F354586

General Info

Members Datasets Scaffolds Average Seq Length
242 170 215 437

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10010695|Ga0105240_100106955
Length 472
Sequence MDDGTRNDQRSSSNERGRAAAIPLISREPRAMNQLAASPNSEYARRRKQLMRMAGDDAILILPAAPPRIRSNDTHYGYRQDSDFWYLTGFNEPEAVLVLVPGRTHGEALLFCRERDPAREAWDGPRAGTEGAVAEFGFDDAYPISDLDDILPGLLEGRSRVYYHFGRDTEFDLKLIGWVNRVRAQVKQGAQPPHEFLELGHYLHELRLFKSRDELRLMRRAAQIAAEAHVVAMRAARPGMHEYEVEAAILHHFRRHDAQLAYESIVGGGANACVLHYIANKSQLRDGDLLLIDAGAEYRNYASDITRTFPINGRYSKEQRAIYQLVLDAQHAALAEARTGRTYDAGHNAAVATLTEGLLKLGLLKGTLEKNLASGDYKRFYMHKTGHWIGLDVHDVGEYRIDGAFRELEPGMVFTIEPGLYIAPGSKGVAAKWQGIGVRIEDDVLVTRDGYEVITSGVPKEIDEVEALLAAR

Samples

Sample ID Description Type Environment
1 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
2 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
3 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
4 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
5 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
6 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
7 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
8 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
9 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
10 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
11 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
12 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
13 2891633521 Azoarcus rhizosphaerae CC-YHH848 Isolate Rhizosphere
14 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
15 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
16 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
17 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
18 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
19 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
20 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
21 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
22 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
23 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
24 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
25 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
26 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
27 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
28 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
29 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
30 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
31 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
32 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
33 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
34 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
35 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
36 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
37 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
38 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
39 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
40 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
41 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
42 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
43 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
44 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
45 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
46 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
47 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
48 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
49 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
52 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
53 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
54 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
55 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
56 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
57 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
58 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
74 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
75 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
76 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
83 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
103 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
104 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
105 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
106 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
107 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
108 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
109 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
110 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
111 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
112 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
113 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
114 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
115 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
116 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
117 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
118 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
124 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
125 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
126 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
127 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
128 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
129 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
132 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
133 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
134 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
135 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
136 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
140 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
141 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
142 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
143 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
148 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
149 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
168 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
169 639633007 Azoarcus olearius BH72 Isolate Unclassified
170 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.43
Metatranscriptomes 0
Isolates 11.57

