F353967

General Info

Members Datasets Scaffolds Average Seq Length
241 141 482 304

Family's Representative Sequence

Representative Sequence 3300038443|Ga0395901_0090063|Ga0395901_0090063_1983_3029
Length 348
Sequence MPFSRTTALEYLHRAHEQNRLAHAYLISGPPGSGKQLLAADLASLVNDTPAKDVFSAKAREIFVARPESKSRRIVIEQIRDLEHALQMRASNGRRKVAIISDADRLQPQAANAFLKTLEEPPKDSLLLLLSALPEALPETILSRCIAIPLAPDGQLQSSDEEKKLVELLQQASREQNWTVQFAYRLSQEFQQLLRAVREAVKRETDEALKQEETRYKDATDGTWLDEREQYYKALAESLYLQRRAGLIEILFAWWSDVLRSSNGVVQRNLPRAKEETAGLAARFRTAEILKRIHCLEELRDNLNRNIHEALAIEVVFLTIFIATSRSDGFPAIMSASIATELRDDSYG

Samples

Sample ID Description Type Environment
1 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
37 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
38 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
43 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
49 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
69 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
101 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
112 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
113 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
114 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
117 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
118 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
119 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
120 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
121 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
122 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
123 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.98
Rhizosphere 94.61
Stem 0
Stem Tuber 0
Unclassified 21.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395901_0090063 3300038443 Bacteria 3211
2 JGI25405J52794_10009247 3300003911 Unclassified 1858
3 JGI25405J52794_10026520 3300003911 Unclassified 1191
4 Ga0065704_10028481 3300005289 Unclassified 1685
5 Ga0065712_10001462 3300005290 Bacteria 10538
6 Ga0065712_10005678 3300005290 Unclassified 2815
7 Ga0065715_10024405 3300005293 Bacteria 2034
8 Ga0065715_10092720 3300005293 Bacteria 4968
9 Ga0065707_10156150 3300005295 Bacteria 1607
10 Ga0070683_100005860 3300005329 Bacteria 10286
11 Ga0070683_100013716 3300005329 Bacteria 7076
12 Ga0070683_100088975 3300005329 Unclassified 2897
13 Ga0070690_100229082 3300005330 Unclassified 1306
14 Ga0070670_100197603 3300005331 Unclassified 1747
15 Ga0070666_10166314 3300005335 Bacteria 1543
16 Ga0070666_10243329 3300005335 Bacteria 1272
17 Ga0070680_100332950 3300005336 Unclassified 1289
18 Ga0070682_100063222 3300005337 Unclassified 2346
19 Ga0070689_100014664 3300005340 Bacteria 5699
20 Ga0070687_100018571 3300005343 Unclassified 3219
21 Ga0070661_100036082 3300005344 Bacteria 3593
22 Ga0070675_100001481 3300005354 Bacteria 17325
23 Ga0070675_100004168 3300005354 Bacteria 10976
24 Ga0070671_100193640 3300005355 Unclassified 1723
25 Ga0070688_100008031 3300005365 Bacteria 5711
26 Ga0070659_100002887 3300005366 Bacteria 12229
27 Ga0070667_100129770 3300005367 Unclassified 2199
28 Ga0070709_10033723 3300005434 Unclassified 3099
29 Ga0070714_100104494 3300005435 Bacteria 2499
30 Ga0070713_100015318 3300005436 Bacteria 5725
