F356446

General Info

Members Datasets Scaffolds Average Seq Length
244 146 488 242

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10128971|Ga0111539_101289712
Length 263
Sequence LVLQVTGLTKRYGRLTALSDVSFVIRPGEVLGLIGPNGSGKTTLFECLGGVLPADSGRVLALRPGSEQGDGRVLDAHERSATMFYLPDGIAPWPTQTVRWALDFTVGFFGSDSNVAQAFRPANAAIAGLKPCATTEDIVRELDLEPLLDSPIGTLSKGQRKRALLAIGLLTPQPVLLADEPFDGLDLRQSRDVARTLRAHAATRRTLVLSIHQITDAARVCDRFVLLSGGRVRGEGTFDELSEVAAAHGAPAADLEEVFLALT

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
41 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
104 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
105 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
106 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
107 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
108 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
119 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
122 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
125 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
126 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
135 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
136 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
137 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
138 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
144 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
145 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
146 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.92
Nodule 0.41
Rhizoplane 1.64
Rhizosphere 92.62
Stem 0
Stem Tuber 0
Unclassified 6.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10128971 3300009094 Bacteria 2962
2 rootL2_10132604 3300003322 Bacteria 1223
3 Ga0070683_100000025 3300005329 Bacteria 173339
4 Ga0070690_100243213 3300005330 Bacteria 1270
5 Ga0068869_100069285 3300005334 Bacteria 2607
6 Ga0068868_100025293 3300005338 Bacteria 4514
7 Ga0070689_100067512 3300005340 Bacteria 2788
8 Ga0070689_100445106 3300005340 Bacteria 1101
9 Ga0070668_100070762 3300005347 Bacteria 2716
10 Ga0070669_100058578 3300005353 Bacteria 2827
11 Ga0070669_100347276 3300005353 Bacteria 1204
12 Ga0070675_100000035 3300005354 Bacteria 86571
13 Ga0070675_100107300 3300005354 Bacteria 2358
14 Ga0070675_100318407 3300005354 Bacteria 1374
15 Ga0070671_100012004 3300005355 Bacteria 6968
16 Ga0070673_100100436 3300005364 Bacteria 2382
17 Ga0070673_100101947 3300005364 Bacteria 2365
18 Ga0070688_100016692 3300005365 Bacteria 4202
19 Ga0070688_100082447 3300005365 Bacteria 2085
20 Ga0070688_100221764 3300005365 Bacteria 1333
21 Ga0070688_100301827 3300005365 Bacteria 1158
22 Ga0070713_100051739 3300005436 Bacteria 3398
23 Ga0070700_100216450 3300005441 Bacteria 1355
24 Ga0070708_100456006 3300005445 Bacteria 1206
25 Ga0070708_100584441 3300005445 Archaea 1053
26 Ga0070708_100721491 3300005445 Bacteria 938
27 Ga0070708_100729716 3300005445 Bacteria 932
28 Ga0070663_100226340 3300005455 Bacteria 1471
29 Ga0070678_100180475 3300005456 Bacteria 1727
