F357230

General Info

Members Datasets Scaffolds Average Seq Length
245 151 490 249

Family's Representative Sequence

Representative Sequence 3300006173|Ga0070716_100135587|Ga0070716_1001355872
Length 292
Sequence MRIISSQEVAEKHKSTRDRSGDPGPEAREPSTNGGAPPGRRGQVRVERGAKRVRAYLGGVVVVDSIAPLLVWEVPYYPTYYFPEGDVRADLVADGGADLHSPSRGDGQTLSVLAGGCSALGAAARYEDSPIDELRGTVRFQWDPMEAWFEEDEQVYTHPRDPYTRVDILASSRRVRVLVDGLVLADSTSPRLLFETGLPTRHYLPRTHVRMDLLEGSPTVTHCPYKGRAETWSVRVGETLHEDLAWSYPAPLPESQKVAGLIAFYDEKLDIEVDGVLQERPSTKFGHSRRAA

Samples

Sample ID Description Type Environment
1 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
70 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
71 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
72 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
73 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
79 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
80 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
81 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
82 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
83 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
84 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
85 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
86 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
87 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
91 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
92 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
93 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
94 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
95 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
96 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
97 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
117 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
118 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
119 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
120 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
121 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
122 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
133 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
136 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
137 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
138 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
141 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
142 2643221692 Nocardia sp. Root136 Isolate Unclassified
143 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
144 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
145 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
146 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
147 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
148 2891562705 Microbispora tritici MT50 Isolate Unclassified
149 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
150 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
151 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.51
Metatranscriptomes 0
Isolates 4.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.41
Nodule 0
Rhizoplane 4.9
Rhizosphere 89.39
Stem 0
Stem Tuber 0
Unclassified 3.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070716_100135587 3300006173 Bacteria 1563
2 rootH2_10013506 3300003320 Bacteria 4619
3 rootH1_10067815 3300003323 Bacteria 3245
4 JGI25407J50210_10010873 3300003373 Bacteria 2320
