F354891

General Info

Members Datasets Scaffolds Average Seq Length
242 195 200 690

Family's Representative Sequence

Representative Sequence 3300039453|Ga0436362_0451796|Ga0436362_0451796_1349_3637
Length 762
Sequence MSRHVGLGTGDGYGCRQHVTAAELLVIDELRVLGRVQNSHSYLRSNGSESQPSRSNTMSESLKVQPHHLERSAYLYIRQSSMRQVIENVESTKRQYALRSRAIALGWRDDQINVIDNDQGESGASAAWREGFQRLVSDVGMGHAGIVMGLEVSRLARNNADWHRLLEICALADTLILDEDGIYDPTSFNDRLLLGLKGTMSEAELHVLKARLRGGILNKVRRGEYRCPLPTGLAYDEAGNVVLDPDAQVRETIAYFFETFLRVGSACQTVKVFRKEGVCFPSRFRMSERIVFRPLTAWTATRVLTNPRYAGAYVYGRRRYRRAVDGKKDIRNREFGDWLACIPNAHPGYITWEQYQQNLKLLAANGRTYALARSSPPREGPALLQGRAVCGRCGRHFRVTYRSGRGKQEAWYVCDRAHGALGEPNCQTIAAPPIDAAIGALIAERMTPAAVELALEIRREIEARHEEADQLRCRAIQRAQIDVDLAKRRFMLVDPNNRLVADTLESEWNDKLRALSQAQEERERGRQQDQLVLDDAIRQRLVMMTNDFNKLWNDPSTANRERKRLLAHIIEDATLIKLPTEGITKIHVRFKGGKTETLTALNPKTSGQQVKTPPTIVELVDKLLDQHIYSEIADILNQQGLRPGGSVRPGRGTARFTALRVAYLTHRYALRSRYDRLRKRGMLTKAEAAARLGIHALTLVRWTEYGIVNRHAYNAHAYLYELPNAKLPAKHSSRWDTLVDRVTALKMAKESKPSDPIEGVVL