30 Ga0070678_100227937 3300005456 Bacteria 1552
31 Ga0070662_100213789 3300005457 Bacteria 1536
32 Ga0070681_10307012 3300005458 Bacteria 1496
33 Ga0068867_100048810 3300005459 Unclassified 3115
34 Ga0070707_100039821 3300005468 Bacteria 4494
35 Ga0070698_100022268 3300005471 Bacteria 6630
36 Ga0070699_100210901 3300005518 Bacteria 1729
37 Ga0070684_100000081 3300005535 Bacteria 62318
38 Ga0070672_100268242 3300005543 Bacteria 1441
39 Ga0070665_100005258 3300005548 Bacteria 13380
40 Ga0068855_100137034 3300005563 Bacteria 2792
41 Ga0068855_100282893 3300005563 Bacteria 1841
42 Ga0068852_100642578 3300005616 Bacteria 1068
43 Ga0068859_100135415 3300005617 Bacteria 2536
44 Ga0068864_100505794 3300005618 Bacteria 1163
45 Ga0068861_100256729 3300005719 Unclassified 1494
46 Ga0068870_10167028 3300005840 Unclassified 1310
47 Ga0068863_100000654 3300005841 Bacteria 35100
48 Ga0068863_100247249 3300005841 Bacteria 1722
49 Ga0068863_100516287 3300005841 Bacteria 1178
50 Ga0068858_100096305 3300005842 Bacteria 2757
51 Ga0068858_100459361 3300005842 Bacteria 1228
52 Ga0068860_100389978 3300005843 Bacteria 1376
53 Ga0068860_100419904 3300005843 Unclassified 1326
54 Ga0068860_100653743 3300005843 Bacteria 1059
55 Ga0068862_100042896 3300005844 Bacteria 3855
56 Ga0081455_10166800 3300005937 Bacteria 1681
57 Ga0075365_10020207 3300006038 Bacteria 4124
58 Ga0075363_100325875 3300006048 Bacteria 894
59 Ga0075364_10017132 3300006051 Bacteria 4521
60 Ga0070716_100232655 3300006173 Bacteria 1245
61 Ga0075362_10088799 3300006177 Unclassified 1432
62 Ga0075366_10000836 3300006195 Bacteria 14794
63 Ga0097621_100157312 3300006237 Bacteria 1951
64 Ga0097621_100270807 3300006237 Bacteria 1492
65 Ga0068871_100507636 3300006358 Bacteria 1088
66 Ga0075428_100021695 3300006844 Bacteria 7109
67 Ga0075428_100063047 3300006844 Bacteria 4058
68 Ga0075428_100103233 3300006844 Unclassified 3109
69 Ga0075428_100194902 3300006844 Bacteria 2191
70 Ga0075428_100421620 3300006844 Bacteria 1430
71 Ga0075428_100762174 3300006844 Bacteria 1029
72 Ga0075428_100946436 3300006844 Bacteria 913
73 Ga0075433_10099437 3300006852 Unclassified 2575
74 Ga0075433_10112446 3300006852 Bacteria 2415
75 Ga0075433_10118181 3300006852 Bacteria 2353
76 Ga0075434_100002072 3300006871 Bacteria 17432
77 Ga0075434_100037852 3300006871 Bacteria 4776
78 Ga0075434_100096950 3300006871 Bacteria 2953
79 Ga0075434_100187392 3300006871 Bacteria 2089
80 Ga0075434_100783478 3300006871 Bacteria 970
81 Ga0075429_100028914 3300006880 Bacteria 4814
82 Ga0068865_100374503 3300006881 Bacteria 1160
83 Ga0075436_100190079 3300006914 Bacteria 1453
84 Ga0075436_100214691 3300006914 Bacteria 1364
85 Ga0097620_100135416 3300006931 Bacteria 2536
86 Ga0075435_100032221 3300007076 Bacteria 4137
87 Ga0075435_100098305 3300007076 Bacteria 2423
88 Ga0111539_10001106 3300009094 Bacteria 35560
89 Ga0111539_10038944 3300009094 Bacteria 5733
90 Ga0111539_10221329 3300009094 Bacteria 2204
