F356056

General Info

Members Datasets Scaffolds Average Seq Length
243 170 177 480

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2585427594|2585842377
Length 531
Sequence NFPGRSAEDKNAKTSVGLPKIALWTITDVLNCYLSELESSNLDIAFNRQPHMHHDNLPSDPQDLQLPRRPLVAIIGGGISGAGVAYHLALAGRDRPPAITVFEPRAELGRGLAYDTSDPAHRINVPAARMSLLPEHPGDFLEWIELNDAIADDPAARRADGAIFPRRELFGRYVASALRPLVETGAVRHRRAVVTDVERDGAFWRISDSQGGQTFADYLVIATSHPSPSPPSALMALAGHPKFVADSTVPGALDAIDPDDRLLVVGNGLTAADVVASLEITGHRGPVTSISRRGLRSRGHPAVAQDPFGAFEMVPVESATQLLRLVRHTIREAEQAGLTWHAVLDQVRGHGHAIWWALPVSERRRIVRHLRPFWDVHRFRIAPQVEEVLDRAVANGRMEVLAASVANIRREGDDIGVVLRRRNGERLERVYDAMVVTTGPAHGGILNSQPWLARLRDLGHLQLDPTGLGIACNLSSEALAGDGRPDPTLLISGPLARGAFGELMGLPQITEHAVFVASELDRKVEKDLEDD

