F355260

General Info

Members Datasets Scaffolds Average Seq Length
243 175 183 350

Family's Representative Sequence

Representative Sequence 3300005288|Ga0065714_10078352|Ga0065714_100783523
Length 364
Sequence MEMGVPLPMDNSFYMSVKIKTVAKSLPGYSRTTAEILPFLDAWLSGQEDRFIRKVKKIFENAMVDQRYSIMSPEEVFSKLSFEERNDIYIRESIKLGTSCLKLALAQASWKGEDLDYIITVSCTGMMIPSMDAYIINNLKLRQDIVRLPVTEMGCAAGISGIIYAKNFLQANPGKRAAVIAVESPTATFQLNDFSMANIVSAAIFGDGAACVLLSSDESDEGPEIIGEEMYHFYDAEQLMGFQLKNAGLTMVLDVGVPEQIEQHFPQIIHPFLAKHGLNISEIDHLIFHPGGKKIIQVVEELFGKLGKNIDDTKEVLRLYGNMSSATVLYVLARFLDLPQKKGDLGLMLSFGPGFSAQRILLKW

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
3 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
4 2523533629 Kaistella palustris DSM 21579 Isolate Rhizosphere
5 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
6 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
7 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
8 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
9 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
10 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
11 2738541283 Pedobacter sp. OK701 Isolate Unclassified
12 2738541284 Pedobacter sp. YR016 Isolate Unclassified
13 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
14 2738541302 Pedobacter sp. CF074 Isolate Unclassified
15 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
16 2738543023 Pedobacter sp. OK628 Isolate Unclassified
17 2739367651 Pedobacter sp. OK291 Isolate Unclassified
18 2739367656 Pedobacter sp. CF523 Isolate Unclassified
19 2739367663 Pedobacter sp. YR510 Isolate Unclassified
20 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
21 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
22 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
23 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
24 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
25 2818991437 Pedobacter terrae 518 Isolate Unclassified
26 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
27 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
28 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
29 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
30 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
31 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
32 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
33 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
34 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
35 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
36 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
37 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
38 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
39 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
40 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
41 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
42 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
43 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
44 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
45 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
46 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
47 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
48 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
49 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
50 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
51 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
52 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
53 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
54 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
55 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
56 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
57 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
58 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
59 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
60 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
61 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
62 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
63 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
64 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
65 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
66 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
67 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
68 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
69 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
70 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
71 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
72 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
73 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
74 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
75 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
76 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
77 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
78 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
79 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
80 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
81 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
82 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
83 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
84 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
85 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
86 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
87 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
88 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
89 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
90 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
91 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
92 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
93 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
94 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
95 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