91 Ga0111539_10237081 3300009094 Bacteria 2124
92 Ga0111539_10283490 3300009094 Bacteria 1928
93 Ga0111539_10332535 3300009094 Bacteria 1768
94 Ga0111539_10532809 3300009094 Bacteria 1368
95 Ga0114129_10010659 3300009147 Bacteria 13106
96 Ga0114129_10011555 3300009147 Bacteria 12573
97 Ga0114129_10025925 3300009147 Bacteria 8303
98 Ga0114129_10038577 3300009147 Bacteria 6737
99 Ga0114129_10176569 3300009147 Bacteria 2909
100 Ga0114129_10519100 3300009147 Bacteria 1553
101 Ga0114129_10714932 3300009147 Bacteria 1286
102 Ga0114129_10809815 3300009147 Bacteria 1194
103 Ga0114129_10899326 3300009147 Bacteria 1122
104 Ga0105243_10120184 3300009148 Bacteria 2214
105 Ga0105242_10076921 3300009176 Unclassified 2783
106 Ga0105248_10110934 3300009177 Bacteria 3093
107 Ga0105248_10235065 3300009177 Bacteria 2063
108 Ga0163162_10467946 3300013306 Bacteria 1392
109 Ga0163162_10863839 3300013306 Bacteria 1019
110 Ga0163162_10872917 3300013306 Bacteria 1014
111 Ga0157375_10390360 3300013308 Bacteria 1559
112 Ga0157375_11053757 3300013308 Bacteria 951
113 Ga0163163_10000009 3300014325 Bacteria 268331
114 Ga0157380_10000919 3300014326 Bacteria 18556
115 Ga0157380_10172286 3300014326 Bacteria 1892
116 Ga0157380_10178580 3300014326 Bacteria 1863
117 Ga0157379_10006385 3300014968 Bacteria 10155
118 Ga0157379_10415049 3300014968 Bacteria 1239
119 Ga0157376_10324503 3300014969 Bacteria 1465
120 Ga0157376_10888425 3300014969 Bacteria 909
121 Ga0207642_10031916 3300025899 Bacteria 2212
122 Ga0207680_10051562 3300025903 Bacteria 2461
123 Ga0207680_10387414 3300025903 Bacteria 986
124 Ga0207645_10032098 3300025907 Bacteria 3376
125 Ga0207643_10120587 3300025908 Bacteria 1553
126 Ga0207684_10338105 3300025910 Bacteria 1297
127 Ga0207707_10320848 3300025912 Bacteria 1338
128 Ga0207695_10705056 3300025913 Bacteria 890
129 Ga0207662_10007955 3300025918 Bacteria 5777
130 Ga0207646_10078777 3300025922 Bacteria 2946
131 Ga0207681_10190552 3300025923 Bacteria 1569
132 Ga0207659_10002714 3300025926 Bacteria 10552
133 Ga0207659_10252859 3300025926 Bacteria 1430
134 Ga0207706_10022700 3300025933 Bacteria 5632
135 Ga0207706_10271810 3300025933 Bacteria 1479
136 Ga0207686_10036139 3300025934 Unclassified 2971
137 Ga0207686_10060056 3300025934 Bacteria 2405
138 Ga0207709_10135140 3300025935 Bacteria 1687
139 Ga0207670_10346977 3300025936 Bacteria 1174
140 Ga0207691_10076623 3300025940 Bacteria 3014
141 Ga0207691_10233357 3300025940 Bacteria 1593
142 Ga0207711_10205523 3300025941 Bacteria 1798
143 Ga0207711_10263801 3300025941 Bacteria 1584
144 Ga0207689_10036670 3300025942 Bacteria 4070
145 Ga0207661_10000028 3300025944 Bacteria 173347
146 Ga0207651_10136546 3300025960 Bacteria 1887
147 Ga0207712_10163044 3300025961 Bacteria 1735
148 Ga0207703_10105230 3300026035 Bacteria 2398
149 Ga0207703_10136629 3300026035 Bacteria 2123
150 Ga0207678_10113936 3300026067 Bacteria 2307
151 Ga0207641_10000693 3300026088 Bacteria 36308
152 Ga0207641_10356482 3300026088 Bacteria 1395
