F357476

General Info

Members Datasets Scaffolds Average Seq Length
245 183 490 327

Family's Representative Sequence

Representative Sequence 3300031090|Ga0265760_10009219|Ga0265760_100092192
Length 370
Sequence VHDESAGVPQAETAAVTESDQEAVARLNEAYRKITDELAKVIVGQRKVIEELLIGMFAGGHCLLQGVPGLAKTLMVRTLADSLNLSFNRIQFTPDLMPADITGTDVIQDDRVTGTREFRFLPGPIFANVVLADEINRTPPKTQAALLEAMQEHQVTASGKRHKLPDAFFVLATQNPIEQEGTYPLPEAQLDRFMFEILVDYPSEDEEFELVRKTTSDHTAQIDKILSAEEVAHLQQVVRRMPVADHVIRYAMQLTRLTRRQNADIPDFVRDYVSWGAGPRASQYLILGAKARAMLKGRAFVNTEDVREVAAPVLRHRIITNFNAEADGVSPDTIVGRLTELVPADSSKATRGGRLPEVFRSADAGEARRA

Samples

Sample ID Description Type Environment
1 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
88 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
89 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
90 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
93 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
94 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
96 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
97 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
98 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
99 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
108 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
109 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
110 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
111 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
112 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
113 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
116 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
117 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
118 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
119 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
120 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
121 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
122 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
123 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
124 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
127 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
128 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
129 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
130 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
131 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
132 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
133 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
134 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
135 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
136 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
139 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
140 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
141 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
142 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
143 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
144 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
145 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
146 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
147 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
148 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
149 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
154 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
155 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
158 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
159 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
160 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
