F354550

General Info

Members Datasets Scaffolds Average Seq Length
242 162 484 899

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100002171|Ga0075428_1000021718
Length 935
Sequence MFQTILRKIIGSRNDRLVRQYARQVRAINALEPQMEKLSDADLAAKTEEFRKRVEERLAKIVDGAEDDPEAKTRRLLPEAFAVVREASRRTLNMRHFDVQMIGGIALHNGKIAEMRTGEGKTLVATLPAYLNALAGQSVHIVTVNDYLAQRDADWMGRIYRFLGLTVGVNLSRMEHDPKQAAYACDIVYGTNNEFGFDYLRDNMVYHLSEKVQPHLAYAIVDEVDSILIDEARTPLIISGQAEDTTDLYIRMNQVVPNLVRQKEEKEENSAGDYWVDEKQHQVILSEQGHEHAEELLEKAGLLPPNSSLYEPANIILMHHLNAALRAHTLFHRDQQYVVQGSEIIIVDEFTGRLMPGRRWSEGLHQAVEAKEGVEIQKENQTLATITFQNYFRLYKKLAGMTGTADTEAYEFQQIYGLETVVIPTHQKMIREDRMDQVYRTTREKHQAIINDIKECYERGQPVLVGTTSIENSELLSTMLKKDKLPHNVLNAKQHAREAEIVAQAGRPKMVTIATNMAGRGTDIVLGGNPEPEINRVMAEEAVDPAIRKKRAEEIRFDWQKLHNQVVAAGGLHITGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDPLLRIFASDRVAAIMERLKMPDGEAIEHPWVTRSIENAQRKVEARNFDMRKHLLEYDDVANDQRKVIYQQRNELLDSDDITETLNAMRVDVIAGHFEQCIPPESQEEQWDPAGLERVLEGELQLAVPVQQWLRDEPEMGEDALRNRLIEAAHARYREKVAQFDPVEIHRIERAIMLQSLDTHWREHLSALDALRQGIHLRGYAQKNPTQEYKREAFELFSSMLGLVKTEVTKVLMTVQFRSPEELAAVEEPEAPRNVQYQHTEFSPGIGDDAGEALAEIQRENEGEVAVAERPQPFVRGSQKVGRNDPCPCGSGKKYKQCHGRLT