96 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
97 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
98 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
99 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
100 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
101 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
102 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
105 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
106 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
114 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
117 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
118 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
119 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
120 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
121 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
122 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
123 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
124 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
125 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
126 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
127 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
128 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
129 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
130 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
131 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
132 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
133 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
134 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
135 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
138 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
139 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
142 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
152 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
153 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
154 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
155 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
156 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
161 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
162 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
163 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
164 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
165 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
166 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
167 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
168 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
169 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
170 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
171 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
172 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
173 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
174 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
175 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.9
Metatranscriptomes 0.41
Isolates 24.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.52
Nodule 1.65
Rhizoplane 0
Rhizosphere 62.55
Stem 0
Stem Tuber 0
Unclassified 24.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1463173 2162886007 Bacteria 8874
2 rootH2_10068214 3300003320 Bacteria 5571
3 rootL2_10025817 3300003322 Bacteria 2858
4 rootH1_10012117 3300003323 Bacteria 7591
5 rootH1_10039234 3300003323 Bacteria 22899
6 rootH1_10264317 3300003323 Bacteria 3737
7 Ga0055535_1005324 3300003761 Bacteria 2854
8 Ga0055542_1004070 3300003762 Bacteria 3689
9 Ga0055531_10000036 3300003794 Bacteria 147042
10 Ga0058860_12158638 3300004801 Bacteria 1957
11 Ga0065165_1012434 3300005262 Bacteria 3465
12 Ga0065714_10002785 3300005288 Bacteria 18311
13 Ga0065714_10004194 3300005288 Bacteria 5546
14 Ga0065714_10006788 3300005288 Bacteria 3269
15 Ga0065714_10010944 3300005288 Bacteria 3161
16 Ga0065714_10014476 3300005288 Bacteria 2415
17 Ga0065714_10064543 3300005288 Bacteria 39067
18 Ga0065714_10078352 3300005288 Bacteria 2606
19 Ga0065714_10079075 3300005288 Bacteria 2545
20 Ga0065714_10101554 3300005288 Bacteria 1640
21 Ga0065714_10114329 3300005288 Bacteria 1430
22 Ga0065704_10000251 3300005289 Bacteria 69899
23 Ga0065715_10191529 3300005293 Bacteria 1412
24 Ga0070689_100048072 3300005340 Bacteria 3290
25 Ga0070669_100063937 3300005353 Bacteria 2709
26 Ga0070688_100037815 3300005365 Bacteria 2943
27 Ga0070708_100409334 3300005445 Unclassified 1279
28 Ga0068853_100273155 3300005539 Bacteria 1557
29 Ga0068861_100240618 3300005719 Bacteria 1539
30 Ga0068858_100038447 3300005842 Bacteria 4439
31 Ga0068860_100091392 3300005843 Bacteria 2900
32 Ga0081539_10000565 3300005985 Bacteria 76499
33 Ga0099824_1002241 3300006942 Bacteria 28219
34 Ga0079104_1000139 3300006946 Bacteria 102950
35 Ga0105244_10039420 3300009036 Bacteria 2459
36 Ga0111539_10099853 3300009094 Bacteria 3408
37 Ga0105247_10035811 3300009101 Bacteria 3026
38 Ga0114129_10462038 3300009147 Unclassified 1663
39 Ga0105243_10000004 3300009148 Bacteria 601266
40 Ga0105249_10013240 3300009553 Bacteria 7279
41 Ga0105239_10034380 3300010375 Bacteria 5566
42 Ga0105239_10448261 3300010375 Bacteria 1464
43 Ga0157373_10000010 3300013100 Bacteria 195861
44 Ga0157373_10000296 3300013100 Bacteria 40219
45 Ga0157373_10009418 3300013100 Bacteria 7213
46 Ga0157373_10028711 3300013100 Bacteria 4012
47 Ga0157371_10000041 3300013102 Bacteria 203957
48 Ga0157371_10000697 3300013102 Bacteria 39526
49 Ga0157371_10001043 3300013102 Bacteria 30400
50 Ga0157371_10003609 3300013102 Bacteria 13945
51 Ga0157370_10000043 3300013104 Bacteria 132770
52 Ga0157370_10000195 3300013104 Bacteria 76072
53 Ga0157370_10000326 3300013104 Bacteria 59716
54 Ga0157370_10000412 3300013104 Bacteria 53974
55 Ga0157370_10000724 3300013104 Bacteria 41344
56 Ga0157370_10001249 3300013104 Bacteria 31757
57 Ga0157370_10020411 3300013104 Bacteria 6617
58 Ga0157370_10045422 3300013104 Bacteria 4214