168 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
169 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
170 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
171 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
172 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
173 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
174 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
175 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
176 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
177 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
180 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
181 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0.41
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.35
Rhizosphere 86.12
Stem 0
Stem Tuber 0
Unclassified 0.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265760_10009219 3300031090 Bacteria 2820
2 Ga0065712_10068795 3300005290 Bacteria 9006
3 Ga0070670_100249553 3300005331 Bacteria 1546
4 Ga0070680_100065009 3300005336 Bacteria 2989
5 Ga0070691_10013845 3300005341 Bacteria 3702
6 Ga0070674_100207734 3300005356 Bacteria 1516
7 Ga0070703_10000026 3300005406 Bacteria 71473
8 Ga0070705_100068507 3300005440 Bacteria 2136
9 Ga0070705_100190027 3300005440 Bacteria 1398
10 Ga0070705_100257749 3300005440 Bacteria 1228
11 Ga0070694_100064352 3300005444 Bacteria 2510
12 Ga0070708_100000120 3300005445 Bacteria 52583
13 Ga0070678_100045711 3300005456 Bacteria 3134
14 Ga0070678_100066479 3300005456 Bacteria 2680
15 Ga0070678_100329256 3300005456 Bacteria 1307
16 Ga0068867_100016271 3300005459 Bacteria 5282
17 Ga0068867_100017715 3300005459 Bacteria 5056
18 Ga0070685_10243580 3300005466 Bacteria 1188
19 Ga0070706_100001624 3300005467 Bacteria 23449
20 Ga0070706_100178813 3300005467 Bacteria 1981
21 Ga0070707_100143656 3300005468 Bacteria 2322
22 Ga0070698_100017093 3300005471 Bacteria 7646
23 Ga0070697_100250393 3300005536 Bacteria 1515
24 Ga0070672_100121965 3300005543 Bacteria 2134
25 Ga0070665_100000082 3300005548 Bacteria 184202
26 Ga0070704_100019354 3300005549 Bacteria 4373
27 Ga0070704_100024821 3300005549 Bacteria 3939
28 Ga0070702_100044925 3300005615 Bacteria 2496
29 Ga0070702_100105386 3300005615 Bacteria 1738
30 Ga0068859_100063474 3300005617 Bacteria 3724
31 Ga0068866_10011818 3300005718 Bacteria 3790
32 Ga0068851_10162386 3300005834 Bacteria 1228
33 Ga0068870_10144803 3300005840 Bacteria 1394
34 Ga0068863_100002268 3300005841 Bacteria 19105
35 Ga0068858_100009867 3300005842 Bacteria 9073
36 Ga0081539_10041393 3300005985 Bacteria 2693
37 Ga0081539_10100096 3300005985 Bacteria 1479
38 Ga0070715_10023825 3300006163 Bacteria 2403
39 Ga0070716_100005297 3300006173 Bacteria 6235
40 Ga0070712_100004268 3300006175 Bacteria 8796
41 Ga0070712_100073186 3300006175 Bacteria 2457
42 Ga0068871_100018498 3300006358 Bacteria 5296
43 Ga0075428_100038444 3300006844 Bacteria 5266
44 Ga0075430_100015411 3300006846 Bacteria 6507
45 Ga0075431_100010387 3300006847 Bacteria 9357
46 Ga0075433_10004834 3300006852 Bacteria 10529
47 Ga0075434_100221129 3300006871 Bacteria 1913
48 Ga0075429_100062712 3300006880 Bacteria 3239
49 Ga0068865_100280305 3300006881 Bacteria 1327
50 Ga0097620_100063472 3300006931 Bacteria 3724
51 Ga0105240_10428596 3300009093 Bacteria 1484
52 Ga0111539_10034359 3300009094 Bacteria 6148
53 Ga0105243_10011013 3300009148 Bacteria 6838
54 Ga0105243_10055337 3300009148 Bacteria 3152
55 Ga0105243_10156124 3300009148 Bacteria 1962
56 Ga0105242_10001608 3300009176 Bacteria 17792
57 Ga0105242_10003256 3300009176 Bacteria 12669
58 Ga0105242_10063298 3300009176 Bacteria 3046
