F354839

General Info

Members Datasets Scaffolds Average Seq Length
242 127 484 165

Family's Representative Sequence

Representative Sequence 3300035119|Ga0373956_0394300|Ga0373956_0394300_46_642
Length 198
Sequence VHFVPPALRAGTSQRDIPTFFQREKIANVERVRPEWRMNFREKIIPWDKLPAWRAAIRASGKKLVVTNGCFDLLHLGHVTYLETARQCGDALLVGVNGDQATRELKGPGRPVNPELDRAAVLAALESVDGVCIFAEKTATRFLSAAQPDIYVKGGDYTLATLNQDERRTVEEAVGKIVLIPFVPGKSTTSLLKKIARL

Samples

Sample ID Description Type Environment
1 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
51 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
52 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
53 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
54 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
55 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
56 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
57 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
60 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
61 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
62 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
63 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
64 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
65 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
72 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
75 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
76 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
77 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
78 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
79 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
80 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
81 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
82 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
83 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
84 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
94 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
95 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
96 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
97 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
100 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
101 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
102 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
103 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
104 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
105 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
106 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
107 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
108 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
109 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
110 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
111 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
112 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
116 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
123 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
124 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.41
Rhizosphere 99.17
Stem 0
Stem Tuber 0
Unclassified 20.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373956_0394300 3300035119 Bacteria 660
2 rootH1_10161619 3300003323 Bacteria 2532
3 Ga0070666_10342594 3300005335 Bacteria 1068
4 Ga0068868_100537623 3300005338 Unclassified 1028
5 Ga0070689_100054825 3300005340 Bacteria 3087