59 Ga0157370_10049240 3300013104 Bacteria 4033
60 Ga0157369_10000016 3300013105 Bacteria 257827
61 Ga0157369_10001214 3300013105 Bacteria 32084
62 Ga0163162_10000813 3300013306 Bacteria 28949
63 Ga0163162_10052413 3300013306 Bacteria 4098
64 Ga0163163_10070738 3300014325 Bacteria 3475
65 Ga0157380_10034227 3300014326 Bacteria 3918
66 Ga0182008_10000010 3300014497 Bacteria 301527
67 Ga0182008_10000193 3300014497 Bacteria 48215
68 Ga0182008_10001909 3300014497 Bacteria 13488
69 Ga0182008_10114942 3300014497 Bacteria 1335
70 Ga0182006_1000122 3300015261 Bacteria 83269
71 Ga0182006_1000239 3300015261 Bacteria 51541
72 Ga0182006_1001062 3300015261 Bacteria 17672
73 Ga0182006_1003918 3300015261 Bacteria 7454
74 Ga0182007_10000002 3300015262 Bacteria 564661
75 Ga0182005_1000387 3300015265 Bacteria 24061
76 Ga0183373_1004 3300015682 Bacteria 537398
77 Ga0163161_10000026 3300017792 Bacteria 199745
78 Ga0163161_10000593 3300017792 Bacteria 29004
79 Ga0163161_10000843 3300017792 Bacteria 23929
80 Ga0163161_10001989 3300017792 Bacteria 14820
81 Ga0163161_10010613 3300017792 Bacteria 6377
82 Ga0163161_10088943 3300017792 Unclassified 2283
83 Ga0209436_100629 3300025208 Bacteria 15064
84 Ga0209436_113047 3300025208 Bacteria 1378
85 Ga0209258_100036 3300025242 Bacteria 428859
86 Ga0209148_1000139 3300025254 Bacteria 167011
87 Ga0209130_1002692 3300025284 Bacteria 8462
88 Ga0207426_1000139 3300025302 Bacteria 195835
89 Ga0207426_1005945 3300025302 Bacteria 5417
90 Ga0209257_1000008 3300025304 Bacteria 1294570
91 Ga0207681_10117056 3300025923 Bacteria 1948
92 Ga0207709_10000010 3300025935 Bacteria 601305
93 Ga0207703_10030750 3300026035 Bacteria 4243
94 Ga0207639_10170037 3300026041 Bacteria 1845
95 Ga0207708_10005054 3300026075 Bacteria 9733
96 Ga0207675_100013909 3300026118 Bacteria 7503
97 Ga0209281_1000351 3300027111 Bacteria 75878
98 Ga0209489_115367 3300027361 Bacteria 4739
99 Ga0307515_10070512 3300028794 Bacteria 4755
100 Ga0307515_10084207 3300028794 Bacteria 4087
101 Ga0316181_1086010 3300030744 Bacteria 2921
102 Ga0307408_100007659 3300031548 Bacteria 7142
103 Ga0316576_10111805 3300031727 Bacteria 2048
104 Ga0307405_10000006 3300031731 Bacteria 361477
105 Ga0307413_10000748 3300031824 Bacteria 11212
106 Ga0307410_10000028 3300031852 Bacteria 50901
107 Ga0307406_10000153 3300031901 Bacteria 41029
108 Ga0307407_10000003 3300031903 Bacteria 271723
109 Ga0307407_10002126 3300031903 Bacteria 7613
110 Ga0307412_10000009 3300031911 Bacteria 445987
111 Ga0307412_10048070 3300031911 Bacteria 2804
112 Ga0307416_100000002 3300032002 Bacteria 509907
113 Ga0307416_100003116 3300032002 Bacteria 9710
114 Ga0307414_10000002 3300032004 Bacteria 623006
115 Ga0307414_10003336 3300032004 Bacteria 8575
116 Ga0307414_10004727 3300032004 Bacteria 7430
117 Ga0307414_10009544 3300032004 Bacteria 5581
118 Ga0307414_10020320 3300032004 Bacteria 4137
119 Ga0307414_10054390 3300032004 Bacteria 2797
120 Ga0307414_10095940 3300032004 Bacteria 2218
121 Ga0307414_10149197 3300032004 Bacteria 1842
122 Ga0307414_10185008 3300032004 Bacteria 1679
123 Ga0307411_10000001 3300032005 Bacteria 931810
124 Ga0307510_10125151 3300033180 Bacteria 2262
125 Ga0316584_0061639 3300036712 Bacteria 2809
126 Ga0439466_0000701 3300041411 Bacteria 12658
127 Ga0451837_1362693 3300041494 Bacteria 1546
128 Ga0439431_0049717 3300041997 Bacteria 1085
129 Ga0453684_0023869 3300044712 Bacteria 8975
130 Ga0466959_0008205 3300045049 Bacteria 7371
131 Ga0495627_048116 3300046453 Bacteria 1291
132 Ga0495606_0016597 3300046507 Bacteria 5606
133 Ga0495606_0083829 3300046507 Bacteria 1975
134 Ga0495610_0000240 3300046512 Bacteria 57720
135 Ga0495610_0000294 3300046512 Bacteria 52522
136 Ga0495643_0000970 3300046522 Bacteria 29411
137 Ga0495633_0000405 3300046558 Bacteria 44904
138 Ga0495668_0000791 3300046616 Bacteria 36639
139 Ga0495625_0026507 3300046660 Bacteria 4380
140 Ga0495681_0043407 3300047470 Bacteria 2168
141 Ga0495686_0000268 3300047472 Bacteria 93255
142 Ga0496116_0000079 3300048919 Bacteria 226744
143 Ga0496116_0001485 3300048919 Bacteria 26153
144 Ga0496117_0010007 3300048920 Bacteria 8712
145 Ga0496117_0054799 3300048920 Bacteria 2791
146 Ga0496121_0000007 3300048924 Bacteria 942516
147 Ga0496121_0017736 3300048924 Bacteria 7243
148 Ga0496122_0002827 3300048925 Bacteria 23787
149 Ga0496122_0007461 3300048925 Bacteria 12142
150 Ga0496123_0004372 3300048926 Bacteria 14920
151 Ga0496123_0015929 3300048926 Bacteria 6134
152 Ga0496125_0000142 3300048928 Bacteria 157997
153 Ga0496125_0073195 3300048928 Bacteria 2666
154 Ga0496126_0007154 3300048929 Bacteria 12286
155 Ga0496126_0142566 3300048929 Bacteria 2061
156 Ga0501238_000148 3300049671 Bacteria 10810
157 Ga0501249_000004 3300049679 Bacteria 226777
158 Ga0501249_001841 3300049679 Bacteria 4317
159 Ga0501241_000162 3300049758 Bacteria 14945
160 Ga0501266_000014 3300049763 Bacteria 181600
161 Ga0501269_001588 3300049766 Bacteria 2929
162 Ga0501269_002636 3300049766 Bacteria 2193
163 Ga0501280_001772 3300049776 Bacteria 3786
164 Ga0501280_007951 3300049776 Bacteria 1480
165 Ga0501035_0015298 3300049822 Bacteria 7080
166 nmdc:mga05p37_440166_c1 3300050507 Bacteria 1512
167 nmdc:mga08y16_292314_c1 3300050511 Unclassified 1680
168 Ga0500644_0000422 3300053088 Bacteria 19880
169 Ga0500651_0000528 3300053093 Bacteria 19528
170 Ga0500641_0000007 3300053096 Bacteria 206510
171 Ga0500641_0000051 3300053096 Bacteria 53081
172 Ga0500641_0000366 3300053096 Bacteria 16777
173 Ga0500569_000948 3300053109 Bacteria 5217
174 Ga0500594_0070631 3300053118 Bacteria 1026
175 Ga0500607_119019 3300053121 Bacteria 1281
176 Ga0500658_0000003 3300053134 Bacteria 512506
177 Ga0500658_0001255 3300053134 Bacteria 10274
178 Ga0500559_0021139 3300053136 Bacteria 2756
179 Ga0500577_0000636 3300053142 Bacteria 9000
180 Ga0500616_0006054 3300053153 Bacteria 8026
181 Ga0500622_0000305 3300053156 Bacteria 50294
182 Ga0500627_0008971 3300053158 Unclassified 3579
183 Ga0500584_034532 3300053726 Bacteria 2340

