F355922

General Info

Members Datasets Scaffolds Average Seq Length
243 190 486 286

Family's Representative Sequence

Representative Sequence 3300047321|Ga0495676_0001143|Ga0495676_0001143_1660_2622
Length 320
Sequence MGLSWQQGPLSSTALGRFLTPEPLPERLLFAERLRRRMRVRFGGEWIADSEDVVLLHEPGRYPVAYFPLSSLRSDVLETSGRTTQHRELGETSWFTVDVGGRRTERAAWQFTALPSYAGELEGRVAFAWRAMDAFYEEDERILGHAADAYHRIDIRDTSRTLEVRSGDTVIARTTRPVVLYESGFAPRWYVPREDVQEKELTPVEGRTFCPYKGLAGYYDIGEAKKAAWSYREAYPEVGRVDDLVSFEPDKVEVYLDGERLHLEPGQQVVPHGVDRSLGTDEVLSHRDSRRGAAARARALRPFRDTGPERRLTAKGAPSP

Samples

Sample ID Description Type Environment
1 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
2 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
42 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
100 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
105 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
112 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
113 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
114 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
115 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
118 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
119 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
120 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
125 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
126 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
129 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
130 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
131 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
132 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
133 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
134 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
135 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
136 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
137 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
138 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
139 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
142 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
143 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
144 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
145 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
146 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
150 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
151 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
152 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
153 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
154 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
155 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
156 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
157 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
158 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
159 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
160 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
161 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
175 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
177 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
178 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
179 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
180 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
181 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
182 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
183 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
184 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
