F356377

General Info

Members Datasets Scaffolds Average Seq Length
244 182 488 198

Family's Representative Sequence

Representative Sequence 3300006177|Ga0075362_10184873|Ga0075362_101848731
Length 213
Sequence MRTLLRLILIPIAIGAIVLAIASFFMKGKGFSTRDQPSRIETVVAMQFRKLAMPSDARERKSTVAASPEAIEAGLAHWADHCATCHANDGSGDTTIGRNLYPKAPDMRKAPTQDLTDGELFYIIENGVRLTGMPAWGTDPPTPEGDKLTWQLVHFIRRLPKLTPDEIARMEGLNPKSPDEWREAQAEQDFLEGRDKPADGKAKPDAAAPHKHE

Samples

Sample ID Description Type Environment
1 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
2 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
93 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
94 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
95 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
96 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
97 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
99 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
100 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
101 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
102 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
107 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
108 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
109 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
110 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
111 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
112 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
113 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
114 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
115 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
116 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
117 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
118 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
119 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
120 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
121 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
124 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
125 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
126 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
127 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
128 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
129 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
132 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
133 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
134 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
135 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
136 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
137 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
138 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
151 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
152 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
153 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
154 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
155 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
156 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
157 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
158 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
159 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
160 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
167 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
168 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
169 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
170 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
176 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