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046453 Ga0495627_048116 Ga0495627_048116_10_894 294
2 3300053118 Ga0500594_0070631 Ga0500594_0070631_21_908 295
3 3300015261 Ga0182006_1000122 Ga0182006_100012252 316
4 3300046558 Ga0495633_0000405 Ga0495633_0000405_20342_21436 316
5 3300032004 Ga0307414_10095940 Ga0307414_100959402 319
6 3300005288 Ga0065714_10004194 Ga0065714_100041945 321
7 3300041997 Ga0439431_0049717 Ga0439431_0049717_36_1022 328
8 3300048924 Ga0496121_0017736 Ga0496121_0017736_4255_5343 337
9 3300006946 Ga0079104_1000139 Ga0079104_100013940 338
10 3300027111 Ga0209281_1000351 Ga0209281_100035136 338
11 3300005288 Ga0065714_10006788 Ga0065714_100067883 339
12 3300031824 Ga0307413_10000748 Ga0307413_1000074810 339
13 3300049763 Ga0501266_000014 Ga0501266_000014_10227_11279 339
14 3300005985 Ga0081539_10000565 Ga0081539_100005658 340
15 3300006942 Ga0099824_1002241 Ga0099824_10022414 340
16 3300013104 Ga0157370_10049240 Ga0157370_100492402 340
17 3300027361 Ga0209489_115367 Ga0209489_1153674 340
18 3300032002 Ga0307416_100003116 Ga0307416_1000031166 340
19 3300053134 Ga0500658_0000003 Ga0500658_0000003_400186_401238 340
20 3300005445 Ga0070708_100409334 Ga0070708_1004093341 341
21 3300004801 Ga0058860_12158638 Ga0058860_121586382 342
22 3300005340 Ga0070689_100048072 Ga0070689_1000480724 342
23 3300005365 Ga0070688_100037815 Ga0070688_1000378153 342
24 3300005719 Ga0068861_100240618 Ga0068861_1002406182 342
25 3300005842 Ga0068858_100038447 Ga0068858_1000384472 342
26 3300005843 Ga0068860_100091392 Ga0068860_1000913922 342
27 3300009101 Ga0105247_10035811 Ga0105247_100358114 342
28 3300009553 Ga0105249_10013240 Ga0105249_100132406 342
29 3300014325 Ga0163163_10070738 Ga0163163_100707384 342
30 3300014326 Ga0157380_10034227 Ga0157380_100342273 342
31 3300017792 Ga0163161_10088943 Ga0163161_100889431 342
32 3300026035 Ga0207703_10030750 Ga0207703_100307504 342
33 3300026075 Ga0207708_10005054 Ga0207708_100050548 342
34 3300026118 Ga0207675_100013909 Ga0207675_1000139092 342
35 3300050511 nmdc:mga08y16_292314_c1 nmdc:mga08y16_292314_c1_361_1413 342
36 iso_pu_bacteria 2519899754 2520882453 346
37 iso_pu_bacteria 2523533629 2524005958 346
38 iso_pu_bacteria 2585427687 2586207754 346
39 iso_pu_bacteria 2738541279 2738732238 346
40 iso_pu_bacteria 2738541283 2738757606 346
41 iso_pu_bacteria 2738541284 2738760698 346
42 iso_pu_bacteria 2738541285 2738764803 346
43 iso_pu_bacteria 2738541302 2738854451 346
44 iso_pu_bacteria 2738543007 2739213818 346
45 iso_pu_bacteria 2739367651 2739588010 346
46 iso_pu_bacteria 2739367663 2739646919 346
47 iso_pu_bacteria 2739367857 2740001956 346
48 iso_pu_bacteria 2739367858 2740006772 346
49 iso_pu_bacteria 2775506987 2776612901 346
50 iso_pu_bacteria 2818991437 2819545887 346
51 iso_pu_bacteria 2818991460 2819679093 346
52 iso_pu_bacteria 2821136567 2821139257 346
53 iso_pu_bacteria 2842722452 2842724211 346
54 iso_pu_bacteria 2842909656 2842913653 346
55 iso_pu_bacteria 2849281842 2849282523 346
56 iso_pu_bacteria 2852627209 2852627498 346
57 iso_pu_bacteria 2857613821 2857617444 346
58 iso_pu_bacteria 2857618242 2857618858 346
59 iso_pu_bacteria 2857627736 2857631729 346
60 iso_pu_bacteria 2881359912 2881361905 346
61 iso_pu_bacteria 2884791551 2884795266 346
62 iso_pu_bacteria 2903895155 2903897615 346
63 iso_pu_bacteria 2904419702 2904420641 346
64 iso_pu_bacteria 2904445276 2904449125 346
65 iso_pu_bacteria 2904467357 2904473178 346