185 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
186 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
187 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
188 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
189 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
190 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.53
Metatranscriptomes 0.82
Isolates 1.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.29
Nodule 0
Rhizoplane 4.53
Rhizosphere 87.65
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495676_0001143 3300047321 Bacteria 22539
2 Ga0055540_1003996 3300003792 Bacteria 6865
3 Ga0068868_100483516 3300005338 Bacteria 1082
4 Ga0070691_10057719 3300005341 Bacteria 1863
5 Ga0070668_100436312 3300005347 Bacteria 1124
6 Ga0070675_100140073 3300005354 Bacteria 2067
7 Ga0070673_100027970 3300005364 Bacteria 4187
8 Ga0070673_100108349 3300005364 Bacteria 2300
9 Ga0070659_100124791 3300005366 Bacteria 2088
10 Ga0070709_10204633 3300005434 Bacteria 1400
11 Ga0070714_100044090 3300005435 Bacteria 3775
12 Ga0070714_100062072 3300005435 Bacteria 3211
13 Ga0070710_10008009 3300005437 Bacteria 5137
14 Ga0070701_10111553 3300005438 Bacteria 1529
15 Ga0070711_100017357 3300005439 Bacteria 4582
16 Ga0070705_100041848 3300005440 Bacteria 2615
17 Ga0070708_100019623 3300005445 Bacteria 5684
18 Ga0070663_100201187 3300005455 Bacteria 1555
19 Ga0070662_100107852 3300005457 Bacteria 2117
20 Ga0068867_100151400 3300005459 Bacteria 1822
21 Ga0070706_100002536 3300005467 Bacteria 18359
22 Ga0070706_100097793 3300005467 Bacteria 2727
23 Ga0070707_100005209 3300005468 Bacteria 12171
24 Ga0070707_100027287 3300005468 Bacteria 5433
25 Ga0070698_100149605 3300005471 Bacteria 2283
26 Ga0070699_100002205 3300005518 Bacteria 17625
27 Ga0070699_100003925 3300005518 Bacteria 13134
28 Ga0070679_100454639 3300005530 Bacteria 1225
29 Ga0070684_100210296 3300005535 Bacteria 1773
30 Ga0070697_100001843 3300005536 Bacteria 16198
31 Ga0070672_100096250 3300005543 Bacteria 2395
32 Ga0070686_100296806 3300005544 Bacteria 1197
33 Ga0070696_100022702 3300005546 Bacteria 4264
34 Ga0070693_100176857 3300005547 Bacteria 1371
35 Ga0070665_100011856 3300005548 Bacteria 8805
36 Ga0070665_100252265 3300005548 Bacteria 1765
37 Ga0070702_100044524 3300005615 Bacteria 2506
38 Ga0068852_100208518 3300005616 Bacteria 1852
39 Ga0068864_100110670 3300005618 Bacteria 2446
40 Ga0068861_100014048 3300005719 Bacteria 5614
41 Ga0068863_100100658 3300005841 Bacteria 2747
42 Ga0068858_100067108 3300005842 Bacteria 3322
43 Ga0081455_10095036 3300005937 Bacteria 2406
44 Ga0081540_1000118 3300005983 Bacteria 84097
45 Ga0081540_1013492 3300005983 Bacteria 5308
46 Ga0070717_10003186 3300006028 Bacteria 11722
47 Ga0070717_10464523 3300006028 Bacteria 1142
48 Ga0075365_10026488 3300006038 Bacteria 3682
49 Ga0075364_10095462 3300006051 Bacteria 1977
50 Ga0075432_10030680 3300006058 Bacteria 1858
51 Ga0070716_100028107 3300006173 Bacteria 3029
52 Ga0070712_100023510 3300006175 Bacteria 4073
53 Ga0075428_100027481 3300006844 Bacteria 6295
54 Ga0075430_100095419 3300006846 Bacteria 2486
55 Ga0075431_100030123 3300006847 Bacteria 5588
56 Ga0075433_10005988 3300006852 Bacteria 9580
57 Ga0111539_10012206 3300009094 Bacteria 10774
58 Ga0105247_10014354 3300009101 Bacteria 4756
59 Ga0114129_10065057 3300009147 Bacteria 5090
60 Ga0114129_10126342 3300009147 Bacteria 3516
61 Ga0105243_10137030 3300009148 Bacteria 2084
62 Ga0105243_10414304 3300009148 Bacteria 1255
