F354218

General Info

Members Datasets Scaffolds Average Seq Length
241 145 430 320

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2877676314|2877680348
Length 356
Sequence AAHPANDPANHPHHPHDPHHPHDPHDPQDPCPRAIALYERALREGGLDRQHASSLPCLLESGLLEPARQDPAAQDPARQDPARLTPVPPALVLHRLLRAAGDRVLRERRHSARLAEAFAPLTRIGGRSGTEADRSPAIRVVSGTGRINEAITGAMAGAVSELLCVQPNLHYSDSRGAAAQAVAMDRDQALLDRGGRIRTLYQHTQRQMPLVLARYEQLRGDAEARSLDEVTDRLIVVDRDVAFLPAGADGTVALEVRHPALVEFLAATFDRLWWQATPLYPQAVHRPSLNGVTPRQRAIAGLLVEGHTDAVIADRLGMNIRTARVHIAKLATTLGSESRAQLGYLIGRSGILDREA

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
5 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
6 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
7 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
8 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
9 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
10 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
11 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
12 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
13 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
14 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
15 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
16 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
17 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
18 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
19 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
20 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
21 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
22 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
23 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
24 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
25 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
26 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
27 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
28 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
29 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
30 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
31 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
32 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
33 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
34 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
35 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
36 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
37 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
38 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
39 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
40 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
41 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
42 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
43 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
44 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
45 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
46 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
47 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
48 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
49 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
50 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
51 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
52 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
53 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
54 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
55 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
56 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
57 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
58 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
59 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
60 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
61 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
62 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
63 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
64 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
65 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
66 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
67 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
68 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
69 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
70 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
71 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
72 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
73 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
