F357399

General Info

Members Datasets Scaffolds Average Seq Length
245 168 223 367

Family's Representative Sequence

Representative Sequence 3300020082|Ga0206353_11393793|Ga0206353_113937933
Length 404
Sequence MDTPAFLPTDTTMRPVSNETSGNPPARARDAVCAPSATDALDVTPIAAVRAHAYRIPTDAPEADGTFEWTSTTLVVVEIDAGGCTGLGYTYTDASAAALINETLAEALLHEHAAAVRALTARLWRRVRNIGRSGLCATAISALDFALWDLNAKLLGVPLVRLLGGVLRAHVPIYGSGGFTSYDDAQLRNQLAHWVDVDGCTAVKMKIGAQPERDPQRVKTAREAIGDAELFVDANGALTVNQALQCAARIADEGVAWFEEPVSSDDLAGLHLVREAAPSSMDIAAGEYAYTSDDFRRMLEAQAVDVLQADATRCGGVTGFMQAAQLCDAWHIPLSAHCAPALHRHLAAAAPRLRHIEWFHDHVRIESMLFDGAPRADRGAIAPDLSRPGCGLDFKRADAKPYAL

Samples

Sample ID Description Type Environment
1 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
2 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
3 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
4 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
5 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
6 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
7 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
8 2904564687 Burkholderia sp. 571 Isolate Unclassified
9 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
10 2928163908 Burkholderia sp. 567 Isolate Unclassified
11 2928536128 Burkholderia sola 565 Isolate Unclassified
12 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere
13 2990703756 Paraburkholderia graminis SLBN-33 Isolate Rhizosphere
14 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
15 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
16 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
17 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
18 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
19 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
20 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
21 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
37 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
52 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
70 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
71 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
75 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
83 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
84 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
85 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
89 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
101 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
104 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
108 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
111 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
116 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
123 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
124 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
127 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
128 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
129 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
130 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
131 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
132 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
135 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
140 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
141 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
146 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
152 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
153 3300059512 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 57R_AW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
154 3300059639 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
155 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
156 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
157 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
158 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
159 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
160 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
161 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
162 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
163 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
164 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
165 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
166 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere
167 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
168 8057132660 Paracoccus rhizosphaerae LMG 21293 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.35
Metatranscriptomes 3.67
Isolates 8.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.82
Nodule 2.86
Rhizoplane 6.94
Rhizosphere 81.22
Stem 0
Stem Tuber 0
Unclassified 8.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10026986 3300001989 Bacteria 2010
2 JGI24735J21928_10021843 3300002067 Bacteria 1951
3 JGI24738J21930_10004880 3300002075 Bacteria 3255
4 rootH1_10243873 3300003323 Bacteria 2237
5 Ga0055527_1004739 3300003760 Bacteria 1835
6 Ga0070658_10008812 3300005327 Bacteria 8109
7 Ga0070658_10011188 3300005327 Bacteria 7191
8 Ga0070658_10142287 3300005327 Bacteria 2004