59 Ga0105248_10040907 3300009177 Bacteria 5197
60 Ga0105237_10017133 3300009545 Bacteria 7515
61 Ga0105238_10000112 3300009551 Bacteria 89923
62 Ga0105238_10000116 3300009551 Bacteria 89283
63 Ga0105238_10170840 3300009551 Bacteria 2150
64 Ga0105239_10258458 3300010375 Bacteria 1957
65 Ga0105246_10050171 3300011119 Bacteria 2861
66 Ga0157374_10040187 3300013296 Bacteria 4306
67 Ga0157378_10011025 3300013297 Bacteria 7910
68 Ga0157378_10017467 3300013297 Bacteria 6297
69 Ga0157378_10038422 3300013297 Bacteria 4242
70 Ga0163162_10143359 3300013306 Bacteria 2503
71 Ga0163162_10194880 3300013306 Bacteria 2154
72 Ga0163163_10110597 3300014325 Bacteria 2776
73 Ga0163163_10292500 3300014325 Bacteria 1681
74 Ga0157377_10118914 3300014745 Bacteria 1599
75 Ga0157376_10690408 3300014969 Bacteria 1025
76 Ga0207656_10123302 3300025321 Bacteria 1208
77 Ga0207653_10000009 3300025885 Bacteria 197279
78 Ga0207642_10054700 3300025899 Bacteria 1822
79 Ga0207685_10001387 3300025905 Bacteria 5030
80 Ga0207645_10031064 3300025907 Bacteria 3439
81 Ga0207643_10169541 3300025908 Bacteria 1317
82 Ga0207684_10000058 3300025910 Bacteria 211166
83 Ga0207684_10265022 3300025910 Bacteria 1483
84 Ga0207695_10304188 3300025913 Bacteria 1485
85 Ga0207695_10362230 3300025913 Bacteria 1336
86 Ga0207671_10014632 3300025914 Bacteria 6190
87 Ga0207693_10000707 3300025915 Bacteria 30016
88 Ga0207660_10151102 3300025917 Bacteria 1784
89 Ga0207646_10009587 3300025922 Bacteria 9552
90 Ga0207694_10000531 3300025924 Bacteria 34519
91 Ga0207694_10003994 3300025924 Bacteria 11624
92 Ga0207687_10078026 3300025927 Bacteria 2384
93 Ga0207690_10059420 3300025932 Bacteria 2590
94 Ga0207686_10003782 3300025934 Bacteria 8123
95 Ga0207669_10057194 3300025937 Bacteria 2373
96 Ga0207669_10148499 3300025937 Bacteria 1638
97 Ga0207665_10011490 3300025939 Bacteria 5817
98 Ga0207711_10044284 3300025941 Bacteria 3798
99 Ga0207677_10003681 3300026023 Bacteria 8140
100 Ga0207703_10030767 3300026035 Bacteria 4242
101 Ga0207708_10030051 3300026075 Bacteria 4121
102 Ga0207641_10000924 3300026088 Bacteria 30312
103 Ga0207648_10000525 3300026089 Bacteria 42863
104 Ga0207648_10036309 3300026089 Bacteria 4341
105 Ga0207675_100027889 3300026118 Bacteria 5259
106 Ga0207675_100088781 3300026118 Bacteria 2904
107 Ga0207683_10026792 3300026121 Bacteria 4979
108 Ga0207683_10108292 3300026121 Bacteria 2486
109 Ga0207683_10301418 3300026121 Bacteria 1466
110 Ga0207428_10025372 3300027907 Bacteria 4961
111 Ga0207428_10081166 3300027907 Bacteria 2532
112 Ga0268266_10000027 3300028379 Bacteria 426852
113 Ga0268264_10247820 3300028381 Bacteria 1653
114 Ga0307511_10000533 3300030521 Bacteria 40707
115 Ga0265339_10005882 3300031249 Bacteria 8127
116 Ga0265314_10010044 3300031711 Bacteria 7934
117 Ga0307413_10054400 3300031824 Bacteria 2428
118 Ga0307407_10047476 3300031903 Bacteria 2437
119 Ga0307409_100396210 3300031995 Bacteria 1317
120 Ga0307411_10180810 3300032005 Bacteria 1600
121 Ga0373926_0000015 3300035083 Bacteria 29103
122 Ga0373944_0032337 3300035089 Bacteria 1579
123 Ga0373923_0021382 3300035111 Bacteria 2525
124 Ga0373936_0003885 3300035113 Bacteria 5630
125 Ga0373945_0000009 3300035116 Bacteria 42918
126 Ga0373943_0008141 3300035170 Bacteria 4703
127 Ga0373943_0116984 3300035170 Bacteria 1413
128 Ga0373946_0000046 3300035171 Bacteria 32382
129 Ga0373924_0033519 3300035410 Bacteria 2074
130 Ga0373935_0015673 3300035692 Bacteria 4583
131 Ga0373927_0004859 3300035695 Bacteria 9346
132 Ga0373947_0000352 3300035725 Bacteria 26025
133 Ga0373947_0123739 3300035725 Bacteria 1645
134 Ga0373925_0010647 3300037068 Bacteria 6670