153 Ga0207676_10163758 3300026095 Bacteria 1930
154 Ga0207675_100261698 3300026118 Bacteria 1677
155 Ga0207675_100310025 3300026118 Unclassified 1539
156 Ga0207683_10092057 3300026121 Bacteria 2701
157 Ga0207698_10689701 3300026142 Bacteria 1015
158 Ga0207428_10000633 3300027907 Bacteria 41339
159 Ga0207428_10179980 3300027907 Bacteria 1598
160 Ga0268266_10024028 3300028379 Bacteria 5186
161 Ga0268265_10025102 3300028380 Bacteria 4225
162 Ga0268265_10112028 3300028380 Bacteria 2230
163 Ga0268264_10213504 3300028381 Bacteria 1773
164 Ga0268264_10297324 3300028381 Bacteria 1518
165 Ga0307405_10264548 3300031731 Bacteria 1286
166 Ga0307410_10016157 3300031852 Bacteria 4444
167 Ga0307406_10152339 3300031901 Bacteria 1651
168 Ga0307412_10011908 3300031911 Bacteria 5051
169 Ga0307409_100046935 3300031995 Bacteria 3273
170 Ga0307409_100083095 3300031995 Bacteria 2595
171 Ga0307409_100243026 3300031995 Bacteria 1640
172 Ga0307416_100325209 3300032002 Bacteria 1542
173 Ga0307416_100649517 3300032002 Bacteria 1139
174 Ga0307414_10013582 3300032004 Bacteria 4853
175 Ga0373938_0079910 3300034957 Bacteria 795
176 Ga0373934_0012544 3300035086 Bacteria 3198
177 Ga0373939_0009803 3300035114 Bacteria 2382
178 Ga0373945_0058147 3300035116 Bacteria 1438
179 Ga0373955_0003108 3300035172 Bacteria 7266
180 Ga0373931_0455194 3300035691 Bacteria 819
181 Ga0373947_0030397 3300035725 Unclassified 3174
182 Ga0373937_0000669 3300036401 Bacteria 29860
183 Ga0373937_0053174 3300036401 Bacteria 3715
184 Ga0373937_0435031 3300036401 Unclassified 1245
185 Ga0373925_0080004 3300037068 Bacteria 2484
186 Ga0373925_0122637 3300037068 Bacteria 2019
187 Ga0395900_0608187 3300037418 Bacteria 1033
188 Ga0395905_0442707 3300037471 Bacteria 1197
189 Ga0451576_0140609 3300045051 Bacteria 2517
190 Ga0495603_0066563 3300046455 Bacteria 2122
191 Ga0495651_0468306 3300046462 Bacteria 811
192 Ga0495664_0192557 3300046477 Bacteria 1236
193 Ga0495628_0251250 3300046516 Bacteria 1320
194 Ga0495645_0000735 3300046543 Bacteria 22370
195 Ga0495656_0022910 3300046615 Unclassified 2452
196 Ga0495634_0386216 3300046642 Bacteria 834
197 Ga0495635_0215836 3300046663 Bacteria 1299
198 Ga0495599_0091501 3300046678 Bacteria 1898
199 Ga0495647_0158584 3300046681 Bacteria 974
200 Ga0495669_0156452 3300046684 Bacteria 1080
201 Ga0495600_0447218 3300046809 Unclassified 799
202 Ga0495684_0052726 3300047471 Bacteria 3104
203 Ga0496102_0684252 3300048905 Bacteria 949
204 Ga0496110_0121683 3300048913 Bacteria 2352
205 Ga0496110_0178842 3300048913 Bacteria 1926
206 Ga0496114_0355897 3300048917 Bacteria 1295
207 nmdc:mga03683_198699_c1 3300050489 Unclassified 920
208 nmdc:mga00v17_46160_c1 3300050491 Bacteria 2635
209 nmdc:mga0yw44_193236_c1 3300050492 Bacteria 1343
210 nmdc:mga0k408_9200_c1 3300050493 Bacteria 5320
211 nmdc:mga06z11_13767_c1 3300050494 Bacteria 3563
212 nmdc:mga04h51_145564_c1 3300050495 Bacteria 902
213 nmdc:mga07m45_138669_c1 3300050496 Bacteria 1408
214 nmdc:mga05p37_19437_c1 3300050507 Bacteria 8218