6 Ga0070689_100155809 3300005340 Bacteria 1844
7 Ga0070689_100396091 3300005340 Unclassified 1166
8 Ga0070689_101174037 3300005340 Unclassified 688
9 Ga0070691_10144582 3300005341 Bacteria 1215
10 Ga0070691_10413532 3300005341 Bacteria 762
11 Ga0070688_100661888 3300005365 Bacteria 805
12 Ga0070667_100469364 3300005367 Bacteria 1151
13 Ga0070705_100125708 3300005440 Bacteria 1664
14 Ga0070681_10010296 3300005458 Bacteria 9228
15 Ga0070707_100307054 3300005468 Bacteria 1542
16 Ga0070707_100390155 3300005468 Bacteria 1352
17 Ga0070686_100168880 3300005544 Bacteria 1546
18 Ga0070686_101257842 3300005544 Bacteria 617
19 Ga0068855_100384226 3300005563 Bacteria 1541
20 Ga0068859_100442422 3300005617 Bacteria 1396
21 Ga0068859_101310041 3300005617 Bacteria 798
22 Ga0068864_100562691 3300005618 Bacteria 1103
23 Ga0068861_100707306 3300005719 Bacteria 937
24 Ga0068863_100509220 3300005841 Unclassified 1186
25 Ga0068863_100597210 3300005841 Bacteria 1092
26 Ga0068863_100746552 3300005841 Bacteria 974
27 Ga0068858_100202552 3300005842 Unclassified 1877
28 Ga0097621_100353027 3300006237 Bacteria 1308
29 Ga0097621_100574210 3300006237 Unclassified 1028
30 Ga0097621_100932043 3300006237 Bacteria 810
31 Ga0075430_100480229 3300006846 Bacteria 1025
32 Ga0075431_100025907 3300006847 Bacteria 6011
33 Ga0068865_101578973 3300006881 Unclassified 589
34 Ga0097620_100442386 3300006931 Bacteria 1396
35 Ga0097620_101309837 3300006931 Bacteria 798
36 Ga0105240_10378934 3300009093 Bacteria 1598
37 Ga0111539_10101800 3300009094 Bacteria 3372
38 Ga0111539_10500758 3300009094 Unclassified 1415
39 Ga0111539_10700627 3300009094 Bacteria 1179
40 Ga0111539_10714038 3300009094 Unclassified 1167
41 Ga0105245_10349585 3300009098 Unclassified 1464
42 Ga0105242_10015901 3300009176 Bacteria 5846
43 Ga0105238_10006356 3300009551 Bacteria 11749
44 Ga0105238_10106420 3300009551 Unclassified 2786
45 Ga0105239_11761708 3300010375 Unclassified 717
46 Ga0157370_10143103 3300013104 Unclassified 2228
47 Ga0157374_10095027 3300013296 Archaea 2849
48 Ga0157374_10215786 3300013296 Bacteria 1882
49 Ga0157374_11537515 3300013296 Bacteria 689
50 Ga0157378_10827827 3300013297 Unclassified 953
51 Ga0163162_11459077 3300013306 Bacteria 779
52 Ga0157372_10118489 3300013307 Unclassified 3038
53 Ga0157372_10235145 3300013307 Bacteria 2125
54 Ga0163163_10032082 3300014325 Bacteria 5074
55 Ga0163163_10426358 3300014325 Bacteria 1385
56 Ga0163163_11472307 3300014325 Bacteria 742
57 Ga0157379_10435161 3300014968 Bacteria 1209
58 Ga0157379_11205421 3300014968 Bacteria 728
59 Ga0157376_10705434 3300014969 Unclassified 1014
60 Ga0207699_10364401 3300025906 Unclassified 1023
61 Ga0207707_10036833 3300025912 Bacteria 4275
62 Ga0207695_10147188 3300025913 Bacteria 2298
63 Ga0207646_10359924 3300025922 Bacteria 1314
64 Ga0207646_10531699 3300025922 Bacteria 1058
65 Ga0207694_10046857 3300025924 Unclassified 3342
66 Ga0207664_10004980 3300025929 Bacteria 9030
67 Ga0207686_10024100 3300025934 Bacteria 3521
68 Ga0207670_10142336 3300025936 Bacteria 1769
69 Ga0207661_10447397 3300025944 Unclassified 1176
70 Ga0207667_10124885 3300025949 Bacteria 2650
71 Ga0207667_10140935 3300025949 Bacteria 2482
72 Ga0207667_10379411 3300025949 Bacteria 1440
73 Ga0207641_10584459 3300026088 Bacteria 1092
74 Ga0207641_11030956 3300026088 Bacteria 820
75 Ga0207676_10305974 3300026095 Bacteria 1453