74 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
75 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
76 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
77 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
78 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
79 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
80 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
81 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
82 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
83 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
84 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
85 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
94 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
95 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
97 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
98 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
99 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
100 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
101 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
102 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
103 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
104 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
105 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
106 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
107 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
108 2643221647 Streptomyces sp. Root369 Isolate Unclassified
109 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
110 2643221714 Streptomyces sp. Root264 Isolate Unclassified
111 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
112 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
113 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
114 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
115 2808606448 Streptomyces sp. 193411 Isolate Unclassified
116 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
117 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
118 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
119 2862574272 Streptomyces sp. AcE210 Isolate Nodule
120 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
121 2867428634 Streptomyces sp. RP5T Isolate Unclassified
122 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
123 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
124 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
125 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
126 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
127 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
128 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
129 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
130 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
131 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
132 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
133 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
134 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
135 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
136 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
137 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
138 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
139 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
140 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
141 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
142 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
143 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
144 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
145 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.61
Metatranscriptomes 0
Isolates 27.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.9
Nodule 1.66
Rhizoplane 0
Rhizosphere 65.15
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10002118 3300003316 Bacteria 6074
2 rootL2_10036980 3300003322 Bacteria 3404
3 rootL2_10095393 3300003322 Bacteria 5224
4 rootH1_10058956 3300003323 Bacteria 3099
5 rootH1_10078696 3300003323 Bacteria 4521
6 rootH1_10078703 3300003323 Bacteria 1830
7 Ga0075363_100016063 3300006048 Bacteria 3692
8 Ga0105244_10104946 3300009036 Bacteria 1379
9 Ga0183367_1015 3300015688 Bacteria 298435
10 Ga0207709_10003959 3300025935 Bacteria 8647
11 Ga0307517_10016819 3300028786 Bacteria 9583
12 Ga0307515_10010386 3300028794 Bacteria 17842
13 Ga0307515_10089760 3300028794 Bacteria 3864
14 Ga0307511_10017648 3300030521 Bacteria 6840