Samples

Sample ID Description Type Environment
1 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
2 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
3 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
4 2516143018 Ensifer sp. BR816 Isolate Nodule
5 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
6 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
7 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
8 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
9 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
10 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
11 2791355266 Rhizobium sp. L43 Isolate Nodule
12 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
13 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
14 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
15 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
16 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
17 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
18 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
19 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
20 2844163670 Ensifer sp. 1H6 Isolate Unclassified
21 2856314179 Mesorhizobium sp. M3A.F.Ca.ET.175.01.1.1 Isolate Nodule
22 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
23 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
24 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
25 2906414383 Mesorhizobium sp. M3A.F.Ca.ET.174.01.1.1 Isolate Nodule
26 2922185730 Mesorhizobium sp. M2A.F.Ca.ET.037.01.1.1 Isolate Nodule
27 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
28 2968097103 Mesorhizobium sp. M1A.F.Ca.IN.020.30.1.1 Isolate Nodule
29 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
30 2979779861 Mesorhizobium sp. M1A.F.Ca.IN.022.02.1.1 Isolate Nodule
31 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
32 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
33 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
34 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
35 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
36 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
37 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
38 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
39 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
40 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
65 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
66 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
73 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
74 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
75 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
79 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
80 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
81 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
82 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
86 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
87 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
91 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
92 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
93 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
96 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
97 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
98 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
99 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
100 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
101 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
102 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
103 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
104 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
105 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
106 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
107 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
108 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
109 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
110 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
111 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
112 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
113 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
114 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
115 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
116 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
117 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
121 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
122 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
123 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
124 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
125 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
129 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
130 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
131 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
132 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
136 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
139 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
140 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
141 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
160 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
163 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
166 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
167 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
168 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
169 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