31 Ga0070710_10059614 3300005437 Unclassified 2169
32 Ga0070710_10083994 3300005437 Unclassified 1865
33 Ga0070700_100012335 3300005441 Bacteria 4765
34 Ga0070708_100029820 3300005445 Bacteria 4708
35 Ga0070708_100041955 3300005445 Bacteria 4014
36 Ga0070708_100112050 3300005445 Bacteria 2508
37 Ga0070708_100439631 3300005445 Unclassified 1230
38 Ga0070663_100072850 3300005455 Unclassified 2504
39 Ga0070663_100365951 3300005455 Unclassified 1171
40 Ga0070678_100178780 3300005456 Unclassified 1735
41 Ga0070662_100047419 3300005457 Bacteria 3091
42 Ga0070681_10228917 3300005458 Bacteria 1773
43 Ga0070685_10013373 3300005466 Unclassified 4326
44 Ga0070685_10021174 3300005466 Bacteria 3531
45 Ga0070706_100000473 3300005467 Bacteria 47572
46 Ga0070706_100005173 3300005467 Bacteria 12450
47 Ga0070706_100020032 3300005467 Bacteria 6166
48 Ga0070706_100125035 3300005467 Bacteria 2398
49 Ga0070706_100178797 3300005467 Bacteria 1981
50 Ga0070706_100218061 3300005467 Bacteria 1781
51 Ga0070706_100230673 3300005467 Bacteria 1728
52 Ga0070707_100005178 3300005468 Bacteria 12217
53 Ga0070707_100009008 3300005468 Bacteria 9255
54 Ga0070707_100013587 3300005468 Bacteria 7622
55 Ga0070707_100018985 3300005468 Bacteria 6476
56 Ga0070707_100026373 3300005468 Bacteria 5516
57 Ga0070707_100033019 3300005468 Unclassified 4933
58 Ga0070707_100047780 3300005468 Unclassified 4098
59 Ga0070707_100071096 3300005468 Unclassified 3352
60 Ga0070707_100178968 3300005468 Bacteria 2067
61 Ga0070698_100062428 3300005471 Unclassified 3759
62 Ga0070698_100119846 3300005471 Bacteria 2592
63 Ga0070699_100187709 3300005518 Bacteria 1836
64 Ga0070699_100231223 3300005518 Bacteria 1649
65 Ga0070679_100183004 3300005530 Bacteria 2067
66 Ga0070684_100000230 3300005535 Bacteria 38807
67 Ga0070684_100093395 3300005535 Bacteria 2678
68 Ga0070684_100243677 3300005535 Bacteria 1643
69 Ga0070697_100002272 3300005536 Bacteria 14752
70 Ga0070697_100009591 3300005536 Bacteria 7561
71 Ga0070697_100021662 3300005536 Bacteria 5094
72 Ga0070697_100066798 3300005536 Bacteria 2940
73 Ga0070697_100082933 3300005536 Bacteria 2643
74 Ga0070697_100109909 3300005536 Bacteria 2296
75 Ga0070697_100133030 3300005536 Bacteria 2087
76 Ga0070697_100160290 3300005536 Bacteria 1900
77 Ga0070672_100160621 3300005543 Bacteria 1864
78 Ga0070686_100024975 3300005544 Bacteria 3588
79 Ga0070665_100021945 3300005548 Bacteria 6421
80 Ga0070704_100006870 3300005549 Bacteria 6739
81 Ga0070664_100049602 3300005564 Unclassified 3551
82 Ga0068856_100022135 3300005614 Bacteria 6180
83 Ga0068859_100026245 3300005617 Bacteria 5842
84 Ga0068859_100436240 3300005617 Bacteria 1406
85 Ga0068863_100063746 3300005841 Unclassified 3486
86 Ga0068858_100025321 3300005842 Bacteria 5522
87 Ga0081455_10001298 3300005937 Bacteria 31030
88 Ga0081455_10001670 3300005937 Bacteria 26904
89 Ga0081455_10009029 3300005937 Bacteria 10290
90 Ga0081455_10014704 3300005937 Bacteria 7643
91 Ga0081455_10021262 3300005937 Bacteria 6089
92 Ga0081455_10079653 3300005937 Bacteria 2689
93 Ga0081455_10114521 3300005937 Bacteria 2136
94 Ga0081455_10178079 3300005937 Unclassified 1613
95 Ga0081540_1003702 3300005983 Bacteria 11978