9 Ga0070683_100002621 3300005329 Bacteria 14385
10 Ga0070680_100025404 3300005336 Bacteria 4735
11 Ga0070680_100027882 3300005336 Bacteria 4526
12 Ga0070660_100000029 3300005339 Bacteria 88220
13 Ga0070660_100022856 3300005339 Bacteria 4630
14 Ga0070659_100000006 3300005366 Bacteria 229954
15 Ga0070659_100002982 3300005366 Bacteria 12055
16 Ga0070659_100055386 3300005366 Bacteria 3125
17 Ga0070714_100017980 3300005435 Bacteria 5733
18 Ga0070713_100010074 3300005436 Bacteria 6815
19 Ga0070663_100014040 3300005455 Bacteria 5131
20 Ga0070662_100156880 3300005457 Bacteria 1777
21 Ga0070681_10010181 3300005458 Bacteria 9274
22 Ga0070679_100017930 3300005530 Bacteria 6859
23 Ga0070665_100006851 3300005548 Bacteria 11583
24 Ga0070704_100021536 3300005549 Bacteria 4182
25 Ga0068855_100005322 3300005563 Bacteria 15722
26 Ga0068855_100006418 3300005563 Bacteria 14316
27 Ga0068855_100021040 3300005563 Bacteria 7823
28 Ga0070664_100069020 3300005564 Bacteria 3023
29 Ga0068857_100104490 3300005577 Bacteria 2543
30 Ga0075434_100113141 3300006871 Bacteria 2726
31 Ga0099824_1006316 3300006942 Bacteria 16320
32 Ga0099822_1023264 3300006943 Bacteria 5725
33 Ga0105240_10006576 3300009093 Bacteria 17064
34 Ga0105240_10045670 3300009093 Bacteria 5556
35 Ga0105240_10067883 3300009093 Bacteria 4418
36 Ga0105241_10209562 3300009174 Bacteria 1632
37 Ga0105248_10007978 3300009177 Bacteria 11633
38 Ga0105248_10345182 3300009177 Bacteria 1676
39 Ga0105238_10052363 3300009551 Bacteria 4103
40 Ga0105238_10147148 3300009551 Bacteria 2332
41 Ga0105239_10003913 3300010375 Bacteria 18041
42 Ga0157373_10133303 3300013100 Bacteria 1747
43 Ga0157371_10026632 3300013102 Bacteria 4201
44 Ga0157371_10035314 3300013102 Bacteria 3582
45 Ga0157370_10000823 3300013104 Bacteria 39235
46 Ga0157370_10015137 3300013104 Bacteria 7856
47 Ga0157369_10000145 3300013105 Bacteria 100895
48 Ga0157369_10000293 3300013105 Bacteria 66670
49 Ga0157369_10041818 3300013105 Bacteria 5001
50 Ga0157374_10000541 3300013296 Bacteria 33755
51 Ga0157378_10000161 3300013297 Bacteria 63839
52 Ga0157372_10003496 3300013307 Bacteria 16931
53 Ga0157372_10308245 3300013307 Bacteria 1842
54 Ga0157376_10022197 3300014969 Bacteria 4943
55 Ga0182007_10001975 3300015262 Bacteria 10581
56 Ga0206353_11393793 3300020082 Bacteria 5873
57 Ga0224712_10000009 3300022467 Bacteria 28893
58 Ga0209672_100284 3300025228 Bacteria 36000
59 Ga0209759_1009560 3300025256 Bacteria 2922
60 Ga0207647_10014074 3300025904 Bacteria 5529
61 Ga0207705_10006161 3300025909 Bacteria 8919
62 Ga0207705_10237047 3300025909 Bacteria 1389
63 Ga0207707_10004566 3300025912 Bacteria 12169
64 Ga0207707_10095496 3300025912 Unclassified 2598
65 Ga0207695_10103213 3300025913 Bacteria 2843
66 Ga0207660_10022641 3300025917 Bacteria 4234
67 Ga0207660_10040866 3300025917 Bacteria 3248
68 Ga0207657_10000072 3300025919 Bacteria 93655
69 Ga0207657_10012617 3300025919 Bacteria 8329
70 Ga0207649_10022382 3300025920 Bacteria 3650
71 Ga0207700_10011858 3300025928 Bacteria 5584
72 Ga0207690_10000019 3300025932 Bacteria 235380
73 Ga0207690_10014907 3300025932 Bacteria 4705
74 Ga0207690_10120345 3300025932 Bacteria 1906
75 Ga0207661_10050784 3300025944 Bacteria 3306
76 Ga0207679_10023623 3300025945 Bacteria 4206
77 Ga0207679_10093050 3300025945 Bacteria 2337
78 Ga0207667_10005567 3300025949 Bacteria 15372
79 Ga0207667_10021214 3300025949 Bacteria 7201
80 Ga0207667_10027372 3300025949 Bacteria 6206
81 Ga0207667_10311561 3300025949 Bacteria 1608
82 Ga0207678_10000659 3300026067 Bacteria 31738
83 Ga0209589_1000002 3300027357 Bacteria 708598
84 Ga0209489_100002 3300027361 Bacteria 708609
85 Ga0209700_100002 3300027363 Bacteria 708598
86 Ga0268266_10001613 3300028379 Bacteria 26315
87 Ga0265338_10005058 3300028800 Bacteria 17399
88 Ga0373931_0060349 3300035691 Bacteria 2041
89 Ga0395899_0000005 3300037312 Bacteria 772966
90 Ga0395899_0001243 3300037312 Bacteria 22144
91 Ga0395899_0008797 3300037312 Bacteria 7768
92 Ga0395899_0009802 3300037312 Bacteria 7350
93 Ga0395900_0000003 3300037418 Bacteria 587648
94 Ga0395900_0000053 3300037418 Bacteria 221135
95 Ga0395900_0061700 3300037418 Bacteria 3854
96 Ga0395900_0186822 3300037418 Bacteria 2103
97 Ga0395898_0000003 3300037466 Bacteria 772986
98 Ga0395898_0001275 3300037466 Bacteria 37117
99 Ga0395898_0002738 3300037466 Bacteria 20333
100 Ga0395898_0020884 3300037466 Bacteria 6645
101 Ga0395898_0038158 3300037466 Bacteria 4763
102 Ga0395898_0067880 3300037466 Bacteria 3452
103 Ga0395898_0113896 3300037466 Bacteria 2591
104 Ga0395905_0000065 3300037471 Bacteria 184928
105 Ga0395905_0000683 3300037471 Bacteria 44990
106 Ga0395905_0083498 3300037471 Bacteria 2992
107 Ga0395905_0252422 3300037471 Bacteria 1648
108 Ga0436364_1323076 3300037853 Bacteria 8828
109 Ga0395901_0000004 3300038443 Bacteria 657361
110 Ga0395901_0000042 3300038443 Bacteria 201819
111 Ga0395901_0000207 3300038443 Bacteria 73896
112 Ga0395901_0012124 3300038443 Bacteria 8743
113 Ga0395901_0044734 3300038443 Bacteria 4591
114 Ga0436365_0072519 3300039437 Bacteria 5313
115 Ga0439463_017737 3300042016 Bacteria 1768