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
67 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
100 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
105 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
106 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
114 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
115 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
118 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
150 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
156 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
157 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 2916178963 Pseudoalteromonas rhizosphaerae RA15 Isolate Rhizosphere
160 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
161 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified
162 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.35
Metatranscriptomes 0
Isolates 1.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.24
Nodule 0
Rhizoplane 3.72
Rhizosphere 94.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100002171 3300006844 Bacteria 21224
2 Ga0070683_100001287 3300005329 Bacteria 19089
3 Ga0070690_100000076 3300005330 Bacteria 48076
4 Ga0070690_100042310 3300005330 Bacteria 2885
5 Ga0070670_100038866 3300005331 Bacteria 4091
6 Ga0068869_100000361 3300005334 Bacteria 24438
7 Ga0068869_100001183 3300005334 Bacteria 15316
8 Ga0070660_100005619 3300005339 Bacteria 8691
9 Ga0070689_100005432 3300005340 Bacteria 8699
10 Ga0070689_100012771 3300005340 Bacteria 6062
11 Ga0070689_100014704 3300005340 Bacteria 5692
12 Ga0070661_100007248 3300005344 Bacteria 7647
13 Ga0070661_100029828 3300005344 Bacteria 3938
14 Ga0070692_10013604 3300005345 Bacteria 3798
15 Ga0070675_100044825 3300005354 Bacteria 3617
16 Ga0070675_100050088 3300005354 Bacteria 3429
17 Ga0070674_100032563 3300005356 Bacteria 3462
18 Ga0070714_100002260 3300005435 Bacteria 14166
19 Ga0070714_100010410 3300005435 Bacteria 7350
20 Ga0070701_10003080 3300005438 Bacteria 6538
21 Ga0070700_100000705 3300005441 Bacteria 16467
22 Ga0070694_100037772 3300005444 Bacteria 3205
23 Ga0070678_100002638 3300005456 Bacteria 9872
24 Ga0070678_100040434 3300005456 Bacteria 3299
25 Ga0070662_100008749 3300005457 Bacteria 6604
26 Ga0070681_10002462 3300005458 Bacteria 16960
27 Ga0070681_10004504 3300005458 Bacteria 13289
28 Ga0070681_10021661 3300005458 Bacteria 6444
29 Ga0070681_10029842 3300005458 Bacteria 5473
30 Ga0068867_100001930 3300005459 Bacteria 14446
31 Ga0070699_100032666 3300005518 Bacteria 4495
32 Ga0070684_100001168 3300005535 Bacteria 18835
33 Ga0068853_100031219 3300005539 Bacteria 4505
34 Ga0070686_100000265 3300005544 Bacteria 35750
35 Ga0070693_100001029 3300005547 Bacteria 12440
36 Ga0070693_100021658 3300005547 Bacteria 3407
37 Ga0070665_100021453 3300005548 Bacteria 6496
38 Ga0070704_100004095 3300005549 Bacteria 8418
39 Ga0070664_100000572 3300005564 Bacteria 28020
40 Ga0070664_100014098 3300005564 Bacteria 6519
41 Ga0068857_100000465 3300005577 Bacteria 28816
42 Ga0068857_100014809 3300005577 Bacteria 6803
43 Ga0068857_100025282 3300005577 Bacteria 5230
44 Ga0068854_100026728 3300005578 Bacteria 3969
45 Ga0068856_100000962 3300005614 Bacteria 30736
46 Ga0070702_100000223 3300005615 Bacteria 19138
47 Ga0068852_100012104 3300005616 Bacteria 6532
48 Ga0068852_100021854 3300005616 Bacteria 5119
49 Ga0068852_100023914 3300005616 Bacteria 4928
50 Ga0068859_100003358 3300005617 Bacteria 16282
51 Ga0068866_10000107 3300005718 Bacteria 35562
52 Ga0068851_10005396 3300005834 Bacteria 5798
53 Ga0068851_10006058 3300005834 Bacteria 5515
54 Ga0068870_10006398 3300005840 Bacteria 5189