177 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
178 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
179 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
182 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0.41
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.38
Nodule 0
Rhizoplane 0
Rhizosphere 92.62
Stem 0
Stem Tuber 0
Unclassified 28.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075362_10184873 3300006177 Bacteria 1011
2 Ga0058862_11799277 3300004803 Viruses 1096
3 Ga0065712_10136319 3300005290 Bacteria 1490
4 Ga0070676_10286209 3300005328 Bacteria 1112
5 Ga0070690_100016397 3300005330 Bacteria 4437
6 Ga0070670_100006162 3300005331 Bacteria 10138
7 Ga0070670_100342255 3300005331 Bacteria 1313
8 Ga0070666_10002469 3300005335 Bacteria 11188
9 Ga0068868_100000896 3300005338 Bacteria 20265
10 Ga0070689_100426414 3300005340 Unclassified 1125
11 Ga0070689_100479734 3300005340 Bacteria 1062
12 Ga0070661_100023371 3300005344 Bacteria 4430
13 Ga0070675_100115951 3300005354 Bacteria 2271
14 Ga0070675_100834628 3300005354 Bacteria 843
15 Ga0070671_100037697 3300005355 Bacteria 4010
16 Ga0070667_100001998 3300005367 Bacteria 18070
17 Ga0070667_100796413 3300005367 Bacteria 877
18 Ga0070709_10363460 3300005434 Bacteria 1072
19 Ga0070713_100040975 3300005436 Bacteria 3770
20 Ga0070711_100900951 3300005439 Unclassified 755
21 Ga0070700_101021256 3300005441 Unclassified 681
22 Ga0070694_100002412 3300005444 Bacteria 11038
23 Ga0070678_101020117 3300005456 Unclassified 761
24 Ga0070662_100430111 3300005457 Unclassified 1093
25 Ga0070681_10427968 3300005458 Bacteria 1236
26 Ga0070685_10572181 3300005466 Bacteria 809
27 Ga0070707_100009814 3300005468 Bacteria 8905
28 Ga0070684_100120633 3300005535 Bacteria 2359
29 Ga0070672_100009567 3300005543 Bacteria 6687
30 Ga0070686_100007442 3300005544 Bacteria 6111
31 Ga0070695_100003276 3300005545 Bacteria 9456
32 Ga0070695_100796496 3300005545 Unclassified 757
33 Ga0070696_100076496 3300005546 Bacteria 2363
34 Ga0068855_101064120 3300005563 Unclassified 847
35 Ga0070664_100000443 3300005564 Bacteria 31206
36 Ga0068857_100049766 3300005577 Bacteria 3717
37 Ga0068856_100041865 3300005614 Bacteria 4504
38 Ga0068856_100051333 3300005614 Bacteria 4066
39 Ga0068859_100245037 3300005617 Bacteria 1882
40 Ga0068859_100271157 3300005617 Bacteria 1789
41 Ga0068859_100869229 3300005617 Unclassified 987
42 Ga0068864_100007915 3300005618 Bacteria 8756
43 Ga0068864_100287805 3300005618 Bacteria 1535
44 Ga0068863_100018811 3300005841 Bacteria 6610
45 Ga0068863_100037993 3300005841 Bacteria 4582
46 Ga0068863_100386847 3300005841 Bacteria 1366
47 Ga0068858_100059494 3300005842 Bacteria 3531
48 Ga0068858_100068785 3300005842 Unclassified 3282
49 Ga0070717_10459588 3300006028 Bacteria 1148
50 Ga0075368_10032783 3300006042 Bacteria 2019
51 Ga0075364_10027294 3300006051 Bacteria 3646
52 Ga0075364_10043548 3300006051 Bacteria 2919
53 Ga0075367_10038626 3300006178 Bacteria 2780
54 Ga0075367_10038849 3300006178 Bacteria 2773
55 Ga0075367_10043840 3300006178 Unclassified 2620
56 Ga0075367_10143371 3300006178 Bacteria 1480
57 Ga0075366_10101826 3300006195 Unclassified 1724
58 Ga0097621_100056930 3300006237 Bacteria 3195
59 Ga0075370_10015494 3300006353 Bacteria 4083
60 Ga0068871_100061604 3300006358 Bacteria 3065
61 Ga0068871_100244027 3300006358 Bacteria 1563
62 Ga0068871_100275951 3300006358 Unclassified 1469
63 Ga0075428_101284897 3300006844 Unclassified 770
64 Ga0075430_100002671 3300006846 Bacteria 14882
65 Ga0075431_100886097 3300006847 Bacteria 862
