070712_100014558
300 Ga0070712_100017889
301 Ga0070712_100051477
302 Ga0070712_100090400
303 Ga0075434_100007206
304 Ga0075436_100001239
305 Ga0075436_100007795
306 Ga0075436_100012874
307 Ga0075435_100045562
308 Ga0099794_10003400
309 Ga0099794_10008037
310 Ga0099794_10053339
311 Ga0099794_10073221
312 Ga0105240_10024936
313 Ga0105240_10053945
314 Ga0105245_10043281
315 Ga0114129_10092246
316 Ga0105248_10144910
317 Ga0105237_10152632
318 Ga0105237_10177208
319 Ga0105238_10040110
320 Ga0105238_10064708
321 Ga0105239_10011207
322 Ga0157373_10010325
323 Ga0157370_10021309
324 Ga0157370_10258362
325 Ga0157369_10001413
326 Ga0157369_10059356
327 Ga0157369_10086741
328 Ga0157369_10088645
329 Ga0157374_10175575
330 Ga0157378_10200545
331 Ga0163162_10005510
332 Ga0163162_10201115
333 Ga0157372_10073619
334 Ga0157376_10022697
335 Ga0197907_10371422
336 Ga0224712_10005861
337 Ga0207692_10016171
338 Ga0207647_10001316
339 Ga0207685_10011354
340 Ga0207685_10036044
341 Ga0207684_10001327
342 Ga0207684_10082883
343 Ga0207707_10080059
344 Ga0207707_10088550
345 Ga0207695_10161219
346 Ga0207693_10000016
347 Ga0207693_10021949
348 Ga0207693_10027551
349 Ga0207693_10037386
350 Ga0207693_10103690
351 Ga0207663_10004657
352 Ga0207663_10005023
353 Ga0207660_10072706
354 Ga0207652_10017903
355 Ga0207646_10001208
356 Ga0207646_10002157
357 Ga0207646_10017105
358 Ga0207687_10038821
359 Ga0207700_10000566
360 Ga0207700_10014721
361 Ga0207700_10050865
362 Ga0207700_10072156
363 Ga0207700_10076825
364 Ga0207664_10028190
365 Ga0207664_10038238
366 Ga0207664_10066542
367 Ga0207664_10150916
368 Ga0207664_10171615
369 Ga0207665_10000168
370 Ga0207665_10000310
371 Ga0207665_10005793
372 Ga0207665_10019658
373 Ga0207665_10083698
374 Ga0207665_10089606
375 Ga0207689_10000166
376 Ga0207667_10010002
377 Ga0207667_10121044
378 Ga0207667_10247018
379 Ga0207703_10012643
380 Ga0207639_10062782
381 Ga0207639_10116509
382 Ga0207702_10004275
383 Ga0209588_1003381
384 Ga0209588_1007545
385 Ga0265354_1001329
386 Ga0265354_1002737
387 Ga0265326_10012119
388 Ga0265322_10000066
389 Ga0265338_10035502
390 Ga0265770_1002332
391 Ga0265770_1003593
392 Ga0265760_10009402
393 Ga0265760_10035575
394 Ga0265316_10001431
395 Ga0373926_0005021
396 Ga0373934_0002069
397 Ga0373923_0005494
398 Ga0373936_0005345
399 Ga0373945_0008521
400 Ga0373954_0000237
401 Ga0373956_0025209
402 Ga0373943_0006695
403 Ga0373943_0033582
404 Ga0373946_0001870
405 Ga0373955_0003666
406 Ga0373924_0002168
407 Ga0373924_0003821
408 Ga0373935_0002518
409 Ga0373935_0025033
410 Ga0373935_0064972
411 Ga0373927_0000548
412 Ga0373927_0001701
413 Ga0373927_0006240
414 Ga0373927_0079014
415 Ga0373947_0006095
416 Ga0373947_0006330
417 Ga0373947_0006679
418 Ga0373947_0009593
419 Ga0373947_0017176
420 Ga0373937_0001760
421 Ga0373937_0115988
422 Ga0373937_0125266
423 Ga0373925_0000082
424 Ga0373925_0000125
425 Ga0373925_0014145
426 Ga0373925_0042165
427 Ga0373925_0153540
428 Ga0453683_0002077
429 Ga0453683_0019541
430 Ga0453683_0021231
431 Ga0466963_0022842
432 Ga0453684_0000104
433 Ga0466957_0000102
434 Ga0466959_0039873
435 Ga0451576_0015136
436 Ga0466958_0028836
437 Ga0466967_0039206
438 Ga0466967_0068360
439 Ga0495592_0045339
440 Ga0495603_0065120
441 Ga0495629_0004647
442 Ga0495653_0110834
443 Ga0495580_0000774
444 Ga0495580_0034921
445 Ga0495580_0035157
446 Ga0495580_0049540
447 Ga0495580_0062604
448 Ga0495582_0087588
449 Ga0495662_0024135
450 Ga0495608_0025872
451 Ga0495630_0008924
452 Ga0495665_0042907
453 Ga0495665_0049454
454 Ga0495623_0006552
455 Ga0495647_0030922
456 Ga0495658_0062614
457 Ga0495669_0049922
458 Ga0495613_0061825
459 Ga0495613_0104656
460 Ga0495581_0004330
461 Ga0495604_0000176
462 Ga0495604_0050717
463 Ga0495684_0003211
464 Ga0495602_0012630
465 Ga0496102_0152381
466 Ga0496105_0003486
467 Ga0496111_0032494
468 Ga0496112_0034755
469 Ga0496112_0061998
470 Ga0496113_0000270
471 Ga0496113_0192174
472 Ga0496115_0025206
473 nmdc:mga0n895_3198_c1
474 nmdc:mga0rr50_213617_c1
475 nmdc:mga08x19_10948_c1
476 nmdc:mga08x19_2467_c1
477 nmdc:mga08x19_52266_c1
478 nmdc:mga08x19_811_c1
479 Ga0495601_0017595
480 Ga0587066_000680
481 Ga0587073_0005136
482 Ga0587082_000610
483 Ga0587083_0000389
484 Ga0587089_002416
485 Ga0587094_002355
486 Ga0587106_000431
487 Ga0587115_000478
488 Ga0587128_000289
489 Ga0587067_005562
490 Ga0587075_000192