63 Ga0105248_10310047 3300009177 Bacteria 1777
64 Ga0105237_10000896 3300009545 Bacteria 40183
65 Ga0105237_10088355 3300009545 Bacteria 3089
66 Ga0105249_10099350 3300009553 Bacteria 2735
67 Ga0105239_10000962 3300010375 Bacteria 40426
68 Ga0105246_10008424 3300011119 Bacteria 6336
69 Ga0157369_10099191 3300013105 Bacteria 3106
70 Ga0157378_10118867 3300013297 Bacteria 2433
71 Ga0163162_10442604 3300013306 Bacteria 1432
72 Ga0157372_10546517 3300013307 Bacteria 1350
73 Ga0163161_10006998 3300017792 Bacteria 7800
74 Ga0163161_10070377 3300017792 Bacteria 2558
75 Ga0206350_11419015 3300020080 Bacteria 2538
76 Ga0213876_10043500 3300021384 Bacteria 2374
77 Ga0224712_10023105 3300022467 Bacteria 2154
78 Ga0209051_1000996 3300025303 Bacteria 27193
79 Ga0207656_10133061 3300025321 Bacteria 1167
80 Ga0207710_10013111 3300025900 Bacteria 3491
81 Ga0207688_10000886 3300025901 Bacteria 15117
82 Ga0207680_10092281 3300025903 Bacteria 1929
83 Ga0207647_10054608 3300025904 Bacteria 2457
84 Ga0207699_10090550 3300025906 Bacteria 1919
85 Ga0207699_10243857 3300025906 Bacteria 1236
86 Ga0207645_10042739 3300025907 Bacteria 2899
87 Ga0207684_10013850 3300025910 Bacteria 6965
88 Ga0207684_10119102 3300025910 Bacteria 2263
89 Ga0207693_10003088 3300025915 Bacteria 14349
90 Ga0207693_10009614 3300025915 Bacteria 7874
91 Ga0207663_10218242 3300025916 Bacteria 1386
92 Ga0207660_10502208 3300025917 Bacteria 984
93 Ga0207646_10006134 3300025922 Bacteria 12502
94 Ga0207646_10065402 3300025922 Bacteria 3246
95 Ga0207681_10233073 3300025923 Bacteria 1430
96 Ga0207687_10023546 3300025927 Bacteria 4107
97 Ga0207706_10008921 3300025933 Bacteria 9230
98 Ga0207709_10118425 3300025935 Bacteria 1784
99 Ga0207669_10290103 3300025937 Bacteria 1238
100 Ga0207665_10041997 3300025939 Bacteria 3056
101 Ga0207689_10015293 3300025942 Bacteria 6496
102 Ga0207668_10108684 3300025972 Bacteria 2076
103 Ga0207639_10101553 3300026041 Bacteria 2326
104 Ga0207678_10008951 3300026067 Bacteria 8817
105 Ga0207708_10006358 3300026075 Bacteria 8753
106 Ga0207648_10036466 3300026089 Bacteria 4331
107 Ga0207675_100010102 3300026118 Bacteria 8845
108 Ga0207675_100088190 3300026118 Bacteria 2914
109 Ga0207683_10012497 3300026121 Bacteria 7243
110 Ga0207698_10184581 3300026142 Bacteria 1851
111 Ga0268266_10023153 3300028379 Bacteria 5288
112 Ga0268266_10220765 3300028379 Bacteria 1742
113 Ga0268264_10479924 3300028381 Bacteria 1209
114 Ga0307513_10012598 3300031456 Bacteria 10425
115 Ga0307513_10208618 3300031456 Bacteria 1787
116 Ga0307516_10014961 3300031730 Bacteria 8182
117 Ga0307416_100185107 3300032002 Bacteria 1957
118 Ga0307507_10000005 3300033179 Bacteria 281494
119 Ga0373932_0017553 3300035112 Bacteria 1839
120 Ga0395899_0014927 3300037312 Bacteria 5924
121 Ga0395900_0366938 3300037418 Bacteria 1410
122 Ga0436365_0502806 3300039437 Bacteria 15120
123 Ga0466965_0171102 3300044683 Bacteria 1143
124 Ga0466971_0035088 3300044719 Bacteria 2249
125 Ga0466967_0020305 3300045976 Bacteria 5366
126 Ga0495592_0016342 3300046454 Bacteria 5631
127 Ga0495603_0000401 3300046455 Bacteria 23848
128 Ga0495603_0015924 3300046455 Bacteria 4544
129 Ga0495603_0058483 3300046455 Bacteria 2279
130 Ga0495603_0185688 3300046455 Bacteria 1202
131 Ga0495629_0022170 3300046459 Bacteria 4529
132 Ga0495629_0051845 3300046459 Bacteria 2871
133 Ga0495629_0130225 3300046459 Bacteria 1752
134 Ga0495651_0106607 3300046462 Bacteria 2077
135 Ga0495605_0008135 3300046474 Bacteria 5930
136 Ga0495664_0084805 3300046477 Bacteria 1902