215 nmdc:mga05p37_421576_c1 3300050507 Bacteria 1553
216 nmdc:mga05p37_79105_c1 3300050507 Bacteria 4049
217 nmdc:mga05p37_85967_c1 3300050507 Bacteria 3876
218 nmdc:mga05p37_8605_c1 3300050507 Bacteria 12067
219 nmdc:mga05p37_9830_c1 3300050507 Bacteria 11354
220 nmdc:mga09592_346476_c1 3300050508 Bacteria 1286
221 nmdc:mga09592_61193_c1 3300050508 Bacteria 3184
222 nmdc:mga08y16_210483_c1 3300050511 Bacteria 2014
223 nmdc:mga08y16_321837_c1 3300050511 Bacteria 1592
224 nmdc:mga08y16_4466_c1 3300050511 Bacteria 14618
225 nmdc:mga08y16_562804_c1 3300050511 Bacteria 1153
226 nmdc:mga08y16_577749_c1 3300050511 Bacteria 1135
227 nmdc:mga08y16_5818_c1 3300050511 Bacteria 12921
228 nmdc:mga08y16_77938_c1 3300050511 Bacteria 3455
229 nmdc:mga0n895_151345_c1 3300050512 Bacteria 2351
230 nmdc:mga0n895_440015_c1 3300050512 Bacteria 1317
231 nmdc:mga0n895_68045_c1 3300050512 Bacteria 3528
232 nmdc:mga0n895_713286_c1 3300050512 Bacteria 998
233 nmdc:mga0n895_78291_c1 3300050512 Bacteria 3290
234 nmdc:mga0n895_937129_c1 3300050512 Bacteria 850
235 nmdc:mga0rr50_11313_c1 3300050513 Bacteria 5706
236 nmdc:mga0rr50_71302_c1 3300050513 Bacteria 2651
237 nmdc:mga0rr50_81434_c1 3300050513 Bacteria 2498
238 nmdc:mga08x19_319042_c1 3300050514 Bacteria 1081
239 nmdc:mga0a205_180238_c1 3300050515 Bacteria 2007
240 nmdc:mga0a205_264168_c1 3300050515 Bacteria 1599
241 nmdc:mga0a205_301286_c1 3300050515 Bacteria 1476
242 nmdc:mga0a205_30475_c1 3300050515 Bacteria 5165
243 nmdc:mga0a205_315998_c1 3300050515 Bacteria 1433
244 643599964 643348564 Bacteria 8839022
245 Ga0111539_10128971
246 rootL2_10132604
247 Ga0070683_100000025
248 Ga0070690_100243213
249 Ga0068869_100069285
250 Ga0068868_100025293
251 Ga0070689_100067512
252 Ga0070689_100445106
253 Ga0070668_100070762
254 Ga0070669_100058578
255 Ga0070669_100347276
256 Ga0070675_100000035
257 Ga0070675_100107300
258 Ga0070675_100318407
259 Ga0070671_100012004
260 Ga0070673_100100436
261 Ga0070673_100101947
262 Ga0070688_100016692
263 Ga0070688_100082447
264 Ga0070688_100221764
265 Ga0070688_100301827
266 Ga0070713_100051739
267 Ga0070700_100216450
268 Ga0070708_100456006
269 Ga0070708_100584441
270 Ga0070708_100721491
271 Ga0070708_100729716
272 Ga0070663_100226340
273 Ga0070678_100180475
274 Ga0070678_100227937
275 Ga0070662_100213789
276 Ga0070681_10307012
277 Ga0068867_100048810
278 Ga0070707_100039821
279 Ga0070698_100022268
280 Ga0070699_100210901
281 Ga0070684_100000081
282 Ga0070672_100268242
283 Ga0070665_100005258
284 Ga0068855_100137034
285 Ga0068855_100282893
286 Ga0068852_100642578
287 Ga0068859_100135415
288 Ga0068864_100505794
289 Ga0068861_100256729
290 Ga0068870_10167028
291 Ga0068863_100000654
292 Ga0068863_100247249
293 Ga0068863_100516287
294 Ga0068858_100096305
295 Ga0068858_100459361
296 Ga0068860_100389978
297 Ga0068860_100419904
298 Ga0068860_100653743
299 Ga0068862_100042896
300 Ga0081455_10166800
301 Ga0075365_10020207
302 Ga0075363_100325875
303 Ga0075364_10017132