5 Ga0070683_100367130 3300005329 Bacteria 1371
6 Ga0068868_100253185 3300005338 Bacteria 1483
7 Ga0070661_100277184 3300005344 Bacteria 1300
8 Ga0070668_100001326 3300005347 Bacteria 17707
9 Ga0070709_10445487 3300005434 Bacteria 975
10 Ga0070714_100001745 3300005435 Bacteria 15847
11 Ga0070714_100159641 3300005435 Bacteria 2039
12 Ga0070714_100226816 3300005435 Bacteria 1719
13 Ga0070714_100264322 3300005435 Unclassified 1594
14 Ga0070714_100275283 3300005435 Bacteria 1562
15 Ga0070714_100374319 3300005435 Bacteria 1341
16 Ga0070713_100091443 3300005436 Bacteria 2618
17 Ga0070711_100005850 3300005439 Bacteria 7382
18 Ga0070700_100085175 3300005441 Bacteria 2050
19 Ga0070708_100028000 3300005445 Bacteria 4844
20 Ga0070708_100032968 3300005445 Bacteria 4497
21 Ga0070708_100546135 3300005445 Bacteria 1093
22 Ga0070663_100000266 3300005455 Bacteria 26287
23 Ga0068867_100285565 3300005459 Bacteria 1355
24 Ga0068867_100460385 3300005459 Bacteria 1086
25 Ga0070706_100026960 3300005467 Bacteria 5287
26 Ga0070707_100243055 3300005468 Bacteria 1752
27 Ga0070698_100031162 3300005471 Bacteria 5528
28 Ga0070684_100437869 3300005535 Bacteria 1207
29 Ga0070684_100492199 3300005535 Bacteria 1135
30 Ga0070697_100039469 3300005536 Bacteria 3817
31 Ga0070672_100308313 3300005543 Bacteria 1343
32 Ga0070665_100688449 3300005548 Bacteria 1035
33 Ga0070665_100922237 3300005548 Bacteria 886
34 Ga0070664_100072514 3300005564 Bacteria 2953
35 Ga0068857_100018846 3300005577 Bacteria 6056
36 Ga0068858_100172803 3300005842 Unclassified 2038
37 Ga0081455_10017778 3300005937 Bacteria 6801
38 Ga0081455_10112582 3300005937 Bacteria 2160
39 Ga0081538_10000096 3300005981 Bacteria 85350
40 Ga0081538_10024444 3300005981 Bacteria 4302
41 Ga0081538_10049530 3300005981 Bacteria 2547
42 Ga0081540_1002040 3300005983 Bacteria 16845
43 Ga0070717_10182808 3300006028 Bacteria 1828
44 Ga0070717_10294447 3300006028 Bacteria 1442
45 Ga0070716_100207915 3300006173 Bacteria 1306
46 Ga0070712_100021366 3300006175 Bacteria 4251
47 Ga0075428_100098207 3300006844 Bacteria 3193
48 Ga0075428_100214651 3300006844 Bacteria 2079
49 Ga0075428_100623801 3300006844 Bacteria 1151
50 Ga0075430_100320156 3300006846 Bacteria 1282
51 Ga0075431_100000884 3300006847 Bacteria 26373
52 Ga0075431_100236875 3300006847 Bacteria 1858
53 Ga0075433_10053778 3300006852 Bacteria 3511
54 Ga0075434_100366332 3300006871 Bacteria 1462
55 Ga0075429_100000316 3300006880 Bacteria 34586
56 Ga0099794_10060755 3300007265 Bacteria 1836
57 Ga0111539_10001873 3300009094 Bacteria 27932
58 Ga0105245_10245797 3300009098 Bacteria 1737
59 Ga0105245_10423898 3300009098 Bacteria 1334
60 Ga0105247_10034712 3300009101 Bacteria 3072
61 Ga0114129_10030929 3300009147 Bacteria 7571
62 Ga0114129_10896492 3300009147 Bacteria 1124
63 Ga0105241_10650711 3300009174 Bacteria 957
64 Ga0105242_10340678 3300009176 Bacteria 1382
65 Ga0105242_10679208 3300009176 Bacteria 1005
66 Ga0105248_10045637 3300009177 Bacteria 4913
67 Ga0157378_10001031 3300013297 Bacteria 25443
68 Ga0163162_10545330 3300013306 Bacteria 1288
69 Ga0163163_10003742 3300014325 Bacteria 12950
70 Ga0207684_10193152 3300025910 Bacteria 1756
71 Ga0207684_10200942 3300025910 Bacteria 1719
72 Ga0207693_10016573 3300025915 Bacteria 5886
73 Ga0207693_10080298 3300025915 Bacteria 2553
74 Ga0207663_10006973 3300025916 Bacteria 5826
75 Ga0207646_10138347 3300025922 Bacteria 2193