96 Ga0081540_1063027 3300005983 Bacteria 1757
97 Ga0081539_10103195 3300005985 Unclassified 1449
98 Ga0070717_10013727 3300006028 Bacteria 6216
99 Ga0070717_10019031 3300006028 Bacteria 5377
100 Ga0070717_10020747 3300006028 Bacteria 5173
101 Ga0070717_10034644 3300006028 Bacteria 4083
102 Ga0070717_10086191 3300006028 Bacteria 2643
103 Ga0070717_10100176 3300006028 Bacteria 2459
104 Ga0070716_100005530 3300006173 Bacteria 6127
105 Ga0070712_100194457 3300006175 Bacteria 1589
106 Ga0075428_100114987 3300006844 Bacteria 2931
107 Ga0097620_100026245 3300006931 Bacteria 5842
108 Ga0097620_100436234 3300006931 Bacteria 1406
109 Ga0105245_10272397 3300009098 Bacteria 1651
110 Ga0114129_10033833 3300009147 Bacteria 7220
111 Ga0114129_10143324 3300009147 Bacteria 3274
112 Ga0114129_10181892 3300009147 Bacteria 2860
113 Ga0105249_10064004 3300009553 Bacteria 3380
114 Ga0105249_10150979 3300009553 Bacteria 2237
115 Ga0105239_10022350 3300010375 Bacteria 6974
116 Ga0105239_10022717 3300010375 Bacteria 6915
117 Ga0105239_10338611 3300010375 Bacteria 1697
118 Ga0157374_10008128 3300013296 Bacteria 8966
119 Ga0157374_10097981 3300013296 Unclassified 2806
120 Ga0157374_10209242 3300013296 Bacteria 1912
121 Ga0157378_10041622 3300013297 Bacteria 4076
122 Ga0157378_10351468 3300013297 Bacteria 1440
123 Ga0163162_10084777 3300013306 Unclassified 3245
124 Ga0157375_10005355 3300013308 Bacteria 11152
125 Ga0157375_10054375 3300013308 Unclassified 3943
126 Ga0163163_10065339 3300014325 Bacteria 3611
127 Ga0157379_10014554 3300014968 Bacteria 6903
128 Ga0157376_10134457 3300014969 Unclassified 2211
129 Ga0157376_10241108 3300014969 Bacteria 1684
130 Ga0207666_1000110 3300025271 Bacteria 12811
131 Ga0207673_1002234 3300025290 Unclassified 2187
132 Ga0207697_10000496 3300025315 Bacteria 22132
133 Ga0207697_10001359 3300025315 Bacteria 13417
134 Ga0207697_10003954 3300025315 Bacteria 7206
135 Ga0207697_10021030 3300025315 Unclassified 2672
136 Ga0207697_10025894 3300025315 Bacteria 2398
137 Ga0207653_10023838 3300025885 Bacteria 1951
138 Ga0207653_10067887 3300025885 Bacteria 1214
139 Ga0207699_10093560 3300025906 Unclassified 1892
140 Ga0207645_10000820 3300025907 Bacteria 26050
141 Ga0207684_10000285 3300025910 Bacteria 73299
142 Ga0207684_10004311 3300025910 Bacteria 13460
143 Ga0207684_10027249 3300025910 Bacteria 4870
144 Ga0207684_10058844 3300025910 Bacteria 3261
145 Ga0207684_10066523 3300025910 Bacteria 3061
146 Ga0207693_10009913 3300025915 Bacteria 7746
147 Ga0207693_10027759 3300025915 Bacteria 4474
148 Ga0207693_10103531 3300025915 Bacteria 2233
149 Ga0207693_10117103 3300025915 Bacteria 2091
150 Ga0207663_10069375 3300025916 Bacteria 2267
151 Ga0207663_10084990 3300025916 Bacteria 2082
152 Ga0207660_10191897 3300025917 Bacteria 1591
153 Ga0207662_10024936 3300025918 Unclassified 3443
154 Ga0207657_10081876 3300025919 Bacteria 2710
155 Ga0207646_10002875 3300025922 Bacteria 19978
156 Ga0207646_10008626 3300025922 Bacteria 10189
157 Ga0207646_10009496 3300025922 Bacteria 9610
158 Ga0207646_10012516 3300025922 Bacteria 8147
159 Ga0207646_10017963 3300025922 Bacteria 6606
160 Ga0207646_10034780 3300025922 Unclassified 4554