55 Ga0068858_100012684 3300005842 Bacteria 7940
56 Ga0068858_100015384 3300005842 Bacteria 7195
57 Ga0068858_100025026 3300005842 Bacteria 5555
58 Ga0068862_100023211 3300005844 Bacteria 5196
59 Ga0075366_10004698 3300006195 Bacteria 7349
60 Ga0075366_10006424 3300006195 Bacteria 6441
61 Ga0097621_100013025 3300006237 Bacteria 6182
62 Ga0097621_100018775 3300006237 Bacteria 5291
63 Ga0068871_100001255 3300006358 Bacteria 16960
64 Ga0075430_100004390 3300006846 Bacteria 11907
65 Ga0075431_100009859 3300006847 Bacteria 9590
66 Ga0075429_100031512 3300006880 Bacteria 4608
67 Ga0068865_100002300 3300006881 Bacteria 11260
68 Ga0068865_100007528 3300006881 Bacteria 6699
69 Ga0075436_100001078 3300006914 Bacteria 18357
70 Ga0097620_100003358 3300006931 Bacteria 16282
71 Ga0105240_10022952 3300009093 Bacteria 8266
72 Ga0111539_10000086 3300009094 Bacteria 95435
73 Ga0111539_10001608 3300009094 Bacteria 30153
74 Ga0111539_10005490 3300009094 Bacteria 16400
75 Ga0105245_10000511 3300009098 Bacteria 35566
76 Ga0105243_10001212 3300009148 Bacteria 23228
77 Ga0105243_10007772 3300009148 Bacteria 8243
78 Ga0105242_10008711 3300009176 Bacteria 7783
79 Ga0105242_10017156 3300009176 Bacteria 5637
80 Ga0105242_10023693 3300009176 Bacteria 4839
81 Ga0105248_10000623 3300009177 Bacteria 40331
82 Ga0105248_10026238 3300009177 Bacteria 6483
83 Ga0105248_10042659 3300009177 Bacteria 5088
84 Ga0105248_10062342 3300009177 Bacteria 4187
85 Ga0105238_10000817 3300009551 Bacteria 32236
86 Ga0105238_10011318 3300009551 Bacteria 8974
87 Ga0105238_10073369 3300009551 Bacteria 3417
88 Ga0105249_10038790 3300009553 Bacteria 4322
89 Ga0157370_10001088 3300013104 Bacteria 34042
90 Ga0157369_10002600 3300013105 Bacteria 21604
91 Ga0157369_10009759 3300013105 Bacteria 10979
92 Ga0157374_10001181 3300013296 Bacteria 22291
93 Ga0157374_10028124 3300013296 Bacteria 5078
94 Ga0157378_10021538 3300013297 Bacteria 5669
95 Ga0163162_10005478 3300013306 Bacteria 12268
96 Ga0163162_10021766 3300013306 Bacteria 6315
97 Ga0157372_10014350 3300013307 Bacteria 8471
98 Ga0157375_10020926 3300013308 Bacteria 5987
99 Ga0157375_10033725 3300013308 Bacteria 4868
100 Ga0157380_10010570 3300014326 Bacteria 6638
101 Ga0157380_10015623 3300014326 Bacteria 5581
102 Ga0157379_10052943 3300014968 Bacteria 3626
103 Ga0157376_10028339 3300014969 Bacteria 4451
104 Ga0213872_10002971 3300021361 Bacteria 9593
105 Ga0207697_10002264 3300025315 Bacteria 10063
106 Ga0207656_10003543 3300025321 Bacteria 5377
107 Ga0207682_10001431 3300025893 Bacteria 11015
108 Ga0207642_10004109 3300025899 Bacteria 4666
109 Ga0207645_10003927 3300025907 Bacteria 11104
110 Ga0207643_10002685 3300025908 Bacteria 9616
111 Ga0207643_10010860 3300025908 Bacteria 4910
112 Ga0207695_10019928 3300025913 Bacteria 7703
113 Ga0207695_10022876 3300025913 Bacteria 7080
114 Ga0207657_10015277 3300025919 Bacteria 7444
115 Ga0207649_10022606 3300025920 Bacteria 3634
116 Ga0207694_10001640 3300025924 Bacteria 18831
117 Ga0207687_10003109 3300025927 Bacteria 11254
118 Ga0207664_10055389 3300025929 Bacteria 3146
119 Ga0207690_10004135 3300025932 Bacteria 8575
120 Ga0207706_10005160 3300025933 Bacteria 12189
121 Ga0207686_10000084 3300025934 Bacteria 79402
122 Ga0207686_10011232 3300025934 Bacteria 4898
123 Ga0207709_10005927 3300025935 Bacteria 6895
124 Ga0207704_10000722 3300025938 Bacteria 14494
125 Ga0207691_10018955 3300025940 Bacteria 6519
126 Ga0207711_10003719 3300025941 Bacteria 13148
127 Ga0207689_10003506 3300025942 Bacteria 14336
128 Ga0207689_10003835 3300025942 Bacteria 13699
129 Ga0207661_10011486 3300025944 Bacteria 6420
130 Ga0207667_10000842 3300025949 Bacteria 39549