76 Ga0265337_1000823 3300028556 Bacteria 16299
77 Ga0265326_10068254 3300028558 Bacteria 1005
78 Ga0265326_10128977 3300028558 Bacteria 720
79 Ga0265319_1003589 3300028563 Bacteria 8044
80 Ga0265319_1012923 3300028563 Bacteria 3348
81 Ga0265319_1037614 3300028563 Unclassified 1648
82 Ga0265319_1045079 3300028563 Bacteria 1475
83 Ga0265319_1088853 3300028563 Bacteria 976
84 Ga0265319_1110165 3300028563 Bacteria 861
85 Ga0265334_10015014 3300028573 Bacteria 3222
86 Ga0265334_10043301 3300028573 Bacteria 1752
87 Ga0265334_10048580 3300028573 Bacteria 1634
88 Ga0265318_10013386 3300028577 Bacteria 3468
89 Ga0265323_10002890 3300028653 Bacteria 7710
90 Ga0265323_10013724 3300028653 Bacteria 3223
91 Ga0265323_10048314 3300028653 Bacteria 1519
92 Ga0265322_10057922 3300028654 Bacteria 1099
93 Ga0265336_10032537 3300028666 Unclassified 1617
94 Ga0265338_10000101 3300028800 Bacteria 159323
95 Ga0265338_10000108 3300028800 Bacteria 152898
96 Ga0265338_10000184 3300028800 Bacteria 116834
97 Ga0265338_10000200 3300028800 Bacteria 113123
98 Ga0265338_10000263 3300028800 Bacteria 95638
99 Ga0265338_10000528 3300028800 Bacteria 67191
100 Ga0265338_10001238 3300028800 Bacteria 42063
101 Ga0265338_10001285 3300028800 Bacteria 41182
102 Ga0265338_10003230 3300028800 Bacteria 23216
103 Ga0265338_10015548 3300028800 Bacteria 8344
104 Ga0265338_10015808 3300028800 Bacteria 8263
105 Ga0265338_10018462 3300028800 Bacteria 7464
106 Ga0265338_10022435 3300028800 Bacteria 6535
107 Ga0265338_10070888 3300028800 Bacteria 2985
108 Ga0265338_10095826 3300028800 Bacteria 2436
109 Ga0265338_10103898 3300028800 Bacteria 2306
110 Ga0265338_10120039 3300028800 Unclassified 2098
111 Ga0265338_10143949 3300028800 Bacteria 1863
112 Ga0265338_10202238 3300028800 Bacteria 1497
113 Ga0265338_10356355 3300028800 Bacteria 1051
114 Ga0265338_10494110 3300028800 Bacteria 862
115 Ga0265324_10010505 3300029957 Unclassified 3564
116 Ga0265324_10055718 3300029957 Bacteria 1355
117 Ga0265324_10160448 3300029957 Unclassified 763
118 Ga0265324_10182591 3300029957 Bacteria 712
119 Ga0265330_10160864 3300031235 Bacteria 954
120 Ga0265330_10301824 3300031235 Bacteria 675
121 Ga0265332_10077328 3300031238 Bacteria 1414
122 Ga0265332_10160248 3300031238 Bacteria 940
123 Ga0265320_10000259 3300031240 Bacteria 43696
124 Ga0265320_10000389 3300031240 Bacteria 35533
125 Ga0265320_10003415 3300031240 Bacteria 10689
126 Ga0265320_10079938 3300031240 Bacteria 1527
127 Ga0265320_10376880 3300031240 Bacteria 627
128 Ga0265325_10240912 3300031241 Bacteria 822
129 Ga0265329_10000231 3300031242 Bacteria 29676
130 Ga0265340_10000287 3300031247 Bacteria 26530
131 Ga0265340_10008423 3300031247 Bacteria 5571
132 Ga0265339_10069521 3300031249 Bacteria 1879
133 Ga0265339_10075898 3300031249 Bacteria 1784
134 Ga0265331_10197750 3300031250 Unclassified 906
135 Ga0265316_10013629 3300031344 Bacteria 7212
136 Ga0265316_10034537 3300031344 Bacteria 4106
137 Ga0265316_10091902 3300031344 Bacteria 2314
138 Ga0265316_10119723 3300031344 Bacteria 1989
139 Ga0265313_10041152 3300031595 Bacteria 2279
140 Ga0265314_10000204 3300031711 Bacteria 87311
141 Ga0265314_10177939 3300031711 Bacteria 1277
142 Ga0265342_10412106 3300031712 Unclassified 697
143 Ga0316576_10306825 3300031727 Unclassified 1186
144 Ga0307412_10608939 3300031911 Unclassified 926
145 Ga0307411_10300165 3300032005 Unclassified 1287