Samples

Sample ID Description Type Environment
1 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
2 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
3 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
4 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
5 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
6 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
7 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
8 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
9 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
10 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
11 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
12 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
13 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
14 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
15 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
16 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
17 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
18 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
19 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
20 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
21 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
22 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
23 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
24 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
25 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
26 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
27 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
28 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
29 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
30 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
31 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
32 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
33 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
34 2643221568 Rhizobium sp. Root564 Isolate Unclassified
35 2643221599 Rhizobium sp. Root708 Isolate Unclassified
36 2643221607 Rhizobium sp. Root73 Isolate Unclassified
37 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
38 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
39 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
40 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
41 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
42 2738541293 Rhizobium sp. GV031 Isolate Unclassified
43 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
44 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
45 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
46 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
47 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
48 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
49 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
50 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
51 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
52 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
53 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
54 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
55 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
56 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
57 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
58 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
59 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
60 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
61 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
62 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
63 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
64 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
65 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
66 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
67 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
68 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
69 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
70 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
71 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
72 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
73 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
74 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
75 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
76 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
77 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
78 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
79 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
80 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
81 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
82 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
83 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
84 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
85 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
86 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
87 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
88 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
89 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
90 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
91 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
92 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
93 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
94 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
95 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
96 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
98 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
99 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
100 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
101 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
102 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
103 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
104 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
105 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
107 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
112 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
113 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
114 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
115 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
118 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
119 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
120 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
121 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
122 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
123 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
124 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
127 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
128 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
129 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
130 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
131 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
134 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
135 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
136 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
137 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
138 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
145 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
146 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
149 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
150 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
151 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
152 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
153 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
154 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
155 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
156 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
157 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
158 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
159 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
160 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
161 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
162 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
163 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
164 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
165 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
166 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
167 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
168 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
169 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
170 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 72.84