66 Ga0097620_100245028 3300006931 Bacteria 1882
67 Ga0097620_100271144 3300006931 Bacteria 1789
68 Ga0097620_100869158 3300006931 Unclassified 987
69 Ga0111539_10074645 3300009094 Unclassified 3995
70 Ga0111539_10556709 3300009094 Bacteria 1335
71 Ga0105245_10544748 3300009098 Bacteria 1182
72 Ga0114129_10075223 3300009147 Bacteria 4702
73 Ga0105241_10446447 3300009174 Unclassified 1143
74 Ga0105242_10162182 3300009176 Bacteria 1958
75 Ga0105248_10002642 3300009177 Bacteria 19913
76 Ga0105248_10155302 3300009177 Bacteria 2582
77 Ga0105237_10158166 3300009545 Unclassified 2263
78 Ga0105238_10048122 3300009551 Bacteria 4298
79 Ga0105239_10015726 3300010375 Bacteria 8375
80 Ga0105239_10020911 3300010375 Bacteria 7220
81 Ga0157374_11083822 3300013296 Bacteria 821
82 Ga0157378_11343541 3300013297 Unclassified 757
83 Ga0163162_10007129 3300013306 Bacteria 10849
84 Ga0163162_10017989 3300013306 Bacteria 6917
85 Ga0157372_10451328 3300013307 Bacteria 1498
86 Ga0157375_10002354 3300013308 Bacteria 16330
87 Ga0157375_10088737 3300013308 Bacteria 3147
88 Ga0157375_10123403 3300013308 Bacteria 2703
89 Ga0157375_10986665 3300013308 Bacteria 983
90 Ga0163163_10005688 3300014325 Bacteria 10807
91 Ga0163163_10020972 3300014325 Bacteria 6161
92 Ga0163163_10056044 3300014325 Bacteria 3896
93 Ga0157377_10036174 3300014745 Unclassified 2714
94 Ga0157379_10046377 3300014968 Unclassified 3877
95 Ga0157379_10166743 3300014968 Bacteria 1988
96 Ga0157376_10972150 3300014969 Unclassified 870
97 Ga0157376_11174576 3300014969 Unclassified 795
98 Ga0207682_10163304 3300025893 Bacteria 1010
99 Ga0207680_10190675 3300025903 Unclassified 1391
100 Ga0207707_10117017 3300025912 Unclassified 2330
101 Ga0207671_10123096 3300025914 Unclassified 1984
102 Ga0207649_10390427 3300025920 Unclassified 1039
103 Ga0207646_10011616 3300025922 Bacteria 8515
104 Ga0207694_10060831 3300025924 Unclassified 2939
105 Ga0207650_10004127 3300025925 Bacteria 9924
106 Ga0207659_10306147 3300025926 Unclassified 1307
107 Ga0207659_11019699 3300025926 Unclassified 712
108 Ga0207700_10039801 3300025928 Bacteria 3425
109 Ga0207644_10022063 3300025931 Bacteria 4345
110 Ga0207686_10587361 3300025934 Unclassified 875
111 Ga0207670_10108716 3300025936 Unclassified 1994
112 Ga0207670_10337598 3300025936 Bacteria 1190
113 Ga0207670_10487589 3300025936 Bacteria 999
114 Ga0207691_10015357 3300025940 Bacteria 7285
115 Ga0207711_10008983 3300025941 Bacteria 8353
116 Ga0207711_10115391 3300025941 Bacteria 2393
117 Ga0207679_10081295 3300025945 Unclassified 2477
118 Ga0207667_11110659 3300025949 Unclassified 774
119 Ga0207703_10028008 3300026035 Unclassified 4437
120 Ga0207703_10070291 3300026035 Bacteria 2889
121 Ga0207703_10235423 3300026035 Bacteria 1644
122 Ga0207708_10515656 3300026075 Bacteria 1004
123 Ga0207702_10158337 3300026078 Unclassified 2066
124 Ga0207641_10010749 3300026088 Bacteria 7505
125 Ga0207641_10367178 3300026088 Bacteria 1375
126 Ga0207676_10026168 3300026095 Bacteria 4337
127 Ga0207674_10064277 3300026116 Bacteria 3702
128 Ga0209813_10023012 3300027866 Bacteria 1769
129 Ga0307408_100707714 3300031548 Unclassified 906
130 Ga0307407_10472735 3300031903 Unclassified 914
131 Ga0307412_10291812 3300031911 Bacteria 1285
132 Ga0307409_100072573 3300031995 Unclassified 2742
133 Ga0307409_100480275 3300031995 Unclassified 1206
134 Ga0307411_10258570 3300032005 Bacteria 1374
135 Ga0373934_0200338 3300035086 Unclassified 822
136 Ga0373936_0404757 3300035113 Bacteria 627
137 Ga0373953_0095751 3300035117 Bacteria 1245
138 Ga0373954_0195566 3300035118 Unclassified 993