170 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
171 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
172 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
173 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
174 3300053097 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 endosphere Metagenome Endosphere
175 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
176 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
177 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
178 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
179 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
180 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
181 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
182 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
183 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
184 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
185 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
186 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
187 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
188 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
189 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
190 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
191 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
194 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
195 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.23
Metatranscriptomes 0.41
Isolates 17.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.5
Nodule 10.74
Rhizoplane 0.83
Rhizosphere 57.02
Stem 0
Stem Tuber 0
Unclassified 21.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10171950 3300003322 Bacteria 3790
2 Ga0068869_100018352 3300005334 Bacteria 4761
3 Ga0070689_100022079 3300005340 Bacteria 4749
4 Ga0070713_100035468 3300005436 Bacteria 4015
5 Ga0070701_10015571 3300005438 Bacteria 3516
6 Ga0070705_100010369 3300005440 Bacteria 4662
7 Ga0070706_100064207 3300005467 Bacteria 3393
8 Ga0070707_100022408 3300005468 Bacteria 5971
9 Ga0070707_100029490 3300005468 Bacteria 5223
10 Ga0070698_100053786 3300005471 Bacteria 4090
11 Ga0070698_100062999 3300005471 Bacteria 3740
12 Ga0070679_100126620 3300005530 Plasmid 2537
13 Ga0068855_100129434 3300005563 Bacteria 2884
14 Ga0070717_10035304 3300006028 Plasmid 4046
15 Ga0070717_10044474 3300006028 Bacteria 3626
16 Ga0070717_10069948 3300006028 Bacteria 2924
17 Ga0070717_10117758 3300006028 Unclassified 2272
18 Ga0097621_100087207 3300006237 Bacteria 2606
19 Ga0075430_100039011 3300006846 Bacteria 4022
20 Ga0099794_10013715 3300007265 Bacteria 3535
21 Ga0111539_10148397 3300009094 Bacteria 2745
22 Ga0105237_10103381 3300009545 Bacteria 2841
23 Ga0105246_10026940 3300011119 Bacteria 3761
24 Ga0157369_10023825 3300013105 Bacteria 6815
25 Ga0157372_10110665 3300013307 Unclassified 3146
26 Ga0163163_10039149 3300014325 Bacteria 4625
27 Ga0213873_10001319 3300021358 Bacteria 4090
28 Ga0213873_10006204 3300021358 Bacteria 2342
29 Ga0213876_10005838 3300021384 Bacteria 6737
30 Ga0209564_1012771 3300025295 Bacteria 3629
31 Ga0207684_10009992 3300025910 Bacteria 8366
32 Ga0207707_10116558 3300025912 Bacteria 2334
33 Ga0207652_10108529 3300025921 Unclassified 2460
34 Ga0207670_10007935 3300025936 Bacteria 5962
35 Ga0207689_10027057 3300025942 Bacteria 4801
36 Ga0207675_100038538 3300026118 Bacteria 4460
37 Ga0209371_1000317 3300027312 Bacteria 52767
38 Ga0307515_10064017 3300028794 Bacteria 5149
39 Ga0265338_10045276 3300028800 Bacteria 4048
40 Ga0265338_10053065 3300028800 Bacteria 3631
41 Ga0265324_10010554 3300029957 Bacteria 3553
42 Ga0268256_1000217 3300030500 Bacteria 63864
43 Ga0265762_1003037 3300030760 Bacteria 3001
44 Ga0265320_10020652 3300031240 Bacteria 3563
45 Ga0265340_10007192 3300031247 Bacteria 6064
46 Ga0265331_10008446 3300031250 Bacteria 5859
47 Ga0265331_10017517 3300031250 Bacteria 3732
48 Ga0265327_10027902 3300031251 Bacteria 3241
49 Ga0265316_10033366 3300031344 Bacteria 4192
50 Ga0265316_10046037 3300031344 Bacteria 3459
51 Ga0307509_10059623 3300031507 Bacteria 4038
52 Ga0316576_10038044 3300031727 Plasmid 3447
53 Ga0307516_10065582 3300031730 Bacteria 3505
54 Ga0307518_10015128 3300031838 Bacteria 5526
55 Ga0307409_100011260 3300031995 Bacteria 5626
56 Ga0307416_100030383 3300032002 Bacteria 4053
57 Ga0307510_10036163 3300033180 Bacteria 5500
58 Ga0315911_1020458 3300033442 Bacteria 3328
59 Ga0316574_0025435 3300035398 Bacteria 3554
60 Ga0316574_0026553 3300035398 Bacteria 3483
61 Ga0316574_0078286 3300035398 Bacteria 2096
62 Ga0373935_0055528 3300035692 Plasmid 2523
63 Ga0373933_0013577 3300035724 Bacteria 4518
64 Ga0373947_0011975 3300035725 Bacteria 4969
65 Ga0373937_0041465 3300036401 Plasmid 4198
66 Ga0316582_0024937 3300036647 Bacteria 3584
67 Ga0316584_0036719 3300036712 Bacteria 3636
68 Ga0316584_0041675 3300036712 Plasmid 3422
69 Ga0316584_0082425 3300036712 Bacteria 2409
70 Ga0373925_0037791 3300037068 Bacteria 3566
71 Ga0436364_0210717 3300037853 Bacteria 3585
72 Ga0395901_0072217 3300038443 Bacteria 3597
73 Ga0400491_05987 3300038727 Bacteria 3924
74 Ga0400485_01586 3300038735 Plasmid 3594
75 Ga0400486_25928 3300038742 Bacteria 7987
76 Ga0400487_04883 3300039110 Bacteria 2321
77 Ga0400487_16901 3300039110 Bacteria 5577
78 Ga0436365_0081362 3300039437 Bacteria 3058
79 Ga0436365_0914089 3300039437 Bacteria 4461
80 Ga0436363_0235724 3300039450 Bacteria 6443
81 Ga0436362_0451796 3300039453 Bacteria 4777
82 Ga0436362_0544099 3300039453 Bacteria 2549