Metatranscriptomes 0
Isolates 27.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27.16
Nodule 8.64
Rhizoplane 2.88
Rhizosphere 30.04
Stem 0
Stem Tuber 0
Unclassified 31.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10004257 3300001979 Bacteria 6167
2 JGI25155J39150_1000001 3300002704 Bacteria 354543
3 JGI25156J39149_1000001 3300002705 Bacteria 354557
4 JGI25162J39368_1000274 3300002737 Bacteria 49715
5 JGI25162J39368_1000281 3300002737 Bacteria 48327
6 JGI25154J39366_1000011 3300002738 Bacteria 296007
7 JGI25157J39369_1000079 3300002741 Bacteria 86111
8 JGI25152J39213_1001240 3300002773 Bacteria 11660
9 JGI25152J39213_1004944 3300002773 Bacteria 4041
10 JGI25150J39212_1000101 3300002774 Bacteria 49081
11 JGI25159J45721_1000899 3300002987 Bacteria 12944
12 JGI25151J46595_10000085 3300003187 Bacteria 127212
13 JGI25151J46595_10004562 3300003187 Bacteria 7300
14 JGI25151J46595_10007148 3300003187 Bacteria 5503
15 JGI25165J46597_1000337 3300003214 Bacteria 55143
16 JGI25165J46597_1002797 3300003214 Bacteria 5054
17 JGI25153J46596_10001648 3300003215 Bacteria 13243
18 JGI25153J46596_10004370 3300003215 Bacteria 7626
19 JGI25153J46596_10023193 3300003215 Bacteria 2267
20 rootH1_10076599 3300003316 Bacteria 6741
21 rootH2_10046137 3300003320 Bacteria 9360
22 rootH2_10150771 3300003320 Bacteria 2284
23 rootL2_10014621 3300003322 Bacteria 30950
24 rootH1_10040803 3300003323 Bacteria 2157
25 rootH1_10060301 3300003323 Bacteria 14970
26 JGI25160J50197_1000087 3300003354 Bacteria 93379
27 JGI25161J50226_1000066 3300003374 Bacteria 94505
28 Ga0055528_1000151 3300003790 Bacteria 57434
29 Ga0055528_1002943 3300003790 Bacteria 8829
30 Ga0055540_1001085 3300003792 Bacteria 17255
31 Ga0055543_1000059 3300004625 Bacteria 100942
32 Ga0055543_1000068 3300004625 Bacteria 94795
33 Ga0065165_1001143 3300005262 Bacteria 31090
34 Ga0065165_1002431 3300005262 Bacteria 15794
35 Ga0070665_100099214 3300005548 Bacteria 2916
36 Ga0070665_100181981 3300005548 Bacteria 2103
37 Ga0068856_100054895 3300005614 Bacteria 3931
38 Ga0075370_10002858 3300006353 Bacteria 8107
39 Ga0105251_10009084 3300009011 Bacteria 5917
40 Ga0105240_10000076 3300009093 Bacteria 198848
41 Ga0105239_10006650 3300010375 Bacteria 13381
42 Ga0157371_10000565 3300013102 Bacteria 43858
43 Ga0157370_10000046 3300013104 Bacteria 125612
44 Ga0209435_100012 3300025206 Bacteria 401621
45 Ga0209436_100006 3300025208 Bacteria 150277
46 Ga0209437_100047 3300025233 Bacteria 405163
47 Ga0209437_100242 3300025233 Bacteria 89060
48 Ga0207425_1000065 3300025245 Bacteria 127264
49 Ga0207425_1001780 3300025245 Bacteria 8374
50 Ga0209646_1000026 3300025246 Bacteria 401621
51 Ga0209026_1000014 3300025250 Bacteria 401621
52 Ga0209677_100220 3300025253 Bacteria 41510
53 Ga0209759_1000012 3300025256 Bacteria 401621
54 Ga0209129_1000132 3300025258 Bacteria 127262
55 Ga0209129_1000298 3300025258 Bacteria 46485
56 Ga0209129_1000761 3300025258 Bacteria 20501
57 Ga0209129_1001440 3300025258 Bacteria 13297
58 Ga0209129_1004427 3300025258 Bacteria 5482
59 Ga0209233_1000048 3300025261 Bacteria 453669
60 Ga0209233_1000069 3300025261 Bacteria 367639
61 Ga0209233_1000257 3300025261 Bacteria 80366
62 Ga0209673_1000239 3300025273 Bacteria 105502
63 Ga0209673_1003606 3300025273 Bacteria 8980
64 Ga0209673_1003785 3300025273 Bacteria 8594
65 Ga0209673_1004023 3300025273 Bacteria 8146
66 Ga0209130_1000002 3300025284 Bacteria 722648
67 Ga0209130_1000021 3300025284 Bacteria 374278
68 Ga0209025_1000247 3300025294 Bacteria 127264
69 Ga0209025_1003714 3300025294 Bacteria 14035
70 Ga0209025_1003762 3300025294 Bacteria 13903
71 Ga0209025_1011624 3300025294 Bacteria 5771
72 Ga0209564_1001293 3300025295 Bacteria 27231
73 Ga0209564_1012955 3300025295 Bacteria 3586
74 Ga0209758_1000212 3300025297 Bacteria 127597
75 Ga0209758_1001041 3300025297 Bacteria 36343
76 Ga0209758_1003799 3300025297 Bacteria 13297
77 Ga0209256_1000684 3300025299 Bacteria 45634
78 Ga0209256_1002511 3300025299 Bacteria 14752
79 Ga0209256_1006747 3300025299 Bacteria 5944
80 Ga0207426_1000010 3300025302 Bacteria 796003
81 Ga0207426_1000013 3300025302 Bacteria 721897
82 Ga0207426_1000172 3300025302 Bacteria 163690
83 Ga0209051_1021899 3300025303 Bacteria 2704
84 Ga0207695_10000011 3300025913 Bacteria 910221
85 Ga0207671_10001078 3300025914 Bacteria 33108
86 Ga0209371_1001986 3300027312 Bacteria 12346
87 Ga0307515_10001947 3300028794 Bacteria 45737
88 Ga0307515_10002407 3300028794 Bacteria 40813
89 Ga0268256_1006700 3300030500 Bacteria 4237
90 Ga0307513_10084016 3300031456 Bacteria 3272
91 Ga0307516_10041630 3300031730 Bacteria 4564
92 Ga0307405_10002213 3300031731 Bacteria 8492
93 Ga0307406_10087583 3300031901 Bacteria 2087
94 Ga0307412_10029447 3300031911 Bacteria 3446
95 Ga0439436_0004105 3300041404 Bacteria 4464
96 Ga0439465_0001429 3300041413 Bacteria 7725
97 Ga0439449_0030163 3300042007 Bacteria 2021
98 Ga0450918_007539 3300042531 Bacteria 1924
99 Ga0466963_0060085 3300044694 Bacteria 2538
100 Ga0466970_0000910 3300044765 Bacteria 14307
101 Ga0466958_0014746 3300045836 Bacteria 4464
102 Ga0466967_0126689 3300045976 Bacteria 2366
103 Ga0495638_0000169 3300046460 Bacteria 101640
104 Ga0495650_0045848 3300046471 Bacteria 1838
105 Ga0495607_0045454 3300046501 Bacteria 2583
106 Ga0495607_0071123 3300046501 Bacteria 1941
107 Ga0495606_0002308 3300046507 Bacteria 22483
108 Ga0495610_0005178 3300046512 Bacteria 9342
109 Ga0495610_0043011 3300046512 Bacteria 2254
110 Ga0495620_0028730 3300046515 Bacteria 2582
111 Ga0495620_0060969 3300046515 Unclassified 1571
112 Ga0495632_0003944 3300046519 Bacteria 10297
113 Ga0495643_0028586 3300046522 Bacteria 3124
114 Ga0495643_0057984 3300046522 Bacteria 2062
115 Ga0495644_0028900 3300046523 Bacteria 2097
116 Ga0495668_0055457 3300046616 Bacteria 2188
117 Ga0495625_0028075 3300046660 Bacteria 4224
118 Ga0495625_0028722 3300046660 Bacteria 4167
119 Ga0495625_0045387 3300046660 Bacteria 3177
120 Ga0495672_0031885 3300047320 Bacteria 3285
121 Ga0495687_026541 3300047443 Bacteria 2724
122 Ga0495686_0000045 3300047472 Bacteria 284761
123 Ga0495686_0001513 3300047472 Bacteria 25024
124 Ga0496101_0069784 3300048904 Bacteria 2572
125 Ga0496101_0097648 3300048904 Bacteria 2194
126 Ga0496102_0004086 3300048905 Bacteria 12369
127 Ga0496106_0026717 3300048909 Bacteria 4299
128 Ga0496110_0022172 3300048913 Bacteria 5388
129 Ga0496113_0036942 3300048916 Bacteria 3582
130 Ga0496116_0000407 3300048919 Bacteria 61995
131 Ga0496116_0001299 3300048919 Bacteria 28556
132 Ga0496116_0003381 3300048919 Bacteria 15818
133 Ga0496116_0009589 3300048919 Bacteria 8239
134 Ga0496116_0022171 3300048919 Bacteria 4768
135 Ga0496117_0002912 3300048920 Bacteria 20710
136 Ga0496117_0004446 3300048920 Bacteria 15458
137 Ga0496117_0009262 3300048920 Bacteria 9200
138 Ga0496117_0040310 3300048920 Bacteria 3436
139 Ga0496117_0044210 3300048920 Bacteria 3229
140 Ga0496118_0003223 3300048921 Bacteria 20828
141 Ga0496118_0003276 3300048921 Bacteria 20611
142 Ga0496118_0007597 3300048921 Bacteria 11428
143 Ga0496118_0052783 3300048921 Bacteria 3096
144 Ga0496119_0005322 3300048922 Bacteria 12384
145 Ga0496119_0019428 3300048922 Bacteria 5006
146 Ga0496119_0035697 3300048922 Bacteria 3253
147 Ga0496119_0082739 3300048922 Bacteria 1845
148 Ga0496120_0012984 3300048923 Bacteria 5635
149 Ga0496121_0002466 3300048924 Bacteria 28236
150 Ga0496121_0006899 3300048924 Bacteria 13860
151 Ga0496121_0048206 3300048924 Bacteria 3627
152 Ga0496121_0100770 3300048924 Bacteria 2229
153 Ga0496121_0200213 3300048924 Bacteria 1424
154 Ga0496122_0007284 3300048925 Bacteria 12364
155 Ga0496122_0011335 3300048925 Bacteria 9046
156 Ga0496122_0024362 3300048925 Bacteria 5297
157 Ga0496122_0028289 3300048925 Bacteria 4762
158 Ga0496122_0029446 3300048925 Bacteria 4630
159 Ga0496123_0007337 3300048926 Bacteria 10442
160 Ga0496123_0018459 3300048926 Bacteria 5548
161 Ga0496123_0026293 3300048926 Bacteria 4363
162 Ga0496124_0004043 3300048927 Bacteria 17416
163 Ga0496124_0004630 3300048927 Bacteria 15937
164 Ga0496124_0022066 3300048927 Bacteria 5847
165 Ga0496124_0047260 3300048927 Bacteria 3683
166 Ga0496125_0004078 3300048928 Bacteria 17091
167 Ga0496125_0007421 3300048928 Bacteria 11661
168 Ga0496126_0112401 3300048929 Bacteria 2372
169 Ga0496126_0168589 3300048929 Bacteria 1867
170 Ga0495678_017292 3300049459 Bacteria 3272
171 Ga0495682_0013352 3300049460 Bacteria 3129
172 nmdc:mga0sz30_11160_c2 3300050516 Bacteria 2276
173 Ga0500610_0034390 3300053079 Bacteria 2593
174 Ga0500608_032158 3300053122 Bacteria 2492
175 Ga0500618_000741 3300053125 Bacteria 18591
176 Ga0500568_0006257 3300053139 Bacteria 6007
177 Ga0500588_0001603 3300053146 Bacteria 4360