139 Ga0373957_0033374 3300035120 Unclassified 1901
140 Ga0373943_0237537 3300035170 Unclassified 1020
141 Ga0373955_0273229 3300035172 Unclassified 1016
142 Ga0373933_0112277 3300035724 Unclassified 1701
143 Ga0373937_0026106 3300036401 Bacteria 5278
144 Ga0373937_0456579 3300036401 Bacteria 1213
145 Ga0373937_0523415 3300036401 Bacteria 1127
146 Ga0373925_0068010 3300037068 Bacteria 2687
147 Ga0439453_0023034 3300041408 Bacteria 1134
148 Ga0495603_0235962 3300046455 Bacteria 1054
149 Ga0495629_0000150 3300046459 Bacteria 61183
150 Ga0495638_0038177 3300046460 Bacteria 3054
151 Ga0495582_0009061 3300046473 Bacteria 5491
152 Ga0495662_0125347 3300046476 Bacteria 1261
153 Ga0495664_0007759 3300046477 Bacteria 5973
154 Ga0495664_0032717 3300046477 Bacteria 3053
155 Ga0495594_0011245 3300046499 Bacteria 4649
156 Ga0495594_0085599 3300046499 Bacteria 1763
157 Ga0495608_0009517 3300046511 Bacteria 6789
158 Ga0495608_0084215 3300046511 Unclassified 2063
159 Ga0495620_0008251 3300046515 Bacteria 5601
160 Ga0495628_0198180 3300046516 Bacteria 1514
161 Ga0495652_0529471 3300046529 Unclassified 813
162 Ga0495640_0081143 3300046533 Unclassified 2156
163 Ga0495586_0117587 3300046535 Bacteria 1483
164 Ga0495587_0169494 3300046536 Unclassified 1241
165 Ga0495621_0129143 3300046539 Bacteria 982
166 Ga0495645_0053430 3300046543 Unclassified 2937
167 Ga0495667_0000366 3300046559 Bacteria 28526
168 Ga0495634_0526922 3300046642 Unclassified 691
169 Ga0495635_0001355 3300046663 Bacteria 16295
170 Ga0495635_0290453 3300046663 Bacteria 1097
171 Ga0495635_0424585 3300046663 Unclassified 881
172 Ga0495635_0429293 3300046663 Unclassified 875
173 Ga0495657_0002943 3300046675 Bacteria 14113
174 Ga0495657_0335071 3300046675 Bacteria 897
175 Ga0495646_0242140 3300046680 Bacteria 969
176 Ga0495647_0002155 3300046681 Bacteria 6153
177 Ga0495658_0000952 3300046683 Bacteria 15437
178 Ga0495613_0000675 3300046689 Bacteria 26989
179 Ga0495613_0021243 3300046689 Unclassified 4841
180 Ga0495613_0049165 3300046689 Bacteria 3113
181 Ga0495613_0203190 3300046689 Bacteria 1396
182 Ga0495670_0247561 3300046691 Bacteria 950
183 Ga0495581_0000190 3300047315 Bacteria 28570
184 Ga0495674_0009484 3300047319 Bacteria 9248
185 Ga0495674_0095323 3300047319 Unclassified 2537
186 Ga0495674_0166602 3300047319 Bacteria 1841
187 Ga0495676_0044856 3300047321 Bacteria 3604
188 Ga0495680_0002670 3300047322 Bacteria 18014
189 Ga0495675_0171953 3300047444 Bacteria 1330
190 Ga0495675_0321731 3300047444 Bacteria 915
191 Ga0495684_0079280 3300047471 Unclassified 2493
192 Ga0495684_0217993 3300047471 Bacteria 1400
193 Ga0495684_0266216 3300047471 Bacteria 1241
194 Ga0495614_0000885 3300048089 Bacteria 12702
195 Ga0501033_0408001 3300049570 Unclassified 947
196 Ga0501034_0222336 3300049571 Bacteria 1840
197 Ga0501036_0022599 3300049572 Bacteria 5291
198 Ga0501037_0284755 3300049573 Bacteria 1151
199 Ga0501038_0104874 3300049574 Bacteria 2349
200 Ga0501039_0059608 3300049575 Bacteria 2956
201 Ga0501041_0204138 3300049577 Archaea 1239
202 Ga0501042_0105438 3300049578 Bacteria 2029
203 Ga0501043_0053765 3300049579 Bacteria 3162
204 Ga0501046_0217443 3300049580 Bacteria 1416
205 Ga0501047_0162273 3300049581 Bacteria 2106
206 Ga0501067_0295693 3300049583 Unclassified 901
207 Ga0501068_0016181 3300049584 Bacteria 4297
208 Ga0501069_0402251 3300049585 Unclassified 810
209 Ga0501070_0725808 3300049586 Unclassified 784
210 Ga0501071_0028805 3300049587 Bacteria 3915
211 Ga0501071_0038244 3300049587 Bacteria 3428
212 Ga0501072_0127067 3300049588 Bacteria 2031
213 Ga0501073_0010301 3300049589 Bacteria 6864