66 iso_pu_bacteria 2904555929 2904560036 346
67 iso_pu_bacteria 2904780799 2904781530 346
68 iso_pu_bacteria 2919177583 2919177758 346
69 iso_pu_bacteria 2919186247 2919187675 346
70 iso_pu_bacteria 2919509842 2919511279 346
71 iso_pu_bacteria 2919683626 2919686699 346
72 iso_pu_bacteria 2929150217 2929152317 346
73 iso_pu_bacteria 2929177148 2929181812 346
74 iso_pu_bacteria 2929239360 2929244179 346
75 iso_pu_bacteria 2939664404 2939665059 346
76 iso_pu_bacteria 2945977869 2945984209 346
77 iso_pu_bacteria 2945997725 2945998965 346
78 iso_pu_bacteria 2946013367 2946016397 346
79 iso_pu_bacteria 2954016120 2954021417 346
80 iso_pu_bacteria 8055419101 8055423742 346
81 iso_pu_bacteria 8055592153 8055592843 346
82 3300009094 Ga0111539_10099853 Ga0111539_100998532 348
83 3300009147 Ga0114129_10462038 Ga0114129_104620382 348
84 3300050507 nmdc:mga05p37_440166_c1 nmdc:mga05p37_440166_c1_103_1155 348
85 3300032004 Ga0307414_10054390 Ga0307414_100543903 349
86 3300044712 Ga0453684_0023869 Ga0453684_0023869_13_1065 349
87 2162886007 SwRhRL2b_contig_1463173 SwRhRL2b_0051.00003840 350
88 3300003320 rootH2_10068214 rootH2_100682146 350
89 3300003322 rootL2_10025817 rootL2_100258173 350
90 3300003323 rootH1_10012117 rootH1_100121178 350
91 3300003323 rootH1_10039234 rootH1_1003923417 350
92 3300003323 rootH1_10264317 rootH1_102643172 350
93 3300003761 Ga0055535_1005324 Ga0055535_10053242 350
94 3300003762 Ga0055542_1004070 Ga0055542_10040704 350
95 3300003794 Ga0055531_10000036 Ga0055531_10000036111 350
96 3300005262 Ga0065165_1012434 Ga0065165_10124343 350
97 3300005288 Ga0065714_10002785 Ga0065714_1000278518 350
98 3300005288 Ga0065714_10010944 Ga0065714_100109441 350
99 3300005288 Ga0065714_10014476 Ga0065714_100144763 350
100 3300005288 Ga0065714_10064543 Ga0065714_1006454337 350
101 3300005288 Ga0065714_10078352 Ga0065714_100783523 350
102 3300005288 Ga0065714_10079075 Ga0065714_100790753 350
103 3300005288 Ga0065714_10101554 Ga0065714_101015542 350
104 3300005288 Ga0065714_10114329 Ga0065714_101143291 350
105 3300005289 Ga0065704_10000251 Ga0065704_1000025157 350
106 3300005293 Ga0065715_10191529 Ga0065715_101915291 350
107 3300005353 Ga0070669_100063937 Ga0070669_1000639372 350
108 3300005539 Ga0068853_100273155 Ga0068853_1002731552 350
109 3300009036 Ga0105244_10039420 Ga0105244_100394203 350
110 3300009148 Ga0105243_10000004 Ga0105243_10000004423 350
111 3300010375 Ga0105239_10034380 Ga0105239_100343805 350
112 3300010375 Ga0105239_10448261 Ga0105239_104482612 350
113 3300013100 Ga0157373_10000010 Ga0157373_1000001013 350
114 3300013100 Ga0157373_10000296 Ga0157373_1000029628 350
115 3300013100 Ga0157373_10009418 Ga0157373_100094187 350
116 3300013100 Ga0157373_10028711 Ga0157373_100287112 350
117 3300013102 Ga0157371_10000041 Ga0157371_1000004159 350
118 3300013102 Ga0157371_10000697 Ga0157371_1000069716 350
119 3300013102 Ga0157371_10001043 Ga0157371_1000104319 350
120 3300013102 Ga0157371_10003609 Ga0157371_1000360911 350
121 3300013104 Ga0157370_10000043 Ga0157370_1000004341 350
122 3300013104 Ga0157370_10000195 Ga0157370_100001958 350
123 3300013104 Ga0157370_10000326 Ga0157370_100003267 350
124 3300013104 Ga0157370_10000412 Ga0157370_1000041227 350
125 3300013104 Ga0157370_10000724 Ga0157370_1000072414 350
126 3300013104 Ga0157370_10001249 Ga0157370_1000124922 350
127 3300013104 Ga0157370_10020411 Ga0157370_100204115 350