76 Ga0207687_10222978 3300025927 Bacteria 1485
77 Ga0207664_10259800 3300025929 Bacteria 1518
78 Ga0207664_10319748 3300025929 Bacteria 1369
79 Ga0207664_10334602 3300025929 Bacteria 1338
80 Ga0207690_10336357 3300025932 Bacteria 1190
81 Ga0207665_10061566 3300025939 Bacteria 2544
82 Ga0207665_10363443 3300025939 Bacteria 1095
83 Ga0207661_10050579 3300025944 Bacteria 3312
84 Ga0207668_10141023 3300025972 Bacteria 1853
85 Ga0207703_10420385 3300026035 Unclassified 1244
86 Ga0207708_10073119 3300026075 Bacteria 2627
87 Ga0207641_10050310 3300026088 Bacteria 3525
88 Ga0207648_10129970 3300026089 Bacteria 2217
89 Ga0207674_10025965 3300026116 Bacteria 6234
90 Ga0207698_10329070 3300026142 Bacteria 1434
91 Ga0307515_10186700 3300028794 Bacteria 2000
92 Ga0265338_10002931 3300028800 Bacteria 24748
93 Ga0307410_10266184 3300031852 Bacteria 1339
94 Ga0307409_100130727 3300031995 Bacteria 2145
95 Ga0307409_100515223 3300031995 Bacteria 1167
96 Ga0307415_100000900 3300032126 Bacteria 13604
97 Ga0307507_10000880 3300033179 Bacteria 66789
98 Ga0307507_10012676 3300033179 Bacteria 10375
99 Ga0307510_10080995 3300033180 Bacteria 3152
100 Ga0373933_0020633 3300035724 Bacteria 3736
101 Ga0373937_0040465 3300036401 Bacteria 4248
102 Ga0395900_0034853 3300037418 Bacteria 5185
103 Ga0395900_0145909 3300037418 Bacteria 2420
104 Ga0395898_0013858 3300037466 Bacteria 8286
105 Ga0395898_0037417 3300037466 Bacteria 4814
106 Ga0395905_0031652 3300037471 Bacteria 4978
107 Ga0395901_0026867 3300038443 Bacteria 5910
108 Ga0395901_0036406 3300038443 Bacteria 5087
109 Ga0395901_0262319 3300038443 Bacteria 1798
110 Ga0436362_0069574 3300039453 Bacteria 965
111 Ga0450920_006180 3300042122 Bacteria 2147
112 Ga0450908_024803 3300042184 Bacteria 1048
113 Ga0466972_0022350 3300044658 Bacteria 3150
114 Ga0466965_0086943 3300044683 Bacteria 1586
115 Ga0466961_0022552 3300044693 Bacteria 4050
116 Ga0466961_0326269 3300044693 Bacteria 936
117 Ga0466968_0054249 3300044735 Bacteria 1718
118 Ga0466970_0222724 3300044765 Bacteria 1053
119 Ga0466960_0007520 3300044901 Bacteria 4430
120 Ga0466967_0041606 3300045976 Bacteria 3964
121 Ga0466967_0177624 3300045976 Bacteria 2006
122 Ga0466967_0204138 3300045976 Bacteria 1873
123 Ga0466967_0314776 3300045976 Bacteria 1508
124 Ga0495651_0022224 3300046462 Bacteria 4931
125 Ga0495628_0462832 3300046516 Bacteria 920
126 Ga0495667_0179663 3300046559 Bacteria 1358
127 Ga0495635_0086418 3300046663 Bacteria 2146
128 Ga0495588_0255758 3300046674 Bacteria 923
129 Ga0495657_0006628 3300046675 Bacteria 9045
130 Ga0495623_0025995 3300046679 Bacteria 3770
131 Ga0495680_0023965 3300047322 Bacteria 5069
132 Ga0495602_0055923 3300048088 Bacteria 3473
133 Ga0496103_0114767 3300048906 Bacteria 1713
134 Ga0496104_0182452 3300048907 Bacteria 2009
135 Ga0496105_0175985 3300048908 Bacteria 1753
136 Ga0496108_0268364 3300048911 Bacteria 1485
137 Ga0496109_0128385 3300048912 Bacteria 2365
138 Ga0496109_0330836 3300048912 Bacteria 1438
139 Ga0496110_0004742 3300048913 Bacteria 10585
140 Ga0496110_0056369 3300048913 Bacteria 3458
141 Ga0496111_0005093 3300048914 Bacteria 8362
142 Ga0496112_0103880 3300048915 Bacteria 2812
143 Ga0496112_0313144 3300048915 Bacteria 1515
144 Ga0496114_0112017 3300048917 Bacteria 2339
145 Ga0501031_0016097 3300049568 Bacteria 4856
146 Ga0501031_0068133 3300049568 Bacteria 2318
147 Ga0501031_0224793 3300049568 Unclassified 1222
