F355797

General Info

Members Datasets Scaffolds Average Seq Length
243 172 486 144

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0691024|Ga0436365_0691024_9811_10290
Length 159
Sequence MLGIVIAREATMEVLDRVSAILKQKGDRIWSVGPDATVYEALSIMAGKEVGALLVLDGQKPVGLLSERDYARKIILKGRSSKDTPVSEIMSSPPLTIPPDCSVKEAMQIMTENRVRHLPVLAKDGALVGMLSIGDLVKWIITSQEETIEQLHSYISGRS

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
38 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
99 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
100 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
102 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
103 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
111 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
112 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
113 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
114 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
115 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
116 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
117 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
118 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
119 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
120 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
121 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
122 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
123 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
124 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
125 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
126 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
127 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
128 3300042128 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 Metagenome Rhizosphere
129 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
130 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
131 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
132 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
133 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
134 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
135 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
136 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
137 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
138 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
139 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
140 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
141 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
142 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
143 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
144 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
145 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
146 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
147 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
148 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
149 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
150 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
151 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
152 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
166 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
167 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
170 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
171 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
172 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.77
Metatranscriptomes 0.41
Isolates 0.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.7
Nodule 0
Rhizoplane 4.53
Rhizosphere 86.83
Stem 0
Stem Tuber 0
Unclassified 24.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0691024 3300039437 Bacteria 15107
2 JGI24751J29686_10000973 3300002459 Bacteria 6306
3 Ga0065704_10324369 3300005289 Unclassified 848
4 Ga0065707_10063768 3300005295 Unclassified 679
5 Ga0070658_10579512 3300005327 Unclassified 972
6 Ga0070676_10183219 3300005328 Bacteria 1363
7 Ga0070683_100014808 3300005329 Bacteria 6835
8 Ga0070683_100491544 3300005329 Bacteria 1172
9 Ga0070683_101178469 3300005329 Bacteria 736
10 Ga0070670_100132892 3300005331 Unclassified 2150
11 Ga0070670_100146610 3300005331 Unclassified 2042
12 Ga0070670_100190153 3300005331 Unclassified 1783
13 Ga0070670_100250208 3300005331 Bacteria 1544
14 Ga0070670_100895171 3300005331 Bacteria 804
15 Ga0070682_100007424 3300005337 Bacteria 6183
16 Ga0070682_100168627 3300005337 Unclassified 1519
17 Ga0070682_100187688 3300005337 Bacteria 1449
18 Ga0068868_100160368 3300005338 Bacteria 1857
19 Ga0070660_100033279 3300005339 Bacteria 3885
20 Ga0070661_100220097 3300005344 Bacteria 1456
21 Ga0070669_100291657 3300005353 Unclassified 1310
22 Ga0070675_100894299 3300005354 Bacteria 814
23 Ga0070675_101026701 3300005354 Bacteria 757
24 Ga0070671_100305790 3300005355 Unclassified 1354
25 Ga0070673_102209133 3300005364 Bacteria 523
26 Ga0070688_100026420 3300005365 Bacteria 3449
27 Ga0070667_101957816 3300005367 Unclassified 552
28 Ga0070713_100232797 3300005436 Bacteria 1675
29 Ga0070700_100956281 3300005441 Bacteria 701
30 Ga0070663_101181867 3300005455 Unclassified 671
31 Ga0070685_10403551 3300005466 Bacteria 947
32 Ga0070679_100070978 3300005530 Bacteria 3473
33 Ga0070684_100838150 3300005535 Bacteria 860
34 Ga0070684_100916867 3300005535 Bacteria 821
35 Ga0068853_100146143 3300005539 Unclassified 2125
36 Ga0070693_100129568 3300005547 Bacteria 1575
37 Ga0068855_100028508 3300005563 Bacteria 6678
38 Ga0070664_100408645 3300005564 Bacteria 1242
39 Ga0070664_100660083 3300005564 Bacteria 972
40 Ga0068857_100533345 3300005577 Bacteria 1104
41 Ga0068857_100577224 3300005577 Bacteria 1061
42 Ga0068856_100025052 3300005614 Bacteria 5814
43 Ga0068852_100679094 3300005616 Bacteria 1039
44 Ga0068859_101446901 3300005617 Unclassified 758
45 Ga0068859_101668195 3300005617 Bacteria 704
46 Ga0068859_102118442 3300005617 Bacteria 621
47 Ga0068864_100101105 3300005618 Unclassified 2557
48 Ga0068864_100196776 3300005618 Bacteria 1850
49 Ga0068864_100544073 3300005618 Bacteria 1121
50 Ga0068870_10727166 3300005840 Bacteria 687
51 Ga0068860_102359849 3300005843 Bacteria 552
52 Ga0081455_10008196 3300005937 Bacteria 10894
53 Ga0081538_10203525 3300005981 Unclassified 809
54 Ga0081540_1156270 3300005983 Bacteria 892
55 Ga0081539_10112107 3300005985 Bacteria 1370
56 Ga0070717_10153430 3300006028 Bacteria 1994
57 Ga0075366_10033499 3300006195 Bacteria 3026
58 Ga0075366_10194814 3300006195 Bacteria 1232
59 Ga0075370_10022903 3300006353 Bacteria 3435
60 Ga0068871_101615630 3300006358 Bacteria 614
61 Ga0075429_100003183 3300006880 Bacteria 13955
62 Ga0097620_100321185 3300006931 Bacteria 1642
63 Ga0097620_101446935 3300006931 Unclassified 758
64 Ga0097620_101668325 3300006931 Bacteria 704
65 Ga0097620_102118808 3300006931 Bacteria 621
66 Ga0075435_100921270 3300007076 Unclassified 762
67 Ga0105240_10000321 3300009093 Bacteria 90931
68 Ga0111539_10412627 3300009094 Bacteria 1573
69 Ga0105245_10624710 3300009098 Unclassified 1106