116 Ga0466969_0000815 3300044656 Bacteria 16942
117 Ga0466969_0009363 3300044656 Bacteria 5191
118 Ga0466969_0052145 3300044656 Bacteria 2010
119 Ga0466982_0073505 3300044672 Bacteria 2112
120 Ga0466965_0005635 3300044683 Bacteria 5653
121 Ga0466965_0015769 3300044683 Bacteria 3591
122 Ga0466966_0000029 3300044684 Bacteria 104527
123 Ga0466966_0011593 3300044684 Bacteria 5842
124 Ga0466966_0014062 3300044684 Bacteria 5298
125 Ga0466966_0120539 3300044684 Bacteria 1611
126 Ga0466961_0000257 3300044693 Bacteria 35752
127 Ga0466961_0000569 3300044693 Bacteria 23452
128 Ga0466961_0001540 3300044693 Bacteria 14254
129 Ga0466961_0011898 3300044693 Bacteria 5561
130 Ga0466961_0025317 3300044693 Bacteria 3816
131 Ga0466964_0008649 3300044706 Bacteria 3828
132 Ga0466964_0067177 3300044706 Bacteria 1506
133 Ga0466968_0010541 3300044735 Bacteria 3586
134 Ga0466968_0046519 3300044735 Bacteria 1843
135 Ga0466970_0006887 3300044765 Bacteria 5691
136 Ga0466957_0000393 3300044842 Bacteria 21347
137 Ga0466957_0003428 3300044842 Bacteria 8705
138 Ga0466957_0030518 3300044842 Bacteria 3218
139 Ga0466957_0040378 3300044842 Bacteria 2818
140 Ga0466957_0041665 3300044842 Bacteria 2777
141 Ga0466960_0001616 3300044901 Bacteria 8244
142 Ga0466959_0013602 3300045049 Bacteria 5901
143 Ga0466958_0000649 3300045836 Bacteria 14998
144 Ga0466958_0014152 3300045836 Bacteria 4553
145 Ga0466958_0025896 3300045836 Bacteria 3462
146 Ga0466958_0124971 3300045836 Bacteria 1612
147 Ga0466967_0226753 3300045976 Bacteria 1778
148 Ga0495592_0025499 3300046454 Bacteria 4487
149 Ga0495603_0008366 3300046455 Bacteria 6253
150 Ga0495629_0000646 3300046459 Bacteria 28146
151 Ga0495651_0019772 3300046462 Bacteria 5221
152 Ga0495653_0018831 3300046463 Bacteria 5601
153 Ga0495650_0000600 3300046471 Bacteria 49470
154 Ga0495650_0003208 3300046471 Bacteria 12163
155 Ga0495650_0027829 3300046471 Bacteria 2605
156 Ga0495664_0008434 3300046477 Bacteria 5750
157 Ga0495596_0011347 3300046500 Bacteria 3847
158 Ga0495607_0125255 3300046501 Bacteria 1344
159 Ga0495606_0035901 3300046507 Bacteria 3384
160 Ga0495608_0115323 3300046511 Bacteria 1725
161 Ga0495610_0000281 3300046512 Bacteria 53046
162 Ga0495618_0125535 3300046514 Bacteria 1643
163 Ga0495628_0230243 3300046516 Bacteria 1389
164 Ga0495648_0018064 3300046524 Bacteria 5014
165 Ga0495665_0023761 3300046531 Bacteria 3293
166 Ga0495640_0018190 3300046533 Bacteria 5221
167 Ga0495587_0033483 3300046536 Bacteria 3102
168 Ga0495634_0009117 3300046642 Bacteria 7331
169 Ga0495623_0004592 3300046679 Bacteria 9075
170 Ga0495623_0106136 3300046679 Bacteria 1706
171 Ga0495624_0018324 3300046690 Bacteria 4683
172 Ga0495600_0141239 3300046809 Bacteria 1562
173 Ga0495581_0092417 3300047315 Bacteria 1756
174 Ga0495604_0003488 3300047317 Bacteria 12538
175 Ga0495674_0003561 3300047319 Bacteria 15142
176 Ga0495680_0017425 3300047322 Bacteria 6135
177 Ga0495683_0050243 3300047323 Bacteria 2087
178 Ga0495675_0013922 3300047444 Bacteria 5087
179 Ga0495593_0080887 3300047673 Bacteria 1680
180 Ga0495602_0031498 3300048088 Bacteria 5013
181 Ga0495614_0006406 3300048089 Bacteria 5284
182 Ga0495614_0039024 3300048089 Bacteria 2038
183 Ga0495626_0022552 3300048091 Bacteria 3107
184 Ga0496101_0073735 3300048904 Bacteria 2508
185 Ga0496101_0196235 3300048904 Bacteria 1559
186 Ga0496104_0019243 3300048907 Bacteria 6243
187 Ga0496104_0259893 3300048907 Bacteria 1649
188 Ga0496105_0088563 3300048908 Bacteria 2557
189 Ga0496105_0145258 3300048908 Bacteria 1951
190 Ga0496106_0045291 3300048909 Bacteria 3304
191 Ga0496108_0018541 3300048911 Bacteria 5699
192 Ga0496109_0009535 3300048912 Bacteria 8274
193 Ga0496110_0003896 3300048913 Bacteria 11481
194 Ga0496111_0006591 3300048914 Bacteria 7552
195 Ga0496112_0026575 3300048915 Bacteria 5573
196 Ga0496113_0036823 3300048916 Bacteria 3587
197 Ga0496113_0038815 3300048916 Bacteria 3502
198 Ga0496114_0036949 3300048917 Bacteria 4038
199 Ga0496114_0267512 3300048917 Bacteria 1506
200 Ga0496116_0027698 3300048919 Bacteria 4119
201 Ga0496117_0027398 3300048920 Bacteria 4442
202 Ga0496117_0066474 3300048920 Bacteria 2445
203 Ga0496118_0013852 3300048921 Bacteria 7591
204 Ga0496121_0003301 3300048924 Bacteria 23163
205 Ga0496125_0011828 3300048928 Bacteria 8698
206 Ga0501047_0036899 3300049581 Bacteria 4724
207 Ga0501067_0001517 3300049583 Bacteria 12639
208 Ga0501068_0001810 3300049584 Bacteria 11358
209 Ga0501070_0113891 3300049586 Bacteria 2234
210 Ga0501071_0013691 3300049587 Bacteria 5533
211 Ga0501079_0126792 3300049741 Bacteria 1986
212 Ga0501083_0053161 3300049744 Bacteria 2719
213 Ga0590077_021438 3300059426 Bacteria 1376
214 Ga0587088_002229 3300059508 Bacteria 2169
215 Ga0587092_001067 3300059512 Bacteria 2542
216 Ga0587062_000220 3300059639 Bacteria 3479
217 Ga0587067_000661 3300059640 Bacteria 3208
218 Ga0587072_000084 3300059643 Bacteria 7145
219 Ga0587076_000197 3300059645 Bacteria 4183
220 Ga0587111_0000089 3300060346 Bacteria 5791
221 Ga0466962_0001857 3300061719 Bacteria 9929
222 Ga0466962_0002213 3300061719 Bacteria 9191
223 Ga0466962_0012250 3300061719 Bacteria 4122