128 3300013104 Ga0157370_10045422 Ga0157370_100454225 350
129 3300013105 Ga0157369_10000016 Ga0157369_10000016171 350
130 3300013105 Ga0157369_10001214 Ga0157369_1000121418 350
131 3300013306 Ga0163162_10000813 Ga0163162_100008135 350
132 3300013306 Ga0163162_10052413 Ga0163162_100524136 350
133 3300014497 Ga0182008_10000010 Ga0182008_1000001019 350
134 3300014497 Ga0182008_10000193 Ga0182008_1000019320 350
135 3300014497 Ga0182008_10001909 Ga0182008_100019096 350
136 3300014497 Ga0182008_10114942 Ga0182008_101149422 350
137 3300015261 Ga0182006_1000239 Ga0182006_100023915 350
138 3300015261 Ga0182006_1001062 Ga0182006_100106213 350
139 3300015261 Ga0182006_1003918 Ga0182006_10039183 350
140 3300015262 Ga0182007_10000002 Ga0182007_10000002369 350
141 3300015265 Ga0182005_1000387 Ga0182005_100038710 350
142 3300015682 Ga0183373_1004 Ga0183373_1004116 350
143 3300017792 Ga0163161_10000026 Ga0163161_10000026163 350
144 3300017792 Ga0163161_10000593 Ga0163161_1000059319 350
145 3300017792 Ga0163161_10000843 Ga0163161_100008432 350
146 3300017792 Ga0163161_10001989 Ga0163161_100019893 350
147 3300017792 Ga0163161_10010613 Ga0163161_100106136 350
148 3300025208 Ga0209436_100629 Ga0209436_1006298 350
149 3300025208 Ga0209436_113047 Ga0209436_1130472 350
150 3300025242 Ga0209258_100036 Ga0209258_100036244 350
151 3300025254 Ga0209148_1000139 Ga0209148_100013953 350
152 3300025284 Ga0209130_1002692 Ga0209130_10026927 350
153 3300025302 Ga0207426_1000139 Ga0207426_1000139142 350
154 3300025302 Ga0207426_1005945 Ga0207426_10059456 350
155 3300025304 Ga0209257_1000008 Ga0209257_100000822 350
156 3300025923 Ga0207681_10117056 Ga0207681_101170562 350
157 3300025935 Ga0207709_10000010 Ga0207709_10000010425 350
158 3300026041 Ga0207639_10170037 Ga0207639_101700372 350
159 3300028794 Ga0307515_10070512 Ga0307515_100705123 350
160 3300028794 Ga0307515_10084207 Ga0307515_100842073 350
161 3300030744 Ga0316181_1086010 Ga0316181_10860101 350
162 3300031548 Ga0307408_100007659 Ga0307408_1000076596 350
163 3300031727 Ga0316576_10111805 Ga0316576_101118052 350
164 3300031731 Ga0307405_10000006 Ga0307405_10000006132 350
165 3300031852 Ga0307410_10000028 Ga0307410_1000002839 350
166 3300031901 Ga0307406_10000153 Ga0307406_1000015332 350
167 3300031903 Ga0307407_10000003 Ga0307407_10000003112 350
168 3300031903 Ga0307407_10002126 Ga0307407_100021265 350
169 3300031911 Ga0307412_10000009 Ga0307412_10000009240 350
170 3300031911 Ga0307412_10048070 Ga0307412_100480703 350
171 3300032002 Ga0307416_100000002 Ga0307416_100000002358 350
172 3300032004 Ga0307414_10000002 Ga0307414_1000000231 350
173 3300032004 Ga0307414_10003336 Ga0307414_100033365 350
174 3300032004 Ga0307414_10004727 Ga0307414_100047273 350
175 3300032004 Ga0307414_10009544 Ga0307414_100095442 350
176 3300032004 Ga0307414_10020320 Ga0307414_100203204 350
177 3300032004 Ga0307414_10149197 Ga0307414_101491972 350
178 3300032004 Ga0307414_10185008 Ga0307414_101850082 350
179 3300032005 Ga0307411_10000001 Ga0307411_1000000153 350
180 3300033180 Ga0307510_10125151 Ga0307510_101251513 350
181 3300036712 Ga0316584_0061639 Ga0316584_0061639_1029_2090 350
182 3300041411 Ga0439466_0000701 Ga0439466_0000701_3435_4523 350
183 3300041494 Ga0451837_1362693 Ga0451837_1362693_475_1527 350
184 3300045049 Ga0466959_0008205 Ga0466959_0008205_5224_6318 350
185 3300046507 Ga0495606_0016597 Ga0495606_0016597_3036_4124 350
186 3300046507 Ga0495606_0083829 Ga0495606_0083829_372_1424 350