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21269

TreT_GT1

Trehalose synthase, N-terminal domain

130

272

0.96

PF00534

Glycos_transf_1

Glycosyl transferases group 1

302

473

0.92

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

313

459

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zjh-assembly1.cif.gz_AAA trehalose transferase from thermoproteus uzoniensis soaked with trehalose 0.9574 37 433
6zj4-assembly1.cif.gz_AAA apo-trehalose transferase (apo-tret) from thermoproteus uzoniensis 0.9534 37 433
6zjh-assembly1.cif.gz_AAA trehalose transferase from thermoproteus uzoniensis soaked with trehalose 0.9503 37 433
6zj7-assembly1.cif.gz_AAA trehalose transferase (tret) from thermoproteus uzoniensis soaked with mg 0.9476 37 433
6zj4-assembly1.cif.gz_AAA apo-trehalose transferase (apo-tret) from thermoproteus uzoniensis 0.9464 37 433
ID Description Score Start End Superfamily
af_Q9VZU8_216_412_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9373 249 430 3.40.50.2000
2xa1A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9248 36 218 3.40.50.2000
af_F4IBV4_205_380_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9205 249 414 3.40.50.2000
2xa1B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9156 221 415 3.40.50.2000
af_Q9H553_211_399_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9114 249 412 3.40.50.2000
ID Description Score Start End GO Terms
AF-X1QQT9-F1-model_v4 Trehalose synthase N-terminal domain-containing protein 0.9779 84 272 GO:0016757
AF-A0A7J3A9A7-F1-model_v4 Glycosyltransferase 0.9729 35 431 GO:0006006
GO:0016757
AF-A0A1E7ITQ0-F1-model_v4 Glycosyl transferase family 1 0.9711 37 400 GO:0006006
GO:0016757
AF-A0A522LZW3-F1-model_v4 Glycosyltransferase 0.971 63 435 GO:0006006
GO:0016757
AF-A0A7V2JRM3-F1-model_v4 Glycosyl transferase family 1 0.9704 33 206 GO:0016757

Map