146 Ga0373934_0276887 3300035086 Bacteria 695
147 Ga0373951_0050190 3300035091 Bacteria 1025
148 Ga0373936_0080662 3300035113 Bacteria 1354
149 Ga0373953_0091908 3300035117 Bacteria 1270
150 Ga0373954_0008252 3300035118 Bacteria 4567
151 Ga0373954_0064974 3300035118 Unclassified 1726
152 Ga0373956_0002059 3300035119 Bacteria 8329
153 Ga0373955_0210005 3300035172 Unclassified 1161
154 Ga0373924_0154841 3300035410 Bacteria 1004
155 Ga0373931_0987446 3300035691 Bacteria 569
156 Ga0373933_0361700 3300035724 Bacteria 944
157 Ga0373947_0134097 3300035725 Unclassified 1583
158 Ga0373947_1089068 3300035725 Bacteria 545
159 Ga0373937_0002281 3300036401 Bacteria 16020
160 Ga0373937_0230092 3300036401 Bacteria 1746
161 Ga0316582_0914097 3300036647 Unclassified 600
162 Ga0451577_0111662 3300042876 Bacteria 2446
163 Ga0451577_0158919 3300042876 Bacteria 2035
164 Ga0451577_0580512 3300042876 Unclassified 1017
165 Ga0451577_1061293 3300042876 Unclassified 726
166 Ga0453684_0005123 3300044712 Bacteria 26390
167 Ga0453684_0020287 3300044712 Bacteria 10038
168 Ga0451576_0025152 3300045051 Bacteria 6418
169 Ga0451576_0054110 3300045051 Bacteria 4203
170 Ga0451576_0152888 3300045051 Bacteria 2407
171 Ga0451576_0207456 3300045051 Bacteria 2046
172 Ga0451576_0227801 3300045051 Bacteria 1946
173 Ga0451576_1309572 3300045051 Unclassified 755
174 Ga0451576_1550338 3300045051 Unclassified 688
175 Ga0451576_1588125 3300045051 Bacteria 679
176 Ga0495592_0000071 3300046454 Bacteria 92699
177 Ga0495629_0362871 3300046459 Bacteria 987
178 Ga0495651_0468802 3300046462 Bacteria 811
179 Ga0495582_0372767 3300046473 Bacteria 822
180 Ga0495662_0049189 3300046476 Bacteria 2035
181 Ga0495662_0060842 3300046476 Unclassified 1824
182 Ga0495664_0152444 3300046477 Unclassified 1402
183 Ga0495664_0505906 3300046477 Unclassified 721
184 Ga0495608_0321108 3300046511 Bacteria 957
185 Ga0495608_0343685 3300046511 Unclassified 919
186 Ga0495618_0000825 3300046514 Bacteria 21567
187 Ga0495618_0094970 3300046514 Bacteria 1906
188 Ga0495618_0128118 3300046514 Bacteria 1625
189 Ga0495628_0004939 3300046516 Bacteria 11727
190 Ga0495628_1000622 3300046516 Unclassified 575
191 Ga0495630_0000049 3300046517 Bacteria 97884
192 Ga0495630_0014684 3300046517 Bacteria 5710
193 Ga0495630_0121185 3300046517 Bacteria 1984
194 Ga0495630_0223391 3300046517 Bacteria 1438
195 Ga0495630_0329730 3300046517 Unclassified 1167
196 Ga0495630_0333359 3300046517 Bacteria 1160
197 Ga0495666_0010145 3300046526 Bacteria 4699
198 Ga0495666_0091103 3300046526 Bacteria 1439
199 Ga0495652_0105049 3300046529 Bacteria 2283
200 Ga0495652_0322630 3300046529 Bacteria 1115
201 Ga0495640_0876674 3300046533 Bacteria 532
202 Ga0495586_0000185 3300046535 Bacteria 41119
203 Ga0495586_0000414 3300046535 Bacteria 25855
204 Ga0495586_0000437 3300046535 Bacteria 25052
205 Ga0495586_0076159 3300046535 Bacteria 1838
206 Ga0495645_0005640 3300046543 Bacteria 8616
207 Ga0495645_0041889 3300046543 Bacteria 3339
208 Ga0495645_0676726 3300046543 Bacteria 628
209 Ga0495622_0003435 3300046557 Bacteria 7467
210 Ga0495667_0016850 3300046559 Bacteria 4934
211 Ga0495667_0032725 3300046559 Bacteria 3482
212 Ga0495634_0002760 3300046642 Bacteria 14418
213 Ga0495634_0169668 3300046642 Bacteria 1372
214 Ga0495599_0096888 3300046678 Bacteria 1839
215 Ga0495599_0200810 3300046678 Bacteria 1225
216 Ga0495658_0005775 3300046683 Bacteria 6079