Biome Distribution

Category Percentage (%)
Aerial Root 0.41
Bulb 0
Endosphere 25.21
Nodule 0.41
Rhizoplane 1.65
Rhizosphere 57.85
Stem 0
Stem Tuber 0
Unclassified 14.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1001190 3300002773 Bacteria 11974
2 JGI25150J39212_1000714 3300002774 Bacteria 11902
3 JGI25151J46595_10000105 3300003187 Bacteria 113763
4 JGI25153J46596_10000077 3300003215 Bacteria 113763
5 rootH2_10003770 3300003320 Bacteria 3710
6 rootH2_10165672 3300003320 Bacteria 3805
7 rootH1_10018881 3300003323 Bacteria 66058
8 rootH1_10033719 3300003316 Bacteria 3762
9 rootH1_10033719 3300003323 Bacteria 3802
10 Ga0055526_1000316 3300003771 Bacteria 40300
11 Ga0055537_1000238 3300003773 Bacteria 40300
12 Ga0055537_1000526 3300003773 Bacteria 22324
13 Ga0055524_1000074 3300003775 Bacteria 122843
14 Ga0055524_1011724 3300003775 Bacteria 3407
15 Ga0055536_1003533 3300003781 Bacteria 8368
16 Ga0055536_1011352 3300003781 Bacteria 3423
17 Ga0055536_1015542 3300003781 Bacteria 2598
18 Ga0055534_1000121 3300003784 Bacteria 57849
19 Ga0055534_1000231 3300003784 Bacteria 40300
20 Ga0055528_1000028 3300003790 Bacteria 122843
21 Ga0055528_1000148 3300003790 Bacteria 57842
22 Ga0055530_10001387 3300003791 Bacteria 17936
23 Ga0055531_10005681 3300003794 Bacteria 7240
24 Ga0055531_10016652 3300003794 Bacteria 3157
25 Ga0055531_10018186 3300003794 Bacteria 2917
26 Ga0055531_10019024 3300003794 Bacteria 2803
27 Ga0058692_1000013 3300003856 Bacteria 316299
28 Ga0070682_100047939 3300005337 Bacteria 2658
29 Ga0068868_100036857 3300005338 Bacteria 3788
30 Ga0068868_100079468 3300005338 Bacteria 2627
31 Ga0070671_100013753 3300005355 Bacteria 6529
32 Ga0070688_100105825 3300005365 Bacteria 1863
33 Ga0070659_100193513 3300005366 Bacteria 1672
34 Ga0070700_100094763 3300005441 Bacteria 1955
35 Ga0070678_100012921 3300005456 Bacteria 5214
36 Ga0070681_10012559 3300005458 Bacteria 8404
37 Ga0068853_100005566 3300005539 Bacteria 9888
38 Ga0070693_100002680 3300005547 Bacteria 8190
39 Ga0070665_100045212 3300005548 Bacteria 4422
40 Ga0070665_100130672 3300005548 Bacteria 2513
41 Ga0070665_100131762 3300005548 Bacteria 2502
42 Ga0070665_100270114 3300005548 Bacteria 1702
43 Ga0068857_100023233 3300005577 Bacteria 5457
44 Ga0068859_100010002 3300005617 Bacteria 9566
45 Ga0068863_100032666 3300005841 Bacteria 4959
46 Ga0068863_100197482 3300005841 Bacteria 1934
47 Ga0068858_100010998 3300005842 Bacteria 8553
48 Ga0081539_10069980 3300005985 Bacteria 1885
49 Ga0075364_10001855 3300006051 Bacteria 11727
50 Ga0097621_100047526 3300006237 Bacteria 3478
51 Ga0068871_100007107 3300006358 Bacteria 7982
52 Ga0097620_100010002 3300006931 Bacteria 9566
53 Ga0105240_10010695 3300009093 Bacteria 12875
54 Ga0105248_10003290 3300009177 Bacteria 17934
55 Ga0105248_10036530 3300009177 Bacteria 5495
56 Ga0105239_10050315 3300010375 Bacteria 4571
57 Ga0105239_10060061 3300010375 Bacteria 4172
58 Ga0157373_10090568 3300013100 Bacteria 2154
59 Ga0157371_10021641 3300013102 Bacteria 4718
60 Ga0157371_10093058 3300013102 Bacteria 2136
61 Ga0157369_10151102 3300013105 Bacteria 2454
62 Ga0157374_10233235 3300013296 Bacteria 1808
63 Ga0157375_10005122 3300013308 Bacteria 11378
64 Ga0157375_10021298 3300013308 Bacteria 5941
65 Ga0157377_10034498 3300014745 Bacteria 2768
66 Ga0157379_10228136 3300014968 Bacteria 1688
67 Ga0157376_10032879 3300014969 Bacteria 4169
68 Ga0183360_10005 3300015689 Bacteria 73748
69 Ga0207425_1000045 3300025245 Bacteria 194257