161 Ga0207646_10063264 3300025922 Bacteria 3304
162 Ga0207646_10089273 3300025922 Bacteria 2759
163 Ga0207646_10168781 3300025922 Bacteria 1976
164 Ga0207646_10185112 3300025922 Bacteria 1881
165 Ga0207646_10450070 3300025922 Bacteria 1162
166 Ga0207681_10033724 3300025923 Bacteria 3359
167 Ga0207659_10011561 3300025926 Bacteria 5580
168 Ga0207700_10161239 3300025928 Unclassified 1863
169 Ga0207700_10183535 3300025928 Bacteria 1753
170 Ga0207700_10285511 3300025928 Bacteria 1421
171 Ga0207664_10347766 3300025929 Unclassified 1312
172 Ga0207690_10002316 3300025932 Bacteria 11611
173 Ga0207706_10018263 3300025933 Bacteria 6310
174 Ga0207706_10054066 3300025933 Bacteria 3544
175 Ga0207670_10014936 3300025936 Unclassified 4625
176 Ga0207670_10043140 3300025936 Unclassified 2976
177 Ga0207665_10010222 3300025939 Bacteria 6163
178 Ga0207665_10089148 3300025939 Bacteria 2136
179 Ga0207661_10023097 3300025944 Bacteria 4695
180 Ga0207651_10110609 3300025960 Unclassified 2061
181 Ga0207712_10393512 3300025961 Bacteria 1163
182 Ga0207668_10110240 3300025972 Bacteria 2063
183 Ga0207658_10027564 3300025986 Bacteria 3992
184 Ga0207678_10014488 3300026067 Bacteria 6931
185 Ga0207708_10017048 3300026075 Bacteria 5467
186 Ga0207641_10011667 3300026088 Bacteria 7216
187 Ga0207641_10370081 3300026088 Unclassified 1370
188 Ga0207675_100282047 3300026118 Bacteria 1614
189 Ga0207683_10010943 3300026121 Bacteria 7737
190 Ga0207683_10101576 3300026121 Unclassified 2568
191 Ga0268266_10114361 3300028379 Bacteria 2394
192 Ga0268266_10229446 3300028379 Bacteria 1709
193 Ga0268264_10029260 3300028381 Unclassified 4510
194 Ga0373955_0072987 3300035172 Unclassified 1923
195 Ga0373924_0032339 3300035410 Bacteria 2108
196 Ga0373935_0020335 3300035692 Bacteria 4055
197 Ga0373933_0169211 3300035724 Bacteria 1390
198 Ga0373947_0035911 3300035725 Bacteria 2937
199 Ga0373937_0173868 3300036401 Bacteria 2021
200 Ga0373925_0235447 3300037068 Bacteria 1465
201 Ga0395900_0010593 3300037418 Bacteria 9429
202 Ga0395900_0234344 3300037418 Bacteria 1845
203 Ga0395898_0018444 3300037466 Bacteria 7115
204 Ga0395905_0080530 3300037471 Bacteria 3052
205 Ga0395901_0125508 3300038443 Bacteria 2697
206 Ga0395901_0147460 3300038443 Bacteria 2473
207 Ga0436365_0983139 3300039437 Bacteria 4224
208 Ga0439455_0002807 3300042012 Bacteria 3233
209 Ga0495592_0010031 3300046454 Bacteria 7136
210 Ga0495603_0136913 3300046455 Bacteria 1425
211 Ga0495664_0111132 3300046477 Bacteria 1654
212 Ga0495630_0238200 3300046517 Bacteria 1390
213 Ga0495586_0040445 3300046535 Unclassified 2508
214 Ga0495645_0004102 3300046543 Bacteria 9947
215 Ga0495599_0008702 3300046678 Bacteria 6179
216 Ga0495623_0095030 3300046679 Bacteria 1822
217 Ga0495646_0058221 3300046680 Bacteria 2310
218 Ga0495624_0044458 3300046690 Bacteria 2831
219 Ga0495581_0038347 3300047315 Bacteria 2773
220 Ga0495604_0088824 3300047317 Bacteria 2298
221 Ga0495674_0267542 3300047319 Bacteria 1403
222 Ga0495602_0052318 3300048088 Bacteria 3628
223 Ga0496100_0164972 3300048903 Bacteria 1591
224 Ga0496104_0101816 3300048907 Bacteria 2750
225 Ga0496104_0311581 3300048907 Bacteria 1487
226 Ga0496105_0035759 3300048908 Bacteria 4090