131 Ga0207677_10025687 3300026023 Bacteria 3679
132 Ga0207708_10000049 3300026075 Bacteria 114743
133 Ga0207708_10001788 3300026075 Bacteria 15855
134 Ga0207708_10003721 3300026075 Bacteria 11259
135 Ga0207702_10010663 3300026078 Bacteria 7678
136 Ga0207648_10000161 3300026089 Bacteria 69095
137 Ga0207648_10006053 3300026089 Bacteria 12062
138 Ga0207674_10000182 3300026116 Bacteria 77228
139 Ga0207674_10015049 3300026116 Bacteria 8519
140 Ga0207674_10034260 3300026116 Bacteria 5311
141 Ga0207675_100000176 3300026118 Bacteria 57464
142 Ga0207683_10003348 3300026121 Bacteria 13973
143 Ga0207683_10015642 3300026121 Bacteria 6458
144 Ga0209999_1000801 3300027543 Bacteria 5187
145 Ga0207428_10002137 3300027907 Bacteria 19863
146 Ga0207428_10027397 3300027907 Bacteria 4744
147 Ga0268266_10021212 3300028379 Bacteria 5534
148 Ga0265338_10038442 3300028800 Bacteria 4535
149 Ga0265328_10000038 3300031239 Bacteria 91571
150 Ga0265328_10000946 3300031239 Bacteria 13330
151 Ga0265339_10017228 3300031249 Bacteria 4283
152 Ga0265331_10002405 3300031250 Bacteria 12684
153 Ga0265331_10007325 3300031250 Bacteria 6393
154 Ga0265327_10000065 3300031251 Bacteria 225004
155 Ga0265327_10001822 3300031251 Bacteria 24922
156 Ga0265316_10051164 3300031344 Bacteria 3246
157 Ga0265313_10000199 3300031595 Bacteria 64705
158 Ga0265314_10002443 3300031711 Bacteria 19012
159 Ga0395900_0010123 3300037418 Bacteria 9644
160 Ga0451577_0002155 3300042876 Bacteria 24105
161 Ga0466972_0001362 3300044658 Bacteria 11856
162 Ga0453684_0021481 3300044712 Bacteria 9642
163 Ga0453684_0033069 3300044712 Bacteria 7217
164 Ga0466970_0000012 3300044765 Bacteria 83623
165 Ga0451576_0000006 3300045051 Bacteria 949698
166 Ga0451576_0000810 3300045051 Bacteria 61225
167 Ga0451576_0003028 3300045051 Bacteria 23722
168 Ga0495607_0000363 3300046501 Bacteria 46637
169 Ga0495587_0018880 3300046536 Bacteria 4274
170 Ga0495645_0000490 3300046543 Bacteria 27455
171 Ga0495635_0020245 3300046663 Bacteria 4636
172 Ga0495599_0005109 3300046678 Bacteria 7815
173 Ga0495623_0002360 3300046679 Bacteria 12557
174 Ga0496104_0021473 3300048907 Bacteria 5927
175 Ga0496104_0086222 3300048907 Bacteria 2998
176 Ga0496108_0030755 3300048911 Bacteria 4449
177 Ga0496109_0022858 3300048912 Bacteria 5542
178 Ga0496109_0045461 3300048912 Bacteria 3985
179 Ga0496112_0009018 3300048915 Bacteria 8957
180 Ga0496114_0007479 3300048917 Bacteria 8637
181 Ga0496114_0008282 3300048917 Bacteria 8235
182 Ga0496115_0047800 3300048918 Bacteria 3422
183 Ga0501031_0003236 3300049568 Bacteria 10466
184 Ga0501032_0000171 3300049569 Bacteria 52873
185 Ga0501032_0005658 3300049569 Bacteria 9261
186 Ga0501032_0021012 3300049569 Bacteria 4541
187 Ga0501033_0000188 3300049570 Bacteria 59295
188 Ga0501033_0001514 3300049570 Bacteria 20571
189 Ga0501034_0001034 3300049571 Bacteria 39789
190 Ga0501034_0001157 3300049571 Bacteria 36580
191 Ga0501034_0010922 3300049571 Bacteria 9435
192 Ga0501036_0001880 3300049572 Bacteria 16285
193 Ga0501036_0006452 3300049572 Bacteria 9527
194 Ga0501037_0001493 3300049573 Bacteria 17099
195 Ga0501038_0000497 3300049574 Bacteria 34614
196 Ga0501039_0001221 3300049575 Bacteria 18876
197 Ga0501039_0034257 3300049575 Bacteria 3919
198 Ga0501040_0000113 3300049576 Bacteria 42277
199 Ga0501040_0002327 3300049576 Bacteria 12210
200 Ga0501042_0001304 3300049578 Bacteria 14536
201 Ga0501043_0000197 3300049579 Bacteria 54932
202 Ga0501043_0001318 3300049579 Bacteria 21696
203 Ga0501043_0015660 3300049579 Bacteria 5943
204 Ga0501046_0002067 3300049580 Bacteria 19042
205 Ga0501046_0003429 3300049580 Bacteria 14557
206 Ga0501047_0004802 3300049581 Bacteria 12719