304 Ga0070716_100232655
305 Ga0075362_10088799
306 Ga0075366_10000836
307 Ga0097621_100157312
308 Ga0097621_100270807
309 Ga0068871_100507636
310 Ga0075428_100021695
311 Ga0075428_100063047
312 Ga0075428_100103233
313 Ga0075428_100194902
314 Ga0075428_100421620
315 Ga0075428_100762174
316 Ga0075428_100946436
317 Ga0075433_10099437
318 Ga0075433_10112446
319 Ga0075433_10118181
320 Ga0075434_100002072
321 Ga0075434_100037852
322 Ga0075434_100096950
323 Ga0075434_100187392
324 Ga0075434_100783478
325 Ga0075429_100028914
326 Ga0068865_100374503
327 Ga0075436_100190079
328 Ga0075436_100214691
329 Ga0097620_100135416
330 Ga0075435_100032221
331 Ga0075435_100098305
332 Ga0111539_10001106
333 Ga0111539_10038944
334 Ga0111539_10221329
335 Ga0111539_10237081
336 Ga0111539_10283490
337 Ga0111539_10332535
338 Ga0111539_10532809
339 Ga0114129_10010659
340 Ga0114129_10011555
341 Ga0114129_10025925
342 Ga0114129_10038577
343 Ga0114129_10176569
344 Ga0114129_10519100
345 Ga0114129_10714932
346 Ga0114129_10809815
347 Ga0114129_10899326
348 Ga0105243_10120184
349 Ga0105242_10076921
350 Ga0105248_10110934
351 Ga0105248_10235065
352 Ga0163162_10467946
353 Ga0163162_10863839
354 Ga0163162_10872917
355 Ga0157375_10390360
356 Ga0157375_11053757
357 Ga0163163_10000009
358 Ga0157380_10000919
359 Ga0157380_10172286
360 Ga0157380_10178580
361 Ga0157379_10006385
362 Ga0157379_10415049
363 Ga0157376_10324503
364 Ga0157376_10888425
365 Ga0207642_10031916
366 Ga0207680_10051562
367 Ga0207680_10387414
368 Ga0207645_10032098
369 Ga0207643_10120587
370 Ga0207684_10338105
371 Ga0207707_10320848
372 Ga0207695_10705056
373 Ga0207662_10007955
374 Ga0207646_10078777
375 Ga0207681_10190552
376 Ga0207659_10002714
377 Ga0207659_10252859
378 Ga0207706_10022700
379 Ga0207706_10271810
380 Ga0207686_10036139
381 Ga0207686_10060056
382 Ga0207709_10135140
383 Ga0207670_10346977
384 Ga0207691_10076623
385 Ga0207691_10233357
386 Ga0207711_10205523
387 Ga0207711_10263801
388 Ga0207689_10036670
389 Ga0207661_10000028
390 Ga0207651_10136546
391 Ga0207712_10163044
392 Ga0207703_10105230
393 Ga0207703_10136629
394 Ga0207678_10113936
395 Ga0207641_10000693
396 Ga0207641_10356482
397 Ga0207676_10163758
398 Ga0207675_100261698
399 Ga0207675_100310025
400 Ga0207683_10092057
401 Ga0207698_10689701
402 Ga0207428_10000633
403 Ga0207428_10179980
404 Ga0268266_10024028
405 Ga0268265_10025102
406 Ga0268265_10112028
407 Ga0268264_10213504
408 Ga0268264_10297324
409 Ga0307405_10264548
410 Ga0307410_10016157
411 Ga0307406_10152339
412 Ga0307412_10011908
413 Ga0307409_100046935
414 Ga0307409_100083095
415 Ga0307409_100243026
416 Ga0307416_100325209
417 Ga0307416_100649517
418 Ga0307414_10013582
419 Ga0373938_0079910
420 Ga0373934_0012544
421 Ga0373939_0009803
422 Ga0373945_0058147
423 Ga0373955_0003108
424 Ga0373931_0455194
425 Ga0373947_0030397
426 Ga0373937_0000669
427 Ga0373937_0053174
428 Ga0373937_0435031
429 Ga0373925_0080004
430 Ga0373925_0122637
431 Ga0395900_0608187
432 Ga0395905_0442707