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048924 Ga0496121_0200213 Ga0496121_0200213_201_1412 403
2 3300046522 Ga0495643_0057984 Ga0495643_0057984_20_1267 415
3 3300048925 Ga0496122_0024362 Ga0496122_0024362_2252_3499 415
4 3300048922 Ga0496119_0035697 Ga0496119_0035697_635_1933 432
5 3300048927 Ga0496124_0022066 Ga0496124_0022066_574_1872 432
6 3300048929 Ga0496126_0168589 Ga0496126_0168589_113_1411 432
7 3300031731 Ga0307405_10002213 Ga0307405_100022134 447
8 3300028794 Ga0307515_10001947 Ga0307515_1000194711 451
9 3300031730 Ga0307516_10041630 Ga0307516_100416303 452
10 3300053146 Ga0500588_0001603 Ga0500588_0001603_1821_3266 453
11 3300047472 Ga0495686_0000045 Ga0495686_0000045_234444_235865 456
12 iso_pu_bacteria 2923556063 2923556871 456
13 iso_pu_bacteria 2534681796 2535520116 457
14 3300046512 Ga0495610_0043011 Ga0495610_0043011_640_2019 459
15 3300046523 Ga0495644_0028900 Ga0495644_0028900_448_1827 459
16 3300046515 Ga0495620_0060969 Ga0495620_0060969_177_1559 460
17 3300031456 Ga0307513_10084016 Ga0307513_100840162 462
18 iso_pu_bacteria 2510917028 2511185015 462
19 iso_pu_bacteria 2513237146 2513929744 463
20 iso_pu_bacteria 2599185170 2599415162 463
21 iso_pu_bacteria 2838035591 2838039113 463
22 iso_pu_bacteria 2838661181 2838664296 463
23 3300025273 Ga0209673_1000239 Ga0209673_100023943 464
24 3300025294 Ga0209025_1011624 Ga0209025_10116245 464
25 3300025295 Ga0209564_1012955 Ga0209564_10129552 464
26 3300025299 Ga0209256_1000684 Ga0209256_100068432 464
27 iso_pu_bacteria 2513237144 2513912262 464
28 3300042007 Ga0439449_0030163 Ga0439449_0030163_85_1497 467
29 3300002987 JGI25159J45721_1000899 JGI25159J45721_10008992 468
30 3300003187 JGI25151J46595_10004562 JGI25151J46595_100045626 468
31 3300003187 JGI25151J46595_10007148 JGI25151J46595_100071482 468
32 3300003215 JGI25153J46596_10004370 JGI25153J46596_100043706 468
33 3300003323 rootH1_10040803 rootH1_100408032 468
34 3300003790 Ga0055528_1002943 Ga0055528_10029434 468
35 3300003792 Ga0055540_1001085 Ga0055540_100108512 468
36 3300004625 Ga0055543_1000059 Ga0055543_10000599 468
37 3300005548 Ga0070665_100181981 Ga0070665_1001819811 468
38 3300025208 Ga0209436_100006 Ga0209436_10000624 468
39 3300025258 Ga0209129_1000298 Ga0209129_10002987 468
40 3300025258 Ga0209129_1000761 Ga0209129_10007614 468
41 3300025273 Ga0209673_1003785 Ga0209673_10037853 468
42 3300025273 Ga0209673_1004023 Ga0209673_10040237 468
43 3300025284 Ga0209130_1000002 Ga0209130_1000002160 468
44 3300025294 Ga0209025_1003762 Ga0209025_100376212 468
45 3300025295 Ga0209564_1001293 Ga0209564_100129312 468
46 3300025297 Ga0209758_1001041 Ga0209758_100104114 468
47 3300025299 Ga0209256_1002511 Ga0209256_100251112 468
48 3300025302 Ga0207426_1000013 Ga0207426_1000013160 468
49 3300025302 Ga0207426_1000172 Ga0207426_10001728 468
50 3300025303 Ga0209051_1021899 Ga0209051_10218992 468
51 3300048920 Ga0496117_0040310 Ga0496117_0040310_1964_3415 468
52 3300048921 Ga0496118_0003276 Ga0496118_0003276_8294_9745 468
53 3300048925 Ga0496122_0028289 Ga0496122_0028289_147_1598 468
54 3300048926 Ga0496123_0026293 Ga0496123_0026293_2804_4255 468
55 3300048928 Ga0496125_0004078 Ga0496125_0004078_7131_8582 468
56 3300050516 nmdc:mga0sz30_11160_c2 nmdc:mga0sz30_11160_c2_446_1897 468
57 iso_pu_bacteria 2582581294 2585204197 468
58 iso_pu_bacteria 8005542996 8005547853 468
59 3300048924 Ga0496121_0100770 Ga0496121_0100770_765_2207 469
60 3300053122 Ga0500608_032158 Ga0500608_032158_466_1875 469