217 Ga0495613_0000360 3300046689 Bacteria 40275
218 Ga0495613_0017938 3300046689 Bacteria 5275
219 Ga0495613_0253112 3300046689 Bacteria 1229
220 Ga0495600_0400544 3300046809 Unclassified 854
221 Ga0495581_0019024 3300047315 Bacteria 3985
222 Ga0495581_0431748 3300047315 Unclassified 768
223 Ga0495674_0002484 3300047319 Bacteria 17985
224 Ga0495674_0073350 3300047319 Unclassified 2951
225 Ga0495674_0284464 3300047319 Unclassified 1354
226 Ga0495680_0001748 3300047322 Bacteria 23055
227 Ga0495680_0203471 3300047322 Bacteria 1419
228 Ga0495614_0152668 3300048089 Bacteria 1031
229 Ga0495615_0206686 3300048090 Bacteria 608
230 Ga0496112_1581465 3300048915 Bacteria 569
231 Ga0501034_0047050 3300049571 Bacteria 4358
232 Ga0501034_0079916 3300049571 Bacteria 3274
233 Ga0501036_0952963 3300049572 Bacteria 703
234 Ga0501043_0055004 3300049579 Bacteria 3126
235 Ga0501047_0374378 3300049581 Bacteria 1259
236 Ga0501239_016915 3300049672 Unclassified 865
237 Ga0501261_076896 3300049690 Bacteria 596
238 nmdc:mga0qj67_317663_c1 3300050509 Bacteria 1261
239 nmdc:mga06r32_84782_c1 3300050510 Unclassified 3089
240 nmdc:mga08y16_456462_c1 3300050511 Bacteria 1303
241 nmdc:mga08y16_909648_c1 3300050511 Bacteria 865
242 Ga0495619_0878680 3300053085 Unclassified 604
243 Ga0373956_0394300
244 rootH1_10161619
245 Ga0070666_10342594
246 Ga0068868_100537623
247 Ga0070689_100054825
248 Ga0070689_100155809
249 Ga0070689_100396091
250 Ga0070689_101174037
251 Ga0070691_10144582
252 Ga0070691_10413532
253 Ga0070688_100661888
254 Ga0070667_100469364
255 Ga0070705_100125708
256 Ga0070681_10010296
257 Ga0070707_100307054
258 Ga0070707_100390155
259 Ga0070686_100168880
260 Ga0070686_101257842
261 Ga0068855_100384226
262 Ga0068859_100442422
263 Ga0068859_101310041
264 Ga0068864_100562691
265 Ga0068861_100707306
266 Ga0068863_100509220
267 Ga0068863_100597210
268 Ga0068863_100746552
269 Ga0068858_100202552
270 Ga0097621_100353027
271 Ga0097621_100574210
272 Ga0097621_100932043
273 Ga0075430_100480229
274 Ga0075431_100025907
275 Ga0068865_101578973
276 Ga0097620_100442386
277 Ga0097620_101309837
278 Ga0105240_10378934
279 Ga0111539_10101800
280 Ga0111539_10500758
281 Ga0111539_10700627
282 Ga0111539_10714038
283 Ga0105245_10349585
284 Ga0105242_10015901
285 Ga0105238_10006356
286 Ga0105238_10106420
287 Ga0105239_11761708
288 Ga0157370_10143103
289 Ga0157374_10095027
290 Ga0157374_10215786
291 Ga0157374_11537515
292 Ga0157378_10827827
293 Ga0163162_11459077
294 Ga0157372_10118489
295 Ga0157372_10235145
296 Ga0163163_10032082
297 Ga0163163_10426358
298 Ga0163163_11472307
299 Ga0157379_10435161
300 Ga0157379_11205421
301 Ga0157376_10705434
302 Ga0207699_10364401
303 Ga0207707_10036833
304 Ga0207695_10147188
305 Ga0207646_10359924
306 Ga0207646_10531699
307 Ga0207694_10046857
308 Ga0207664_10004980
309 Ga0207686_10024100
310 Ga0207670_10142336
311 Ga0207661_10447397
312 Ga0207667_10124885
313 Ga0207667_10140935
314 Ga0207667_10379411
315 Ga0207641_10584459
316 Ga0207641_11030956
317 Ga0207676_10305974
318 Ga0265337_1000823
319 Ga0265326_10068254
320 Ga0265326_10128977
321 Ga0265319_1003589
322 Ga0265319_1012923
323 Ga0265319_1037614
324 Ga0265319_1045079
325 Ga0265319_1088853
326 Ga0265319_1110165
327 Ga0265334_10015014
328 Ga0265334_10043301
329 Ga0265334_10048580
330 Ga0265318_10013386
331 Ga0265323_10002890
332 Ga0265323_10013724
333 Ga0265323_10048314
334 Ga0265322_10057922