227 Ga0496106_0032847 3300048909 Unclassified 3870
228 Ga0496108_0007925 3300048911 Bacteria 8611
229 Ga0496109_0027065 3300048912 Bacteria 5117
230 Ga0496111_0018806 3300048914 Unclassified 4790
231 Ga0496113_0029725 3300048916 Bacteria 3949
232 Ga0496114_0030454 3300048917 Unclassified 4440
233 Ga0496115_0017896 3300048918 Bacteria 5428
234 Ga0496115_0038861 3300048918 Bacteria 3779
235 nmdc:mga05p37_407357_c1 3300050507 Bacteria 1586
236 nmdc:mga05p37_8260_c2 3300050507 Bacteria 7072
237 nmdc:mga0n895_87681_c1 3300050512 Unclassified 3110
238 nmdc:mga08x19_142195_c1 3300050514 Bacteria 1621
239 Ga0495601_0001379 3300053077 Bacteria 13375
240 Ga0495612_0049926 3300053078 Bacteria 1717
241 Ga0495619_0172481 3300053085 Unclassified 1496
242 Ga0395901_0090063
243 JGI25405J52794_10009247
244 JGI25405J52794_10026520
245 Ga0065704_10028481
246 Ga0065712_10001462
247 Ga0065712_10005678
248 Ga0065715_10024405
249 Ga0065715_10092720
250 Ga0065707_10156150
251 Ga0070683_100005860
252 Ga0070683_100013716
253 Ga0070683_100088975
254 Ga0070690_100229082
255 Ga0070670_100197603
256 Ga0070666_10166314
257 Ga0070666_10243329
258 Ga0070680_100332950
259 Ga0070682_100063222
260 Ga0070689_100014664
261 Ga0070687_100018571
262 Ga0070661_100036082
263 Ga0070675_100001481
264 Ga0070675_100004168
265 Ga0070671_100193640
266 Ga0070688_100008031
267 Ga0070659_100002887
268 Ga0070667_100129770
269 Ga0070709_10033723
270 Ga0070714_100104494
271 Ga0070713_100015318
272 Ga0070710_10059614
273 Ga0070710_10083994
274 Ga0070700_100012335
275 Ga0070708_100029820
276 Ga0070708_100041955
277 Ga0070708_100112050
278 Ga0070708_100439631
279 Ga0070663_100072850
280 Ga0070663_100365951
281 Ga0070678_100178780
282 Ga0070662_100047419
283 Ga0070681_10228917
284 Ga0070685_10013373
285 Ga0070685_10021174
286 Ga0070706_100000473
287 Ga0070706_100005173
288 Ga0070706_100020032
289 Ga0070706_100125035
290 Ga0070706_100178797
291 Ga0070706_100218061
292 Ga0070706_100230673
293 Ga0070707_100005178
294 Ga0070707_100009008
295 Ga0070707_100013587
296 Ga0070707_100018985
297 Ga0070707_100026373
298 Ga0070707_100033019
299 Ga0070707_100047780
300 Ga0070707_100071096
301 Ga0070707_100178968
302 Ga0070698_100062428
303 Ga0070698_100119846
304 Ga0070699_100187709
305 Ga0070699_100231223
306 Ga0070679_100183004
307 Ga0070684_100000230
308 Ga0070684_100093395
309 Ga0070684_100243677
310 Ga0070697_100002272
311 Ga0070697_100009591
312 Ga0070697_100021662
313 Ga0070697_100066798
314 Ga0070697_100082933
315 Ga0070697_100109909
316 Ga0070697_100133030
317 Ga0070697_100160290
318 Ga0070672_100160621
319 Ga0070686_100024975
320 Ga0070665_100021945
321 Ga0070704_100006870
322 Ga0070664_100049602
323 Ga0068856_100022135
324 Ga0068859_100026245
325 Ga0068859_100436240
326 Ga0068863_100063746
327 Ga0068858_100025321
328 Ga0081455_10001298
329 Ga0081455_10001670
330 Ga0081455_10009029
331 Ga0081455_10014704
332 Ga0081455_10021262
333 Ga0081455_10079653
334 Ga0081455_10114521
335 Ga0081455_10178079
336 Ga0081540_1003702
337 Ga0081540_1063027
338 Ga0081539_10103195
339 Ga0070717_10013727
340 Ga0070717_10019031
341 Ga0070717_10020747
342 Ga0070717_10034644
343 Ga0070717_10086191