15 Ga0307512_10004792 3300030522 Bacteria 14534
16 Ga0307512_10078654 3300030522 Bacteria 2388
17 Ga0307512_10089870 3300030522 Bacteria 2146
18 Ga0307513_10075895 3300031456 Bacteria 3488
19 Ga0307513_10102472 3300031456 Bacteria 2881
20 Ga0307509_10070143 3300031507 Bacteria 3661
21 Ga0307509_10097725 3300031507 Bacteria 2984
22 Ga0307508_10039772 3300031616 Bacteria 4223
23 Ga0307508_10056794 3300031616 Bacteria 3465
24 Ga0307508_10088533 3300031616 Bacteria 2680
25 Ga0307514_10032773 3300031649 Bacteria 4153
26 Ga0307514_10048997 3300031649 Bacteria 3286
27 Ga0307514_10060759 3300031649 Bacteria 2881
28 Ga0307516_10004706 3300031730 Bacteria 16687
29 Ga0307516_10006155 3300031730 Bacteria 14137
30 Ga0307518_10039123 3300031838 Bacteria 3448
31 Ga0307518_10096232 3300031838 Bacteria 2124
32 Ga0307518_10164537 3300031838 Bacteria 1520
33 Ga0307410_10214709 3300031852 Bacteria 1476
34 Ga0307416_100299067 3300032002 Bacteria 1598
35 Ga0307416_100424994 3300032002 Bacteria 1374
36 Ga0307507_10024172 3300033179 Bacteria 6634
37 Ga0307507_10048688 3300033179 Bacteria 4118
38 Ga0307510_10025824 3300033180 Bacteria 6768
39 Ga0307510_10085845 3300033180 Bacteria 3022
40 Ga0307510_10111876 3300033180 Bacteria 2470
41 Ga0307510_10151887 3300033180 Bacteria 1932
42 Ga0395898_0012902 3300037466 Bacteria 8620
43 Ga0395901_0245278 3300038443 Bacteria 1867
44 Ga0439448_0001314 3300042005 Bacteria 6352
45 Ga0439455_0007112 3300042012 Bacteria 2355
46 Ga0450903_000079 3300042138 Bacteria 19878
47 Ga0439458_0000086 3300042157 Bacteria 17612
48 Ga0466969_0018774 3300044656 Bacteria 3599
49 Ga0466972_0005003 3300044658 Bacteria 6644
50 Ga0466966_0002965 3300044684 Bacteria 11170
51 Ga0466961_0121867 3300044693 Bacteria 1636
52 Ga0466968_0013795 3300044735 Bacteria 3181
53 Ga0466959_0116342 3300045049 Bacteria 1904
54 Ga0466967_0159099 3300045976 Bacteria 2119
55 Ga0495627_025605 3300046453 Bacteria 1912
56 Ga0495592_0023338 3300046454 Bacteria 4704
57 Ga0495603_0009700 3300046455 Bacteria 5823
58 Ga0495603_0009986 3300046455 Bacteria 5744
59 Ga0495590_0059206 3300046457 Bacteria 1340
60 Ga0495629_0013920 3300046459 Bacteria 5799
61 Ga0495629_0015157 3300046459 Bacteria 5540
62 Ga0495629_0017367 3300046459 Bacteria 5156
63 Ga0495638_0045350 3300046460 Bacteria 2766
64 Ga0495651_0004458 3300046462 Bacteria 10719
65 Ga0495582_0016903 3300046473 Bacteria 3995
66 Ga0495639_0025226 3300046475 Bacteria 2621
67 Ga0495662_0009335 3300046476 Bacteria 4811
68 Ga0495664_0001811 3300046477 Bacteria 11344
69 Ga0495594_0039894 3300046499 Bacteria 2568
70 Ga0495594_0047136 3300046499 Bacteria 2367
71 Ga0495607_0141457 3300046501 Bacteria 1240
72 Ga0495618_0028455 3300046514 Bacteria 3482
73 Ga0495628_0014198 3300046516 Bacteria 6685
74 Ga0495630_0025764 3300046517 Bacteria 4350
75 Ga0495643_0087619 3300046522 Bacteria 1611
76 Ga0495652_0015452 3300046529 Bacteria 6836
77 Ga0495640_0118967 3300046533 Bacteria 1719
78 Ga0495586_0044307 3300046535 Bacteria 2397
79 Ga0495587_0027736 3300046536 Bacteria 3447
80 Ga0495645_0038125 3300046543 Bacteria 3505
81 Ga0495667_0066675 3300046559 Bacteria 2353
82 Ga0495634_0012906 3300046642 Bacteria 6045
83 Ga0495611_0015686 3300046648 Bacteria 3238
84 Ga0495611_0028750 3300046648 Bacteria 2435
85 Ga0495625_0007425 3300046660 Bacteria 9539
86 Ga0495625_0080574 3300046660 Bacteria 2267
87 Ga0495625_0129826 3300046660 Bacteria 1708
88 Ga0495588_0011254 3300046674 Bacteria 4192
89 Ga0495588_0063757 3300046674 Bacteria 1911
90 Ga0495657_0010732 3300046675 Bacteria 6885
91 Ga0495646_0001596 3300046680 Bacteria 13501
92 Ga0495658_0011970 3300046683 Bacteria 4379
93 Ga0495613_0021340 3300046689 Bacteria 4830
94 Ga0495613_0035014 3300046689 Bacteria 3728
95 Ga0495624_0041999 3300046690 Bacteria 2923
96 Ga0495670_0013751 3300046691 Bacteria 3979
97 Ga0495671_0003447 3300046692 Bacteria 9711
98 Ga0495649_0083190 3300046694 Bacteria 1710
99 Ga0495589_0000932 3300046794 Bacteria 17927
100 Ga0495600_0038084 3300046809 Bacteria 3127
101 Ga0495581_0006429 3300047315 Bacteria 6818
102 Ga0495604_0005431 3300047317 Bacteria 10106
103 Ga0495636_0013509 3300047318 Bacteria 3242
104 Ga0495636_0041564 3300047318 Bacteria 1909
105 Ga0495676_0005827 3300047321 Bacteria 11308
106 Ga0495676_0018473 3300047321 Bacteria 6147
107 Ga0495676_0019139 3300047321 Bacteria 6026
108 Ga0495683_0058668 3300047323 Bacteria 1911
109 Ga0495687_007969 3300047443 Bacteria 6147
110 Ga0495687_026462 3300047443 Bacteria 2729
111 Ga0495687_032328 3300047443 Bacteria 2390