148 Ga0501036_0001060 3300049572 Bacteria 20789
149 Ga0501036_0031678 3300049572 Bacteria 4469
150 Ga0501036_0090160 3300049572 Bacteria 2590
151 Ga0501038_0006797 3300049574 Bacteria 10566
152 Ga0501038_0039261 3300049574 Bacteria 4141
153 Ga0501038_0448835 3300049574 Bacteria 992
154 Ga0501039_0005979 3300049575 Bacteria 9221
155 Ga0501039_0009185 3300049575 Bacteria 7534
156 Ga0501039_0017215 3300049575 Bacteria 5544
157 Ga0501039_0124039 3300049575 Bacteria 2025
158 Ga0501040_0010370 3300049576 Bacteria 6089
159 Ga0501040_0046144 3300049576 Bacteria 2974
160 Ga0501040_0256146 3300049576 Bacteria 1249
161 Ga0501041_0022769 3300049577 Bacteria 3753
162 Ga0501041_0027373 3300049577 Bacteria 3435
163 Ga0501042_0000300 3300049578 Bacteria 24674
164 Ga0501042_0024669 3300049578 Bacteria 4219
165 Ga0501043_0001825 3300049579 Bacteria 18278
166 Ga0501043_0089894 3300049579 Unclassified 2414
167 Ga0501046_0000964 3300049580 Bacteria 28214
168 Ga0501046_0008524 3300049580 Bacteria 8929
169 Ga0501048_0004953 3300049582 Bacteria 10158
170 Ga0501048_0007366 3300049582 Bacteria 8337
171 Ga0501048_0170011 3300049582 Bacteria 1544
172 Ga0501068_0020368 3300049584 Bacteria 3863
173 Ga0501070_0563928 3300049586 Bacteria 911
174 Ga0501071_0001803 3300049587 Bacteria 12663
175 Ga0501071_0007391 3300049587 Bacteria 7208
176 Ga0501072_0000212 3300049588 Bacteria 42400
177 Ga0501072_0002374 3300049588 Bacteria 14125
178 Ga0501072_0070556 3300049588 Bacteria 2760
179 Ga0501072_0136663 3300049588 Bacteria 1954
180 Ga0501073_0129358 3300049589 Bacteria 1750
181 Ga0501074_0003482 3300049590 Bacteria 11168
182 Ga0501074_0074444 3300049590 Unclassified 2438
183 Ga0501075_0000367 3300049591 Bacteria 25872
184 Ga0501075_0006120 3300049591 Bacteria 8268
185 Ga0501075_0006714 3300049591 Bacteria 7939
186 Ga0501075_0152288 3300049591 Bacteria 1762
187 Ga0501075_0200059 3300049591 Unclassified 1524
188 Ga0501075_0338596 3300049591 Bacteria 1146
189 Ga0501076_0000230 3300049592 Bacteria 34050
190 Ga0501076_0015380 3300049592 Bacteria 5782
191 Ga0501076_0019790 3300049592 Bacteria 5149
192 Ga0501076_0092534 3300049592 Bacteria 2432
193 Ga0501077_0011328 3300049593 Bacteria 5568
194 Ga0501077_0020109 3300049593 Bacteria 4225
195 Ga0501077_0301692 3300049593 Bacteria 1020
196 Ga0501079_0000513 3300049741 Bacteria 25202
197 Ga0501079_0008265 3300049741 Bacteria 7890
198 Ga0501079_0023555 3300049741 Bacteria 4724
199 Ga0501079_0233752 3300049741 Bacteria 1436
200 Ga0501079_0429443 3300049741 Bacteria 1037
201 Ga0501080_0003733 3300049742 Bacteria 13443
202 Ga0501080_0060195 3300049742 Bacteria 3534
203 Ga0501080_0083426 3300049742 Bacteria 2969
204 Ga0501081_0020980 3300049743 Bacteria 4360
205 Ga0501081_0473743 3300049743 Bacteria 932
206 Ga0501081_0740383 3300049743 Bacteria 739
207 Ga0501083_0006647 3300049744 Bacteria 8203
208 Ga0501045_0000523 3300049824 Bacteria 23895
209 Ga0501045_0001020 3300049824 Bacteria 18405
210 nmdc:mga05p37_264588_c1 3300050507 Bacteria 2056
211 nmdc:mga09592_929_c1 3300050508 Bacteria 22999
212 nmdc:mga0qj67_152685_c1 3300050509 Bacteria 1873
213 nmdc:mga06r32_216_c1 3300050510 Bacteria 46547
214 nmdc:mga06r32_221680_c1 3300050510 Bacteria 1879
215 nmdc:mga06r32_507849_c1 3300050510 Bacteria 1182
216 nmdc:mga0n895_305613_c1 3300050512 Bacteria 1612
217 nmdc:mga0n895_976703_c1 3300050512 Unclassified 829