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300002067 JGI24735J21928_10021843 JGI24735J21928_100218433 306
2 3300009177 Ga0105248_10007978 Ga0105248_100079784 309
3 3300009551 Ga0105238_10052363 Ga0105238_100523632 309
4 3300013102 Ga0157371_10026632 Ga0157371_100266322 309
5 3300013296 Ga0157374_10000541 Ga0157374_1000054110 309
6 3300013297 Ga0157378_10000161 Ga0157378_1000016140 309
7 3300013307 Ga0157372_10003496 Ga0157372_100034965 309
8 3300014969 Ga0157376_10022197 Ga0157376_100221972 309
9 3300035691 Ga0373931_0060349 Ga0373931_0060349_288_1220 309
10 3300025945 Ga0207679_10093050 Ga0207679_100930503 319
11 3300046679 Ga0495623_0106136 Ga0495623_0106136_660_1640 325
12 3300005563 Ga0068855_100021040 Ga0068855_1000210402 328
13 3300025949 Ga0207667_10027372 Ga0207667_100273722 328
14 3300037466 Ga0395898_0067880 Ga0395898_0067880_36_1028 329
15 3300009174 Ga0105241_10209562 Ga0105241_102095622 337
16 3300044656 Ga0466969_0052145 Ga0466969_0052145_562_1677 342
17 3300044683 Ga0466965_0015769 Ga0466965_0015769_397_1512 342
18 3300044684 Ga0466966_0014062 Ga0466966_0014062_1076_2191 342
19 3300044706 Ga0466964_0008649 Ga0466964_0008649_35_1150 342
20 3300044842 Ga0466957_0003428 Ga0466957_0003428_2408_3523 342
21 3300045836 Ga0466958_0025896 Ga0466958_0025896_2280_3395 342
22 3300061719 Ga0466962_0001857 Ga0466962_0001857_476_1591 342
23 3300045976 Ga0466967_0226753 Ga0466967_0226753_119_1222 347
24 3300059508 Ga0587088_002229 Ga0587088_002229_327_1430 348
25 3300059512 Ga0587092_001067 Ga0587092_001067_271_1374 348
26 3300059639 Ga0587062_000220 Ga0587062_000220_601_1704 348
27 3300059640 Ga0587067_000661 Ga0587067_000661_480_1583 348
28 3300059643 Ga0587072_000084 Ga0587072_000084_4197_5300 348
29 3300059645 Ga0587076_000197 Ga0587076_000197_1950_3053 348
30 3300060346 Ga0587111_0000089 Ga0587111_0000089_2843_3946 348
31 iso_pu_bacteria 8053945823 8053949256 349
32 3300005339 Ga0070660_100022856 Ga0070660_1000228562 354
33 3300005366 Ga0070659_100002982 Ga0070659_1000029823 354
34 3300005457 Ga0070662_100156880 Ga0070662_1001568802 354
35 3300005564 Ga0070664_100069020 Ga0070664_1000690202 354
36 3300025919 Ga0207657_10012617 Ga0207657_100126173 354
37 3300025920 Ga0207649_10022382 Ga0207649_100223822 354
38 3300025932 Ga0207690_10014907 Ga0207690_100149072 354
39 3300025945 Ga0207679_10023623 Ga0207679_100236232 354
40 3300049744 Ga0501083_0053161 Ga0501083_0053161_1267_2346 355
41 3300003323 rootH1_10243873 rootH1_102438732 357
42 3300042016 Ga0439463_017737 Ga0439463_017737_517_1596 357
43 3300049583 Ga0501067_0001517 Ga0501067_0001517_6595_7674 357
44 3300049584 Ga0501068_0001810 Ga0501068_0001810_5252_6331 357
45 3300049587 Ga0501071_0013691 Ga0501071_0013691_2512_3591 357
46 3300005327 Ga0070658_10011188 Ga0070658_100111884 360
47 3300009093 Ga0105240_10067883 Ga0105240_100678834 360
48 3300013104 Ga0157370_10000823 Ga0157370_1000082329 360
49 3300038443 Ga0395901_0000207 Ga0395901_0000207_26040_27182 360
50 iso_pu_bacteria 2816332253 2817262957 360
51 iso_pu_bacteria 2816332256 2817276417 360
52 iso_pu_bacteria 2816332286 2817453846 360
53 iso_pu_bacteria 2863421361 2863423110 360
54 iso_pu_bacteria 2904564687 2904566955 360
55 iso_pu_bacteria 2904571731 2904574101 360
56 iso_pu_bacteria 2928163908 2928166708 360
57 iso_pu_bacteria 2928536128 2928541213 360
58 iso_pu_bacteria 8020807995 8020808002 360
59 iso_pu_bacteria 8020938398 8020941341 360
60 iso_pu_bacteria 8020953355 8020956678 360
61 iso_pu_bacteria 8039098773 8039098992 360
62 iso_pu_bacteria 8040173305 8040174230 360
63 3300005549 Ga0070704_100021536 Ga0070704_1000215362 361
64 3300006871 Ga0075434_100113141 Ga0075434_1001131412 361
65 3300037312 Ga0395899_0008797 Ga0395899_0008797_5838_6980 361