135 Ga0395900_0005200 3300037418 Bacteria 13657
136 Ga0395905_0134008 3300037471 Bacteria 2330
137 Ga0395901_0164662 3300038443 Bacteria 2328
138 Ga0400484_09349 3300038725 Bacteria 7589
139 Ga0400490_31566 3300038726 Bacteria 14670
140 Ga0400485_00019 3300038735 Bacteria 5404
141 Ga0400485_19140 3300038735 Bacteria 107256
142 Ga0400486_02256 3300038742 Bacteria 123491
143 Ga0400486_14788 3300038742 Bacteria 6024
144 Ga0400486_20825 3300038742 Bacteria 28342
145 Ga0400486_24836 3300038742 Bacteria 1764
146 Ga0400483_011721 3300039062 Unclassified 3757
147 Ga0400483_048177 3300039062 Bacteria 1201
148 Ga0400483_074176 3300039062 Bacteria 15673
149 Ga0400483_142028 3300039062 Bacteria 5171
150 Ga0400483_172056 3300039062 Bacteria 35109
151 Ga0400483_241401 3300039062 Bacteria 9509
152 Ga0400487_52982 3300039110 Bacteria 2693
153 Ga0495603_0003311 3300046455 Bacteria 9588
154 Ga0495603_0017215 3300046455 Bacteria 4375
155 Ga0495603_0031391 3300046455 Bacteria 3198
156 Ga0495603_0117241 3300046455 Bacteria 1552
157 Ga0495603_0122017 3300046455 Bacteria 1518
158 Ga0495629_0000415 3300046459 Bacteria 35795
159 Ga0495641_0011004 3300046461 Bacteria 5189
160 Ga0495580_0027422 3300046472 Bacteria 4144
161 Ga0495582_0008195 3300046473 Bacteria 5768
162 Ga0495639_0000237 3300046475 Bacteria 27553
163 Ga0495639_0059411 3300046475 Bacteria 1750
164 Ga0495584_0037496 3300046491 Bacteria 2450
165 Ga0495585_0074317 3300046492 Bacteria 1850
166 Ga0495594_0094036 3300046499 Bacteria 1682
167 Ga0495594_0188791 3300046499 Bacteria 1174
168 Ga0495596_0023763 3300046500 Bacteria 2486
169 Ga0495607_0019315 3300046501 Bacteria 4331
170 Ga0495618_0028036 3300046514 Bacteria 3509
171 Ga0495630_0000320 3300046517 Bacteria 38423
172 Ga0495644_0025828 3300046523 Bacteria 2228
173 Ga0495663_0075412 3300046525 Bacteria 1079
174 Ga0495666_0000471 3300046526 Bacteria 17921
175 Ga0495665_0005992 3300046531 Bacteria 6553
176 Ga0495665_0098578 3300046531 Bacteria 1534
177 Ga0495640_0008494 3300046533 Bacteria 8050
178 Ga0495586_0009673 3300046535 Bacteria 5133
179 Ga0495598_0000947 3300046537 Bacteria 5603
180 Ga0495621_0003340 3300046539 Bacteria 4423
181 Ga0495667_0155955 3300046559 Bacteria 1469
182 Ga0495634_0068856 3300046642 Bacteria 2336
183 Ga0495611_0089079 3300046648 Bacteria 1425
184 Ga0495635_0122593 3300046663 Bacteria 1772
185 Ga0495661_0072483 3300046665 Bacteria 2009
186 Ga0495588_0000558 3300046674 Bacteria 17914
187 Ga0495588_0098498 3300046674 Bacteria 1535
188 Ga0495647_0000573 3300046681 Bacteria 10853
189 Ga0495658_0052538 3300046683 Bacteria 2312
190 Ga0495613_0000822 3300046689 Bacteria 24037
191 Ga0495624_0003512 3300046690 Bacteria 11623
192 Ga0495581_0049213 3300047315 Bacteria 2433
193 Ga0495581_0057371 3300047315 Bacteria 2247
194 Ga0495674_0000995 3300047319 Bacteria 27252
195 Ga0495676_0129537 3300047321 Bacteria 1824
196 Ga0495676_0192395 3300047321 Bacteria 1422
197 Ga0495680_0006428 3300047322 Bacteria 10922
198 Ga0495593_0008836 3300047673 Bacteria 5848
199 Ga0495614_0010142 3300048089 Bacteria 4158
200 Ga0496102_0042856 3300048905 Bacteria 4102
201 Ga0496102_0207983 3300048905 Bacteria 1845
202 Ga0496102_0512592 3300048905 Bacteria 1122
203 Ga0496104_0107486 3300048907 Bacteria 2673
204 Ga0496106_0002305 3300048909 Bacteria 14239
205 Ga0496106_0281501 3300048909 Bacteria 1332
206 Ga0496107_0063258 3300048910 Bacteria 2681
207 Ga0496107_0067520 3300048910 Bacteria 2594
208 Ga0496108_0008163 3300048911 Bacteria 8492
209 Ga0496108_0254172 3300048911 Bacteria 1529
210 Ga0496109_0098297 3300048912 Bacteria 2713