83 Ga0451833_1279884 3300041491 Bacteria 3421
84 Ga0451833_1284047 3300041491 Bacteria 3532
85 Ga0451835_0342677 3300041492 Bacteria 3519
86 Ga0451835_0474775 3300041492 Bacteria 2943
87 Ga0451837_0878400 3300041494 Bacteria 3391
88 Ga0451839_0673123 3300041496 Bacteria 3660
89 Ga0451839_1327783 3300041496 Bacteria 3539
90 Ga0451841_0454304 3300041498 Bacteria 3393
91 Ga0451841_1389425 3300041498 Bacteria 3377
92 Ga0451845_0001403 3300041501 Bacteria 3391
93 Ga0451845_0572898 3300041501 Bacteria 3388
94 Ga0451847_0332517 3300041503 Bacteria 3660
95 Ga0451847_0974834 3300041503 Bacteria 3391
96 Ga0451849_0022113 3300041505 Bacteria 3526
97 Ga0451849_0215111 3300041505 Bacteria 3525
98 Ga0451851_0133206 3300041507 Bacteria 10024
99 Ga0451851_1270563 3300041507 Bacteria 3393
100 Ga0451843_0846846 3300041509 Bacteria 3514
101 Ga0451843_1023022 3300041509 Bacteria 3393
102 Ga0451855_0922367 3300041511 Bacteria 3447
103 Ga0451853_0453565 3300041512 Bacteria 3391
104 Ga0451853_2011369 3300041512 Bacteria 3632
105 Ga0495603_0042536 3300046455 Bacteria 2715
106 Ga0495590_0010106 3300046457 Bacteria 3562
107 Ga0495580_0020370 3300046472 Bacteria 4908
108 Ga0495580_0021798 3300046472 Bacteria 4724
109 Ga0495582_0021689 3300046473 Bacteria 3514
110 Ga0495582_0034748 3300046473 Bacteria 2771
111 Ga0495662_0016424 3300046476 Bacteria 3585
112 Ga0495584_0019293 3300046491 Bacteria 3463
113 Ga0495594_0023359 3300046499 Plasmid 3312
114 Ga0495607_0028813 3300046501 Bacteria 3421
115 Ga0495618_0008350 3300046514 Bacteria 6268
116 Ga0495628_0046206 3300046516 Bacteria 3459
117 Ga0495630_0041688 3300046517 Bacteria 3428
118 Ga0495632_0019633 3300046519 Bacteria 3677
119 Ga0495637_0011253 3300046520 Bacteria 4305
120 Ga0495643_0017670 3300046522 Bacteria 4163
121 Ga0495666_0006919 3300046526 Bacteria 5696
122 Ga0495665_0013331 3300046531 Bacteria 4448
123 Ga0495665_0044151 3300046531 Bacteria 2369
124 Ga0495621_0002631 3300046539 Bacteria 4854
125 Ga0495634_0012223 3300046642 Bacteria 6223
126 Ga0495625_0036714 3300046660 Bacteria 3599
127 Ga0495625_0048123 3300046660 Bacteria 3072
128 Ga0495658_0019135 3300046683 Bacteria 3570
129 Ga0495658_0052655 3300046683 Unclassified 2310
130 Ga0495649_0015992 3300046694 Bacteria 4259
131 Ga0495604_0034882 3300047317 Bacteria 3975
132 Ga0495674_0052511 3300047319 Bacteria 3586
133 Ga0495674_0056477 3300047319 Bacteria 3437
134 Ga0495672_0040023 3300047320 Bacteria 2845
135 Ga0495687_017174 3300047443 Bacteria 3618
136 Ga0495687_027726 3300047443 Bacteria 2646
137 Ga0495684_0043520 3300047471 Bacteria 3438
138 Ga0495593_0046654 3300047673 Bacteria 2307
139 Ga0495614_0017264 3300048089 Bacteria 3136
140 Ga0496105_0024420 3300048908 Bacteria 4910
141 Ga0496110_0046019 3300048913 Bacteria 3816
142 Ga0496119_0017873 3300048922 Bacteria 5311
143 Ga0496121_0050182 3300048924 Bacteria 3528
144 Ga0496121_0053334 3300048924 Bacteria 3388
145 Ga0496124_0025526 3300048927 Bacteria 5351
146 Ga0496125_0066796 3300048928 Bacteria 2839
147 Ga0496126_0011582 3300048929 Bacteria 9104
148 Ga0495682_0010934 3300049460 Bacteria 3498
149 Ga0501033_0040902 3300049570 Bacteria 3460
150 Ga0501036_0024819 3300049572 Bacteria 5055
151 Ga0501037_0096702 3300049573 Bacteria 2134
152 Ga0501038_0032465 3300049574 Bacteria 4606
153 Ga0501038_0050651 3300049574 Bacteria 3587
154 Ga0501039_0033013 3300049575 Bacteria 3993
155 Ga0501040_0022992 3300049576 Bacteria 4177
156 Ga0501041_0007042 3300049577 Bacteria 6597
157 Ga0501043_0043448 3300049579 Bacteria 3532
158 Ga0501046_0035348 3300049580 Bacteria 4027
159 Ga0501047_0044484 3300049581 Plasmid 4290
160 Ga0501048_0053937 3300049582 Bacteria 2856
161 Ga0501067_0010533 3300049583 Bacteria 5120
162 Ga0501072_0043307 3300049588 Plasmid 3537
163 Ga0501076_0016502 3300049592 Bacteria 5599
164 Ga0501077_0023465 3300049593 Bacteria 3913
165 Ga0501079_0016114 3300049741 Bacteria 5711
166 Ga0501080_0014654 3300049742 Bacteria 7221
167 Ga0501080_0062600 3300049742 Bacteria 3463
168 Ga0501081_0015285 3300049743 Bacteria 5063
169 Ga0501267_000490 3300049764 Plasmid 3078
170 Ga0501035_0074318 3300049822 Unclassified 3007
171 Ga0501045_0014928 3300049824 Bacteria 5510
172 Ga0495601_0009114 3300053077 Bacteria 5859
173 Ga0495612_0004412 3300053078 Bacteria 5836
174 Ga0500610_0028982 3300053079 Bacteria 2793
175 Ga0495619_0011039 3300053085 Bacteria 5683
176 Ga0500644_0001493 3300053088 Bacteria 6154
177 Ga0500646_0002314 3300053090 Bacteria 4957
178 Ga0500651_0025138 3300053093 Bacteria 3736
179 Ga0500641_0007560 3300053096 Bacteria 3875
180 Ga0500648_008610 3300053097 Bacteria 5371
181 Ga0500556_0005634 3300053104 Bacteria 3536
182 Ga0500557_001728 3300053105 Bacteria 3718
183 Ga0500562_004777 3300053108 Bacteria 3411
184 Ga0500614_001437 3300053123 Bacteria 5704
185 Ga0500621_007372 3300053126 Bacteria 3588
186 Ga0500642_0004427 3300053130 Bacteria 4394
187 Ga0500559_0005724 3300053136 Bacteria 5680
188 Ga0500568_0000447 3300053139 Bacteria 31023
189 Ga0500585_000912 3300053144 Plasmid 4967
190 Ga0500588_0002801 3300053146 Bacteria 3606
191 Ga0500603_000932 3300053150 Bacteria 6918
192 Ga0500616_0046040 3300053153 Bacteria 2320
193 Ga0500627_0008169 3300053158 Bacteria 3699
194 Ga0500630_010892 3300053159 Plasmid 4475
195 Ga0500633_0002842 3300053160 Bacteria 3655
196 Ga0500639_003202 3300053163 Bacteria 8262
197 Ga0501084_0034318 3300054114 Plasmid 4242
198 Ga0501084_0037318 3300054114 Bacteria 4059
199 Ga0501082_0021347 3300060353 Bacteria 5586
200 Ga0501082_0037084 3300060353 Plasmid 4201