214 Ga0501074_0049530 3300049590 Bacteria 3033
215 Ga0501075_0181008 3300049591 Bacteria 1608
216 Ga0501075_0315906 3300049591 Bacteria 1190
217 Ga0501076_0030276 3300049592 Bacteria 4215
218 Ga0501076_0112547 3300049592 Bacteria 2201
219 Ga0501076_0180504 3300049592 Unclassified 1721
220 Ga0501077_0065912 3300049593 Bacteria 2297
221 Ga0501079_0236154 3300049741 Bacteria 1428
222 Ga0501080_0081867 3300049742 Bacteria 2998
223 Ga0501080_0570353 3300049742 Bacteria 1007
224 Ga0501081_0265839 3300049743 Unclassified 1254
225 Ga0501083_0085268 3300049744 Bacteria 2090
226 Ga0501044_0468556 3300049823 Bacteria 1164
227 nmdc:mga00v17_1626_c1 3300050491 Bacteria 11752
228 nmdc:mga0k408_62208_c1 3300050493 Bacteria 2170
229 nmdc:mga06z11_16524_c1 3300050494 Bacteria 3326
230 nmdc:mga04h51_38928_c1 3300050495 Bacteria 1542
231 nmdc:mga09592_177453_c1 3300050508 Unclassified 1842
232 nmdc:mga0qj67_24280_c1 3300050509 Bacteria 4673
233 nmdc:mga06r32_46617_c1 3300050510 Unclassified 4136
234 nmdc:mga08y16_118853_c1 3300050511 Unclassified 2751
235 nmdc:mga0n895_133385_c1 3300050512 Unclassified 2510
236 nmdc:mga0n895_150035_c1 3300050512 Unclassified 2361
237 nmdc:mga0rr50_108443_c1 3300050513 Unclassified 2194
238 Ga0495619_0005549 3300053085 Bacteria 8003
239 Ga0500651_0191703 3300053093 Bacteria 1210
240 Ga0500641_0008965 3300053096 Bacteria 3585
241 Ga0500568_0001032 3300053139 Bacteria 19065
242 Ga0501084_0044275 3300054114 Bacteria 3726
243 Ga0501082_0027988 3300060353 Bacteria 4855
244 Ga0530510_0324128 3300061734 Unclassified 1155
245 Ga0075362_10184873
246 Ga0058862_11799277
247 Ga0065712_10136319
248 Ga0070676_10286209
249 Ga0070690_100016397
250 Ga0070670_100006162
251 Ga0070670_100342255
252 Ga0070666_10002469
253 Ga0068868_100000896
254 Ga0070689_100426414
255 Ga0070689_100479734
256 Ga0070661_100023371
257 Ga0070675_100115951
258 Ga0070675_100834628
259 Ga0070671_100037697
260 Ga0070667_100001998
261 Ga0070667_100796413
262 Ga0070709_10363460
263 Ga0070713_100040975
264 Ga0070711_100900951
265 Ga0070700_101021256
266 Ga0070694_100002412
267 Ga0070678_101020117
268 Ga0070662_100430111
269 Ga0070681_10427968
270 Ga0070685_10572181
271 Ga0070707_100009814
272 Ga0070684_100120633
273 Ga0070672_100009567
274 Ga0070686_100007442
275 Ga0070695_100003276
276 Ga0070695_100796496
277 Ga0070696_100076496
278 Ga0068855_101064120
279 Ga0070664_100000443
280 Ga0068857_100049766
281 Ga0068856_100041865
282 Ga0068856_100051333
283 Ga0068859_100245037
284 Ga0068859_100271157
285 Ga0068859_100869229
286 Ga0068864_100007915
287 Ga0068864_100287805
288 Ga0068863_100018811
289 Ga0068863_100037993
290 Ga0068863_100386847
291 Ga0068858_100059494
292 Ga0068858_100068785
293 Ga0070717_10459588
294 Ga0075368_10032783
295 Ga0075364_10027294
296 Ga0075364_10043548
297 Ga0075367_10038626
298 Ga0075367_10038849
299 Ga0075367_10043840
300 Ga0075367_10143371
301 Ga0075366_10101826
302 Ga0097621_100056930
303 Ga0075370_10015494
304 Ga0068871_100061604
305 Ga0068871_100244027
306 Ga0068871_100275951
307 Ga0075428_101284897
308 Ga0075430_100002671
309 Ga0075431_100886097
310 Ga0097620_100245028
311 Ga0097620_100271144
312 Ga0097620_100869158
313 Ga0111539_10074645
314 Ga0111539_10556709
315 Ga0105245_10544748
316 Ga0114129_10075223
317 Ga0105241_10446447
318 Ga0105242_10162182
319 Ga0105248_10002642
320 Ga0105248_10155302
321 Ga0105237_10158166
322 Ga0105238_10048122
323 Ga0105239_10015726
324 Ga0105239_10020911
325 Ga0157374_11083822
326 Ga0157378_11343541
327 Ga0163162_10007129
328 Ga0163162_10017989
329 Ga0157372_10451328
330 Ga0157375_10002354