211 Ga0496109_0308968 3300048912 Bacteria 1491
212 Ga0496110_0399256 3300048913 Bacteria 1253
213 Ga0496111_0045813 3300048914 Bacteria 3147
214 Ga0496112_0047807 3300048915 Bacteria 4197
215 Ga0496113_0042979 3300048916 Bacteria 3342
216 Ga0496113_0248805 3300048916 Bacteria 1419
217 Ga0496114_0003081 3300048917 Bacteria 12777
218 Ga0501034_0001112 3300049571 Bacteria 37708
219 Ga0501034_0006737 3300049571 Bacteria 12298
220 Ga0501034_0043204 3300049571 Bacteria 4563
221 Ga0501040_0000016 3300049576 Bacteria 75260
222 Ga0501040_0124981 3300049576 Bacteria 1807
223 Ga0501041_0020366 3300049577 Bacteria 3966
224 Ga0501042_0000046 3300049578 Bacteria 41284
225 Ga0501042_0041983 3300049578 Bacteria 3254
226 Ga0501046_0019526 3300049580 Bacteria 5620
227 Ga0501047_0000045 3300049581 Bacteria 174068
228 Ga0501069_0231737 3300049585 Bacteria 1075
229 Ga0501070_0202315 3300049586 Bacteria 1631
230 Ga0501071_0011303 3300049587 Bacteria 6010
231 Ga0501072_0015169 3300049588 Bacteria 5908
232 Ga0501074_0431291 3300049590 Bacteria 935
233 Ga0501075_0029280 3300049591 Bacteria 4071
234 Ga0501077_0037797 3300049593 Bacteria 3074
235 Ga0501079_0160745 3300049741 Bacteria 1752
236 Ga0501080_0079622 3300049742 Bacteria 3046
237 Ga0501280_001468 3300049776 Bacteria 4358
238 nmdc:mga0qj67_8547_c1 3300050509 Bacteria 7600
239 nmdc:mga08y16_106407_c1 3300050511 Bacteria 2920
240 nmdc:mga08y16_92574_c1 3300050511 Bacteria 2123
241 nmdc:mga0n895_108962_c1 3300050512 Bacteria 2785
242 Ga0495619_0002777 3300053085 Bacteria 11421
243 Ga0501084_0143502 3300054114 Bacteria 2011
244 Ga0501082_0046730 3300060353 Bacteria 3731
245 Ga0530510_0043742 3300061734 Bacteria 3235
246 Ga0265760_10009219
247 Ga0065712_10068795
248 Ga0070670_100249553
249 Ga0070680_100065009
250 Ga0070691_10013845
251 Ga0070674_100207734
252 Ga0070703_10000026
253 Ga0070705_100068507
254 Ga0070705_100190027
255 Ga0070705_100257749
256 Ga0070694_100064352
257 Ga0070708_100000120
258 Ga0070678_100045711
259 Ga0070678_100066479
260 Ga0070678_100329256
261 Ga0068867_100016271
262 Ga0068867_100017715
263 Ga0070685_10243580
264 Ga0070706_100001624
265 Ga0070706_100178813
266 Ga0070707_100143656
267 Ga0070698_100017093
268 Ga0070697_100250393
269 Ga0070672_100121965
270 Ga0070665_100000082
271 Ga0070704_100019354
272 Ga0070704_100024821
273 Ga0070702_100044925
274 Ga0070702_100105386
275 Ga0068859_100063474
276 Ga0068866_10011818
277 Ga0068851_10162386
278 Ga0068870_10144803
279 Ga0068863_100002268
280 Ga0068858_100009867
281 Ga0081539_10041393
282 Ga0081539_10100096
283 Ga0070715_10023825
284 Ga0070716_100005297
285 Ga0070712_100004268
286 Ga0070712_100073186
287 Ga0068871_100018498
288 Ga0075428_100038444
289 Ga0075430_100015411
290 Ga0075431_100010387
291 Ga0075433_10004834
292 Ga0075434_100221129
293 Ga0075429_100062712
294 Ga0068865_100280305
295 Ga0097620_100063472
296 Ga0105240_10428596
297 Ga0111539_10034359
298 Ga0105243_10011013
299 Ga0105243_10055337
300 Ga0105243_10156124
301 Ga0105242_10001608
302 Ga0105242_10003256
303 Ga0105242_10063298
304 Ga0105248_10040907
305 Ga0105237_10017133
306 Ga0105238_10000112
307 Ga0105238_10000116
308 Ga0105238_10170840
309 Ga0105239_10258458
310 Ga0105246_10050171
311 Ga0157374_10040187
312 Ga0157378_10011025
313 Ga0157378_10017467
314 Ga0157378_10038422
315 Ga0163162_10143359
316 Ga0163162_10194880
317 Ga0163163_10110597
318 Ga0163163_10292500
319 Ga0157377_10118914
320 Ga0157376_10690408
321 Ga0207656_10123302
322 Ga0207653_10000009
323 Ga0207642_10054700
324 Ga0207685_10001387
325 Ga0207645_10031064
326 Ga0207643_10169541
327 Ga0207684_10000058
328 Ga0207684_10265022