207 Ga0501047_0029777 3300049581 Bacteria 5261
208 Ga0501048_0001629 3300049582 Bacteria 17086
209 Ga0501068_0000533 3300049584 Bacteria 19224
210 Ga0501068_0005002 3300049584 Bacteria 7218
211 Ga0501070_0003556 3300049586 Bacteria 13482
212 Ga0501070_0017190 3300049586 Bacteria 6071
213 Ga0501070_0068989 3300049586 Bacteria 2927
214 Ga0501072_0000279 3300049588 Bacteria 36892
215 Ga0501073_0000403 3300049589 Bacteria 29490
216 Ga0501073_0000710 3300049589 Bacteria 23547
217 Ga0501074_0003228 3300049590 Bacteria 11518
218 Ga0501076_0028500 3300049592 Bacteria 4336
219 Ga0501080_0000762 3300049742 Bacteria 26133
220 Ga0501080_0006670 3300049742 Bacteria 10387
221 Ga0501081_0006947 3300049743 Bacteria 7356
222 Ga0501035_0000547 3300049822 Bacteria 41822
223 Ga0501035_0001470 3300049822 Bacteria 24148
224 Ga0501035_0006456 3300049822 Bacteria 11012
225 Ga0501044_0001116 3300049823 Bacteria 31899
226 Ga0501044_0004102 3300049823 Bacteria 16333
227 Ga0501044_0010923 3300049823 Bacteria 9855
228 Ga0501045_0000488 3300049824 Bacteria 24537
229 nmdc:mga0k408_10827_c1 3300050493 Bacteria 4945
230 nmdc:mga09592_6072_c1 3300050508 Bacteria 9844
231 nmdc:mga0qj67_28604_c1 3300050509 Bacteria 4327
232 nmdc:mga06r32_12061_c1 3300050510 Bacteria 7789
233 nmdc:mga06r32_12299_c1 3300050510 Bacteria 7718
234 nmdc:mga08y16_32567_c1 3300050511 Bacteria 5478
235 nmdc:mga08x19_1770_c1 3300050514 Bacteria 13292
236 Ga0495601_0001241 3300053077 Bacteria 13988
237 Ga0495595_0006725 3300053084 Bacteria 4692
238 Ga0530510_0001033 3300061734 Bacteria 18419
239 2916179848 2916178963 Bacteria 5265078
240 2919495904 2919493220 Bacteria 4598500
241 2919500835 2919497567 Bacteria 4408621
242 2923525903 2923525760 Bacteria 4472324
243 Ga0075428_100002171
244 Ga0070683_100001287
245 Ga0070690_100000076
246 Ga0070690_100042310
247 Ga0070670_100038866
248 Ga0068869_100000361
249 Ga0068869_100001183
250 Ga0070660_100005619
251 Ga0070689_100005432
252 Ga0070689_100012771
253 Ga0070689_100014704
254 Ga0070661_100007248
255 Ga0070661_100029828
256 Ga0070692_10013604
257 Ga0070675_100044825
258 Ga0070675_100050088
259 Ga0070674_100032563
260 Ga0070714_100002260
261 Ga0070714_100010410
262 Ga0070701_10003080
263 Ga0070700_100000705
264 Ga0070694_100037772
265 Ga0070678_100002638
266 Ga0070678_100040434
267 Ga0070662_100008749
268 Ga0070681_10002462
269 Ga0070681_10004504
270 Ga0070681_10021661
271 Ga0070681_10029842
272 Ga0068867_100001930
273 Ga0070699_100032666
274 Ga0070684_100001168
275 Ga0068853_100031219
276 Ga0070686_100000265
277 Ga0070693_100001029
278 Ga0070693_100021658
279 Ga0070665_100021453
280 Ga0070704_100004095
281 Ga0070664_100000572
282 Ga0070664_100014098
283 Ga0068857_100000465
284 Ga0068857_100014809
285 Ga0068857_100025282
286 Ga0068854_100026728
287 Ga0068856_100000962
288 Ga0070702_100000223
289 Ga0068852_100012104
290 Ga0068852_100021854
291 Ga0068852_100023914
292 Ga0068859_100003358
293 Ga0068866_10000107
294 Ga0068851_10005396
295 Ga0068851_10006058
296 Ga0068870_10006398
297 Ga0068858_100012684
298 Ga0068858_100015384
299 Ga0068858_100025026
300 Ga0068862_100023211
301 Ga0075366_10004698
302 Ga0075366_10006424
303 Ga0097621_100013025
304 Ga0097621_100018775
305 Ga0068871_100001255
306 Ga0075430_100004390
307 Ga0075431_100009859
308 Ga0075429_100031512
309 Ga0068865_100002300
310 Ga0068865_100007528
311 Ga0075436_100001078
312 Ga0097620_100003358
313 Ga0105240_10022952
314 Ga0111539_10000086
315 Ga0111539_10001608
316 Ga0111539_10005490
317 Ga0105245_10000511
318 Ga0105243_10001212
319 Ga0105243_10007772
320 Ga0105242_10008711
321 Ga0105242_10017156
322 Ga0105242_10023693