335 Ga0265336_10032537
336 Ga0265338_10000101
337 Ga0265338_10000108
338 Ga0265338_10000184
339 Ga0265338_10000200
340 Ga0265338_10000263
341 Ga0265338_10000528
342 Ga0265338_10001238
343 Ga0265338_10001285
344 Ga0265338_10003230
345 Ga0265338_10015548
346 Ga0265338_10015808
347 Ga0265338_10018462
348 Ga0265338_10022435
349 Ga0265338_10070888
350 Ga0265338_10095826
351 Ga0265338_10103898
352 Ga0265338_10120039
353 Ga0265338_10143949
354 Ga0265338_10202238
355 Ga0265338_10356355
356 Ga0265338_10494110
357 Ga0265324_10010505
358 Ga0265324_10055718
359 Ga0265324_10160448
360 Ga0265324_10182591
361 Ga0265330_10160864
362 Ga0265330_10301824
363 Ga0265332_10077328
364 Ga0265332_10160248
365 Ga0265320_10000259
366 Ga0265320_10000389
367 Ga0265320_10003415
368 Ga0265320_10079938
369 Ga0265320_10376880
370 Ga0265325_10240912
371 Ga0265329_10000231
372 Ga0265340_10000287
373 Ga0265340_10008423
374 Ga0265339_10069521
375 Ga0265339_10075898
376 Ga0265331_10197750
377 Ga0265316_10013629
378 Ga0265316_10034537
379 Ga0265316_10091902
380 Ga0265316_10119723
381 Ga0265313_10041152
382 Ga0265314_10000204
383 Ga0265314_10177939
384 Ga0265342_10412106
385 Ga0316576_10306825
386 Ga0307412_10608939
387 Ga0307411_10300165
388 Ga0373934_0276887
389 Ga0373951_0050190
390 Ga0373936_0080662
391 Ga0373953_0091908
392 Ga0373954_0008252
393 Ga0373954_0064974
394 Ga0373956_0002059
395 Ga0373955_0210005
396 Ga0373924_0154841
397 Ga0373931_0987446
398 Ga0373933_0361700
399 Ga0373947_0134097
400 Ga0373947_1089068
401 Ga0373937_0002281
402 Ga0373937_0230092
403 Ga0316582_0914097
404 Ga0451577_0111662
405 Ga0451577_0158919
406 Ga0451577_0580512
407 Ga0451577_1061293
408 Ga0453684_0005123
409 Ga0453684_0020287
410 Ga0451576_0025152
411 Ga0451576_0054110
412 Ga0451576_0152888
413 Ga0451576_0207456
414 Ga0451576_0227801
415 Ga0451576_1309572
416 Ga0451576_1550338
417 Ga0451576_1588125
418 Ga0495592_0000071
419 Ga0495629_0362871
420 Ga0495651_0468802
421 Ga0495582_0372767
422 Ga0495662_0049189
423 Ga0495662_0060842
424 Ga0495664_0152444
425 Ga0495664_0505906
426 Ga0495608_0321108
427 Ga0495608_0343685
428 Ga0495618_0000825
429 Ga0495618_0094970
430 Ga0495618_0128118
431 Ga0495628_0004939
432 Ga0495628_1000622
433 Ga0495630_0000049
434 Ga0495630_0014684
435 Ga0495630_0121185
436 Ga0495630_0223391
437 Ga0495630_0329730
438 Ga0495630_0333359
439 Ga0495666_0010145
440 Ga0495666_0091103
441 Ga0495652_0105049
442 Ga0495652_0322630
443 Ga0495640_0876674
444 Ga0495586_0000185
445 Ga0495586_0000414
446 Ga0495586_0000437
447 Ga0495586_0076159
448 Ga0495645_0005640
449 Ga0495645_0041889
450 Ga0495645_0676726
451 Ga0495622_0003435
452 Ga0495667_0016850
453 Ga0495667_0032725
454 Ga0495634_0002760
455 Ga0495634_0169668
456 Ga0495599_0096888
457 Ga0495599_0200810
458 Ga0495658_0005775
459 Ga0495613_0000360
460 Ga0495613_0017938
461 Ga0495613_0253112
462 Ga0495600_0400544
463 Ga0495581_0019024
464 Ga0495581_0431748
465 Ga0495674_0002484
466 Ga0495674_0073350
467 Ga0495674_0284464
468 Ga0495680_0001748
469 Ga0495680_0203471
470 Ga0495614_0152668
471 Ga0495615_0206686
472 Ga0496112_1581465
473 Ga0501034_0047050
474 Ga0501034_0079916
475 Ga0501036_0952963
476 Ga0501043_0055004
477 Ga0501047_0374378
478 Ga0501239_016915
479 Ga0501261_076896
480 nmdc:mga0qj67_317663_c1
481 nmdc:mga06r32_84782_c1
482 nmdc:mga08y16_456462_c1
483 nmdc:mga08y16_909648_c1
484 Ga0495619_0878680