218 Ga0495595_0018194 3300053084 Bacteria 3034
219 Ga0500616_0003957 3300053153 Bacteria 10855
220 Ga0501084_0001553 3300054114 Bacteria 18240
221 Ga0501084_0004897 3300054114 Bacteria 10942
222 Ga0501084_0042437 3300054114 Bacteria 3805
223 Ga0501084_0188400 3300054114 Bacteria 1741
224 Ga0501084_0192130 3300054114 Bacteria 1722
225 Ga0590071_047447 3300059421 Bacteria 1039
226 Ga0501082_0007220 3300060353 Bacteria 9578
227 Ga0501082_0034814 3300060353 Bacteria 4340
228 Ga0501082_0075244 3300060353 Bacteria 2909
229 Ga0501082_0081016 3300060353 Bacteria 2801
230 Ga0530510_0001339 3300061734 Bacteria 16482
231 Ga0530510_0010203 3300061734 Bacteria 6582
232 Ga0530510_0021567 3300061734 Bacteria 4583
233 Ga0530510_0058985 3300061734 Unclassified 2775
234 Ga0530510_0402622 3300061734 Bacteria 1032
235 2552105356 2551306166 Bacteria 9731570
236 2644515698 2643221692 Bacteria 7282860
237 2676487499 2675903060 Bacteria 10051191
238 2856742872 2856741275 Bacteria 8096094
239 2863074042 2863067949 Bacteria 8541735
240 2891396722 2891395885 Bacteria 9251614
241 2891559276 2891554331 Bacteria 8812224
242 2891565256 2891562705 Bacteria 8039471
243 2919718002 2919713450 Bacteria 7431245
244 8003318634 8003314358 Bacteria 10575343
245 8055072176 8055066027 Bacteria 9479577
246 Ga0070716_100135587
247 rootH2_10013506
248 rootH1_10067815
249 JGI25407J50210_10010873
250 Ga0070683_100367130
251 Ga0068868_100253185
252 Ga0070661_100277184
253 Ga0070668_100001326
254 Ga0070709_10445487
255 Ga0070714_100001745
256 Ga0070714_100159641
257 Ga0070714_100226816
258 Ga0070714_100264322
259 Ga0070714_100275283
260 Ga0070714_100374319
261 Ga0070713_100091443
262 Ga0070711_100005850
263 Ga0070700_100085175
264 Ga0070708_100028000
265 Ga0070708_100032968
266 Ga0070708_100546135
267 Ga0070663_100000266
268 Ga0068867_100285565
269 Ga0068867_100460385
270 Ga0070706_100026960
271 Ga0070707_100243055
272 Ga0070698_100031162
273 Ga0070684_100437869
274 Ga0070684_100492199
275 Ga0070697_100039469
276 Ga0070672_100308313
277 Ga0070665_100688449
278 Ga0070665_100922237
279 Ga0070664_100072514
280 Ga0068857_100018846
281 Ga0068858_100172803
282 Ga0081455_10017778
283 Ga0081455_10112582
284 Ga0081538_10000096
285 Ga0081538_10024444
286 Ga0081538_10049530
287 Ga0081540_1002040
288 Ga0070717_10182808
289 Ga0070717_10294447
290 Ga0070716_100207915
291 Ga0070712_100021366
292 Ga0075428_100098207
293 Ga0075428_100214651
294 Ga0075428_100623801
295 Ga0075430_100320156
296 Ga0075431_100000884
297 Ga0075431_100236875
298 Ga0075433_10053778
299 Ga0075434_100366332
300 Ga0075429_100000316
301 Ga0099794_10060755
302 Ga0111539_10001873
303 Ga0105245_10245797
304 Ga0105245_10423898
305 Ga0105247_10034712
306 Ga0114129_10030929
307 Ga0114129_10896492
308 Ga0105241_10650711
309 Ga0105242_10340678
310 Ga0105242_10679208
311 Ga0105248_10045637
312 Ga0157378_10001031
313 Ga0163162_10545330
314 Ga0163163_10003742
315 Ga0207684_10193152
316 Ga0207684_10200942
317 Ga0207693_10016573
318 Ga0207693_10080298
319 Ga0207663_10006973
320 Ga0207646_10138347
321 Ga0207687_10222978
322 Ga0207664_10259800
323 Ga0207664_10319748
324 Ga0207664_10334602
325 Ga0207690_10336357
326 Ga0207665_10061566
327 Ga0207665_10363443
328 Ga0207661_10050579
329 Ga0207668_10141023
330 Ga0207703_10420385
331 Ga0207708_10073119
332 Ga0207641_10050310
333 Ga0207648_10129970
334 Ga0207674_10025965
335 Ga0207698_10329070