66 3300037466 Ga0395898_0113896 Ga0395898_0113896_1385_2527 361
67 3300039437 Ga0436365_0072519 Ga0436365_0072519_1019_2107 361
68 3300044684 Ga0466966_0000029 Ga0466966_0000029_48618_49706 361
69 3300044693 Ga0466961_0000569 Ga0466961_0000569_9263_10351 361
70 3300044842 Ga0466957_0041665 Ga0466957_0041665_989_2077 361
71 3300061719 Ga0466962_0012250 Ga0466962_0012250_145_1233 361
72 3300005336 Ga0070680_100027882 Ga0070680_1000278822 362
73 3300005458 Ga0070681_10010181 Ga0070681_100101815 362
74 3300005530 Ga0070679_100017930 Ga0070679_1000179303 362
75 3300013104 Ga0157370_10015137 Ga0157370_100151375 362
76 3300013307 Ga0157372_10308245 Ga0157372_103082452 362
77 3300025912 Ga0207707_10004566 Ga0207707_1000456610 362
78 3300025917 Ga0207660_10022641 Ga0207660_100226412 362
79 3300037471 Ga0395905_0252422 Ga0395905_0252422_92_1183 362
80 iso_pu_bacteria 8057132660 8057136526 362
81 3300009551 Ga0105238_10147148 Ga0105238_101471482 363
82 3300028800 Ga0265338_10005058 Ga0265338_1000505811 363
83 3300044735 Ga0466968_0010541 Ga0466968_0010541_350_1441 363
84 3300005327 Ga0070658_10008812 Ga0070658_100088123 364
85 3300005339 Ga0070660_100000029 Ga0070660_10000002939 364
86 3300005366 Ga0070659_100000006 Ga0070659_10000000644 364
87 3300005455 Ga0070663_100014040 Ga0070663_1000140402 364
88 3300005563 Ga0068855_100006418 Ga0068855_10000641815 364
89 3300010375 Ga0105239_10003913 Ga0105239_1000391310 364
90 3300013100 Ga0157373_10133303 Ga0157373_101333031 364
91 3300015262 Ga0182007_10001975 Ga0182007_1000197513 364
92 3300025909 Ga0207705_10006161 Ga0207705_100061617 364
93 3300025919 Ga0207657_10000072 Ga0207657_1000007249 364
94 3300025932 Ga0207690_10000019 Ga0207690_10000019171 364
95 3300025949 Ga0207667_10005567 Ga0207667_1000556716 364
96 3300026067 Ga0207678_10000659 Ga0207678_1000065931 364
97 3300044672 Ga0466982_0073505 Ga0466982_0073505_641_1900 364
98 3300044693 Ga0466961_0000257 Ga0466961_0000257_11439_12539 364
99 3300044693 Ga0466961_0001540 Ga0466961_0001540_1687_2946 364
100 3300044842 Ga0466957_0000393 Ga0466957_0000393_16712_17812 364
101 3300044901 Ga0466960_0001616 Ga0466960_0001616_3456_4715 364
102 3300048904 Ga0496101_0196235 Ga0496101_0196235_390_1490 364
103 3300048916 Ga0496113_0036823 Ga0496113_0036823_645_1745 364
104 3300048919 Ga0496116_0027698 Ga0496116_0027698_330_1430 364
105 3300048920 Ga0496117_0027398 Ga0496117_0027398_711_1811 364
106 3300048921 Ga0496118_0013852 Ga0496118_0013852_1606_2706 364
107 3300048924 Ga0496121_0003301 Ga0496121_0003301_14221_15321 364
108 3300048928 Ga0496125_0011828 Ga0496125_0011828_4026_5126 364
109 iso_pu_bacteria 2728368998 2728750696 364
110 3300005329 Ga0070683_100002621 Ga0070683_1000026213 365
111 3300005336 Ga0070680_100025404 Ga0070680_1000254042 365
112 3300009177 Ga0105248_10345182 Ga0105248_103451822 365
113 3300025912 Ga0207707_10095496 Ga0207707_100954962 365
114 3300025917 Ga0207660_10040866 Ga0207660_100408662 365
115 3300025944 Ga0207661_10050784 Ga0207661_100507842 365
116 3300037312 Ga0395899_0001243 Ga0395899_0001243_9319_10422 365
117 3300037466 Ga0395898_0038158 Ga0395898_0038158_2553_3656 365
118 3300037471 Ga0395905_0000065 Ga0395905_0000065_17888_18991 365
119 3300037471 Ga0395905_0000683 Ga0395905_0000683_28977_30080 365
120 3300037471 Ga0395905_0083498 Ga0395905_0083498_1789_2892 365
121 3300037853 Ga0436364_1323076 Ga0436364_1323076_7657_8757 365
122 3300038443 Ga0395901_0044734 Ga0395901_0044734_2024_3127 365
123 3300044683 Ga0466965_0005635 Ga0466965_0005635_4086_5189 365
124 3300044735 Ga0466968_0046519 Ga0466968_0046519_649_1752 365
125 3300044765 Ga0466970_0006887 Ga0466970_0006887_4151_5254 365