137 Ga0495585_0026236 3300046492 Bacteria 3328
138 Ga0495594_0002506 3300046499 Bacteria 9564
139 Ga0495607_0028046 3300046501 Bacteria 3477
140 Ga0495606_0045851 3300046507 Bacteria 2893
141 Ga0495610_0039331 3300046512 Bacteria 2393
142 Ga0495618_0167596 3300046514 Bacteria 1398
143 Ga0495628_0059011 3300046516 Bacteria 3014
144 Ga0495631_0007295 3300046518 Bacteria 5631
145 Ga0495643_0177133 3300046522 Bacteria 1039
146 Ga0495648_0046637 3300046524 Bacteria 2684
147 Ga0495648_0048862 3300046524 Bacteria 2599
148 Ga0495652_0083204 3300046529 Bacteria 2635
149 Ga0495621_0001794 3300046539 Bacteria 5641
150 Ga0495645_0109573 3300046543 Bacteria 1955
151 Ga0495622_0008916 3300046557 Bacteria 4646
152 Ga0495622_0023598 3300046557 Bacteria 2869
153 Ga0495668_0023563 3300046616 Bacteria 3508
154 Ga0495668_0039707 3300046616 Bacteria 2627
155 Ga0495634_0016120 3300046642 Bacteria 5349
156 Ga0495611_0068749 3300046648 Bacteria 1617
157 Ga0495625_0042474 3300046660 Bacteria 3303
158 Ga0495657_0015682 3300046675 Bacteria 5538
159 Ga0495657_0120211 3300046675 Bacteria 1655
160 Ga0495599_0039432 3300046678 Bacteria 2968
161 Ga0495613_0011750 3300046689 Bacteria 6506
162 Ga0495613_0033123 3300046689 Bacteria 3839
163 Ga0495613_0096534 3300046689 Bacteria 2137
164 Ga0495624_0031977 3300046690 Bacteria 3415
165 Ga0495624_0101170 3300046690 Bacteria 1774
166 Ga0495649_0033398 3300046694 Bacteria 2832
167 Ga0495589_0005228 3300046794 Bacteria 6869
168 Ga0495589_0016300 3300046794 Bacteria 3819
169 Ga0495589_0016740 3300046794 Bacteria 3765
170 Ga0495600_0040598 3300046809 Bacteria 3031
171 Ga0495660_0016734 3300046810 Bacteria 4225
172 Ga0495581_0103535 3300047315 Bacteria 1654
173 Ga0495604_0123111 3300047317 Bacteria 1874
174 Ga0495636_0000747 3300047318 Bacteria 11962
175 Ga0495672_0005671 3300047320 Bacteria 9844
176 Ga0495672_0143474 3300047320 Bacteria 1245
177 Ga0495676_0013326 3300047321 Bacteria 7388
178 Ga0495676_0018787 3300047321 Bacteria 6093
179 Ga0495676_0020980 3300047321 Bacteria 5717
180 Ga0495676_0089833 3300047321 Bacteria 2300
181 Ga0495683_0021957 3300047323 Bacteria 3285
182 Ga0495687_008271 3300047443 Bacteria 5982
183 Ga0495685_001854 3300047447 Bacteria 6539
184 Ga0495685_006435 3300047447 Bacteria 3844
185 Ga0495685_020762 3300047447 Bacteria 2258
186 Ga0495673_0003054 3300047469 Bacteria 11252
187 Ga0495686_0116207 3300047472 Bacteria 1599
188 Ga0495602_0158671 3300048088 Bacteria 1769
189 Ga0495614_0012734 3300048089 Bacteria 3690
190 Ga0495614_0032486 3300048089 Bacteria 2246
191 Ga0495626_0005978 3300048091 Bacteria 7002
192 Ga0496100_0025892 3300048903 Bacteria 3591
193 Ga0496101_0204384 3300048904 Bacteria 1528
194 Ga0496104_0058047 3300048907 Bacteria 3663
195 Ga0496105_0092106 3300048908 Bacteria 2503
196 Ga0496106_0036318 3300048909 Bacteria 3686
197 Ga0496108_0014415 3300048911 Bacteria 6454
198 Ga0496109_0053389 3300048912 Bacteria 3685
199 Ga0496111_0027239 3300048914 Bacteria 4042
200 Ga0496112_0057363 3300048915 Bacteria 3834
201 Ga0496114_0071453 3300048917 Bacteria 2917
202 Ga0496115_0234469 3300048918 Bacteria 1513
203 Ga0496121_0019591 3300048924 Bacteria 6757
204 Ga0496126_0081743 3300048929 Bacteria 2855
205 Ga0496126_0388639 3300048929 Bacteria 1134
206 Ga0501033_0196774 3300049570 Bacteria 1441
207 Ga0501034_0027892 3300049571 Bacteria 5742
208 Ga0501036_0042930 3300049572 Bacteria 3828
209 Ga0501036_0334522 3300049572 Bacteria 1265
210 Ga0501037_0106254 3300049573 Bacteria 2023
211 Ga0501038_0000707 3300049574 Bacteria 29779