70 Ga0105245_11344312 3300009098 Bacteria 764
71 Ga0105241_10006250 3300009174 Bacteria 8782
72 Ga0105241_10242520 3300009174 Bacteria 1524
73 Ga0105241_10483564 3300009174 Bacteria 1101
74 Ga0105242_10721060 3300009176 Unclassified 978
75 Ga0105242_10775927 3300009176 Unclassified 946
76 Ga0105237_10002934 3300009545 Bacteria 20647
77 Ga0105237_10193988 3300009545 Unclassified 2031
78 Ga0105238_10112306 3300009551 Bacteria 2704
79 Ga0105238_11631183 3300009551 Bacteria 675
80 Ga0105249_10005718 3300009553 Bacteria 10751
81 Ga0105249_13099179 3300009553 Bacteria 534
82 Ga0105249_13432445 3300009553 Unclassified 510
83 Ga0105239_10000813 3300010375 Bacteria 44289
84 Ga0105239_10618665 3300010375 Unclassified 1236
85 Ga0105239_13027365 3300010375 Unclassified 548
86 Ga0157373_10085780 3300013100 Unclassified 2219
87 Ga0157373_10286845 3300013100 Bacteria 1167
88 Ga0157373_10563213 3300013100 Bacteria 827
89 Ga0157371_11146329 3300013102 Bacteria 598
90 Ga0157370_10619919 3300013104 Unclassified 990
91 Ga0157369_10005558 3300013105 Bacteria 14637
92 Ga0157369_10025552 3300013105 Bacteria 6554
93 Ga0157369_10684819 3300013105 Bacteria 1056
94 Ga0157374_10027737 3300013296 Bacteria 5112
95 Ga0157374_10103895 3300013296 Unclassified 2727
96 Ga0157374_10384847 3300013296 Bacteria 1398
97 Ga0157374_10669903 3300013296 Unclassified 1050
98 Ga0157378_10061435 3300013297 Bacteria 3353
99 Ga0157378_10402581 3300013297 Bacteria 1349
100 Ga0163162_10601772 3300013306 Unclassified 1225
101 Ga0163162_11040078 3300013306 Bacteria 927
102 Ga0157372_10101840 3300013307 Unclassified 3279
103 Ga0157372_10406488 3300013307 Bacteria 1586
104 Ga0157372_11298919 3300013307 Bacteria 840
105 Ga0157372_11789857 3300013307 Bacteria 706
106 Ga0157375_10262362 3300013308 Bacteria 1889
107 Ga0157375_10753633 3300013308 Bacteria 1125
108 Ga0157375_10896086 3300013308 Bacteria 1031
109 Ga0157375_11298285 3300013308 Bacteria 856
110 Ga0163163_10321665 3300014325 Unclassified 1601
111 Ga0163163_10356709 3300014325 Bacteria 1518
112 Ga0163163_11078298 3300014325 Bacteria 866
113 Ga0157380_10672016 3300014326 Bacteria 1036
114 Ga0157376_10171484 3300014969 Unclassified 1976
115 Ga0182005_1010208 3300015265 Bacteria 2707
116 Ga0213876_10011952 3300021384 Bacteria 4626
117 Ga0213876_10213803 3300021384 Bacteria 1025
118 Ga0213876_10499692 3300021384 Bacteria 647
119 Ga0213875_10165443 3300021388 Unclassified 1038
120 Ga0207680_10460669 3300025903 Bacteria 903
121 Ga0207705_10861241 3300025909 Unclassified 702
122 Ga0207654_10075552 3300025911 Bacteria 2014
123 Ga0207695_10000197 3300025913 Bacteria 168837
124 Ga0207671_10000516 3300025914 Bacteria 52391
125 Ga0207662_10511005 3300025918 Unclassified 828
126 Ga0207657_10132520 3300025919 Bacteria 2042
127 Ga0207649_10972416 3300025920 Unclassified 667
128 Ga0207652_10265439 3300025921 Bacteria 1548
129 Ga0207650_10049836 3300025925 Bacteria 3094
130 Ga0207650_10156410 3300025925 Unclassified 1803
131 Ga0207650_10709727 3300025925 Bacteria 850
132 Ga0207659_11126246 3300025926 Bacteria 675
133 Ga0207687_10422944 3300025927 Unclassified 1100
134 Ga0207687_10906114 3300025927 Bacteria 754
135 Ga0207664_10451419 3300025929 Bacteria 1147
136 Ga0207644_11379961 3300025931 Bacteria 592
137 Ga0207691_10476355 3300025940 Bacteria 1061
138 Ga0207691_10626159 3300025940 Unclassified 910
139 Ga0207661_10026418 3300025944 Bacteria 4424
140 Ga0207661_10353158 3300025944 Bacteria 1327
141 Ga0207661_11110578 3300025944 Bacteria 728