70 Ga0209129_1000057 3300025258 Bacteria 253632
71 Ga0209565_1000023 3300025263 Bacteria 388244
72 Ga0209565_1000034 3300025263 Bacteria 312950
73 Ga0209673_1000039 3300025273 Bacteria 312950
74 Ga0209673_1000047 3300025273 Bacteria 289276
75 Ga0209673_1018316 3300025273 Bacteria 2550
76 Ga0209675_1000016 3300025291 Bacteria 391965
77 Ga0209675_1000023 3300025291 Bacteria 312950
78 Ga0209676_1001906 3300025292 Bacteria 16963
79 Ga0209676_1002607 3300025292 Bacteria 12359
80 Ga0209676_1002892 3300025292 Bacteria 11271
81 Ga0209676_1003387 3300025292 Bacteria 9893
82 Ga0209676_1005314 3300025292 Bacteria 6786
83 Ga0209676_1007422 3300025292 Bacteria 5149
84 Ga0209025_1000013 3300025294 Bacteria 871757
85 Ga0209025_1002899 3300025294 Bacteria 17122
86 Ga0209025_1004610 3300025294 Bacteria 11792
87 Ga0209564_1000066 3300025295 Bacteria 312899
88 Ga0209564_1000194 3300025295 Bacteria 141518
89 Ga0209564_1007799 3300025295 Bacteria 5434
90 Ga0209758_1000014 3300025297 Bacteria 871757
91 Ga0209050_1002178 3300025298 Bacteria 17699
92 Ga0209050_1018105 3300025298 Bacteria 2758
93 Ga0209050_1021283 3300025298 Bacteria 2370
94 Ga0209256_1000048 3300025299 Bacteria 312899
95 Ga0209256_1000825 3300025299 Bacteria 39320
96 Ga0209256_1006430 3300025299 Bacteria 6227
97 Ga0209051_1011034 3300025303 Bacteria 4502
98 Ga0209257_1000198 3300025304 Bacteria 149013
99 Ga0209257_1001577 3300025304 Bacteria 26294
100 Ga0209257_1001627 3300025304 Bacteria 25721
101 Ga0209257_1003668 3300025304 Bacteria 12861
102 Ga0209257_1005716 3300025304 Bacteria 8533
103 Ga0209257_1013418 3300025304 Bacteria 3646
104 Ga0207707_10027772 3300025912 Bacteria 4947
105 Ga0207695_10014462 3300025913 Bacteria 9346
106 Ga0207657_10002483 3300025919 Bacteria 19936
107 Ga0207681_10180481 3300025923 Bacteria 1608
108 Ga0207659_10145699 3300025926 Bacteria 1844
109 Ga0207644_10002045 3300025931 Bacteria 13061
110 Ga0207711_10002250 3300025941 Bacteria 17309
111 Ga0207689_10002409 3300025942 Bacteria 17406
112 Ga0207677_10030898 3300026023 Bacteria 3425
113 Ga0207703_10020640 3300026035 Bacteria 5153
114 Ga0207639_10005193 3300026041 Bacteria 8785
115 Ga0207639_10235834 3300026041 Bacteria 1588
116 Ga0207674_10032783 3300026116 Bacteria 5445
117 Ga0209371_1000007 3300027312 Bacteria 1050654
118 Ga0268266_10052922 3300028379 Bacteria 3487
119 Ga0268265_10060499 3300028380 Bacteria 2903
120 Ga0268256_1000008 3300030500 Bacteria 1050654
121 Ga0265332_10006650 3300031238 Bacteria 5235
122 Ga0265328_10000830 3300031239 Bacteria 14286
123 Ga0265331_10000138 3300031250 Bacteria 96032
124 Ga0265331_10013237 3300031250 Bacteria 4443
125 Ga0265327_10000002 3300031251 Bacteria 856593
126 Ga0265327_10000299 3300031251 Bacteria 96033
127 Ga0265327_10009432 3300031251 Bacteria 7045
128 Ga0265316_10073181 3300031344 Bacteria 2640
129 Ga0307408_100000279 3300031548 Bacteria 51312
130 Ga0307408_100150241 3300031548 Bacteria 1838
131 Ga0316578_10141000 3300031728 Bacteria 1452
132 Ga0307516_10046365 3300031730 Bacteria 4289
133 Ga0307413_10012420 3300031824 Bacteria 4240
134 Ga0307413_10023688 3300031824 Bacteria 3331
135 Ga0307410_10125344 3300031852 Bacteria 1879
136 Ga0307406_10013755 3300031901 Bacteria 4642
137 Ga0307412_10033266 3300031911 Bacteria 3275
138 Ga0307412_10129649 3300031911 Bacteria 1830
139 Ga0307414_10005546 3300032004 Bacteria 6959
140 Ga0307414_10009484 3300032004 Bacteria 5593
141 Ga0307414_10016916 3300032004 Bacteria 4449
142 Ga0307414_10037204 3300032004 Bacteria 3256