112 Ga0495685_001289 3300047447 Bacteria 7657
113 Ga0495685_009555 3300047447 Bacteria 3244
114 Ga0495685_015621 3300047447 Bacteria 2591
115 Ga0495681_0000587 3300047470 Bacteria 27794
116 Ga0495684_0074457 3300047471 Bacteria 2580
117 Ga0495686_0018638 3300047472 Bacteria 4652
118 Ga0495686_0060325 3300047472 Bacteria 2358
119 Ga0495593_0005712 3300047673 Bacteria 7343
120 Ga0495593_0089684 3300047673 Bacteria 1584
121 Ga0495602_0027323 3300048088 Bacteria 5485
122 Ga0495614_0001532 3300048089 Bacteria 10012
123 Ga0495614_0012490 3300048089 Bacteria 3725
124 Ga0501032_0293904 3300049569 Bacteria 1051
125 Ga0501033_0028101 3300049570 Bacteria 4227
126 Ga0501034_0035551 3300049571 Bacteria 5050
127 Ga0501034_0057672 3300049571 Bacteria 3904
128 Ga0501036_0006414 3300049572 Bacteria 9550
129 Ga0501036_0017904 3300049572 Bacteria 5931
130 Ga0501036_0124380 3300049572 Bacteria 2178
131 Ga0501038_0042152 3300049574 Bacteria 3976
132 Ga0501038_0174138 3300049574 Bacteria 1740
133 Ga0501042_0204582 3300049578 Bacteria 1424
134 Ga0501043_0011947 3300049579 Bacteria 6794
135 Ga0501070_0018190 3300049586 Bacteria 5894
136 Ga0501070_0115676 3300049586 Bacteria 2215
137 Ga0501074_0004168 3300049590 Bacteria 10324
138 Ga0501080_0084688 3300049742 Bacteria 2945
139 Ga0501035_0004292 3300049822 Bacteria 13533
140 Ga0501035_0178360 3300049822 Bacteria 1831
141 Ga0501044_0022147 3300049823 Bacteria 6775
142 Ga0501044_0121488 3300049823 Bacteria 2612
143 Ga0495612_0023352 3300053078 Bacteria 2481
144 Ga0500644_0005673 3300053088 Bacteria 3157
145 Ga0500640_001705 3300053095 Bacteria 6843
146 Ga0500553_091778 3300053101 Bacteria 1334
147 Ga0500560_001980 3300053107 Bacteria 3771
148 Ga0500560_006039 3300053107 Bacteria 2734
149 Ga0500573_0028895 3300053140 Bacteria 3194
150 2877680348 2877676314 Bacteria 9512378
151 2547406331 2547132111 Bacteria 8013147
152 2585305432 2582581313 Bacteria 10042643
153 2585305433 2582581313 Bacteria 10042643
154 2585312845 2582581314 Bacteria 11452267
155 2616904473 2616644941 Bacteria 8510691
156 2644268516 2643221647 Bacteria 10741251
157 2644268517 2643221647 Bacteria 10741251
158 2644268518 2643221647 Bacteria 10741251
159 2644437401 2643221678 Bacteria 9540101
160 2644628221 2643221714 Bacteria 9015452
161 2784589249 2784132148 Bacteria 8627943
162 2784589250 2784132148 Bacteria 8627943
163 2785370285 2784746768 Bacteria 10036182
164 2785370286 2784746768 Bacteria 10036182
165 2785370287 2784746768 Bacteria 10036182
166 2786671394 2786546132 Bacteria 10419719
167 2786671395 2786546132 Bacteria 10419719
168 2808842796 2808606359 Bacteria 9866990
169 2809232861 2808606448 Bacteria 8656184
170 2809232863 2808606448 Bacteria 8656184
171 2812479928 2811994917 Bacteria 7761064
172 2862388011 2862382967 Bacteria 10317375
173 2862510099 2862507626 Bacteria 9425308
174 2862578639 2862574272 Bacteria 10567477
175 2863412157 2863404153 Bacteria 9672205
176 2863412158 2863404153 Bacteria 9672205
177 2867431310 2867428634 Bacteria 9590268
178 2867431312 2867428634 Bacteria 9590268
179 2877680347 2877676314 Bacteria 9512378
180 2912718969 2912715099 Bacteria 9460473
181 2912724161 2912723979 Bacteria 8557534
182 2919471262 2919468124 Bacteria 9133025
183 2946068611 2946064051 Bacteria 8957905
184 2946076609 2946072368 Bacteria 8999607
185 2947228282 2947224130 Bacteria 9938529
186 2947228283 2947224130 Bacteria 9938529
187 2954385413 2954380949 Bacteria 10050426
188 2954385414 2954380949 Bacteria 10050426
189 2954677698 2954673503 Bacteria 9685905
190 2954677699 2954673503 Bacteria 9685905
191 2954686455 2954682443 Bacteria 9862841
192 2954686456 2954682443 Bacteria 9862841
193 2954696102 2954691527 Bacteria 10720516
194 2954696103 2954691527 Bacteria 10720516
195 2954711275 2954701450 Bacteria 10834262
196 2954711276 2954701450 Bacteria 10834262
197 2954715506 2954711539 Bacteria 10867210
198 2954715507 2954711539 Bacteria 10867210
199 2954725443 2954721474 Bacteria 10456478
200 2954725444 2954721474 Bacteria 10456478
201 2954736369 2954731030 Bacteria 10243860
202 2954736370 2954731030 Bacteria 10243860
203 2954744380 2954740390 Bacteria 10229294
204 2954744381 2954740390 Bacteria 10229294
205 2954755218 2954749733 Bacteria 10366972
206 2954763353 2954759201 Bacteria 9358192
207 2954763354 2954759201 Bacteria 9358192
208 3006487048 3006486233 Bacteria 8157040
209 3006500202 3006493962 Bacteria 8825450
210 8008565986 8008558824 Bacteria 10610750
211 8008565987 8008558824 Bacteria 10610750
212 8023630035 8023623736 Bacteria 8593882