336 Ga0307515_10186700
337 Ga0265338_10002931
338 Ga0307410_10266184
339 Ga0307409_100130727
340 Ga0307409_100515223
341 Ga0307415_100000900
342 Ga0307507_10000880
343 Ga0307507_10012676
344 Ga0307510_10080995
345 Ga0373933_0020633
346 Ga0373937_0040465
347 Ga0395900_0034853
348 Ga0395900_0145909
349 Ga0395898_0013858
350 Ga0395898_0037417
351 Ga0395905_0031652
352 Ga0395901_0026867
353 Ga0395901_0036406
354 Ga0395901_0262319
355 Ga0436362_0069574
356 Ga0450920_006180
357 Ga0450908_024803
358 Ga0466972_0022350
359 Ga0466965_0086943
360 Ga0466961_0022552
361 Ga0466961_0326269
362 Ga0466968_0054249
363 Ga0466970_0222724
364 Ga0466960_0007520
365 Ga0466967_0041606
366 Ga0466967_0177624
367 Ga0466967_0204138
368 Ga0466967_0314776
369 Ga0495651_0022224
370 Ga0495628_0462832
371 Ga0495667_0179663
372 Ga0495635_0086418
373 Ga0495588_0255758
374 Ga0495657_0006628
375 Ga0495623_0025995
376 Ga0495680_0023965
377 Ga0495602_0055923
378 Ga0496103_0114767
379 Ga0496104_0182452
380 Ga0496105_0175985
381 Ga0496108_0268364
382 Ga0496109_0128385
383 Ga0496109_0330836
384 Ga0496110_0004742
385 Ga0496110_0056369
386 Ga0496111_0005093
387 Ga0496112_0103880
388 Ga0496112_0313144
389 Ga0496114_0112017
390 Ga0501031_0016097
391 Ga0501031_0068133
392 Ga0501031_0224793
393 Ga0501036_0001060
394 Ga0501036_0031678
395 Ga0501036_0090160
396 Ga0501038_0006797
397 Ga0501038_0039261
398 Ga0501038_0448835
399 Ga0501039_0005979
400 Ga0501039_0009185
401 Ga0501039_0017215
402 Ga0501039_0124039
403 Ga0501040_0010370
404 Ga0501040_0046144
405 Ga0501040_0256146
406 Ga0501041_0022769
407 Ga0501041_0027373
408 Ga0501042_0000300
409 Ga0501042_0024669
410 Ga0501043_0001825
411 Ga0501043_0089894
412 Ga0501046_0000964
413 Ga0501046_0008524
414 Ga0501048_0004953
415 Ga0501048_0007366
416 Ga0501048_0170011
417 Ga0501068_0020368
418 Ga0501070_0563928
419 Ga0501071_0001803
420 Ga0501071_0007391
421 Ga0501072_0000212
422 Ga0501072_0002374
423 Ga0501072_0070556
424 Ga0501072_0136663
425 Ga0501073_0129358
426 Ga0501074_0003482
427 Ga0501074_0074444
428 Ga0501075_0000367
429 Ga0501075_0006120
430 Ga0501075_0006714
431 Ga0501075_0152288
432 Ga0501075_0200059
433 Ga0501075_0338596
434 Ga0501076_0000230
435 Ga0501076_0015380
436 Ga0501076_0019790
437 Ga0501076_0092534
438 Ga0501077_0011328
439 Ga0501077_0020109
440 Ga0501077_0301692
441 Ga0501079_0000513
442 Ga0501079_0008265
443 Ga0501079_0023555
444 Ga0501079_0233752
445 Ga0501079_0429443
446 Ga0501080_0003733
447 Ga0501080_0060195
448 Ga0501080_0083426
449 Ga0501081_0020980
450 Ga0501081_0473743
451 Ga0501081_0740383
452 Ga0501083_0006647
453 Ga0501045_0000523
454 Ga0501045_0001020
455 nmdc:mga05p37_264588_c1
456 nmdc:mga09592_929_c1
457 nmdc:mga0qj67_152685_c1
458 nmdc:mga06r32_216_c1
459 nmdc:mga06r32_221680_c1
460 nmdc:mga06r32_507849_c1
461 nmdc:mga0n895_305613_c1
462 nmdc:mga0n895_976703_c1
463 Ga0495595_0018194
464 Ga0500616_0003957
465 Ga0501084_0001553
466 Ga0501084_0004897
467 Ga0501084_0042437
468 Ga0501084_0188400
469 Ga0501084_0192130
470 Ga0590071_047447
471 Ga0501082_0007220
472 Ga0501082_0034814
473 Ga0501082_0075244
474 Ga0501082_0081016
475 Ga0530510_0001339
476 Ga0530510_0010203
477 Ga0530510_0021567
478 Ga0530510_0058985
479 Ga0530510_0402622
480 2552105356
481 2644515698
482 2676487499
483 2856742872
484 2863074042
485 2891396722
486 2891559276
487 2891565256
488 2919718002
489 8003318634
490 8055072176