61 iso_pu_bacteria 2857531043 2857536803 469
62 iso_pu_bacteria 2643221568 2643853906 470
63 3300003316 rootH1_10076599 rootH1_100765994 471
64 3300003790 Ga0055528_1000151 Ga0055528_100015114 471
65 3300031911 Ga0307412_10029447 Ga0307412_100294472 471
66 3300025299 Ga0209256_1006747 Ga0209256_10067476 472
67 3300031901 Ga0307406_10087583 Ga0307406_100875831 472
68 3300048904 Ga0496101_0069784 Ga0496101_0069784_414_1853 472
69 3300048919 Ga0496116_0000407 Ga0496116_0000407_23422_24849 472
70 3300048919 Ga0496116_0003381 Ga0496116_0003381_5009_6448 472
71 3300048920 Ga0496117_0002912 Ga0496117_0002912_4530_5969 472
72 3300048921 Ga0496118_0003223 Ga0496118_0003223_15088_16527 472
73 3300048925 Ga0496122_0011335 Ga0496122_0011335_3015_4454 472
74 3300048926 Ga0496123_0007337 Ga0496123_0007337_3934_5373 472
75 3300048927 Ga0496124_0004630 Ga0496124_0004630_9383_10822 472
76 iso_pu_bacteria 2582581299 2585228180 472
77 iso_pu_bacteria 2582581304 2585258622 472
78 iso_pu_bacteria 2643221599 2644004061 472
79 iso_pu_bacteria 2643221634 2644191622 472
80 iso_pu_bacteria 3005452660 3005457107 472
81 3300046660 Ga0495625_0028075 Ga0495625_0028075_1332_2771 473
82 3300048919 Ga0496116_0009589 Ga0496116_0009589_3199_4674 473
83 iso_pu_bacteria 2513237088 2513595174 473
84 iso_pu_bacteria 2513237138 2513866643 473
85 iso_pu_bacteria 2582581867 2585401548 473
86 iso_pu_bacteria 2585427590 2585821240 473
87 3300002773 JGI25152J39213_1001240 JGI25152J39213_10012402 474
88 3300002773 JGI25152J39213_1004944 JGI25152J39213_10049445 474
89 3300002774 JGI25150J39212_1000101 JGI25150J39212_100010146 474
90 3300003187 JGI25151J46595_10000085 JGI25151J46595_100000851 474
91 3300003215 JGI25153J46596_10001648 JGI25153J46596_1000164810 474
92 3300003215 JGI25153J46596_10023193 JGI25153J46596_100231932 474
93 3300009011 Ga0105251_10009084 Ga0105251_100090844 474
94 3300013102 Ga0157371_10000565 Ga0157371_1000056524 474
95 3300025245 Ga0207425_1000065 Ga0207425_10000651 474
96 3300025245 Ga0207425_1001780 Ga0207425_10017803 474
97 3300025258 Ga0209129_1000132 Ga0209129_10001321 474
98 3300025258 Ga0209129_1001440 Ga0209129_100144010 474
99 3300025258 Ga0209129_1004427 Ga0209129_10044274 474
100 3300025273 Ga0209673_1003606 Ga0209673_10036065 474
101 3300025294 Ga0209025_1000247 Ga0209025_10002471 474
102 3300025294 Ga0209025_1003714 Ga0209025_100371412 474
103 3300025297 Ga0209758_1000212 Ga0209758_10002121 474
104 3300025297 Ga0209758_1003799 Ga0209758_100379910 474
105 3300046471 Ga0495650_0045848 Ga0495650_0045848_120_1562 474
106 3300046512 Ga0495610_0005178 Ga0495610_0005178_5879_7321 474
107 3300046519 Ga0495632_0003944 Ga0495632_0003944_2467_3915 474
108 3300048904 Ga0496101_0097648 Ga0496101_0097648_490_1935 474
109 3300048913 Ga0496110_0022172 Ga0496110_0022172_1664_3172 474
110 3300048916 Ga0496113_0036942 Ga0496113_0036942_406_1914 474
111 3300048919 Ga0496116_0001299 Ga0496116_0001299_25544_26989 474
112 3300048919 Ga0496116_0022171 Ga0496116_0022171_1027_2535 474
113 3300048920 Ga0496117_0009262 Ga0496117_0009262_3558_5003 474
114 3300048921 Ga0496118_0052783 Ga0496118_0052783_1529_2974 474
115 3300048922 Ga0496119_0019428 Ga0496119_0019428_2099_3544 474
116 3300048925 Ga0496122_0029446 Ga0496122_0029446_66_1511 474
117 3300048926 Ga0496123_0018459 Ga0496123_0018459_3721_5166 474
118 3300048929 Ga0496126_0112401 Ga0496126_0112401_279_1724 474
119 3300049459 Ga0495678_017292 Ga0495678_017292_188_1630 474