213 8033684838 8033684223 Bacteria 6906479
214 8048410830 8048406513 Bacteria 8936924
215 8056837812 8056829672 Bacteria 9045328
216 rootH1_10002118
217 rootL2_10036980
218 rootL2_10095393
219 rootH1_10058956
220 rootH1_10078696
221 rootH1_10078703
222 Ga0075363_100016063
223 Ga0105244_10104946
224 Ga0183367_1015
225 Ga0207709_10003959
226 Ga0307517_10016819
227 Ga0307515_10010386
228 Ga0307515_10089760
229 Ga0307511_10017648
230 Ga0307512_10004792
231 Ga0307512_10078654
232 Ga0307512_10089870
233 Ga0307513_10075895
234 Ga0307513_10102472
235 Ga0307509_10070143
236 Ga0307509_10097725
237 Ga0307508_10039772
238 Ga0307508_10056794
239 Ga0307508_10088533
240 Ga0307514_10032773
241 Ga0307514_10048997
242 Ga0307514_10060759
243 Ga0307516_10004706
244 Ga0307516_10006155
245 Ga0307518_10039123
246 Ga0307518_10096232
247 Ga0307518_10164537
248 Ga0307410_10214709
249 Ga0307416_100299067
250 Ga0307416_100424994
251 Ga0307507_10024172
252 Ga0307507_10048688
253 Ga0307510_10025824
254 Ga0307510_10085845
255 Ga0307510_10111876
256 Ga0307510_10151887
257 Ga0395898_0012902
258 Ga0395901_0245278
259 Ga0439448_0001314
260 Ga0439455_0007112
261 Ga0450903_000079
262 Ga0439458_0000086
263 Ga0466969_0018774
264 Ga0466972_0005003
265 Ga0466966_0002965
266 Ga0466961_0121867
267 Ga0466968_0013795
268 Ga0466959_0116342
269 Ga0466967_0159099
270 Ga0495627_025605
271 Ga0495592_0023338
272 Ga0495603_0009700
273 Ga0495603_0009986
274 Ga0495590_0059206
275 Ga0495629_0013920
276 Ga0495629_0015157
277 Ga0495629_0017367
278 Ga0495638_0045350
279 Ga0495651_0004458
280 Ga0495582_0016903
281 Ga0495639_0025226
282 Ga0495662_0009335
283 Ga0495664_0001811
284 Ga0495594_0039894
285 Ga0495594_0047136
286 Ga0495607_0141457
287 Ga0495618_0028455
288 Ga0495628_0014198
289 Ga0495630_0025764
290 Ga0495643_0087619
291 Ga0495652_0015452
292 Ga0495640_0118967
293 Ga0495586_0044307
294 Ga0495587_0027736
295 Ga0495645_0038125
296 Ga0495667_0066675
297 Ga0495634_0012906
298 Ga0495611_0015686
299 Ga0495611_0028750
300 Ga0495625_0007425
301 Ga0495625_0080574
302 Ga0495625_0129826
303 Ga0495588_0011254
304 Ga0495588_0063757
305 Ga0495657_0010732
306 Ga0495646_0001596
307 Ga0495658_0011970
308 Ga0495613_0021340
309 Ga0495613_0035014
310 Ga0495624_0041999
311 Ga0495670_0013751
312 Ga0495671_0003447
313 Ga0495649_0083190
314 Ga0495589_0000932
315 Ga0495600_0038084
316 Ga0495581_0006429
317 Ga0495604_0005431
318 Ga0495636_0013509
319 Ga0495636_0041564
320 Ga0495676_0005827
321 Ga0495676_0018473
322 Ga0495676_0019139
323 Ga0495683_0058668
324 Ga0495687_007969
325 Ga0495687_026462
326 Ga0495687_032328
327 Ga0495685_001289
328 Ga0495685_009555
329 Ga0495685_015621
330 Ga0495681_0000587
331 Ga0495684_0074457
332 Ga0495686_0018638
333 Ga0495686_0060325
334 Ga0495593_0005712
335 Ga0495593_0089684
336 Ga0495602_0027323
337 Ga0495614_0001532
338 Ga0495614_0012490
339 Ga0501032_0293904
340 Ga0501033_0028101
341 Ga0501034_0035551
342 Ga0501034_0057672
343 Ga0501036_0006414
344 Ga0501036_0017904
345 Ga0501036_0124380
346 Ga0501038_0042152
347 Ga0501038_0174138
348 Ga0501042_0204582
349 Ga0501043_0011947
350 Ga0501070_0018190
351 Ga0501070_0115676
352 Ga0501074_0004168
353 Ga0501080_0084688
354 Ga0501035_0004292
355 Ga0501035_0178360
356 Ga0501044_0022147
357 Ga0501044_0121488
358 Ga0495612_0023352
359 Ga0500644_0005673
360 Ga0500640_001705
361 Ga0500553_091778
362 Ga0500560_001980
363 Ga0500560_006039
364 Ga0500573_0028895
365 2877680348
366 2547406331
367 2585305432
368 2585305433
369 2585312845
370 2616904473
371 2644268516
372 2644268517
373 2644268518
374 2644437401
375 2644628221
376 2784589249
377 2784589250
378 2785370285
379 2785370286
380 2785370287
381 2786671394
382 2786671395
383 2808842796
384 2809232861
385 2809232863
386 2812479928
387 2862388011
388 2862510099
389 2862578639
390 2863412157
391 2863412158
392 2867431310
393 2867431312
394 2877680347
395 2912718969
396 2912724161
397 2919471262
398 2946068611
399 2946076609
400 2947228282
401 2947228283
402 2954385413
403 2954385414
404 2954677698
405 2954677699
406 2954686455
407 2954686456
408 2954696102
409 2954696103
410 2954711275
411 2954711276
412 2954715506
413 2954715507
414 2954725443
415 2954725444
416 2954736369
417 2954736370
418 2954744380
419 2954744381
420 2954755218
421 2954763353
422 2954763354
423 3006487048
424 3006500202
425 8008565986
426 8008565987
427 8023630035
428 8033684838
429 8048410830
430 8056837812

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

290

345

0.97

Map