142 Ga0207679_10423814 3300025945 Bacteria 1175
143 Ga0207679_11268825 3300025945 Bacteria 676
144 Ga0207667_10033221 3300025949 Bacteria 5551
145 Ga0207712_10070316 3300025961 Unclassified 2514
146 Ga0207658_10762545 3300025986 Bacteria 877
147 Ga0207639_10101414 3300026041 Unclassified 2327
148 Ga0207639_10536999 3300026041 Unclassified 1072
149 Ga0207639_11609324 3300026041 Bacteria 609
150 Ga0207678_11151202 3300026067 Unclassified 687
151 Ga0207708_10500536 3300026075 Bacteria 1018
152 Ga0207676_10298572 3300026095 Bacteria 1470
153 Ga0207674_10372922 3300026116 Unclassified 1379
154 Ga0207674_10478986 3300026116 Bacteria 1203
155 Ga0207674_10591342 3300026116 Bacteria 1072
156 Ga0207683_10985398 3300026121 Bacteria 783
157 Ga0207698_10171040 3300026142 Bacteria 1913
158 Ga0207698_10908248 3300026142 Unclassified 888
159 Ga0265323_10043947 3300028653 Bacteria 1611
160 Ga0265323_10251018 3300028653 Bacteria 550
161 Ga0307515_10000001 3300028794 Bacteria 4259510
162 Ga0265760_10001150 3300031090 Bacteria 7704
163 Ga0265330_10098904 3300031235 Bacteria 1250
164 Ga0265327_10001555 3300031251 Bacteria 28194
165 Ga0265327_10006348 3300031251 Bacteria 9485
166 Ga0265316_10002365 3300031344 Bacteria 19646
167 Ga0265316_10045093 3300031344 Bacteria 3503
168 Ga0265316_10418741 3300031344 Bacteria 963
169 Ga0307408_100263337 3300031548 Bacteria 1428
170 Ga0307516_10589230 3300031730 Bacteria 766
171 Ga0307413_10101804 3300031824 Bacteria 1900
172 Ga0307406_11079159 3300031901 Bacteria 692
173 Ga0307407_10303425 3300031903 Bacteria 1114
174 Ga0307416_100027616 3300032002 Bacteria 4206
175 Ga0307415_100013145 3300032126 Bacteria 4821
176 Ga0316574_0380383 3300035398 Bacteria 891
177 Ga0373935_0282559 3300035692 Unclassified 1169
178 Ga0436365_0569322 3300039437 Bacteria 1020
179 Ga0436365_1020916 3300039437 Unclassified 541
180 Ga0436365_1321487 3300039437 Bacteria 32026
181 Ga0436363_0828471 3300039450 Bacteria 4243
182 Ga0439436_0000532 3300041404 Bacteria 9999
183 Ga0439436_0008043 3300041404 Bacteria 3239
184 Ga0439438_019511 3300041405 Bacteria 1915
185 Ga0439447_053517 3300041407 Bacteria 959
186 Ga0451787_712302 3300041441 Unclassified 942
187 Ga0451807_1176791 3300041486 Bacteria 509
188 Ga0451839_1223873 3300041496 Bacteria 673
189 Ga0439431_0007694 3300041997 Bacteria 2406
190 Ga0439442_012562 3300042002 Bacteria 1731
191 Ga0439445_0005107 3300042004 Bacteria 2986
192 Ga0439432_135794 3300042006 Bacteria 724
193 Ga0439452_012354 3300042010 Bacteria 2433
194 Ga0439457_007481 3300042014 Bacteria 2619
195 Ga0439462_0007277 3300042015 Bacteria 2766
196 Ga0450923_000918 3300042125 Bacteria 3631
197 Ga0450897_028539 3300042128 Bacteria 624
198 Ga0450899_005893 3300042135 Bacteria 1321
199 Ga0450910_008791 3300042147 Bacteria 1425
200 Ga0439446_0322702 3300042156 Bacteria 546
201 Ga0450908_008528 3300042184 Bacteria 1920
202 Ga0439434_0027285 3300042435 Bacteria 1726
203 Ga0450918_060304 3300042531 Bacteria 700
204 Ga0451577_0914774 3300042876 Bacteria 790
205 Ga0466966_0419194 3300044684 Unclassified 805
206 Ga0453684_1037015 3300044712 Bacteria 870
207 Ga0466970_0174504 3300044765 Unclassified 1192
208 Ga0495662_0617169 3300046476 Unclassified 530
209 Ga0495606_0106518 3300046507 Bacteria 1697
210 Ga0495642_0173936 3300046528 Bacteria 936
211 Ga0495587_0442230 3300046536 Bacteria 721
212 Ga0495656_0052474 3300046615 Bacteria 1749
213 Ga0495635_0384423 3300046663 Bacteria 934
214 Ga0495649_0320318 3300046694 Unclassified 787