143 Ga0307414_10070606 3300032004 Bacteria 2515
144 Ga0316583_10002783 3300032133 Bacteria 6120
145 Ga0373956_0094290 3300035119 Bacteria 1383
146 Ga0373947_0107640 3300035725 Bacteria 1758
147 Ga0395899_0026958 3300037312 Bacteria 4334
148 Ga0395900_0126061 3300037418 Bacteria 2626
149 Ga0395905_0000337 3300037471 Bacteria 67116
150 Ga0395905_0020778 3300037471 Bacteria 6216
151 Ga0395901_0012508 3300038443 Bacteria 8612
152 Ga0439447_000227 3300041407 Bacteria 19837
153 Ga0439465_0001331 3300041413 Bacteria 7939
154 Ga0439432_002668 3300042006 Bacteria 6677
155 Ga0439449_0003768 3300042007 Bacteria 5868
156 Ga0439452_016278 3300042010 Bacteria 2022
157 Ga0450911_002879 3300042115 Bacteria 3209
158 Ga0451577_0005210 3300042876 Bacteria 13382
159 Ga0451576_0012705 3300045051 Bacteria 9453
160 Ga0495643_0001888 3300046522 Bacteria 17752
161 Ga0495656_0006171 3300046615 Bacteria 4190
162 Ga0495656_0017068 3300046615 Bacteria 2764
163 Ga0495668_0002539 3300046616 Bacteria 14886
164 Ga0495668_0052038 3300046616 Bacteria 2267
165 Ga0495636_0015763 3300047318 Bacteria 3013
166 Ga0495672_0000720 3300047320 Bacteria 36381
167 Ga0495686_0024029 3300047472 Bacteria 4008
168 Ga0496108_0209131 3300048911 Bacteria 1693
169 Ga0496109_0026551 3300048912 Bacteria 5165
170 Ga0496113_0012482 3300048916 Bacteria 5710
171 Ga0496114_0004841 3300048917 Bacteria 10491
172 Ga0496116_0004506 3300048919 Bacteria 13260
173 Ga0496117_0041898 3300048920 Bacteria 3348
174 Ga0496118_0007017 3300048921 Bacteria 12131
175 Ga0496118_0052968 3300048921 Bacteria 3089
176 Ga0496121_0006455 3300048924 Bacteria 14544
177 Ga0496121_0035176 3300048924 Bacteria 4494
178 Ga0496122_0007903 3300048925 Bacteria 11665
179 Ga0496122_0098136 3300048925 Bacteria 1968
180 Ga0496124_0002024 3300048927 Bacteria 27560
181 Ga0496124_0026817 3300048927 Bacteria 5186
182 Ga0496125_0001475 3300048928 Bacteria 34001
183 Ga0496125_0054663 3300048928 Bacteria 3260
184 Ga0496125_0055721 3300048928 Bacteria 3217
185 Ga0496126_0014986 3300048929 Bacteria 7816
186 Ga0501031_0014261 3300049568 Bacteria 5170
187 Ga0501032_0004160 3300049569 Bacteria 10961
188 Ga0501032_0006647 3300049569 Bacteria 8488
189 Ga0501033_0001107 3300049570 Bacteria 24458
190 Ga0501033_0002068 3300049570 Bacteria 17441
191 Ga0501034_0001232 3300049571 Bacteria 34779
192 Ga0501034_0012454 3300049571 Bacteria 8783
193 Ga0501034_0157666 3300049571 Bacteria 2243
194 Ga0501036_0203524 3300049572 Bacteria 1665
195 Ga0501037_0014530 3300049573 Bacteria 5791
196 Ga0501038_0003723 3300049574 Bacteria 14207
197 Ga0501039_0001491 3300049575 Bacteria 17220
198 Ga0501043_0002746 3300049579 Bacteria 14723
199 Ga0501043_0010306 3300049579 Bacteria 7328
200 Ga0501046_0004495 3300049580 Bacteria 12640
201 Ga0501048_0091463 3300049582 Bacteria 2146
202 Ga0501067_0057234 3300049583 Bacteria 2159
203 Ga0501073_0035724 3300049589 Bacteria 3530
204 Ga0501242_001062 3300049674 Bacteria 2676
205 Ga0501080_0061290 3300049742 Bacteria 3502
206 Ga0501280_000093 3300049776 Bacteria 23887
207 Ga0501035_0008148 3300049822 Bacteria 9765
208 Ga0501035_0041831 3300049822 Bacteria 4136
209 Ga0501044_0000035 3300049823 Bacteria 162042
210 Ga0501044_0066755 3300049823 Bacteria 3666
211 Ga0501044_0103779 3300049823 Bacteria 2857
212 nmdc:mga00v17_174238_c1 3300050491 Bacteria 1388
213 nmdc:mga00v17_41_c2 3300050491 Bacteria 55060
214 nmdc:mga00v17_45867_c1 3300050491 Bacteria 2642
215 Ga0500620_000979 3300053155 Bacteria 4997