344 Ga0070717_10100176
345 Ga0070716_100005530
346 Ga0070712_100194457
347 Ga0075428_100114987
348 Ga0097620_100026245
349 Ga0097620_100436234
350 Ga0105245_10272397
351 Ga0114129_10033833
352 Ga0114129_10143324
353 Ga0114129_10181892
354 Ga0105249_10064004
355 Ga0105249_10150979
356 Ga0105239_10022350
357 Ga0105239_10022717
358 Ga0105239_10338611
359 Ga0157374_10008128
360 Ga0157374_10097981
361 Ga0157374_10209242
362 Ga0157378_10041622
363 Ga0157378_10351468
364 Ga0163162_10084777
365 Ga0157375_10005355
366 Ga0157375_10054375
367 Ga0163163_10065339
368 Ga0157379_10014554
369 Ga0157376_10134457
370 Ga0157376_10241108
371 Ga0207666_1000110
372 Ga0207673_1002234
373 Ga0207697_10000496
374 Ga0207697_10001359
375 Ga0207697_10003954
376 Ga0207697_10021030
377 Ga0207697_10025894
378 Ga0207653_10023838
379 Ga0207653_10067887
380 Ga0207699_10093560
381 Ga0207645_10000820
382 Ga0207684_10000285
383 Ga0207684_10004311
384 Ga0207684_10027249
385 Ga0207684_10058844
386 Ga0207684_10066523
387 Ga0207693_10009913
388 Ga0207693_10027759
389 Ga0207693_10103531
390 Ga0207693_10117103
391 Ga0207663_10069375
392 Ga0207663_10084990
393 Ga0207660_10191897
394 Ga0207662_10024936
395 Ga0207657_10081876
396 Ga0207646_10002875
397 Ga0207646_10008626
398 Ga0207646_10009496
399 Ga0207646_10012516
400 Ga0207646_10017963
401 Ga0207646_10034780
402 Ga0207646_10063264
403 Ga0207646_10089273
404 Ga0207646_10168781
405 Ga0207646_10185112
406 Ga0207646_10450070
407 Ga0207681_10033724
408 Ga0207659_10011561
409 Ga0207700_10161239
410 Ga0207700_10183535
411 Ga0207700_10285511
412 Ga0207664_10347766
413 Ga0207690_10002316
414 Ga0207706_10018263
415 Ga0207706_10054066
416 Ga0207670_10014936
417 Ga0207670_10043140
418 Ga0207665_10010222
419 Ga0207665_10089148
420 Ga0207661_10023097
421 Ga0207651_10110609
422 Ga0207712_10393512
423 Ga0207668_10110240
424 Ga0207658_10027564
425 Ga0207678_10014488
426 Ga0207708_10017048
427 Ga0207641_10011667
428 Ga0207641_10370081
429 Ga0207675_100282047
430 Ga0207683_10010943
431 Ga0207683_10101576
432 Ga0268266_10114361
433 Ga0268266_10229446
434 Ga0268264_10029260
435 Ga0373955_0072987
436 Ga0373924_0032339
437 Ga0373935_0020335
438 Ga0373933_0169211
439 Ga0373947_0035911
440 Ga0373937_0173868
441 Ga0373925_0235447
442 Ga0395900_0010593
443 Ga0395900_0234344
444 Ga0395898_0018444
445 Ga0395905_0080530
446 Ga0395901_0125508
447 Ga0395901_0147460
448 Ga0436365_0983139
449 Ga0439455_0002807
450 Ga0495592_0010031
451 Ga0495603_0136913
452 Ga0495664_0111132
453 Ga0495630_0238200
454 Ga0495586_0040445
455 Ga0495645_0004102
456 Ga0495599_0008702
457 Ga0495623_0095030
458 Ga0495646_0058221
459 Ga0495624_0044458
460 Ga0495581_0038347
461 Ga0495604_0088824
462 Ga0495674_0267542
463 Ga0495602_0052318
464 Ga0496100_0164972
465 Ga0496104_0101816
466 Ga0496104_0311581
467 Ga0496105_0035759
468 Ga0496106_0032847
469 Ga0496108_0007925
470 Ga0496109_0027065
471 Ga0496111_0018806
472 Ga0496113_0029725
473 Ga0496114_0030454
474 Ga0496115_0017896
475 Ga0496115_0038861
476 nmdc:mga05p37_407357_c1
477 nmdc:mga05p37_8260_c2
478 nmdc:mga0n895_87681_c1
479 nmdc:mga08x19_142195_c1
480 Ga0495601_0001379
481 Ga0495612_0049926
482 Ga0495619_0172481