126 3300046471 Ga0495650_0027829 Ga0495650_0027829_385_1497 365
127 3300048904 Ga0496101_0073735 Ga0496101_0073735_277_1389 365
128 3300048907 Ga0496104_0019243 Ga0496104_0019243_3213_4328 365
129 3300048907 Ga0496104_0259893 Ga0496104_0259893_369_1481 365
130 3300048908 Ga0496105_0088563 Ga0496105_0088563_37_1152 365
131 3300048908 Ga0496105_0145258 Ga0496105_0145258_798_1910 365
132 3300048909 Ga0496106_0045291 Ga0496106_0045291_100_1212 365
133 3300048911 Ga0496108_0018541 Ga0496108_0018541_2266_3378 365
134 3300048912 Ga0496109_0009535 Ga0496109_0009535_4087_5202 365
135 3300048913 Ga0496110_0003896 Ga0496110_0003896_5467_6582 365
136 3300048914 Ga0496111_0006591 Ga0496111_0006591_2384_3499 365
137 3300048915 Ga0496112_0026575 Ga0496112_0026575_2171_3286 365
138 3300048916 Ga0496113_0038815 Ga0496113_0038815_401_1516 365
139 3300005548 Ga0070665_100006851 Ga0070665_1000068512 367
140 3300009093 Ga0105240_10006576 Ga0105240_1000657615 367
141 3300013102 Ga0157371_10035314 Ga0157371_100353144 367
142 3300013105 Ga0157369_10000293 Ga0157369_100002939 367
143 3300025913 Ga0207695_10103213 Ga0207695_101032131 367
144 3300028379 Ga0268266_10001613 Ga0268266_1000161313 367
145 3300037466 Ga0395898_0001275 Ga0395898_0001275_31821_32960 367
146 3300038443 Ga0395901_0012124 Ga0395901_0012124_4893_6032 367
147 3300046455 Ga0495603_0008366 Ga0495603_0008366_2604_3707 367
148 3300046459 Ga0495629_0000646 Ga0495629_0000646_13743_14846 367
149 3300046471 Ga0495650_0003208 Ga0495650_0003208_2634_3737 367
150 3300046501 Ga0495607_0125255 Ga0495607_0125255_138_1241 367
151 3300046511 Ga0495608_0115323 Ga0495608_0115323_246_1349 367
152 3300047315 Ga0495581_0092417 Ga0495581_0092417_256_1359 367
153 3300048089 Ga0495614_0006406 Ga0495614_0006406_1387_2490 367
154 3300048917 Ga0496114_0036949 Ga0496114_0036949_2759_3862 367
155 3300048917 Ga0496114_0267512 Ga0496114_0267512_121_1224 367
156 3300049581 Ga0501047_0036899 Ga0501047_0036899_1371_2483 367
157 3300049586 Ga0501070_0113891 Ga0501070_0113891_926_2038 367
158 3300049741 Ga0501079_0126792 Ga0501079_0126792_115_1227 367
159 3300005435 Ga0070714_100017980 Ga0070714_1000179804 368
160 3300005436 Ga0070713_100010074 Ga0070713_1000100748 368
161 3300006942 Ga0099824_1006316 Ga0099824_10063165 368
162 3300006943 Ga0099822_1023264 Ga0099822_10232644 368
163 3300009093 Ga0105240_10045670 Ga0105240_100456704 368
164 3300025928 Ga0207700_10011858 Ga0207700_100118582 368
165 3300027357 Ga0209589_1000002 Ga0209589_1000002272 368
166 3300027361 Ga0209489_100002 Ga0209489_100002272 368
167 3300027363 Ga0209700_100002 Ga0209700_100002272 368
168 3300037312 Ga0395899_0000005 Ga0395899_0000005_358743_359885 368
169 3300037418 Ga0395900_0000003 Ga0395900_0000003_413082_414224 368
170 3300037466 Ga0395898_0000003 Ga0395898_0000003_358763_359905 368
171 3300046477 Ga0495664_0008434 Ga0495664_0008434_146_1252 368
172 3300046516 Ga0495628_0230243 Ga0495628_0230243_14_1120 368
173 iso_pu_bacteria 2515154123 2515689666 368
174 3300005577 Ga0068857_100104490 Ga0068857_1001044902 369
175 3300037418 Ga0395900_0186822 Ga0395900_0186822_910_2046 369
176 3300044656 Ga0466969_0009363 Ga0466969_0009363_3484_4641 369
177 3300044684 Ga0466966_0120539 Ga0466966_0120539_412_1569 369
178 3300044693 Ga0466961_0025317 Ga0466961_0025317_2265_3422 369
179 3300044706 Ga0466964_0067177 Ga0466964_0067177_113_1270 369
180 3300044842 Ga0466957_0040378 Ga0466957_0040378_774_1931 369
181 3300045836 Ga0466958_0124971 Ga0466958_0124971_338_1495 369
182 iso_pu_bacteria 2900634093 2900639860 369
183 iso_pu_bacteria 2945934425 2945940108 369
184 iso_pu_bacteria 2990703756 2990707230 369
185 iso_pu_bacteria 641736151 642424186 369
186 iso_pu_bacteria 642555113 642617430 369