212 Ga0501039_0486498 3300049575 Bacteria 969
213 Ga0501043_0012718 3300049579 Bacteria 6580
214 Ga0501043_0039226 3300049579 Bacteria 3723
215 Ga0501046_0034988 3300049580 Bacteria 4049
216 Ga0501046_0305645 3300049580 Bacteria 1161
217 Ga0501047_0026193 3300049581 Bacteria 5609
218 Ga0501047_0088894 3300049581 Bacteria 2966
219 Ga0501048_0038675 3300049582 Bacteria 3423
220 Ga0501048_0193637 3300049582 Bacteria 1441
221 Ga0501071_0371501 3300049587 Bacteria 1090
222 Ga0501035_0001754 3300049822 Bacteria 21899
223 Ga0501044_0007529 3300049823 Bacteria 11976
224 Ga0501044_0009166 3300049823 Bacteria 10809
225 Ga0501044_0010698 3300049823 Bacteria 9954
226 Ga0501044_0081335 3300049823 Bacteria 3279
227 nmdc:mga0yw44_147571_c1 3300050492 Bacteria 1532
228 nmdc:mga05p37_20661_c1 3300050507 Bacteria 7967
229 nmdc:mga05p37_292186_c1 3300050507 Bacteria 1940
230 nmdc:mga0qj67_75565_c1 3300050509 Bacteria 2693
231 nmdc:mga06r32_44432_c1 3300050510 Bacteria 4231
232 nmdc:mga08y16_16456_c1 3300050511 Bacteria 7778
233 nmdc:mga08x19_83563_c1 3300050514 Bacteria 2099
234 nmdc:mga0a205_313446_c1 3300050515 Bacteria 1441
235 nmdc:mga0a205_92472_c1 3300050515 Bacteria 2922
236 Ga0500643_002527 3300053087 Bacteria 9364
237 Ga0500643_012932 3300053087 Bacteria 2972
238 Ga0500645_004209 3300053730 Bacteria 5595
239 Ga0466962_0058156 3300061719 Bacteria 1846
240 2616699545 2616644814 Bacteria 11555299
241 2902802847 2902799365 Bacteria 5419524
242 2904621009 2904615490 Bacteria 10047340
243 8056834434 8056829672 Bacteria 9045328
244 Ga0495676_0001143
245 Ga0055540_1003996
246 Ga0068868_100483516
247 Ga0070691_10057719
248 Ga0070668_100436312
249 Ga0070675_100140073
250 Ga0070673_100027970
251 Ga0070673_100108349
252 Ga0070659_100124791
253 Ga0070709_10204633
254 Ga0070714_100044090
255 Ga0070714_100062072
256 Ga0070710_10008009
257 Ga0070701_10111553
258 Ga0070711_100017357
259 Ga0070705_100041848
260 Ga0070708_100019623
261 Ga0070663_100201187
262 Ga0070662_100107852
263 Ga0068867_100151400
264 Ga0070706_100002536
265 Ga0070706_100097793
266 Ga0070707_100005209
267 Ga0070707_100027287
268 Ga0070698_100149605
269 Ga0070699_100002205
270 Ga0070699_100003925
271 Ga0070679_100454639
272 Ga0070684_100210296
273 Ga0070697_100001843
274 Ga0070672_100096250
275 Ga0070686_100296806
276 Ga0070696_100022702
277 Ga0070693_100176857
278 Ga0070665_100011856
279 Ga0070665_100252265
280 Ga0070702_100044524
281 Ga0068852_100208518
282 Ga0068864_100110670
283 Ga0068861_100014048
284 Ga0068863_100100658
285 Ga0068858_100067108
286 Ga0081455_10095036
287 Ga0081540_1000118
288 Ga0081540_1013492
289 Ga0070717_10003186
290 Ga0070717_10464523
291 Ga0075365_10026488
292 Ga0075364_10095462
293 Ga0075432_10030680
294 Ga0070716_100028107
295 Ga0070712_100023510
296 Ga0075428_100027481
297 Ga0075430_100095419
298 Ga0075431_100030123
299 Ga0075433_10005988
300 Ga0111539_10012206
301 Ga0105247_10014354
302 Ga0114129_10065057
303 Ga0114129_10126342
304 Ga0105243_10137030
305 Ga0105243_10414304
306 Ga0105248_10310047
307 Ga0105237_10000896
308 Ga0105237_10088355
309 Ga0105249_10099350
310 Ga0105239_10000962
311 Ga0105246_10008424
312 Ga0157369_10099191
313 Ga0157378_10118867
314 Ga0163162_10442604
315 Ga0157372_10546517
316 Ga0163161_10006998
317 Ga0163161_10070377
318 Ga0206350_11419015
319 Ga0213876_10043500
320 Ga0224712_10023105
321 Ga0209051_1000996
322 Ga0207656_10133061
323 Ga0207710_10013111
324 Ga0207688_10000886
325 Ga0207680_10092281
326 Ga0207647_10054608
327 Ga0207699_10090550
328 Ga0207699_10243857