215 Ga0495581_0118516 3300047315 Unclassified 1540
216 Ga0495604_0524631 3300047317 Bacteria 766
217 Ga0495680_0109134 3300047322 Bacteria 2053
218 Ga0495675_0765379 3300047444 Bacteria 537
219 Ga0495686_0063694 3300047472 Bacteria 2284
220 Ga0496102_1125649 3300048905 Bacteria 705
221 Ga0496104_1072060 3300048907 Bacteria 709
222 Ga0496108_0099579 3300048911 Bacteria 2478
223 Ga0496109_0360048 3300048912 Bacteria 1374
224 Ga0496110_0049027 3300048913 Bacteria 3703
225 Ga0496111_0163272 3300048914 Bacteria 1654
226 Ga0496113_0411012 3300048916 Bacteria 1087
227 Ga0496114_0043879 3300048917 Bacteria 3708
228 Ga0496115_0010652 3300048918 Bacteria 6876
229 Ga0501034_0497365 3300049571 Unclassified 1133
230 Ga0501043_0249422 3300049579 Unclassified 1368
231 Ga0501070_0125850 3300049586 Unclassified 2118
232 Ga0501073_0247852 3300049589 Unclassified 1230
233 Ga0501044_0177618 3300049823 Bacteria 2098
234 Ga0501044_0311822 3300049823 Unclassified 1500
235 nmdc:mga03683_72488_c1 3300050489 Bacteria 1149
236 nmdc:mga0k408_20963_c1 3300050493 Bacteria 3668
237 nmdc:mga0k408_281230_c1 3300050493 Bacteria 993
238 nmdc:mga07m45_86834_c1 3300050496 Bacteria 1790
239 nmdc:mga08y16_53410_c1 3300050511 Bacteria 4225
240 Ga0500556_0099035 3300053104 Bacteria 1121
241 Ga0500588_0027958 3300053146 Unclassified 1594
242 2885196832 2885192300 Bacteria 5882526
243 2919440046 2919437846 Bacteria 6199444
244 Ga0436365_0691024
245 JGI24751J29686_10000973
246 Ga0065704_10324369
247 Ga0065707_10063768
248 Ga0070658_10579512
249 Ga0070676_10183219
250 Ga0070683_100014808
251 Ga0070683_100491544
252 Ga0070683_101178469
253 Ga0070670_100132892
254 Ga0070670_100146610
255 Ga0070670_100190153
256 Ga0070670_100250208
257 Ga0070670_100895171
258 Ga0070682_100007424
259 Ga0070682_100168627
260 Ga0070682_100187688
261 Ga0068868_100160368
262 Ga0070660_100033279
263 Ga0070661_100220097
264 Ga0070669_100291657
265 Ga0070675_100894299
266 Ga0070675_101026701
267 Ga0070671_100305790
268 Ga0070673_102209133
269 Ga0070688_100026420
270 Ga0070667_101957816
271 Ga0070713_100232797
272 Ga0070700_100956281
273 Ga0070663_101181867
274 Ga0070685_10403551
275 Ga0070679_100070978
276 Ga0070684_100838150
277 Ga0070684_100916867
278 Ga0068853_100146143
279 Ga0070693_100129568
280 Ga0068855_100028508
281 Ga0070664_100408645
282 Ga0070664_100660083
283 Ga0068857_100533345
284 Ga0068857_100577224
285 Ga0068856_100025052
286 Ga0068852_100679094
287 Ga0068859_101446901
288 Ga0068859_101668195
289 Ga0068859_102118442
290 Ga0068864_100101105
291 Ga0068864_100196776
292 Ga0068864_100544073
293 Ga0068870_10727166
294 Ga0068860_102359849
295 Ga0081455_10008196
296 Ga0081538_10203525
297 Ga0081540_1156270
298 Ga0081539_10112107
299 Ga0070717_10153430
300 Ga0075366_10033499
301 Ga0075366_10194814
302 Ga0075370_10022903
303 Ga0068871_101615630
304 Ga0075429_100003183
305 Ga0097620_100321185
306 Ga0097620_101446935
307 Ga0097620_101668325
308 Ga0097620_102118808
309 Ga0075435_100921270
310 Ga0105240_10000321
311 Ga0111539_10412627
312 Ga0105245_10624710
313 Ga0105245_11344312
314 Ga0105241_10006250
315 Ga0105241_10242520
316 Ga0105241_10483564
317 Ga0105242_10721060
318 Ga0105242_10775927
319 Ga0105237_10002934
320 Ga0105237_10193988
321 Ga0105238_10112306
322 Ga0105238_11631183
323 Ga0105249_10005718
324 Ga0105249_13099179
325 Ga0105249_13432445
326 Ga0105239_10000813
327 Ga0105239_10618665
328 Ga0105239_13027365
329 Ga0157373_10085780
330 Ga0157373_10286845
331 Ga0157373_10563213