187 3300003760 Ga0055527_1004739 Ga0055527_10047392 370
188 3300005366 Ga0070659_100055386 Ga0070659_1000553863 370
189 3300005563 Ga0068855_100005322 Ga0068855_10000532210 370
190 3300025228 Ga0209672_100284 Ga0209672_10028429 370
191 3300025932 Ga0207690_10120345 Ga0207690_101203452 370
192 3300025949 Ga0207667_10021214 Ga0207667_100212144 370
193 3300025949 Ga0207667_10311561 Ga0207667_103115611 370
194 3300037466 Ga0395898_0020884 Ga0395898_0020884_1265_2413 370
195 3300044842 Ga0466957_0030518 Ga0466957_0030518_1359_2528 370
196 3300045836 Ga0466958_0014152 Ga0466958_0014152_682_1851 370
197 3300061719 Ga0466962_0002213 Ga0466962_0002213_7718_8887 370
198 3300013105 Ga0157369_10000145 Ga0157369_1000014531 372
199 3300020082 Ga0206353_11393793 Ga0206353_113937933 372
200 3300022467 Ga0224712_10000009 Ga0224712_1000000924 372
201 3300037312 Ga0395899_0009802 Ga0395899_0009802_3374_4552 372
202 3300037418 Ga0395900_0000053 Ga0395900_0000053_161037_162212 372
203 3300037418 Ga0395900_0061700 Ga0395900_0061700_558_1733 372
204 3300037466 Ga0395898_0002738 Ga0395898_0002738_18553_19728 372
205 3300038443 Ga0395901_0000004 Ga0395901_0000004_84047_85219 372
206 3300038443 Ga0395901_0000042 Ga0395901_0000042_112286_113461 372
207 3300044656 Ga0466969_0000815 Ga0466969_0000815_7571_8749 372
208 3300044684 Ga0466966_0011593 Ga0466966_0011593_2628_3806 372
209 3300044693 Ga0466961_0011898 Ga0466961_0011898_2423_3601 372
210 3300045049 Ga0466959_0013602 Ga0466959_0013602_2037_3215 372
211 3300045836 Ga0466958_0000649 Ga0466958_0000649_7739_8917 372
212 3300059426 Ga0590077_021438 Ga0590077_021438_185_1306 372
213 3300001989 JGI24739J22299_10026986 JGI24739J22299_100269862 373
214 3300002075 JGI24738J21930_10004880 JGI24738J21930_100048802 373
215 3300005327 Ga0070658_10142287 Ga0070658_101422872 373
216 3300013105 Ga0157369_10041818 Ga0157369_100418185 373
217 3300025256 Ga0209759_1009560 Ga0209759_10095602 373
218 3300025904 Ga0207647_10014074 Ga0207647_100140743 373
219 3300025909 Ga0207705_10237047 Ga0207705_102370472 373
220 3300046454 Ga0495592_0025499 Ga0495592_0025499_2902_4023 373
221 3300046462 Ga0495651_0019772 Ga0495651_0019772_3698_4819 373
222 3300046463 Ga0495653_0018831 Ga0495653_0018831_4029_5150 373
223 3300046471 Ga0495650_0000600 Ga0495650_0000600_24994_26115 373
224 3300046500 Ga0495596_0011347 Ga0495596_0011347_882_2003 373
225 3300046507 Ga0495606_0035901 Ga0495606_0035901_831_1952 373
226 3300046512 Ga0495610_0000281 Ga0495610_0000281_15636_16757 373
227 3300046514 Ga0495618_0125535 Ga0495618_0125535_452_1573 373
228 3300046524 Ga0495648_0018064 Ga0495648_0018064_186_1307 373
229 3300046531 Ga0495665_0023761 Ga0495665_0023761_270_1391 373
230 3300046533 Ga0495640_0018190 Ga0495640_0018190_352_1473 373
231 3300046536 Ga0495587_0033483 Ga0495587_0033483_1190_2311 373
232 3300046642 Ga0495634_0009117 Ga0495634_0009117_5445_6566 373
233 3300046679 Ga0495623_0004592 Ga0495623_0004592_4422_5543 373
234 3300046690 Ga0495624_0018324 Ga0495624_0018324_2816_3937 373
235 3300046809 Ga0495600_0141239 Ga0495600_0141239_276_1397 373
236 3300047317 Ga0495604_0003488 Ga0495604_0003488_5443_6564 373
237 3300047319 Ga0495674_0003561 Ga0495674_0003561_13194_14315 373
238 3300047322 Ga0495680_0017425 Ga0495680_0017425_967_2088 373
239 3300047323 Ga0495683_0050243 Ga0495683_0050243_333_1454 373
240 3300047444 Ga0495675_0013922 Ga0495675_0013922_3089_4210 373
241 3300047673 Ga0495593_0080887 Ga0495593_0080887_243_1364 373
242 3300048088 Ga0495602_0031498 Ga0495602_0031498_452_1573 373
243 3300048089 Ga0495614_0039024 Ga0495614_0039024_390_1511 373
244 3300048091 Ga0495626_0022552 Ga0495626_0022552_634_1755 373
245 3300048920 Ga0496117_0066474 Ga0496117_0066474_1196_2317 373