329 Ga0207645_10042739
330 Ga0207684_10013850
331 Ga0207684_10119102
332 Ga0207693_10003088
333 Ga0207693_10009614
334 Ga0207663_10218242
335 Ga0207660_10502208
336 Ga0207646_10006134
337 Ga0207646_10065402
338 Ga0207681_10233073
339 Ga0207687_10023546
340 Ga0207706_10008921
341 Ga0207709_10118425
342 Ga0207669_10290103
343 Ga0207665_10041997
344 Ga0207689_10015293
345 Ga0207668_10108684
346 Ga0207639_10101553
347 Ga0207678_10008951
348 Ga0207708_10006358
349 Ga0207648_10036466
350 Ga0207675_100010102
351 Ga0207675_100088190
352 Ga0207683_10012497
353 Ga0207698_10184581
354 Ga0268266_10023153
355 Ga0268266_10220765
356 Ga0268264_10479924
357 Ga0307513_10012598
358 Ga0307513_10208618
359 Ga0307516_10014961
360 Ga0307416_100185107
361 Ga0307507_10000005
362 Ga0373932_0017553
363 Ga0395899_0014927
364 Ga0395900_0366938
365 Ga0436365_0502806
366 Ga0466965_0171102
367 Ga0466971_0035088
368 Ga0466967_0020305
369 Ga0495592_0016342
370 Ga0495603_0000401
371 Ga0495603_0015924
372 Ga0495603_0058483
373 Ga0495603_0185688
374 Ga0495629_0022170
375 Ga0495629_0051845
376 Ga0495629_0130225
377 Ga0495651_0106607
378 Ga0495605_0008135
379 Ga0495664_0084805
380 Ga0495585_0026236
381 Ga0495594_0002506
382 Ga0495607_0028046
383 Ga0495606_0045851
384 Ga0495610_0039331
385 Ga0495618_0167596
386 Ga0495628_0059011
387 Ga0495631_0007295
388 Ga0495643_0177133
389 Ga0495648_0046637
390 Ga0495648_0048862
391 Ga0495652_0083204
392 Ga0495621_0001794
393 Ga0495645_0109573
394 Ga0495622_0008916
395 Ga0495622_0023598
396 Ga0495668_0023563
397 Ga0495668_0039707
398 Ga0495634_0016120
399 Ga0495611_0068749
400 Ga0495625_0042474
401 Ga0495657_0015682
402 Ga0495657_0120211
403 Ga0495599_0039432
404 Ga0495613_0011750
405 Ga0495613_0033123
406 Ga0495613_0096534
407 Ga0495624_0031977
408 Ga0495624_0101170
409 Ga0495649_0033398
410 Ga0495589_0005228
411 Ga0495589_0016300
412 Ga0495589_0016740
413 Ga0495600_0040598
414 Ga0495660_0016734
415 Ga0495581_0103535
416 Ga0495604_0123111
417 Ga0495636_0000747
418 Ga0495672_0005671
419 Ga0495672_0143474
420 Ga0495676_0013326
421 Ga0495676_0018787
422 Ga0495676_0020980
423 Ga0495676_0089833
424 Ga0495683_0021957
425 Ga0495687_008271
426 Ga0495685_001854
427 Ga0495685_006435
428 Ga0495685_020762
429 Ga0495673_0003054
430 Ga0495686_0116207
431 Ga0495602_0158671
432 Ga0495614_0012734
433 Ga0495614_0032486
434 Ga0495626_0005978
435 Ga0496100_0025892
436 Ga0496101_0204384
437 Ga0496104_0058047
438 Ga0496105_0092106
439 Ga0496106_0036318
440 Ga0496108_0014415
441 Ga0496109_0053389
442 Ga0496111_0027239
443 Ga0496112_0057363
444 Ga0496114_0071453
445 Ga0496115_0234469
446 Ga0496121_0019591
447 Ga0496126_0081743
448 Ga0496126_0388639
449 Ga0501033_0196774
450 Ga0501034_0027892
451 Ga0501036_0042930
452 Ga0501036_0334522
453 Ga0501037_0106254
454 Ga0501038_0000707
455 Ga0501039_0486498
456 Ga0501043_0012718
457 Ga0501043_0039226
458 Ga0501046_0034988
459 Ga0501046_0305645
460 Ga0501047_0026193
461 Ga0501047_0088894
462 Ga0501048_0038675
463 Ga0501048_0193637
464 Ga0501071_0371501
465 Ga0501035_0001754
466 Ga0501044_0007529
467 Ga0501044_0009166
468 Ga0501044_0010698
469 Ga0501044_0081335
470 nmdc:mga0yw44_147571_c1
471 nmdc:mga05p37_20661_c1
472 nmdc:mga05p37_292186_c1
473 nmdc:mga0qj67_75565_c1
474 nmdc:mga06r32_44432_c1
475 nmdc:mga08y16_16456_c1
476 nmdc:mga08x19_83563_c1
477 nmdc:mga0a205_313446_c1
478 nmdc:mga0a205_92472_c1
479 Ga0500643_002527
480 Ga0500643_012932
481 Ga0500645_004209
482 Ga0466962_0058156
483 2616699545
484 2902802847
485 2904621009
486 8056834434