187 3300046512 Ga0495610_0000240 Ga0495610_0000240_52655_53707 350
188 3300046512 Ga0495610_0000294 Ga0495610_0000294_9511_10563 350
189 3300046522 Ga0495643_0000970 Ga0495643_0000970_2227_3279 350
190 3300046616 Ga0495668_0000791 Ga0495668_0000791_19122_20174 350
191 3300046660 Ga0495625_0026507 Ga0495625_0026507_2290_3342 350
192 3300047470 Ga0495681_0043407 Ga0495681_0043407_1026_2078 350
193 3300047472 Ga0495686_0000268 Ga0495686_0000268_37836_38888 350
194 3300048919 Ga0496116_0000079 Ga0496116_0000079_23426_24514 350
195 3300048919 Ga0496116_0001485 Ga0496116_0001485_19860_20954 350
196 3300048920 Ga0496117_0010007 Ga0496117_0010007_3371_4465 350
197 3300048920 Ga0496117_0054799 Ga0496117_0054799_149_1237 350
198 3300048924 Ga0496121_0000007 Ga0496121_0000007_887576_888628 350
199 3300048925 Ga0496122_0002827 Ga0496122_0002827_12086_13138 350
200 3300048925 Ga0496122_0007461 Ga0496122_0007461_711_1805 350
201 3300048926 Ga0496123_0004372 Ga0496123_0004372_10093_11187 350
202 3300048926 Ga0496123_0015929 Ga0496123_0015929_1302_2354 350
203 3300048928 Ga0496125_0000142 Ga0496125_0000142_3069_4157 350
204 3300048928 Ga0496125_0073195 Ga0496125_0073195_1498_2592 350
205 3300048929 Ga0496126_0007154 Ga0496126_0007154_7555_8607 350
206 3300048929 Ga0496126_0142566 Ga0496126_0142566_463_1551 350
207 3300049671 Ga0501238_000148 Ga0501238_000148_5265_6317 350
208 3300049679 Ga0501249_000004 Ga0501249_000004_22498_23550 350
209 3300049679 Ga0501249_001841 Ga0501249_001841_2227_3279 350
210 3300049758 Ga0501241_000162 Ga0501241_000162_206_1258 350
211 3300049766 Ga0501269_001588 Ga0501269_001588_1069_2157 350
212 3300049766 Ga0501269_002636 Ga0501269_002636_202_1254 350
213 3300049776 Ga0501280_001772 Ga0501280_001772_356_1408 350
214 3300049776 Ga0501280_007951 Ga0501280_007951_335_1387 350
215 3300049822 Ga0501035_0015298 Ga0501035_0015298_4487_5575 350
216 3300053088 Ga0500644_0000422 Ga0500644_0000422_7893_8987 350
217 3300053093 Ga0500651_0000528 Ga0500651_0000528_14435_15487 350
218 3300053096 Ga0500641_0000007 Ga0500641_0000007_189159_190247 350
219 3300053096 Ga0500641_0000051 Ga0500641_0000051_27216_28286 350
220 3300053096 Ga0500641_0000366 Ga0500641_0000366_6842_7912 350
221 3300053109 Ga0500569_000948 Ga0500569_000948_2207_3301 350
222 3300053121 Ga0500607_119019 Ga0500607_119019_61_1155 350
223 3300053134 Ga0500658_0001255 Ga0500658_0001255_2194_3288 350
224 3300053136 Ga0500559_0021139 Ga0500559_0021139_593_1687 350
225 3300053142 Ga0500577_0000636 Ga0500577_0000636_13_1107 350
226 3300053153 Ga0500616_0006054 Ga0500616_0006054_6413_7465 350
227 3300053156 Ga0500622_0000305 Ga0500622_0000305_24691_25743 350
228 3300053158 Ga0500627_0008971 Ga0500627_0008971_303_1355 350
229 3300053726 Ga0500584_034532 Ga0500584_034532_589_1641 350
230 iso_pu_bacteria 2513020052 2513233549 350
231 iso_pu_bacteria 2643221667 2644372780 350
232 iso_pu_bacteria 2643221716 2644644393 350
233 iso_pu_bacteria 2643221725 2644682850 350
234 iso_pu_bacteria 2721755487 2722727797 350
235 iso_pu_bacteria 2738543023 2739301505 350
236 iso_pu_bacteria 2739367656 2739614340 350
237 iso_pu_bacteria 2802428842 2802654535 350
238 iso_pu_bacteria 2816332280 2817416514 350
239 iso_pu_bacteria 2818991442 2819578149 350
240 iso_pu_bacteria 2958458903 2958462336 350
241 iso_pu_bacteria 2965320100 2965320947 350
242 iso_pu_bacteria 2977268062 2977270546 350
243 iso_pu_bacteria 8056440228 8056441691 350