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046615 Ga0495656_0017068 Ga0495656_0017068_1334_2665 375
2 3300047318 Ga0495636_0015763 Ga0495636_0015763_1595_2926 375
3 3300048911 Ga0496108_0209131 Ga0496108_0209131_340_1671 375
4 3300050491 nmdc:mga00v17_174238_c1 nmdc:mga00v17_174238_c1_91_1362 381
5 3300005337 Ga0070682_100047939 Ga0070682_1000479392 393
6 3300046616 Ga0495668_0052038 Ga0495668_0052038_125_1462 393
7 3300049570 Ga0501033_0002068 Ga0501033_0002068_6961_8283 393
8 3300015689 Ga0183360_10005 Ga0183360_1000527 395
9 3300032004 Ga0307414_10070606 Ga0307414_100706062 396
10 3300049571 Ga0501034_0001232 Ga0501034_0001232_6493_7818 398
11 3300050491 nmdc:mga00v17_45867_c1 nmdc:mga00v17_45867_c1_893_2215 398
12 3300031824 Ga0307413_10023688 Ga0307413_100236883 400
13 3300032004 Ga0307414_10005546 Ga0307414_100055465 400
14 3300003771 Ga0055526_1000316 Ga0055526_100031618 401
15 3300003773 Ga0055537_1000238 Ga0055537_100023818 401
16 3300003775 Ga0055524_1000074 Ga0055524_100007495 401
17 3300003784 Ga0055534_1000231 Ga0055534_100023118 401
18 3300003790 Ga0055528_1000028 Ga0055528_100002819 401
19 3300025263 Ga0209565_1000034 Ga0209565_1000034254 401
20 3300025273 Ga0209673_1000039 Ga0209673_1000039254 401
21 3300025291 Ga0209675_1000023 Ga0209675_1000023254 401
22 3300025295 Ga0209564_1000066 Ga0209564_100006619 401
23 3300025299 Ga0209256_1000048 Ga0209256_1000048254 401
24 3300041413 Ga0439465_0001331 Ga0439465_0001331_3520_4848 401
25 3300042007 Ga0439449_0003768 Ga0439449_0003768_915_2243 401
26 3300042010 Ga0439452_016278 Ga0439452_016278_334_1662 401
27 3300046615 Ga0495656_0006171 Ga0495656_0006171_1392_2720 401
28 3300005338 Ga0068868_100079468 Ga0068868_1000794682 403
29 3300005441 Ga0070700_100094763 Ga0070700_1000947631 403
30 3300005548 Ga0070665_100270114 Ga0070665_1002701141 403
31 3300031344 Ga0265316_10073181 Ga0265316_100731812 403
32 3300032133 Ga0316583_10002783 Ga0316583_100027834 403
33 3300045051 Ga0451576_0012705 Ga0451576_0012705_813_2111 403
34 3300005338 Ga0068868_100036857 Ga0068868_1000368573 404
35 3300005366 Ga0070659_100193513 Ga0070659_1001935132 404
36 3300005456 Ga0070678_100012921 Ga0070678_1000129215 404
37 3300005458 Ga0070681_10012559 Ga0070681_100125594 404
38 3300005539 Ga0068853_100005566 Ga0068853_1000055666 404
39 3300005548 Ga0070665_100045212 Ga0070665_1000452123 404
40 3300005577 Ga0068857_100023233 Ga0068857_1000232335 404
41 3300005617 Ga0068859_100010002 Ga0068859_1000100027 404
42 3300005841 Ga0068863_100032666 Ga0068863_1000326663 404
43 3300005842 Ga0068858_100010998 Ga0068858_1000109985 404
44 3300006237 Ga0097621_100047526 Ga0097621_1000475263 404
45 3300006358 Ga0068871_100007107 Ga0068871_1000071075 404
46 3300006931 Ga0097620_100010002 Ga0097620_1000100022 404
47 3300009177 Ga0105248_10036530 Ga0105248_100365305 404
48 3300010375 Ga0105239_10050315 Ga0105239_100503152 404
49 3300013308 Ga0157375_10021298 Ga0157375_100212983 404
50 3300014968 Ga0157379_10228136 Ga0157379_102281361 404
51 3300014969 Ga0157376_10032879 Ga0157376_100328793 404
52 3300025912 Ga0207707_10027772 Ga0207707_100277724 404
53 3300025923 Ga0207681_10180481 Ga0207681_101804812 404
54 3300025942 Ga0207689_10002409 Ga0207689_100024092 404
55 3300026023 Ga0207677_10030898 Ga0207677_100308983 404
56 3300026035 Ga0207703_10020640 Ga0207703_100206403 404
57 3300026041 Ga0207639_10005193 Ga0207639_100051936 404
58 3300026116 Ga0207674_10032783 Ga0207674_100327835 404
59 3300028380 Ga0268265_10060499 Ga0268265_100604992 404
60 3300035119 Ga0373956_0094290 Ga0373956_0094290_72_1373 404
61 3300035725 Ga0373947_0107640 Ga0373947_0107640_89_1390 404
62 3300049569 Ga0501032_0006647 Ga0501032_0006647_1502_2809 404
63 3300049572 Ga0501036_0203524 Ga0501036_0203524_38_1345 404
64 3300049776 Ga0501280_000093 Ga0501280_000093_20752_22065 404
65 iso_pu_bacteria 2524614729 2525558195 404
66 iso_pu_bacteria 2627854209 2630649998 404
67 iso_pu_bacteria 2738541276 2738713902 404
68 3300031239 Ga0265328_10000830 Ga0265328_100008309 405
69 3300031250 Ga0265331_10000138 Ga0265331_1000013885 405
70 3300031250 Ga0265331_10013237 Ga0265331_100132374 405
71 3300031251 Ga0265327_10000299 Ga0265327_100002999 405
72 3300031251 Ga0265327_10009432 Ga0265327_100094322 405
73 3300031728 Ga0316578_10141000 Ga0316578_101410002 405
74 3300005841 Ga0068863_100197482 Ga0068863_1001974822 406
75 3300032004 Ga0307414_10016916 Ga0307414_100169163 406
76 3300005365 Ga0070688_100105825 Ga0070688_1001058252 407
77 3300013296 Ga0157374_10233235 Ga0157374_102332351 407
78 3300014745 Ga0157377_10034498 Ga0157377_100344982 407
79 3300025926 Ga0207659_10145699 Ga0207659_101456992 407
80 3300026041 Ga0207639_10235834 Ga0207639_102358341 407