433 Ga0451576_0140609
434 Ga0495603_0066563
435 Ga0495651_0468306
436 Ga0495664_0192557
437 Ga0495628_0251250
438 Ga0495645_0000735
439 Ga0495656_0022910
440 Ga0495634_0386216
441 Ga0495635_0215836
442 Ga0495599_0091501
443 Ga0495647_0158584
444 Ga0495669_0156452
445 Ga0495600_0447218
446 Ga0495684_0052726
447 Ga0496102_0684252
448 Ga0496110_0121683
449 Ga0496110_0178842
450 Ga0496114_0355897
451 nmdc:mga03683_198699_c1
452 nmdc:mga00v17_46160_c1
453 nmdc:mga0yw44_193236_c1
454 nmdc:mga0k408_9200_c1
455 nmdc:mga06z11_13767_c1
456 nmdc:mga04h51_145564_c1
457 nmdc:mga07m45_138669_c1
458 nmdc:mga05p37_19437_c1
459 nmdc:mga05p37_421576_c1
460 nmdc:mga05p37_79105_c1
461 nmdc:mga05p37_85967_c1
462 nmdc:mga05p37_8605_c1
463 nmdc:mga05p37_9830_c1
464 nmdc:mga09592_346476_c1
465 nmdc:mga09592_61193_c1
466 nmdc:mga08y16_210483_c1
467 nmdc:mga08y16_321837_c1
468 nmdc:mga08y16_4466_c1
469 nmdc:mga08y16_562804_c1
470 nmdc:mga08y16_577749_c1
471 nmdc:mga08y16_5818_c1
472 nmdc:mga08y16_77938_c1
473 nmdc:mga0n895_151345_c1
474 nmdc:mga0n895_440015_c1
475 nmdc:mga0n895_68045_c1
476 nmdc:mga0n895_713286_c1
477 nmdc:mga0n895_78291_c1
478 nmdc:mga0n895_937129_c1
479 nmdc:mga0rr50_11313_c1
480 nmdc:mga0rr50_71302_c1
481 nmdc:mga0rr50_81434_c1
482 nmdc:mga08x19_319042_c1
483 nmdc:mga0a205_180238_c1
484 nmdc:mga0a205_264168_c1
485 nmdc:mga0a205_301286_c1
486 nmdc:mga0a205_30475_c1
487 nmdc:mga0a205_315998_c1
488 643599964

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

18

183

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ee6-assembly1.cif.gz_A cryo-em structure of human abca7 in pe/ch nanodiscs 0.9199 2 209
7e7q-assembly1.cif.gz_A cryo-em structure of human abca4 in atp-bound state 0.9168 2 209
8eop-assembly1.cif.gz_A cryo-em structure of nanodisc reconstituted human abca7 eq mutant in atp bound closed state 0.9151 2 209
7w02-assembly1.cif.gz_A cryo-em structure of atp-bound abca3 0.9127 2 209
7lkz-assembly1.cif.gz_A structure of atp-bound human abca4 0.912 2 209
ID Description Score Start End Superfamily
af_A1ZBS3_470_698_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9282 1 209 3.40.50.300
af_Q2FXB7_1_229_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9261 2 220 3.40.50.300
af_O53149_2_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9261 2 209 3.40.50.300
af_Q1RS86_1791_2054_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9225 2 209 3.40.50.300
af_Q9VVJ9_503_747_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9223 2 203 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A831RXD7-F1-model_v4 ABC transporter ATP-binding protein 0.9701 1 202 GO:0005524
GO:0016887
AF-A0A2W0ACS7-F1-model_v4 ABC transporter 0.9669 1 223 GO:0005524
GO:0016887
AF-A0A496U7W8-F1-model_v4 ABC transporter ATP-binding protein 0.965 2 223 GO:0005524
GO:0016887
AF-B8I9Y1-F1-model_v4 ABC transporter related 0.9636 1 223 GO:0005524
GO:0016887
AF-A0A2W0ACS7-F1-model_v4 ABC transporter 0.9627 1 223 GO:0005524
GO:0016887

Map