323 Ga0105248_10000623
324 Ga0105248_10026238
325 Ga0105248_10042659
326 Ga0105248_10062342
327 Ga0105238_10000817
328 Ga0105238_10011318
329 Ga0105238_10073369
330 Ga0105249_10038790
331 Ga0157370_10001088
332 Ga0157369_10002600
333 Ga0157369_10009759
334 Ga0157374_10001181
335 Ga0157374_10028124
336 Ga0157378_10021538
337 Ga0163162_10005478
338 Ga0163162_10021766
339 Ga0157372_10014350
340 Ga0157375_10020926
341 Ga0157375_10033725
342 Ga0157380_10010570
343 Ga0157380_10015623
344 Ga0157379_10052943
345 Ga0157376_10028339
346 Ga0213872_10002971
347 Ga0207697_10002264
348 Ga0207656_10003543
349 Ga0207682_10001431
350 Ga0207642_10004109
351 Ga0207645_10003927
352 Ga0207643_10002685
353 Ga0207643_10010860
354 Ga0207695_10019928
355 Ga0207695_10022876
356 Ga0207657_10015277
357 Ga0207649_10022606
358 Ga0207694_10001640
359 Ga0207687_10003109
360 Ga0207664_10055389
361 Ga0207690_10004135
362 Ga0207706_10005160
363 Ga0207686_10000084
364 Ga0207686_10011232
365 Ga0207709_10005927
366 Ga0207704_10000722
367 Ga0207691_10018955
368 Ga0207711_10003719
369 Ga0207689_10003506
370 Ga0207689_10003835
371 Ga0207661_10011486
372 Ga0207667_10000842
373 Ga0207677_10025687
374 Ga0207708_10000049
375 Ga0207708_10001788
376 Ga0207708_10003721
377 Ga0207702_10010663
378 Ga0207648_10000161
379 Ga0207648_10006053
380 Ga0207674_10000182
381 Ga0207674_10015049
382 Ga0207674_10034260
383 Ga0207675_100000176
384 Ga0207683_10003348
385 Ga0207683_10015642
386 Ga0209999_1000801
387 Ga0207428_10002137
388 Ga0207428_10027397
389 Ga0268266_10021212
390 Ga0265338_10038442
391 Ga0265328_10000038
392 Ga0265328_10000946
393 Ga0265339_10017228
394 Ga0265331_10002405
395 Ga0265331_10007325
396 Ga0265327_10000065
397 Ga0265327_10001822
398 Ga0265316_10051164
399 Ga0265313_10000199
400 Ga0265314_10002443
401 Ga0395900_0010123
402 Ga0451577_0002155
403 Ga0466972_0001362
404 Ga0453684_0021481
405 Ga0453684_0033069
406 Ga0466970_0000012
407 Ga0451576_0000006
408 Ga0451576_0000810
409 Ga0451576_0003028
410 Ga0495607_0000363
411 Ga0495587_0018880
412 Ga0495645_0000490
413 Ga0495635_0020245
414 Ga0495599_0005109
415 Ga0495623_0002360
416 Ga0496104_0021473
417 Ga0496104_0086222
418 Ga0496108_0030755
419 Ga0496109_0022858
420 Ga0496109_0045461
421 Ga0496112_0009018
422 Ga0496114_0007479
423 Ga0496114_0008282
424 Ga0496115_0047800
425 Ga0501031_0003236
426 Ga0501032_0000171
427 Ga0501032_0005658
428 Ga0501032_0021012
429 Ga0501033_0000188
430 Ga0501033_0001514
431 Ga0501034_0001034
432 Ga0501034_0001157
433 Ga0501034_0010922
434 Ga0501036_0001880
435 Ga0501036_0006452
436 Ga0501037_0001493
437 Ga0501038_0000497
438 Ga0501039_0001221
439 Ga0501039_0034257
440 Ga0501040_0000113
441 Ga0501040_0002327
442 Ga0501042_0001304
443 Ga0501043_0000197
444 Ga0501043_0001318
445 Ga0501043_0015660
446 Ga0501046_0002067
447 Ga0501046_0003429
448 Ga0501047_0004802
449 Ga0501047_0029777
450 Ga0501048_0001629
451 Ga0501068_0000533
452 Ga0501068_0005002
453 Ga0501070_0003556
454 Ga0501070_0017190
455 Ga0501070_0068989
456 Ga0501072_0000279
457 Ga0501073_0000403
458 Ga0501073_0000710
459 Ga0501074_0003228
460 Ga0501076_0028500
461 Ga0501080_0000762
462 Ga0501080_0006670
463 Ga0501081_0006947
464 Ga0501035_0000547
465 Ga0501035_0001470
466 Ga0501035_0006456
467 Ga0501044_0001116
468 Ga0501044_0004102
469 Ga0501044_0010923
470 Ga0501045_0000488
471 nmdc:mga0k408_10827_c1
472 nmdc:mga09592_6072_c1
473 nmdc:mga0qj67_28604_c1
474 nmdc:mga06r32_12061_c1
475 nmdc:mga06r32_12299_c1
476 nmdc:mga08y16_32567_c1
477 nmdc:mga08x19_1770_c1
478 Ga0495601_0001241
479 Ga0495595_0006725
480 Ga0530510_0001033
481 2916179848
482 2919495904
483 2919500835
484 2923525903