120 iso_pu_bacteria 2585427594 2585842377 474
121 iso_pu_bacteria 2738541293 2738802652 474
122 3300046460 Ga0495638_0000169 Ga0495638_0000169_22105_23553 475
123 3300046501 Ga0495607_0045454 Ga0495607_0045454_297_1745 475
124 3300046515 Ga0495620_0028730 Ga0495620_0028730_427_1875 475
125 3300046522 Ga0495643_0028586 Ga0495643_0028586_341_1789 475
126 3300046616 Ga0495668_0055457 Ga0495668_0055457_518_1966 475
127 3300046660 Ga0495625_0028722 Ga0495625_0028722_398_1846 475
128 3300047320 Ga0495672_0031885 Ga0495672_0031885_1247_2695 475
129 3300049460 Ga0495682_0013352 Ga0495682_0013352_1150_2598 475
130 3300053079 Ga0500610_0034390 Ga0500610_0034390_587_2035 475
131 3300053139 Ga0500568_0006257 Ga0500568_0006257_590_2038 475
132 iso_pu_bacteria 2508501122 2509111050 475
133 3300005262 Ga0065165_1002431 Ga0065165_10024316 476
134 3300048924 Ga0496121_0048206 Ga0496121_0048206_550_2154 477
135 iso_pu_bacteria 3005409236 3005413585 478
136 3300003320 rootH2_10150771 rootH2_101507712 479
137 3300028794 Ga0307515_10002407 Ga0307515_1000240726 479
138 3300041404 Ga0439436_0004105 Ga0439436_0004105_2550_4031 479
139 3300041413 Ga0439465_0001429 Ga0439465_0001429_3397_4878 479
140 3300042531 Ga0450918_007539 Ga0450918_007539_20_1501 479
141 3300046507 Ga0495606_0002308 Ga0495606_0002308_16148_17587 479
142 3300046660 Ga0495625_0045387 Ga0495625_0045387_584_2065 479
143 3300048924 Ga0496121_0006899 Ga0496121_0006899_764_2203 479
144 iso_pu_bacteria 2513237159 2514002351 479
145 iso_pu_bacteria 2582581306 2585266769 479
146 iso_pu_bacteria 2582581865 2585387810 479
147 iso_pu_bacteria 2582581866 2585398042 479
148 iso_pu_bacteria 2643221607 2644051889 479
149 iso_pu_bacteria 2643221636 2644201554 479
150 iso_pu_bacteria 2643221686 2644484342 479
151 iso_pu_bacteria 2842521101 2842524341 479
152 3300047472 Ga0495686_0001513 Ga0495686_0001513_13038_14480 480
153 iso_pu_bacteria 8057575449 8057575860 480
154 iso_pu_bacteria 2643221689 2644499927 481
155 iso_pu_bacteria 2582581308 2585277368 482
156 iso_pu_bacteria 2582581315 2585323459 482
157 iso_pu_bacteria 2582581316 2585331594 482
158 iso_pu_bacteria 2585427527 2585534994 482
159 iso_pu_bacteria 2585427530 2585555842 482
160 iso_pu_bacteria 2615840626 2616308748 482
161 iso_pu_bacteria 2615840698 2616556948 482
162 iso_pu_bacteria 2617270742 2617386489 482
163 iso_pu_bacteria 2775507266 2778175300 482
164 iso_pu_bacteria 2818991448 2819609027 482
165 iso_pu_bacteria 2818991453 2819637743 482
166 iso_pu_bacteria 2838029111 2838029927 482
167 iso_pu_bacteria 2842475841 2842476788 482
168 iso_pu_bacteria 2842482326 2842484681 482
169 iso_pu_bacteria 2842502639 2842503455 482
170 iso_pu_bacteria 3005416602 3005419940 482
171 iso_pu_bacteria 8005314921 8005316891 482
172 iso_pu_bacteria 8005484373 8005485310 482
173 iso_pu_bacteria 8005645114 8005649701 482
174 iso_pu_bacteria 8005682033 8005683013 482
175 iso_pu_bacteria 2510917022 2511135281 483
176 iso_pu_bacteria 2582581307 2585271018 483
177 iso_pu_bacteria 2585427531 2585558742 483
178 iso_pu_bacteria 2585427608 2585898136 483
179 iso_pu_bacteria 2585427609 2585904288 483
180 iso_pu_bacteria 2585428125 2587980595 483
181 iso_pu_bacteria 2667528174 2671111557 483
182 iso_pu_bacteria 2852387548 2852390096 483
183 iso_pu_bacteria 2919408235 2919411527 483
184 iso_pu_bacteria 8046767195 8046772296 483
185 iso_pu_bacteria 2582581283 2585166876 484
186 3300002704 JGI25155J39150_1000001 JGI25155J39150_1000001178 486