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00195

Chal_sti_synt_N

Chalcone and stilbene synthases, N-terminal domain

32

218

0.92

PF08541

ACP_syn_III_C

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal

273

364

0.91

PF02797

Chal_sti_synt_C

Chalcone and stilbene synthases, C-terminal domain

230

364

0.88

PF08545

ACP_syn_III

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III

151

232

0.86

PF08392

FAE1_CUT1_RppA

FAE1/Type III polyketide synthase-like protein

38

224

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jd3-assembly2.cif.gz_C crystal structure of mycobacterium tuberculosis pks11 reveals intermediates in the synthesis of methyl-branched alkylpyrones 0.9463 4 350
4jd3-assembly2.cif.gz_C crystal structure of mycobacterium tuberculosis pks11 reveals intermediates in the synthesis of methyl-branched alkylpyrones 0.9359 4 350
4jap-assembly2.cif.gz_A crystal structure of mycobacterium tuberculosis pks11 reveals intermediates in the synthesis of methyl-branched alkylpyrones 0.9249 1 350
1u0m-assembly1.cif.gz_B crystal structure of 1,3,6,8-tetrahydroxynaphthalene synthase (thns) from streptomyces coelicolor a3(2): a bacterial type iii polyketide synthase (pks) provides insights into enzymatic control of reactive polyketide intermediates 0.9249 4 350
4jap-assembly2.cif.gz_A crystal structure of mycobacterium tuberculosis pks11 reveals intermediates in the synthesis of methyl-branched alkylpyrones 0.9223 1 350
ID Description Score Start End Superfamily
4jaoA02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9433 207 350 3.40.47.10
af_P9WPF3_1_208_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9377 3 201 3.40.47.10
4jaoA02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9309 207 350 3.40.47.10
af_I1MDK4_98_235_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9173 87 204 3.40.47.10
af_Q75M74_119_236_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9161 92 204 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A1Q3WFE6-F1-model_v4 Type III polyketide synthase 0.9816 1 350 GO:0016747
GO:0030639
AF-A0A848ZSJ3-F1-model_v4 Type III polyketide synthase 0.9735 2 314 GO:0016747
GO:0030639
AF-A0A081DF79-F1-model_v4 Naringenin-chalcone synthase (EC 2.3.1.74) 0.9677 1 201 GO:0016210
GO:0030639
AF-A0A4Z0L219-F1-model_v4 deleted 0.9674 3 350
AF-K2DAG5-F1-model_v4 Type III polyketide synthase 0.9673 1 350 GO:0016747
GO:0030639

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pLDDT pTM Quality
90.87 0.91 High
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Predicted Structure (AlphaFold2)

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