81 3300031238 Ga0265332_10006650 Ga0265332_100066503 407
82 3300048928 Ga0496125_0001475 Ga0496125_0001475_10016_11347 407
83 3300003320 rootH2_10165672 rootH2_101656722 408
84 3300003323 rootH1_10018881 rootH1_1001888122 408
85 3300031548 Ga0307408_100000279 Ga0307408_10000027932 408
86 3300031548 Ga0307408_100150241 Ga0307408_1001502412 408
87 3300031901 Ga0307406_10013755 Ga0307406_100137554 408
88 3300031911 Ga0307412_10129649 Ga0307412_101296492 408
89 iso_pu_bacteria 2643221581 2643914889 408
90 3300048924 Ga0496121_0006455 Ga0496121_0006455_13192_14532 409
91 3300049568 Ga0501031_0014261 Ga0501031_0014261_1284_2597 409
92 3300049569 Ga0501032_0004160 Ga0501032_0004160_1630_2943 409
93 3300049570 Ga0501033_0001107 Ga0501033_0001107_4130_5443 409
94 3300049571 Ga0501034_0012454 Ga0501034_0012454_3341_4654 409
95 3300049573 Ga0501037_0014530 Ga0501037_0014530_1870_3183 409
96 3300049574 Ga0501038_0003723 Ga0501038_0003723_4083_5396 409
97 3300049575 Ga0501039_0001491 Ga0501039_0001491_4276_5589 409
98 3300049579 Ga0501043_0010306 Ga0501043_0010306_4730_6043 409
99 3300049580 Ga0501046_0004495 Ga0501046_0004495_6170_7483 409
100 3300049583 Ga0501067_0057234 Ga0501067_0057234_724_2037 409
101 3300049589 Ga0501073_0035724 Ga0501073_0035724_1294_2607 409
102 3300049742 Ga0501080_0061290 Ga0501080_0061290_38_1351 409
103 3300049822 Ga0501035_0008148 Ga0501035_0008148_444_1757 409
104 3300049823 Ga0501044_0066755 Ga0501044_0066755_1644_2957 409
105 3300053155 Ga0500620_000979 Ga0500620_000979_2350_3663 409
106 3300042876 Ga0451577_0005210 Ga0451577_0005210_5522_6841 410
107 iso_pu_bacteria 2547132130 2547503286 410
108 iso_pu_bacteria 2747842428 2747951239 410
109 iso_pu_bacteria 2765235840 2765580344 410
110 iso_pu_bacteria 2816332141 2816518618 410
111 iso_pu_bacteria 2842391507 2842395497 410
112 iso_pu_bacteria 2874220319 2874223022 410
113 iso_pu_bacteria 2919089067 2919092931 410
114 iso_pu_bacteria 2919134579 2919137383 410
115 iso_pu_bacteria 2928496128 2928498918 410
116 iso_pu_bacteria 2931380184 2931383516 410
117 iso_pu_bacteria 2937610967 2937615002 410
118 iso_pu_bacteria 2939626828 2939630641 410
119 iso_pu_bacteria 2961047084 2961049787 410
120 iso_pu_bacteria 2961064222 2961066530 410
121 iso_pu_bacteria 8003014200 8003017025 410
122 3300031730 Ga0307516_10046365 Ga0307516_100463652 411
123 iso_pu_bacteria 2857442823 2857445726 411
124 iso_pu_bacteria 2891633521 2891634262 411
125 iso_pu_bacteria 2941489479 2941493839 411
126 3300003320 rootH2_10003770 rootH2_100037704 412
127 3300003323 rootH1_10033719 rootH1_100337195 412
128 3300003856 Ga0058692_1000013 Ga0058692_1000013136 412
129 3300005547 Ga0070693_100002680 Ga0070693_10000268010 412
130 3300005548 Ga0070665_100130672 Ga0070665_1001306722 412
131 3300005985 Ga0081539_10069980 Ga0081539_100699802 412
132 3300013100 Ga0157373_10090568 Ga0157373_100905682 412
133 3300013102 Ga0157371_10021641 Ga0157371_100216412 412
134 3300013102 Ga0157371_10093058 Ga0157371_100930581 412
135 3300013105 Ga0157369_10151102 Ga0157369_101511023 412
136 3300025298 Ga0209050_1021283 Ga0209050_10212831 412
137 3300027312 Ga0209371_1000007 Ga0209371_1000007816 412
138 3300028379 Ga0268266_10052922 Ga0268266_100529224 412
139 3300030500 Ga0268256_1000008 Ga0268256_1000008135 412
140 3300031852 Ga0307410_10125344 Ga0307410_101253442 412
141 3300031911 Ga0307412_10033266 Ga0307412_100332664 412
142 3300032004 Ga0307414_10037204 Ga0307414_100372041 412
143 3300037471 Ga0395905_0020778 Ga0395905_0020778_2762_4120 412
144 3300042115 Ga0450911_002879 Ga0450911_002879_1372_2700 412
145 3300048917 Ga0496114_0004841 Ga0496114_0004841_3916_5238 412
146 3300048919 Ga0496116_0004506 Ga0496116_0004506_2266_3594 412
147 3300048921 Ga0496118_0052968 Ga0496118_0052968_1134_2462 412
148 3300048924 Ga0496121_0035176 Ga0496121_0035176_1763_3091 412
149 3300048925 Ga0496122_0098136 Ga0496122_0098136_108_1436 412
150 3300048928 Ga0496125_0054663 Ga0496125_0054663_546_1874 412
151 3300048929 Ga0496126_0014986 Ga0496126_0014986_1168_2490 412
152 3300049571 Ga0501034_0157666 Ga0501034_0157666_775_2097 412
153 3300049674 Ga0501242_001062 Ga0501242_001062_129_1451 412
154 iso_pu_bacteria 2574179768 2574430434 412
155 iso_pu_bacteria 2939589442 2939589663 412
156 iso_pu_bacteria 2974307012 2974307782 412
157 iso_pu_bacteria 2977247770 2977248501 412
158 iso_pu_bacteria 2984514374 2984517012 412
159 iso_pu_bacteria 639633007 639788046 412
160 3300005355 Ga0070671_100013753 Ga0070671_1000137533 413
161 3300006051 Ga0075364_10001855 Ga0075364_1000185514 413
162 3300009093 Ga0105240_10010695 Ga0105240_100106955 413
163 3300009177 Ga0105248_10003290 Ga0105248_1000329010 413
164 3300010375 Ga0105239_10060061 Ga0105239_100600612 413