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13378

MR_MLE_C

Enolase C-terminal domain-like

186

399

0.95

PF02746

MR_MLE_N

Mandelate racemase / muconate lactonizing enzyme, N-terminal domain

54

164

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cyj-assembly1.cif.gz_A crystal structure of a mandelate racemase/muconate lactonizing enzyme-like protein from rubrobacter xylanophilus 0.9812 14 372
3cyj-assembly1.cif.gz_A crystal structure of a mandelate racemase/muconate lactonizing enzyme-like protein from rubrobacter xylanophilus 0.9758 14 372
3ck5-assembly2.cif.gz_D crystal structure of a racemase from streptomyces coelicolor a3(2) with bound magnesium 0.9395 15 369
3ck5-assembly1.cif.gz_A crystal structure of a racemase from streptomyces coelicolor a3(2) with bound magnesium 0.9382 15 372
5xd8-assembly1.cif.gz_A crystal structure analysis of 3,6-anhydro-l-galactonate cycloisomerase 0.9346 11 373
ID Description Score Start End Superfamily
3cyjD01 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain 0.983 14 125 3.30.390.10
3cyjD02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.975 126 363 3.20.20.120
3cyjD02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9709 126 363 3.20.20.120
af_P77215_65_157_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9444 45 133 3.30.420.40
5xd9A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9388 126 362 3.20.20.120
ID Description Score Start End GO Terms
AF-A0A4Y9QKV4-F1-model_v4 Mandelate racemase/muconate lactonizing enzyme C-terminal domain-containing protein 0.9934 170 372 GO:0000287
GO:0016052
GO:0016836
AF-A0A3C1CI87-F1-model_v4 Mandelate racemase 0.9892 117 330 GO:0000287
GO:0009063
GO:0016052
GO:0016836
AF-A0A538FGE1-F1-model_v4 Thiamine pyrophosphate-requiring protein 0.9887 27 372 GO:0000287
GO:0003824
GO:0009063
GO:0030976
AF-A0A6J4ZSG1-F1-model_v4 L-rhamnonate dehydratase (EC 4.2.1.90) 0.9882 233 373 GO:0000287
GO:0016052
GO:0050032
AF-A0A538B735-F1-model_v4 Mandelate racemase 0.9881 14 162 GO:0000287
GO:0016052
GO:0016836

Feature Viewer

pLDDT pTM Quality
95.83 0.93 High
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Predicted Structure (AlphaFold2)

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