332 Ga0157371_11146329
333 Ga0157370_10619919
334 Ga0157369_10005558
335 Ga0157369_10025552
336 Ga0157369_10684819
337 Ga0157374_10027737
338 Ga0157374_10103895
339 Ga0157374_10384847
340 Ga0157374_10669903
341 Ga0157378_10061435
342 Ga0157378_10402581
343 Ga0163162_10601772
344 Ga0163162_11040078
345 Ga0157372_10101840
346 Ga0157372_10406488
347 Ga0157372_11298919
348 Ga0157372_11789857
349 Ga0157375_10262362
350 Ga0157375_10753633
351 Ga0157375_10896086
352 Ga0157375_11298285
353 Ga0163163_10321665
354 Ga0163163_10356709
355 Ga0163163_11078298
356 Ga0157380_10672016
357 Ga0157376_10171484
358 Ga0182005_1010208
359 Ga0213876_10011952
360 Ga0213876_10213803
361 Ga0213876_10499692
362 Ga0213875_10165443
363 Ga0207680_10460669
364 Ga0207705_10861241
365 Ga0207654_10075552
366 Ga0207695_10000197
367 Ga0207671_10000516
368 Ga0207662_10511005
369 Ga0207657_10132520
370 Ga0207649_10972416
371 Ga0207652_10265439
372 Ga0207650_10049836
373 Ga0207650_10156410
374 Ga0207650_10709727
375 Ga0207659_11126246
376 Ga0207687_10422944
377 Ga0207687_10906114
378 Ga0207664_10451419
379 Ga0207644_11379961
380 Ga0207691_10476355
381 Ga0207691_10626159
382 Ga0207661_10026418
383 Ga0207661_10353158
384 Ga0207661_11110578
385 Ga0207679_10423814
386 Ga0207679_11268825
387 Ga0207667_10033221
388 Ga0207712_10070316
389 Ga0207658_10762545
390 Ga0207639_10101414
391 Ga0207639_10536999
392 Ga0207639_11609324
393 Ga0207678_11151202
394 Ga0207708_10500536
395 Ga0207676_10298572
396 Ga0207674_10372922
397 Ga0207674_10478986
398 Ga0207674_10591342
399 Ga0207683_10985398
400 Ga0207698_10171040
401 Ga0207698_10908248
402 Ga0265323_10043947
403 Ga0265323_10251018
404 Ga0307515_10000001
405 Ga0265760_10001150
406 Ga0265330_10098904
407 Ga0265327_10001555
408 Ga0265327_10006348
409 Ga0265316_10002365
410 Ga0265316_10045093
411 Ga0265316_10418741
412 Ga0307408_100263337
413 Ga0307516_10589230
414 Ga0307413_10101804
415 Ga0307406_11079159
416 Ga0307407_10303425
417 Ga0307416_100027616
418 Ga0307415_100013145
419 Ga0316574_0380383
420 Ga0373935_0282559
421 Ga0436365_0569322
422 Ga0436365_1020916
423 Ga0436365_1321487
424 Ga0436363_0828471
425 Ga0439436_0000532
426 Ga0439436_0008043
427 Ga0439438_019511
428 Ga0439447_053517
429 Ga0451787_712302
430 Ga0451807_1176791
431 Ga0451839_1223873
432 Ga0439431_0007694
433 Ga0439442_012562
434 Ga0439445_0005107
435 Ga0439432_135794
436 Ga0439452_012354
437 Ga0439457_007481
438 Ga0439462_0007277
439 Ga0450923_000918
440 Ga0450897_028539
441 Ga0450899_005893
442 Ga0450910_008791
443 Ga0439446_0322702
444 Ga0450908_008528
445 Ga0439434_0027285
446 Ga0450918_060304
447 Ga0451577_0914774
448 Ga0466966_0419194
449 Ga0453684_1037015
450 Ga0466970_0174504
451 Ga0495662_0617169
452 Ga0495606_0106518
453 Ga0495642_0173936
454 Ga0495587_0442230
455 Ga0495656_0052474
456 Ga0495635_0384423
457 Ga0495649_0320318
458 Ga0495581_0118516
459 Ga0495604_0524631
460 Ga0495680_0109134
461 Ga0495675_0765379
462 Ga0495686_0063694
463 Ga0496102_1125649
464 Ga0496104_1072060
465 Ga0496108_0099579
466 Ga0496109_0360048
467 Ga0496110_0049027
468 Ga0496111_0163272
469 Ga0496113_0411012
470 Ga0496114_0043879
471 Ga0496115_0010652
472 Ga0501034_0497365
473 Ga0501043_0249422
474 Ga0501070_0125850
475 Ga0501073_0247852
476 Ga0501044_0177618
477 Ga0501044_0311822
478 nmdc:mga03683_72488_c1
479 nmdc:mga0k408_20963_c1
480 nmdc:mga0k408_281230_c1
481 nmdc:mga07m45_86834_c1
482 nmdc:mga08y16_53410_c1
483 Ga0500556_0099035
484 Ga0500588_0027958
485 2885196832
486 2919440046