187 3300002705 JGI25156J39149_1000001 JGI25156J39149_1000001154 486
188 3300002737 JGI25162J39368_1000274 JGI25162J39368_100027445 486
189 3300002738 JGI25154J39366_1000011 JGI25154J39366_1000011229 486
190 3300002741 JGI25157J39369_1000079 JGI25157J39369_100007948 486
191 3300003214 JGI25165J46597_1002797 JGI25165J46597_10027973 486
192 3300003320 rootH2_10046137 rootH2_100461374 486
193 3300003322 rootL2_10014621 rootL2_1001462118 486
194 3300003323 rootH1_10060301 rootH1_1006030114 486
195 3300005548 Ga0070665_100099214 Ga0070665_1000992143 486
196 3300005614 Ga0068856_100054895 Ga0068856_1000548952 486
197 3300009093 Ga0105240_10000076 Ga0105240_1000007642 486
198 3300010375 Ga0105239_10006650 Ga0105239_1000665014 486
199 3300013104 Ga0157370_10000046 Ga0157370_1000004614 486
200 3300025206 Ga0209435_100012 Ga0209435_100012229 486
201 3300025233 Ga0209437_100242 Ga0209437_10024230 486
202 3300025246 Ga0209646_1000026 Ga0209646_1000026229 486
203 3300025250 Ga0209026_1000014 Ga0209026_1000014229 486
204 3300025253 Ga0209677_100220 Ga0209677_10022021 486
205 3300025256 Ga0209759_1000012 Ga0209759_1000012229 486
206 3300025261 Ga0209233_1000069 Ga0209233_1000069102 486
207 3300025261 Ga0209233_1000257 Ga0209233_100025715 486
208 3300025913 Ga0207695_10000011 Ga0207695_10000011155 486
209 3300025914 Ga0207671_10001078 Ga0207671_1000107829 486
210 3300027312 Ga0209371_1001986 Ga0209371_10019863 486
211 3300030500 Ga0268256_1006700 Ga0268256_10067003 486
212 3300044694 Ga0466963_0060085 Ga0466963_0060085_233_1693 486
213 3300044765 Ga0466970_0000910 Ga0466970_0000910_6122_7582 486
214 3300045836 Ga0466958_0014746 Ga0466958_0014746_1461_2921 486
215 3300045976 Ga0466967_0126689 Ga0466967_0126689_250_1710 486
216 3300048905 Ga0496102_0004086 Ga0496102_0004086_4172_5632 486
217 3300048909 Ga0496106_0026717 Ga0496106_0026717_1409_2869 486
218 3300048920 Ga0496117_0004446 Ga0496117_0004446_2198_3658 486
219 3300048921 Ga0496118_0007597 Ga0496118_0007597_2198_3658 486
220 3300048922 Ga0496119_0082739 Ga0496119_0082739_84_1544 486
221 3300048924 Ga0496121_0002466 Ga0496121_0002466_7767_9227 486
222 3300048925 Ga0496122_0007284 Ga0496122_0007284_84_1544 486
223 3300048927 Ga0496124_0004043 Ga0496124_0004043_5793_7253 486
224 3300048928 Ga0496125_0007421 Ga0496125_0007421_3223_4683 486
225 3300053125 Ga0500618_000741 Ga0500618_000741_9958_11418 486
226 3300001979 JGI24740J21852_10004257 JGI24740J21852_100042576 487
227 3300002737 JGI25162J39368_1000281 JGI25162J39368_10002815 487
228 3300003214 JGI25165J46597_1000337 JGI25165J46597_100033751 487
229 3300003354 JGI25160J50197_1000087 JGI25160J50197_10000874 487
230 3300003374 JGI25161J50226_1000066 JGI25161J50226_100006692 487
231 3300004625 Ga0055543_1000068 Ga0055543_10000684 487
232 3300005262 Ga0065165_1001143 Ga0065165_100114329 487
233 3300006353 Ga0075370_10002858 Ga0075370_100028587 487
234 3300025233 Ga0209437_100047 Ga0209437_10004767 487
235 3300025261 Ga0209233_1000048 Ga0209233_1000048334 487
236 3300025284 Ga0209130_1000021 Ga0209130_1000021353 487
237 3300025302 Ga0207426_1000010 Ga0207426_10000104 487
238 3300046501 Ga0495607_0071123 Ga0495607_0071123_246_1769 487
239 3300047443 Ga0495687_026541 Ga0495687_026541_1156_2679 487
240 3300048920 Ga0496117_0044210 Ga0496117_0044210_736_2199 487
241 3300048922 Ga0496119_0005322 Ga0496119_0005322_6714_8177 487
242 3300048923 Ga0496120_0012984 Ga0496120_0012984_2698_4161 487
243 3300048927 Ga0496124_0047260 Ga0496124_0047260_158_1621 487