329 Ga0207695_10304188
330 Ga0207695_10362230
331 Ga0207671_10014632
332 Ga0207693_10000707
333 Ga0207660_10151102
334 Ga0207646_10009587
335 Ga0207694_10000531
336 Ga0207694_10003994
337 Ga0207687_10078026
338 Ga0207690_10059420
339 Ga0207686_10003782
340 Ga0207669_10057194
341 Ga0207669_10148499
342 Ga0207665_10011490
343 Ga0207711_10044284
344 Ga0207677_10003681
345 Ga0207703_10030767
346 Ga0207708_10030051
347 Ga0207641_10000924
348 Ga0207648_10000525
349 Ga0207648_10036309
350 Ga0207675_100027889
351 Ga0207675_100088781
352 Ga0207683_10026792
353 Ga0207683_10108292
354 Ga0207683_10301418
355 Ga0207428_10025372
356 Ga0207428_10081166
357 Ga0268266_10000027
358 Ga0268264_10247820
359 Ga0307511_10000533
360 Ga0265339_10005882
361 Ga0265314_10010044
362 Ga0307413_10054400
363 Ga0307407_10047476
364 Ga0307409_100396210
365 Ga0307411_10180810
366 Ga0373926_0000015
367 Ga0373944_0032337
368 Ga0373923_0021382
369 Ga0373936_0003885
370 Ga0373945_0000009
371 Ga0373943_0008141
372 Ga0373943_0116984
373 Ga0373946_0000046
374 Ga0373924_0033519
375 Ga0373935_0015673
376 Ga0373927_0004859
377 Ga0373947_0000352
378 Ga0373947_0123739
379 Ga0373925_0010647
380 Ga0395900_0005200
381 Ga0395905_0134008
382 Ga0395901_0164662
383 Ga0400484_09349
384 Ga0400490_31566
385 Ga0400485_00019
386 Ga0400485_19140
387 Ga0400486_02256
388 Ga0400486_14788
389 Ga0400486_20825
390 Ga0400486_24836
391 Ga0400483_011721
392 Ga0400483_048177
393 Ga0400483_074176
394 Ga0400483_142028
395 Ga0400483_172056
396 Ga0400483_241401
397 Ga0400487_52982
398 Ga0495603_0003311
399 Ga0495603_0017215
400 Ga0495603_0031391
401 Ga0495603_0117241
402 Ga0495603_0122017
403 Ga0495629_0000415
404 Ga0495641_0011004
405 Ga0495580_0027422
406 Ga0495582_0008195
407 Ga0495639_0000237
408 Ga0495639_0059411
409 Ga0495584_0037496
410 Ga0495585_0074317
411 Ga0495594_0094036
412 Ga0495594_0188791
413 Ga0495596_0023763
414 Ga0495607_0019315
415 Ga0495618_0028036
416 Ga0495630_0000320
417 Ga0495644_0025828
418 Ga0495663_0075412
419 Ga0495666_0000471
420 Ga0495665_0005992
421 Ga0495665_0098578
422 Ga0495640_0008494
423 Ga0495586_0009673
424 Ga0495598_0000947
425 Ga0495621_0003340
426 Ga0495667_0155955
427 Ga0495634_0068856
428 Ga0495611_0089079
429 Ga0495635_0122593
430 Ga0495661_0072483
431 Ga0495588_0000558
432 Ga0495588_0098498
433 Ga0495647_0000573
434 Ga0495658_0052538
435 Ga0495613_0000822
436 Ga0495624_0003512
437 Ga0495581_0049213
438 Ga0495581_0057371
439 Ga0495674_0000995
440 Ga0495676_0129537
441 Ga0495676_0192395
442 Ga0495680_0006428
443 Ga0495593_0008836
444 Ga0495614_0010142
445 Ga0496102_0042856
446 Ga0496102_0207983
447 Ga0496102_0512592
448 Ga0496104_0107486
449 Ga0496106_0002305
450 Ga0496106_0281501
451 Ga0496107_0063258
452 Ga0496107_0067520
453 Ga0496108_0008163
454 Ga0496108_0254172
455 Ga0496109_0098297
456 Ga0496109_0308968
457 Ga0496110_0399256
458 Ga0496111_0045813
459 Ga0496112_0047807
460 Ga0496113_0042979
461 Ga0496113_0248805
462 Ga0496114_0003081
463 Ga0501034_0001112
464 Ga0501034_0006737
465 Ga0501034_0043204
466 Ga0501040_0000016
467 Ga0501040_0124981
468 Ga0501041_0020366
469 Ga0501042_0000046
470 Ga0501042_0041983
471 Ga0501046_0019526
472 Ga0501047_0000045
473 Ga0501069_0231737
474 Ga0501070_0202315
475 Ga0501071_0011303
476 Ga0501072_0015169
477 Ga0501074_0431291
478 Ga0501075_0029280
479 Ga0501077_0037797
480 Ga0501079_0160745
481 Ga0501080_0079622
482 Ga0501280_001468
483 nmdc:mga0qj67_8547_c1
484 nmdc:mga08y16_106407_c1
485 nmdc:mga08y16_92574_c1
486 nmdc:mga0n895_108962_c1
487 Ga0495619_0002777
488 Ga0501084_0143502
489 Ga0501082_0046730
490 Ga0530510_0043742