165 3300013308 Ga0157375_10005122 Ga0157375_100051223 413
166 3300025292 Ga0209676_1007422 Ga0209676_10074223 413
167 3300025294 Ga0209025_1004610 Ga0209025_10046103 413
168 3300025913 Ga0207695_10014462 Ga0207695_100144626 413
169 3300025919 Ga0207657_10002483 Ga0207657_100024835 413
170 3300025931 Ga0207644_10002045 Ga0207644_100020459 413
171 3300025941 Ga0207711_10002250 Ga0207711_1000225010 413
172 3300037312 Ga0395899_0026958 Ga0395899_0026958_2733_4094 413
173 3300037418 Ga0395900_0126061 Ga0395900_0126061_494_1837 413
174 3300037471 Ga0395905_0000337 Ga0395905_0000337_7264_8625 413
175 3300038443 Ga0395901_0012508 Ga0395901_0012508_5862_7223 413
176 3300048912 Ga0496109_0026551 Ga0496109_0026551_2905_4266 413
177 3300048916 Ga0496113_0012482 Ga0496113_0012482_2301_3662 413
178 3300048925 Ga0496122_0007903 Ga0496122_0007903_3572_4903 413
179 3300048927 Ga0496124_0002024 Ga0496124_0002024_16457_17788 413
180 3300048928 Ga0496125_0055721 Ga0496125_0055721_412_1743 413
181 3300049582 Ga0501048_0091463 Ga0501048_0091463_209_1690 413
182 3300049822 Ga0501035_0041831 Ga0501035_0041831_1288_2769 413
183 3300049823 Ga0501044_0000035 Ga0501044_0000035_77916_79397 413
184 3300049823 Ga0501044_0103779 Ga0501044_0103779_661_2055 413
185 3300050491 nmdc:mga00v17_41_c2 nmdc:mga00v17_41_c2_44491_45819 413
186 3300003773 Ga0055537_1000526 Ga0055537_100052626 414
187 3300003775 Ga0055524_1011724 Ga0055524_10117242 414
188 3300003781 Ga0055536_1003533 Ga0055536_10035333 414
189 3300003781 Ga0055536_1011352 Ga0055536_10113522 414
190 3300003781 Ga0055536_1015542 Ga0055536_10155422 414
191 3300003784 Ga0055534_1000121 Ga0055534_100012139 414
192 3300003790 Ga0055528_1000148 Ga0055528_100014817 414
193 3300003791 Ga0055530_10001387 Ga0055530_1000138711 414
194 3300003794 Ga0055531_10005681 Ga0055531_100056812 414
195 3300003794 Ga0055531_10016652 Ga0055531_100166521 414
196 3300003794 Ga0055531_10018186 Ga0055531_100181862 414
197 3300003794 Ga0055531_10019024 Ga0055531_100190242 414
198 3300005548 Ga0070665_100131762 Ga0070665_1001317623 414
199 3300025263 Ga0209565_1000023 Ga0209565_100002343 414
200 3300025273 Ga0209673_1000047 Ga0209673_1000047216 414
201 3300025273 Ga0209673_1018316 Ga0209673_10183162 414
202 3300025291 Ga0209675_1000016 Ga0209675_1000016149 414
203 3300025292 Ga0209676_1001906 Ga0209676_100190612 414
204 3300025292 Ga0209676_1002607 Ga0209676_10026074 414
205 3300025292 Ga0209676_1002892 Ga0209676_10028924 414
206 3300025292 Ga0209676_1003387 Ga0209676_10033879 414
207 3300025292 Ga0209676_1005314 Ga0209676_10053144 414
208 3300025294 Ga0209025_1002899 Ga0209025_10028995 414
209 3300025295 Ga0209564_1000194 Ga0209564_100019462 414
210 3300025295 Ga0209564_1007799 Ga0209564_10077993 414
211 3300025298 Ga0209050_1002178 Ga0209050_100217810 414
212 3300025298 Ga0209050_1018105 Ga0209050_10181052 414
213 3300025299 Ga0209256_1000825 Ga0209256_100082528 414
214 3300025299 Ga0209256_1006430 Ga0209256_10064303 414
215 3300025303 Ga0209051_1011034 Ga0209051_10110342 414
216 3300025304 Ga0209257_1000198 Ga0209257_100019810 414
217 3300025304 Ga0209257_1001577 Ga0209257_100157719 414
218 3300025304 Ga0209257_1001627 Ga0209257_100162719 414
219 3300025304 Ga0209257_1003668 Ga0209257_10036689 414
220 3300025304 Ga0209257_1005716 Ga0209257_10057163 414
221 3300025304 Ga0209257_1013418 Ga0209257_10134182 414
222 3300031251 Ga0265327_10000002 Ga0265327_10000002111 414
223 3300042006 Ga0439432_002668 Ga0439432_002668_1922_3256 414
224 3300046522 Ga0495643_0001888 Ga0495643_0001888_6054_7388 414
225 3300047320 Ga0495672_0000720 Ga0495672_0000720_34674_36008 414
226 3300047472 Ga0495686_0024029 Ga0495686_0024029_316_1650 414
227 3300048920 Ga0496117_0041898 Ga0496117_0041898_132_1466 414
228 3300048921 Ga0496118_0007017 Ga0496118_0007017_7796_9130 414
229 3300048927 Ga0496124_0026817 Ga0496124_0026817_1742_3076 414
230 3300049579 Ga0501043_0002746 Ga0501043_0002746_4635_5963 414
231 3300002773 JGI25152J39213_1001190 JGI25152J39213_100119015 415
232 3300002774 JGI25150J39212_1000714 JGI25150J39212_10007141 415
233 3300003187 JGI25151J46595_10000105 JGI25151J46595_1000010581 415
234 3300003215 JGI25153J46596_10000077 JGI25153J46596_1000007715 415
235 3300025245 Ga0207425_1000045 Ga0207425_100004581 415
236 3300025258 Ga0209129_1000057 Ga0209129_100005748 415
237 3300025294 Ga0209025_1000013 Ga0209025_1000013115 415
238 3300025297 Ga0209758_1000014 Ga0209758_1000014115 415
239 3300031824 Ga0307413_10012420 Ga0307413_100124203 415
240 3300032004 Ga0307414_10009484 Ga0307414_100094844 415
241 3300041407 Ga0439447_000227 Ga0439447_000227_12488_13822 415
242 3300046616 Ga0495668_0002539 Ga0495668_0002539_13256_14590 415