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01467

CTP_transf_like

Cytidylyltransferase-like

66

193

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xf2-assembly1.cif.gz_A crystal structure of semet-hldc from burkholderia pseudomallei 0.932 1 144
5xf2-assembly1.cif.gz_A crystal structure of semet-hldc from burkholderia pseudomallei 0.9131 1 144
5x9q-assembly1.cif.gz_B crystal structure of hldc from burkholderia pseudomallei 0.8859 1 159
1n1d-assembly1.cif.gz_A glycerol-3-phosphate cytidylyltransferase complexed with cdp-glycerol 0.8858 26 157
5x3d-assembly1.cif.gz_A-2 crystal structure of hep-cmp-bound form of cytidylyltransferase (cytase) domain of fom1 from streptomyces wedmorensis 0.8715 25 149
ID Description Score Start End Superfamily
af_P76658_320_476_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9623 7 160 3.40.50.620
af_P76658_320_476_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9266 7 160 3.40.50.620
1cozA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8987 26 157 3.40.50.620
1cozA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8788 26 157 3.40.50.620
3glvB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.846 24 146 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A2E5EJH2-F1-model_v4 ADP-heptose synthase 0.9948 30 159 GO:0003824
GO:0009058
AF-A0A7C3AQ78-F1-model_v4 ADP-heptose synthase 0.9938 7 117 GO:0003824
GO:0009058
AF-A0A6M1RR23-F1-model_v4 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase (EC 2.7.7.70) 0.9928 1 160 GO:0005524
GO:0005975
GO:0009058
GO:0016773
GO:0016779
AF-A0A3C1V8M3-F1-model_v4 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase (EC 2.7.7.70) 0.9924 1 161 GO:0005524
GO:0005975
GO:0009058
GO:0016773
GO:0016779
AF-A0A3C1V8M3-F1-model_v4 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase (EC 2.7.7.70) 0.9863 1 161 GO:0005524
GO:0005975
GO:0009058
GO:0016773
GO:0016779

Map