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07726

AAA_3

ATPase family associated with various cellular activities (AAA)

61

195

0.98

PF17863

AAA_lid_2

AAA lid domain

268

338

0.95

PF07728

AAA_5

AAA domain (dynein-related subfamily)

61

193

0.86

PF20030

bpMoxR

MoxR domain in the MoxR-vWA-beta-propeller ternary systems

27

236

0.81

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

62

201

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.9174 8 330
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.8884 8 330
4upb-assembly1.cif.gz_E electron cryo-microscopy of the complex formed between the hexameric atpase rava and the decameric inducible decarboxylase ldci 0.8326 10 328
6q7m-assembly1.cif.gz_Z spiral structure of e. coli rava in the rava-ldci cage-like complex 0.8206 10 326
4upb-assembly1.cif.gz_C electron cryo-microscopy of the complex formed between the hexameric atpase rava and the decameric inducible decarboxylase ldci 0.8192 10 326
ID Description Score Start End Superfamily
af_I6YGX9_248_354_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9639 222 328 1.10.8.80
af_Q79FN7_233_349_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.95 212 326 1.10.8.80
af_O53314_205_312_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9499 215 327 1.10.8.80
2r44A03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9424 215 326 1.10.8.80
af_Q79FN7_37_232_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9335 15 209 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A358PKD6-F1-model_v4 deleted 0.9857 18 137
AF-A0A4P5QI29-F1-model_v4 ATPase AAA 0.9849 3 331 GO:0005524
GO:0016887
AF-A0A3D1K636-F1-model_v4 AAA family ATPase 0.9844 1 329 GO:0005524
GO:0016887
AF-A0A356T6A5-F1-model_v4 AAA family ATPase 0.984 223 329
AF-A0A1Y1RJA2-F1-model_v4 AAA family ATPase 0.9823 2 329 GO:0005524
GO:0016887

Map