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04248

NTP_transf_9

Domain of unknown function (DUF427)

38

130

0.98

PF04248

NTP_transf_9

Domain of unknown function (DUF427)

162

250

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3djm-assembly5.cif.gz_E crystal structure of a protein of unknown function from duf427 family (rsph17029_0682) from rhodobacter sphaeroides 2.4.1 at 2.51 a resolution 0.938 27 136
3djm-assembly5.cif.gz_E crystal structure of a protein of unknown function from duf427 family (rsph17029_0682) from rhodobacter sphaeroides 2.4.1 at 2.51 a resolution 0.9219 27 136
7sfz-assembly2.cif.gz_D crystal structure of mis18a-yippee domain 0.6979 159 255
7sfz-assembly3.cif.gz_F crystal structure of mis18a-yippee domain 0.6904 159 254
7sfz-assembly2.cif.gz_D crystal structure of mis18a-yippee domain 0.6727 159 255
ID Description Score Start End Superfamily
3djmD00 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.9369 28 136 2.170.150.40
af_P96817_9_123_2.170.150.40 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.9318 150 254 2.170.150.40
af_O53404_128_241_2.170.150.40 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.9056 149 254 2.170.150.40
3djmD00 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.9044 28 136 2.170.150.40
af_O53404_8_113_2.170.150.40 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.8635 29 130 2.170.150.40
ID Description Score Start End GO Terms
AF-A0A8A8PBA3-F1-model_v4 deleted 0.975 151 255
AF-A0A165QQ61-F1-model_v4 deleted 0.9747 150 255
AF-A0A7X5APM9-F1-model_v4 DUF427 domain-containing protein 0.9732 151 246
AF-A0A4R6WMM6-F1-model_v4 Uncharacterized protein (DUF427 family) 0.9715 150 255
AF-A0A1L3SPG7-F1-model_v4 DUF427 domain-containing protein 0.9713 150 255

Map