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00571

CBS

CBS domain

86

142

0.97

PF00571

CBS

CBS domain

25

76

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ghd-assembly1.cif.gz_A crystal structure of a cystathionine beta-synthase domain protein fused to a zn-ribbon-like domain 0.9502 12 77
4fry-assembly1.cif.gz_A the structure of a putative signal-transduction protein with cbs domains from burkholderia ambifaria mc40-6 0.9463 2 127
2rc3-assembly2.cif.gz_B crystal structure of cbs domain, ne2398 0.9462 2 124
3fhm-assembly2.cif.gz_C crystal structure of the cbs-domain containing protein atu1752 from agrobacterium tumefaciens 0.9378 2 121
3fhm-assembly2.cif.gz_B crystal structure of the cbs-domain containing protein atu1752 from agrobacterium tumefaciens 0.9358 2 123
ID Description Score Start End Superfamily
af_O13965_237_391_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9576 2 123 3.10.580.10
af_P71737_1_141_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9515 2 140 3.10.580.10
4fryA00 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9463 2 127 3.10.580.10
af_A0A1D6Q1S7_52_188_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9425 2 121 3.10.580.10
af_K7KHU5_50_204_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.941 2 139 3.10.580.10
ID Description Score Start End GO Terms
AF-A0A845JRS1-F1-model_v4 CBS domain-containing protein 0.9804 12 126
AF-A0A1V4XYD5-F1-model_v4 Hypoxic response protein 1 0.9787 2 139
AF-A0A2H0MMD1-F1-model_v4 Histidine kinase 0.9776 13 121 GO:0016301
AF-A0A3D2UWB4-F1-model_v4 CBS domain-containing protein 0.9764 13 118
AF-T0MUB4-F1-model_v4 CBS domain-containing protein 0.9759 11 121

Map