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04248

NTP_transf_9

Domain of unknown function (DUF427)

175

267

0.98

PF04248

NTP_transf_9

Domain of unknown function (DUF427)

53

143

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3djm-assembly5.cif.gz_E crystal structure of a protein of unknown function from duf427 family (rsph17029_0682) from rhodobacter sphaeroides 2.4.1 at 2.51 a resolution 0.9381 129 232
3djm-assembly5.cif.gz_E crystal structure of a protein of unknown function from duf427 family (rsph17029_0682) from rhodobacter sphaeroides 2.4.1 at 2.51 a resolution 0.8817 129 232
7sfz-assembly3.cif.gz_F crystal structure of mis18a-yippee domain 0.7335 138 232
7sfz-assembly2.cif.gz_D crystal structure of mis18a-yippee domain 0.7017 137 233
7sfz-assembly3.cif.gz_F crystal structure of mis18a-yippee domain 0.7014 138 232
ID Description Score Start End Superfamily
af_O53404_128_241_2.170.150.40 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.958 129 232 2.170.150.40
af_P96817_9_123_2.170.150.40 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.9376 129 232 2.170.150.40
3djmD00 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.9172 130 232 2.170.150.40
af_O53404_8_113_2.170.150.40 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.8899 8 106 2.170.150.40
af_O53404_128_241_2.170.150.40 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.8692 129 232 2.170.150.40
ID Description Score Start End GO Terms
AF-A0A7Z9Y1B6-F1-model_v4 DUF427 domain-containing protein 0.98 129 244
AF-A0A429QJ75-F1-model_v4 deleted 0.9762 133 233
AF-A0A1A2VMM9-F1-model_v4 deleted 0.9745 140 230
AF-A0A0K2REG1-F1-model_v4 DUF427 domain-containing protein 0.9722 131 246
AF-A0A525PQ10-F1-model_v4 DUF427 domain-containing protein 0.9696 154 224

Map