331 Ga0157375_10088737
332 Ga0157375_10123403
333 Ga0157375_10986665
334 Ga0163163_10005688
335 Ga0163163_10020972
336 Ga0163163_10056044
337 Ga0157377_10036174
338 Ga0157379_10046377
339 Ga0157379_10166743
340 Ga0157376_10972150
341 Ga0157376_11174576
342 Ga0207682_10163304
343 Ga0207680_10190675
344 Ga0207707_10117017
345 Ga0207671_10123096
346 Ga0207649_10390427
347 Ga0207646_10011616
348 Ga0207694_10060831
349 Ga0207650_10004127
350 Ga0207659_10306147
351 Ga0207659_11019699
352 Ga0207700_10039801
353 Ga0207644_10022063
354 Ga0207686_10587361
355 Ga0207670_10108716
356 Ga0207670_10337598
357 Ga0207670_10487589
358 Ga0207691_10015357
359 Ga0207711_10008983
360 Ga0207711_10115391
361 Ga0207679_10081295
362 Ga0207667_11110659
363 Ga0207703_10028008
364 Ga0207703_10070291
365 Ga0207703_10235423
366 Ga0207708_10515656
367 Ga0207702_10158337
368 Ga0207641_10010749
369 Ga0207641_10367178
370 Ga0207676_10026168
371 Ga0207674_10064277
372 Ga0209813_10023012
373 Ga0307408_100707714
374 Ga0307407_10472735
375 Ga0307412_10291812
376 Ga0307409_100072573
377 Ga0307409_100480275
378 Ga0307411_10258570
379 Ga0373934_0200338
380 Ga0373936_0404757
381 Ga0373953_0095751
382 Ga0373954_0195566
383 Ga0373957_0033374
384 Ga0373943_0237537
385 Ga0373955_0273229
386 Ga0373933_0112277
387 Ga0373937_0026106
388 Ga0373937_0456579
389 Ga0373937_0523415
390 Ga0373925_0068010
391 Ga0439453_0023034
392 Ga0495603_0235962
393 Ga0495629_0000150
394 Ga0495638_0038177
395 Ga0495582_0009061
396 Ga0495662_0125347
397 Ga0495664_0007759
398 Ga0495664_0032717
399 Ga0495594_0011245
400 Ga0495594_0085599
401 Ga0495608_0009517
402 Ga0495608_0084215
403 Ga0495620_0008251
404 Ga0495628_0198180
405 Ga0495652_0529471
406 Ga0495640_0081143
407 Ga0495586_0117587
408 Ga0495587_0169494
409 Ga0495621_0129143
410 Ga0495645_0053430
411 Ga0495667_0000366
412 Ga0495634_0526922
413 Ga0495635_0001355
414 Ga0495635_0290453
415 Ga0495635_0424585
416 Ga0495635_0429293
417 Ga0495657_0002943
418 Ga0495657_0335071
419 Ga0495646_0242140
420 Ga0495647_0002155
421 Ga0495658_0000952
422 Ga0495613_0000675
423 Ga0495613_0021243
424 Ga0495613_0049165
425 Ga0495613_0203190
426 Ga0495670_0247561
427 Ga0495581_0000190
428 Ga0495674_0009484
429 Ga0495674_0095323
430 Ga0495674_0166602
431 Ga0495676_0044856
432 Ga0495680_0002670
433 Ga0495675_0171953
434 Ga0495675_0321731
435 Ga0495684_0079280
436 Ga0495684_0217993
437 Ga0495684_0266216
438 Ga0495614_0000885
439 Ga0501033_0408001
440 Ga0501034_0222336
441 Ga0501036_0022599
442 Ga0501037_0284755
443 Ga0501038_0104874
444 Ga0501039_0059608
445 Ga0501041_0204138
446 Ga0501042_0105438
447 Ga0501043_0053765
448 Ga0501046_0217443
449 Ga0501047_0162273
450 Ga0501067_0295693
451 Ga0501068_0016181
452 Ga0501069_0402251
453 Ga0501070_0725808
454 Ga0501071_0028805
455 Ga0501071_0038244
456 Ga0501072_0127067
457 Ga0501073_0010301
458 Ga0501074_0049530
459 Ga0501075_0181008
460 Ga0501075_0315906
461 Ga0501076_0030276
462 Ga0501076_0112547
463 Ga0501076_0180504
464 Ga0501077_0065912
465 Ga0501079_0236154
466 Ga0501080_0081867
467 Ga0501080_0570353
468 Ga0501081_0265839
469 Ga0501083_0085268
470 Ga0501044_0468556
471 nmdc:mga00v17_1626_c1
472 nmdc:mga0k408_62208_c1
473 nmdc:mga06z11_16524_c1
474 nmdc:mga04h51_38928_c1
475 nmdc:mga09592_177453_c1
476 nmdc:mga0qj67_24280_c1
477 nmdc:mga06r32_46617_c1
478 nmdc:mga08y16_118853_c1
479 nmdc:mga0n895_133385_c1
480 nmdc:mga0n895_150035_c1
481 nmdc:mga0rr50_108443_c1
482 Ga0495619_0005549
483 Ga0500651_0191703
484 Ga0500641_0008965
485 Ga0500568_0001032
486 Ga0501084_0044275
487 Ga0501082_0027988
488 Ga0530510_0324128