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13177

DNA_pol3_delta2

DNA polymerase III, delta subunit

4

154

0.93

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

25

151

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1iqp-assembly1.cif.gz_F crystal structure of the clamp loader small subunit from pyrococcus furiosus 0.7483 2 174
8fs4-assembly1.cif.gz_B structure of s. cerevisiae rad24-rfc loading the 9-1-1 clamp onto a 10-nt gapped dna in step 2 (open 9-1-1 ring and flexibly bound chamber dna) 0.7471 6 173
2chg-assembly3.cif.gz_C replication factor c domains 1 and 2 0.7361 7 171
1njf-assembly4.cif.gz_D nucleotide bound form of an isolated e. coli clamp loader gamma subunit 0.7281 5 173
3pfi-assembly1.cif.gz_B 2.7 angstrom resolution crystal structure of a probable holliday junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni nctc 11168 in complex with adenosine-5'-diphosphate 0.6905 7 171
ID Description Score Start End Superfamily
1xxhJ03 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9148 227 299 1.20.272.10
af_P28631_208_329_1.20.272.10 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9115 227 299 1.20.272.10
1xxhE03 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9064 227 299 1.20.272.10
1xxhJ01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.885 1 147 3.40.50.300
3gliB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8627 2 151 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2V6A241-F1-model_v4 DNA polymerase III subunit delta 0.9827 1 123 GO:0006261
GO:0016740
AF-A0A2V6A241-F1-model_v4 DNA polymerase III subunit delta 0.9749 1 123 GO:0006261
GO:0016740
AF-A0A3C1BVL6-F1-model_v4 DNA polymerase III subunit gamma/tau 0.945 76 149 GO:0006261
AF-A0A352NGR5-F1-model_v4 DNA polymerase III subunit delta 0.9125 52 145 GO:0006261
GO:0016740
AF-A0A525W363-F1-model_v4 DNA polymerase III subunit delta (EC 2.7.7.7) 0.8722 10 155 GO:0000049
GO:0003887
GO:0006261
GO:0008408

Map