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05195

AMP_N

Aminopeptidase P, N-terminal domain

43

162

0.96

PF00557

Peptidase_M24

Metallopeptidase family M24

216

448

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fuk-assembly1.cif.gz_A aminopeptidase from trypanosoma brucei 0.723 195 412
3tb5-assembly2.cif.gz_B crystal structure of the enterococcus faecalis methionine aminopeptidase apo form 0.7189 195 401
4fuk-assembly1.cif.gz_B aminopeptidase from trypanosoma brucei 0.7072 190 410
3iu7-assembly1.cif.gz_A m. tuberculosis methionine aminopeptidase with mn inhibitor a02 0.7043 195 396
5yoh-assembly1.cif.gz_A mycobacterium tuberculosis methionine aminopeptidase type 1c (c105m mutant) in complex with methionine 0.7032 193 396
ID Description Score Start End Superfamily
5wzeD01 Alpha Beta;3-Layer(aba) Sandwich;Creatine Amidinohydrolase; Chain A, domain 1;Creatinase/prolidase N-terminal domain 0.9665 7 176 3.40.350.10
5wzeD01 Alpha Beta;3-Layer(aba) Sandwich;Creatine Amidinohydrolase; Chain A, domain 1;Creatinase/prolidase N-terminal domain 0.9448 7 176 3.40.350.10
1az9A01 Alpha Beta;3-Layer(aba) Sandwich;Creatine Amidinohydrolase; Chain A, domain 1;Creatinase/prolidase N-terminal domain 0.9349 7 176 3.40.350.10
1az9A01 Alpha Beta;3-Layer(aba) Sandwich;Creatine Amidinohydrolase; Chain A, domain 1;Creatinase/prolidase N-terminal domain 0.9143 7 176 3.40.350.10
af_Q54T46_248_518_3.90.230.10 Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily 0.8791 194 411 3.90.230.10
ID Description Score Start End GO Terms
AF-A0A521Y870-F1-model_v4 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.9746 7 113 GO:0005829
GO:0006508
GO:0030145
GO:0070006
AF-A0A3C1HQC7-F1-model_v4 deleted 0.9727 7 136
AF-A0A800CDB5-F1-model_v4 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.9724 7 154 GO:0005829
GO:0006508
GO:0030145
GO:0070006
AF-A0A2D5YFX7-F1-model_v4 deleted 0.9694 7 185
AF-A0A3C0C105-F1-model_v4 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.9686 10 147 GO:0005829
GO:0006508
GO:0030145
GO:0070006

Feature Viewer

pLDDT pTM Quality
80.67 0.56 Medium
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Predicted Structure (AlphaFold2)

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