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2824679649 2824680743 589
2 iso_pu_bacteria 2513237088 2513601235 595
3 3300031344 Ga0265316_10046037 Ga0265316_100460371 637
4 3300005467 Ga0070706_100064207 Ga0070706_1000642073 638
5 3300025910 Ga0207684_10009992 Ga0207684_100099926 638
6 3300035398 Ga0316574_0025435 Ga0316574_0025435_1378_3453 638
7 3300036712 Ga0316584_0082425 Ga0316584_0082425_245_2320 638
8 3300046472 Ga0495580_0020370 Ga0495580_0020370_622_2592 639
9 3300046526 Ga0495666_0006919 Ga0495666_0006919_2256_4226 639
10 3300005471 Ga0070698_100053786 Ga0070698_1000537863 641
11 3300005471 Ga0070698_100062999 Ga0070698_1000629991 641
12 3300049460 Ga0495682_0010934 Ga0495682_0010934_1243_3201 641
13 iso_pu_bacteria 2838029111 2838034772 643
14 iso_pu_bacteria 2842475841 2842481505 643
15 iso_pu_bacteria 2842502639 2842508419 643
16 3300037853 Ga0436364_0210717 Ga0436364_0210717_1381_3525 644
17 3300039437 Ga0436365_0081362 Ga0436365_0081362_105_2249 644
18 3300009094 Ga0111539_10148397 Ga0111539_101483973 646
19 3300006028 Ga0070717_10069948 Ga0070717_100699482 649
20 3300013307 Ga0157372_10110665 Ga0157372_101106651 649
21 3300005436 Ga0070713_100035468 Ga0070713_1000354683 651
22 3300006028 Ga0070717_10117758 Ga0070717_101177581 651
23 3300031344 Ga0265316_10033366 Ga0265316_100333664 654
24 3300053079 Ga0500610_0028982 Ga0500610_0028982_402_2420 654
25 3300005468 Ga0070707_100029490 Ga0070707_1000294903 656
26 3300006028 Ga0070717_10044474 Ga0070717_100444742 657
27 3300046531 Ga0495665_0013331 Ga0495665_0013331_2240_4261 658
28 3300047319 Ga0495674_0056477 Ga0495674_0056477_67_2088 658
29 3300047320 Ga0495672_0040023 Ga0495672_0040023_80_2101 658
30 3300038443 Ga0395901_0072217 Ga0395901_0072217_1445_3484 659
31 3300046455 Ga0495603_0042536 Ga0495603_0042536_593_2659 661
32 3300031250 Ga0265331_10008446 Ga0265331_100084463 662
33 3300046539 Ga0495621_0002631 Ga0495621_0002631_1970_4039 662
34 3300035398 Ga0316574_0078286 Ga0316574_0078286_61_2079 663
35 3300031251 Ga0265327_10027902 Ga0265327_100279022 664
36 3300053097 Ga0500648_008610 Ga0500648_008610_483_2540 665
37 3300053123 Ga0500614_001437 Ga0500614_001437_1925_3982 665
38 3300053136 Ga0500559_0005724 Ga0500559_0005724_1905_3962 665
39 3300053144 Ga0500585_000912 Ga0500585_000912_2606_4663 665
40 3300053150 Ga0500603_000932 Ga0500603_000932_3218_5275 665
41 3300053159 Ga0500630_010892 Ga0500630_010892_314_2371 665
42 3300053163 Ga0500639_003202 Ga0500639_003202_3881_5938 665
43 3300039110 Ga0400487_04883 Ga0400487_04883_28_2052 666
44 iso_pu_bacteria 2844163670 2844165459 670
45 iso_pu_bacteria 2941499720 2941507058 670
46 iso_pu_bacteria 2513237162 2514024156 673
47 3300041491 Ga0451833_1279884 Ga0451833_1279884_1256_3325 674
48 3300041492 Ga0451835_0342677 Ga0451835_0342677_201_2270 674
49 3300041494 Ga0451837_0878400 Ga0451837_0878400_67_2136 674
50 3300041496 Ga0451839_1327783 Ga0451839_1327783_67_2136 674
51 3300041498 Ga0451841_1389425 Ga0451841_1389425_67_2136 674
52 3300041501 Ga0451845_0001403 Ga0451845_0001403_67_2136 674
53 3300041503 Ga0451847_0974834 Ga0451847_0974834_67_2136 674
54 3300041505 Ga0451849_0215111 Ga0451849_0215111_1256_3325 674
55 3300041507 Ga0451851_0133206 Ga0451851_0133206_5648_7717 674
56 3300041509 Ga0451843_1023022 Ga0451843_1023022_1256_3325 674
57 3300041511 Ga0451855_0922367 Ga0451855_0922367_1256_3325 674
58 3300041512 Ga0451853_0453565 Ga0451853_0453565_67_2136 674
59 3300047443 Ga0495687_027726 Ga0495687_027726_104_2173 674
60 3300028800 Ga0265338_10053065 Ga0265338_100530652 675
61 3300031507 Ga0307509_10059623 Ga0307509_100596234 677
62 3300041491 Ga0451833_1284047 Ga0451833_1284047_1265_3376 677
63 3300041492 Ga0451835_0474775 Ga0451835_0474775_18_2129 677
64 3300041496 Ga0451839_0673123 Ga0451839_0673123_1398_3509 677
65 3300041498 Ga0451841_0454304 Ga0451841_0454304_18_2129 677
66 3300041501 Ga0451845_0572898 Ga0451845_0572898_18_2129 677
67 3300041503 Ga0451847_0332517 Ga0451847_0332517_1398_3509 677
68 3300041505 Ga0451849_0022113 Ga0451849_0022113_18_2129 677
69 3300041507 Ga0451851_1270563 Ga0451851_1270563_18_2129 677
70 3300041509 Ga0451843_0846846 Ga0451843_0846846_1260_3371 677
71 3300041512 Ga0451853_2011369 Ga0451853_2011369_1390_3501 677
72 3300014325 Ga0163163_10039149 Ga0163163_100391494 678
73 3300036401 Ga0373937_0041465 Ga0373937_0041465_1382_3451 678
74 iso_pu_bacteria 2510917015 2511106541 678
75 iso_pu_bacteria 2516143018 2516210639 678
76 iso_pu_bacteria 2524023205 2524443505 678
77 iso_pu_bacteria 2582581294 2585201024 678
78 iso_pu_bacteria 2582581294 2585205199 678
79 iso_pu_bacteria 2582581294 2585205345 678
80 iso_pu_bacteria 2582581294 2585205813 678
81 iso_pu_bacteria 2582581299 2585231683 678
82 iso_pu_bacteria 2582581299 2585233745 678