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13454

NAD_binding_9

FAD-NAD(P)-binding

73

226

0.95

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

74

139

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2rcy-assembly1.cif.gz_A crystal structure of plasmodium falciparum pyrroline carboxylate reductase (mal13p1.284) with nadp bound 0.8856 13 50
5uau-assembly1.cif.gz_C structure of human pycr-1 complexed with proline 0.8541 13 48
6xp0-assembly1.cif.gz_A-2 structure of human pycr1 complexed with n-formyl l-proline 0.8496 13 48
5uax-assembly1.cif.gz_C structure of apo human pycr-1 crystallized in space group c2 0.8393 13 46
5uaw-assembly1.cif.gz_B structure of apo human pycr-1 crystallized in space group p21212 0.8389 13 48
ID Description Score Start End Superfamily
af_K7MGU6_20_214_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9044 137 158 3.40.50.300
af_A0A0P0VCV0_7_225_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8806 133 159 2.130.10.10
af_Q9SKB7_437_561_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.8779 133 158 2.40.128.630
af_K7LJY2_327_523_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.877 133 158 2.40.128.630
af_O44771_122_233_2.170.16.10 Mainly Beta;Beta Complex;Endonuclease - Pi-scei; Chain A, domain 1;Hedgehog/Intein (Hint) domain 0.8765 347 375 2.170.16.10
ID Description Score Start End GO Terms
AF-A0A1C3X9D1-F1-model_v4 Uncharacterized NAD(P)/FAD-binding protein YdhS 0.9623 1 476 GO:0016020
AF-A0A4S5J7X4-F1-model_v4 deleted 0.9586 12 476
AF-A0A4R3FCH9-F1-model_v4 Putative NAD(P)/FAD-binding protein YdhS 0.957 6 476
AF-A0A2S6N958-F1-model_v4 FAD-dependent urate hydroxylase HpyO/Asp monooxygenase CreE-like FAD/NAD(P)-binding domain-containing protein 0.957 5 471
AF-A0A246U9B3-F1-model_v4 Hydroxyacylglutathione hydrolase 0.9569 14 475 GO:0016787

Feature Viewer

pLDDT pTM Quality
88.59 0.88 High
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Predicted Structure (AlphaFold2)

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