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13442

Cytochrome_CBB3

Cytochrome C oxidase, cbb3-type, subunit III

69

156

0.79

PF00034

Cytochrom_C

Cytochrome c

71

171

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lod-assembly1.cif.gz_E cryo-em structure of the air-oxidized photosynthetic alternative complex iii from roseiflexus castenholzii 0.8805 55 154
6loe-assembly1.cif.gz_E cryo-em structure of the dithionite-reduced photosynthetic alternative complex iii from roseiflexus castenholzii 0.8757 55 154
5mxy-assembly1.cif.gz_A kustc0563 c-type cytochrome 0.8407 66 150
6h5l-assembly1.cif.gz_B kuenenia stuttgartiensis reducing hao-like protein complex kustc0457/kustc0458 0.8338 55 150
6rte-assembly2.cif.gz_B dihydro-heme d1 dehydrogenase nirn in complex with dhe 0.8116 65 153
ID Description Score Start End Superfamily
2v08B00 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.7246 63 151 1.10.760.10
1ls9A00 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.7041 58 149 1.10.760.10
2v08B00 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.6787 63 151 1.10.760.10
af_P9WP35_148_241_1.10.760.10 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.6533 54 153 1.10.760.10
1ls9A00 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.6516 58 149 1.10.760.10
ID Description Score Start End GO Terms
AF-A0A1F7LIU8-F1-model_v4 Cytochrome c domain-containing protein 0.9416 45 153 GO:0009055
GO:0020037
GO:0046872
AF-A0A1F7LF21-F1-model_v4 Cytochrome c domain-containing protein 0.9378 45 153 GO:0009055
GO:0020037
GO:0046872
AF-A0A257LC53-F1-model_v4 Cytochrome C 0.933 45 148 GO:0009055
GO:0020037
GO:0046872
AF-A0A522FP82-F1-model_v4 Cytochrome c 0.9311 45 150 GO:0005506
GO:0009055
GO:0020037
AF-A0A532DS05-F1-model_v4 Cytochrome c 0.9306 63 151 GO:0005506
GO:0009055
GO:0020037

Map