83 iso_pu_bacteria 2582581299 2585233773 678
84 iso_pu_bacteria 2615840626 2616306947 678
85 iso_pu_bacteria 2615840626 2616312942 678
86 iso_pu_bacteria 2615840626 2616313204 678
87 iso_pu_bacteria 2791355123 2792751375 678
88 iso_pu_bacteria 2791355123 2792751401 678
89 iso_pu_bacteria 2791355266 2793364432 678
90 iso_pu_bacteria 2802429606 2805938312 678
91 iso_pu_bacteria 2824746037 2824749511 678
92 iso_pu_bacteria 2841851746 2841856562 678
93 iso_pu_bacteria 2842311132 2842317693 678
94 iso_pu_bacteria 2856314179 2856314199 678
95 iso_pu_bacteria 2879083081 2879084683 678
96 iso_pu_bacteria 2883087390 2883093391 678
97 iso_pu_bacteria 2903748898 2903754571 678
98 iso_pu_bacteria 2906414383 2906417254 678
99 iso_pu_bacteria 2922185730 2922192079 678
100 iso_pu_bacteria 2968097103 2968102801 678
101 iso_pu_bacteria 2977864932 2977865914 678
102 iso_pu_bacteria 2979779861 2979783761 678
103 iso_pu_bacteria 637000159 637078079 678
104 iso_pu_bacteria 8019565922 8019574614 678
105 3300009545 Ga0105237_10103381 Ga0105237_101033813 679
106 3300011119 Ga0105246_10026940 Ga0105246_100269401 679
107 3300005563 Ga0068855_100129434 Ga0068855_1001294343 680
108 3300031995 Ga0307409_100011260 Ga0307409_1000112603 680
109 3300032002 Ga0307416_100030383 Ga0307416_1000303835 680
110 iso_pu_bacteria 2615840626 2616312124 680
111 iso_pu_bacteria 2775507266 2778175022 680
112 3300005334 Ga0068869_100018352 Ga0068869_1000183522 681
113 3300005340 Ga0070689_100022079 Ga0070689_1000220793 681
114 3300005438 Ga0070701_10015571 Ga0070701_100155712 681
115 3300005440 Ga0070705_100010369 Ga0070705_1000103693 681
116 3300021358 Ga0213873_10006204 Ga0213873_100062042 681
117 3300021384 Ga0213876_10005838 Ga0213876_100058385 681
118 3300025936 Ga0207670_10007935 Ga0207670_100079353 681
119 3300025942 Ga0207689_10027057 Ga0207689_100270575 681
120 3300026118 Ga0207675_100038538 Ga0207675_1000385382 681
121 3300030760 Ga0265762_1003037 Ga0265762_10030371 681
122 3300035692 Ga0373935_0055528 Ga0373935_0055528_49_2127 681
123 3300035725 Ga0373947_0011975 Ga0373947_0011975_1794_3872 681
124 3300037068 Ga0373925_0037791 Ga0373925_0037791_122_2200 681
125 3300039437 Ga0436365_0914089 Ga0436365_0914089_2254_4368 681
126 3300039453 Ga0436362_0544099 Ga0436362_0544099_255_2369 681
127 3300046683 Ga0495658_0052655 Ga0495658_0052655_139_2217 681
128 3300047317 Ga0495604_0034882 Ga0495604_0034882_1530_3626 681
129 3300053090 Ga0500646_0002314 Ga0500646_0002314_738_2996 681
130 3300005530 Ga0070679_100126620 Ga0070679_1001266201 682
131 3300006028 Ga0070717_10035304 Ga0070717_100353042 682
132 3300006846 Ga0075430_100039011 Ga0075430_1000390114 682
133 3300007265 Ga0099794_10013715 Ga0099794_100137153 682
134 3300013105 Ga0157369_10023825 Ga0157369_100238255 682
135 3300021358 Ga0213873_10001319 Ga0213873_100013192 682
136 3300025295 Ga0209564_1012771 Ga0209564_10127712 682
137 3300025921 Ga0207652_10108529 Ga0207652_101085292 682
138 3300027312 Ga0209371_1000317 Ga0209371_10003174 682
139 3300028794 Ga0307515_10064017 Ga0307515_100640172 682
140 3300028800 Ga0265338_10045276 Ga0265338_100452763 682
141 3300029957 Ga0265324_10010554 Ga0265324_100105542 682
142 3300030500 Ga0268256_1000217 Ga0268256_100021775 682
143 3300031240 Ga0265320_10020652 Ga0265320_100206523 682
144 3300031247 Ga0265340_10007192 Ga0265340_100071922 682
145 3300031250 Ga0265331_10017517 Ga0265331_100175172 682
146 3300031727 Ga0316576_10038044 Ga0316576_100380444 682
147 3300031730 Ga0307516_10065582 Ga0307516_100655822 682
148 3300033180 Ga0307510_10036163 Ga0307510_100361632 682
149 3300033442 Ga0315911_1020458 Ga0315911_10204584 682
150 3300035398 Ga0316574_0026553 Ga0316574_0026553_550_2625 682
151 3300035724 Ga0373933_0013577 Ga0373933_0013577_1041_3107 682
152 3300036647 Ga0316582_0024937 Ga0316582_0024937_1388_3463 682
153 3300036712 Ga0316584_0036719 Ga0316584_0036719_1436_3556 682
154 3300036712 Ga0316584_0041675 Ga0316584_0041675_1240_3315 682
155 3300039453 Ga0436362_0451796 Ga0436362_0451796_1349_3637 682
156 3300046457 Ga0495590_0010106 Ga0495590_0010106_64_2451 682
157 3300046472 Ga0495580_0021798 Ga0495580_0021798_308_2365 682
158 3300046473 Ga0495582_0034748 Ga0495582_0034748_689_2746 682
159 3300046476 Ga0495662_0016424 Ga0495662_0016424_159_2222 682
160 3300046491 Ga0495584_0019293 Ga0495584_0019293_97_2214 682
161 3300046499 Ga0495594_0023359 Ga0495594_0023359_458_2527 682
162 3300046501 Ga0495607_0028813 Ga0495607_0028813_1278_3395 682
163 3300046514 Ga0495618_0008350 Ga0495618_0008350_3245_5308 682
164 3300046516 Ga0495628_0046206 Ga0495628_0046206_539_2605 682
165 3300046517 Ga0495630_0041688 Ga0495630_0041688_1207_3270 682
166 3300046519 Ga0495632_0019633 Ga0495632_0019633_96_2213 682
167 3300046520 Ga0495637_0011253 Ga0495637_0011253_1383_3500 682