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02810

SEC-C

SEC-C motif

915

933

0.98

PF07516

SecA_SW

SecA Wing and Scaffold domain

635

848

0.98

PF01043

SecA_PP_bind

SecA preprotein cross-linking domain

244

369

0.96

PF07517

SecA_DEAD

SecA DEAD-like domain

6

413

0.96

PF21090

P-loop_SecA

SecA P-loop domain

428

633

0.96

PF00270

DEAD

DEAD/DEAH box helicase

99

240

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bxz-assembly1.cif.gz_A crystal structure of the isolated dead motor domains from escherichia coli seca 0.9525 11 595
3bxz-assembly1.cif.gz_A crystal structure of the isolated dead motor domains from escherichia coli seca 0.9483 11 595
3dl8-assembly1.cif.gz_A structure of the complex of aquifex aeolicus secyeg and bacillus subtilis seca 0.8333 14 800
3dl8-assembly1.cif.gz_A structure of the complex of aquifex aeolicus secyeg and bacillus subtilis seca 0.8264 14 800
5eul-assembly1.cif.gz_A structure of the seca-secy complex with a translocating polypeptide substrate 0.8182 18 800
ID Description Score Start End Superfamily
af_A0A1D6MS70_87_296_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9453 20 227 3.40.50.300
5k9tA02 Alpha Beta;Alpha-Beta Complex;Pre-protein croslinking domain of SecA;SecA, preprotein cross-linking domain 0.9444 231 363 3.90.1440.10
1m74A03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9335 412 621 3.40.50.300
2ibmB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9326 14 410 3.40.50.300
af_A0A1D6MS70_87_296_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9322 20 227 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6N6X6J1-F1-model_v4 deleted 0.9891 22 170
AF-A0A376YDE9-F1-model_v4 Preprotein translocase subunit SecA 0.9871 35 172 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0017038
GO:0031522
GO:0043952
AF-A0A534ILX1-F1-model_v4 Preprotein translocase subunit SecA 0.9838 67 180 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0017038
AF-A0A453HJD4-F1-model_v4 chloroplast protein-transporting ATPase (EC 7.4.2.4) 0.9834 8 180 GO:0005524
GO:0006605
GO:0006886
GO:0009941
GO:0016020
GO:0016464
GO:0017038
AF-A0A3D2DA62-F1-model_v4 deleted 0.982 1 155

Map