168 3300046522 Ga0495643_0017670 Ga0495643_0017670_788_2905 682
169 3300046531 Ga0495665_0044151 Ga0495665_0044151_278_2335 682
170 3300046642 Ga0495634_0012223 Ga0495634_0012223_3134_5197 682
171 3300046660 Ga0495625_0036714 Ga0495625_0036714_1366_3483 682
172 3300046660 Ga0495625_0048123 Ga0495625_0048123_935_3001 682
173 3300046694 Ga0495649_0015992 Ga0495649_0015992_1384_3501 682
174 3300047319 Ga0495674_0052511 Ga0495674_0052511_1386_3443 682
175 3300047443 Ga0495687_017174 Ga0495687_017174_1368_3485 682
176 3300047471 Ga0495684_0043520 Ga0495684_0043520_1334_3397 682
177 3300048908 Ga0496105_0024420 Ga0496105_0024420_1254_3353 682
178 3300048913 Ga0496110_0046019 Ga0496110_0046019_1616_3715 682
179 3300048922 Ga0496119_0017873 Ga0496119_0017873_735_2834 682
180 3300048924 Ga0496121_0053334 Ga0496121_0053334_1259_3376 682
181 3300048927 Ga0496124_0025526 Ga0496124_0025526_1569_3668 682
182 3300048928 Ga0496125_0066796 Ga0496125_0066796_531_2630 682
183 3300049570 Ga0501033_0040902 Ga0501033_0040902_1264_3321 682
184 3300049572 Ga0501036_0024819 Ga0501036_0024819_2954_5011 682
185 3300049573 Ga0501037_0096702 Ga0501037_0096702_41_2098 682
186 3300049574 Ga0501038_0032465 Ga0501038_0032465_228_2285 682
187 3300049574 Ga0501038_0050651 Ga0501038_0050651_136_2205 682
188 3300049575 Ga0501039_0033013 Ga0501039_0033013_635_2692 682
189 3300049576 Ga0501040_0022992 Ga0501040_0022992_812_2869 682
190 3300049577 Ga0501041_0007042 Ga0501041_0007042_654_2711 682
191 3300049579 Ga0501043_0043448 Ga0501043_0043448_781_2838 682
192 3300049580 Ga0501046_0035348 Ga0501046_0035348_667_2724 682
193 3300049582 Ga0501048_0053937 Ga0501048_0053937_784_2841 682
194 3300049592 Ga0501076_0016502 Ga0501076_0016502_1043_3100 682
195 3300049593 Ga0501077_0023465 Ga0501077_0023465_1098_3155 682
196 3300049741 Ga0501079_0016114 Ga0501079_0016114_881_2938 682
197 3300049742 Ga0501080_0062600 Ga0501080_0062600_604_2661 682
198 3300049743 Ga0501081_0015285 Ga0501081_0015285_1305_3362 682
199 3300049764 Ga0501267_000490 Ga0501267_000490_82_2142 682
200 3300049824 Ga0501045_0014928 Ga0501045_0014928_1297_3354 682
201 3300053077 Ga0495601_0009114 Ga0495601_0009114_1359_3425 682
202 3300053078 Ga0495612_0004412 Ga0495612_0004412_3431_5497 682
203 3300053085 Ga0495619_0011039 Ga0495619_0011039_3111_5177 682
204 3300053088 Ga0500644_0001493 Ga0500644_0001493_129_2246 682
205 3300053093 Ga0500651_0025138 Ga0500651_0025138_22_2139 682
206 3300053096 Ga0500641_0007560 Ga0500641_0007560_1682_3799 682
207 3300053104 Ga0500556_0005634 Ga0500556_0005634_1362_3479 682
208 3300053105 Ga0500557_001728 Ga0500557_001728_149_2215 682
209 3300053108 Ga0500562_004777 Ga0500562_004777_949_3066 682
210 3300053126 Ga0500621_007372 Ga0500621_007372_1371_3488 682
211 3300053130 Ga0500642_0004427 Ga0500642_0004427_1455_3572 682
212 3300053139 Ga0500568_0000447 Ga0500568_0000447_1552_3651 682
213 3300053146 Ga0500588_0002801 Ga0500588_0002801_34_2151 682
214 3300053153 Ga0500616_0046040 Ga0500616_0046040_227_2293 682
215 3300053158 Ga0500627_0008169 Ga0500627_0008169_66_2183 682
216 3300053160 Ga0500633_0002842 Ga0500633_0002842_1415_3532 682
217 3300054114 Ga0501084_0037318 Ga0501084_0037318_1255_3312 682
218 3300060353 Ga0501082_0021347 Ga0501082_0021347_1999_4056 682
219 iso_pu_bacteria 8057575449 8057579145 682
220 3300005468 Ga0070707_100022408 Ga0070707_1000224086 683
221 3300049581 Ga0501047_0044484 Ga0501047_0044484_377_2500 683
222 3300049583 Ga0501067_0010533 Ga0501067_0010533_643_2766 683
223 3300049588 Ga0501072_0043307 Ga0501072_0043307_1331_3454 683
224 3300049742 Ga0501080_0014654 Ga0501080_0014654_693_2816 683
225 3300049822 Ga0501035_0074318 Ga0501035_0074318_388_2511 683
226 3300054114 Ga0501084_0034318 Ga0501084_0034318_1724_3847 683
227 3300060353 Ga0501082_0037084 Ga0501082_0037084_823_2946 683
228 3300006237 Ga0097621_100087207 Ga0097621_1000872073 684
229 3300046473 Ga0495582_0021689 Ga0495582_0021689_1321_3393 684
230 3300046683 Ga0495658_0019135 Ga0495658_0019135_150_2222 684
231 3300047673 Ga0495593_0046654 Ga0495593_0046654_130_2202 684
232 3300048089 Ga0495614_0017264 Ga0495614_0017264_961_3033 684
233 3300025912 Ga0207707_10116558 Ga0207707_101165581 685
234 3300048924 Ga0496121_0050182 Ga0496121_0050182_1308_3392 685
235 3300048929 Ga0496126_0011582 Ga0496126_0011582_5682_7766 685
236 3300031838 Ga0307518_10015128 Ga0307518_100151283 686
237 3300038727 Ga0400491_05987 Ga0400491_05987_492_2579 687
238 3300038735 Ga0400485_01586 Ga0400485_01586_1344_3431 687
239 3300038742 Ga0400486_25928 Ga0400486_25928_1355_3442 687
240 3300039110 Ga0400487_16901 Ga0400487_16901_1439_3526 687
241 3300039450 Ga0436363_0235724 Ga0436363_0235724_3967_6057 689
242 3300003322 rootL2_10171950 rootL2_101719503 690

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00239

Resolvase

Resolvase, N terminal domain

73

225

0.87

PF07508

Recombinase

Recombinase

247

365

0.83

PF13408

Zn_ribbon_recom

Recombinase zinc beta ribbon domain

383

443

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6amk-assembly1.cif.gz_A structure of streptomyces venezuelae bldc-whii opt complex 0.906 619 660
2f1m-assembly2.cif.gz_D conformational flexibility in the multidrug efflux system protein acra 0.8767 411 476
2f1m-assembly1.cif.gz_A conformational flexibility in the multidrug efflux system protein acra 0.846 411 476
2f1m-assembly1.cif.gz_B conformational flexibility in the multidrug efflux system protein acra 0.8441 412 476
5n6x-assembly1.cif.gz_A crystal structure of the legionella effector wipa 0.7522 398 498
ID Description Score Start End Superfamily
2f1mA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.8419 413 476 1.10.287.470
af_Q9TXS0_4_275_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.769 411 495 1.20.1270.60
af_K7KVG3_1_233_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.7596 418 505 1.20.1270.60
af_Q8IIV9_24_299_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.7355 400 515 1.20.1270.60
4i9qB04 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;B family DNA polymerase, finger domain 0.7297 406 494 1.10.287.690
ID Description Score Start End GO Terms
AF-A0A442PWJ8-F1-model_v4 deleted 0.9467 8 144
AF-T0YJN8-F1-model_v4 Resolvase domain protein 0.939 3 145 GO:0000150
GO:0003677
AF-A0A442PWJ8-F1-model_v4 deleted 0.9333 8 144
AF-T0YJN8-F1-model_v4 Resolvase domain protein 0.9327 3 145 GO:0000150
GO:0003677
AF-A0A526M558-F1-model_v4 Recombinase family protein 0.9257 145 272 GO:0000150
GO:0003677

Feature Viewer

pLDDT pTM Quality
83.02 0.53 Medium
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Predicted Structure (AlphaFold2)

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