F353961

General Info

Members Datasets Scaffolds Average Seq Length
241 152 240 165

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0129526|Ga0436364_0129526_328_903
Length 191
Sequence LRCVPFTQELGDPICDPLHLQSERESMAEGLFRRLGSRGHAAGKAFAVALDEEEWRRKLSPAQYRVLREHGTERAGSSPLDKQYGAGIYHCAGCGQPLFSSDTKFNSGTGWPSFWAPLDEAVETETDRSFFMTRTEVHCGHCGGHLGHVFDDGPQPTGQRYCMNGVSLDFHAGETPPSTTDESTSNPAAKP

Samples

Sample ID Description Type Environment
1 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
2 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003308 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003544 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
6 3300003735 Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_23 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300004785 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
8 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
9 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
47 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
52 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
53 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300023438 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B2.stcc Metatranscriptome Rhizosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300029283 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B2.ctno.R1 Metatranscriptome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
81 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
82 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
83 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
85 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
86 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
87 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
88 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
89 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
90 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
91 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
92 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
93 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
94 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
95 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
101 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
102 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
103 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
104 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
105 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
106 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
107 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
108 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
109 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
110 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
111 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
112 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
113 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
114 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
115 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
116 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
117 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
121 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
127 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
147 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
148 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.12
Metatranscriptomes 7.47
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.66
Nodule 0
Rhizoplane 5.39
Rhizosphere 84.23
Stem 0
Stem Tuber 0
Unclassified 8.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006778J45830_1050194 3300003162 Bacteria 703
2 Ga0006777J48905_1052449 3300003308 Bacteria 685
3 Ga0007417J51691_1036045 3300003544 Bacteria 720
4 Ga0032354_1042902 3300003693 Bacteria 526
5 Ga0032354_1084778 3300003693 Bacteria 922
6 Ga0006780_1020035 3300003735 Bacteria 702
7 Ga0058858_1355378 3300004785 Bacteria 554
8 Ga0058860_12025799 3300004801 Bacteria 871
9 Ga0058860_12102716 3300004801 Bacteria 548
10 Ga0058860_12121498 3300004801 Bacteria 689
11 Ga0058862_12597798 3300004803 Bacteria 568
12 Ga0070670_100147474 3300005331 Bacteria 2036
13 Ga0070666_10462604 3300005335 Bacteria 917
14 Ga0070682_100950285 3300005337 Bacteria 710
15 Ga0070668_100874771 3300005347 Bacteria 802
16 Ga0070669_100617825 3300005353 Bacteria 909
17 Ga0070675_100336021 3300005354 Bacteria 1337
18 Ga0070671_100011650 3300005355 Bacteria 7074
19 Ga0070671_100477865 3300005355 Bacteria 1070
20 Ga0070688_101007155 3300005365 Bacteria 662
21 Ga0070709_10027405 3300005434 Bacteria 3387
22 Ga0070714_100149754 3300005435 Bacteria 2102
23 Ga0070714_100280541 3300005435 Bacteria 1548
24 Ga0070714_100795975 3300005435 Bacteria 915
25 Ga0070713_100020221 3300005436 Bacteria 5099
26 Ga0070713_100062109 3300005436 Bacteria 3128
27 Ga0070713_100142646 3300005436 Bacteria 2123
28 Ga0070713_100313866 3300005436 Bacteria 1446
29 Ga0070710_10027209 3300005437 Bacteria 3047
30 Ga0070710_10034683 3300005437 Bacteria 2746
31 Ga0070710_10808914 3300005437 Bacteria 670
32 Ga0070711_100104011 3300005439 Bacteria 2071
33 Ga0070711_100135102 3300005439 Bacteria 1842
34 Ga0070708_100263158 3300005445 Bacteria 1621
35 Ga0070681_10110231 3300005458 Bacteria 2692
36 Ga0070685_10641275 3300005466 Bacteria 769
37 Ga0070706_100028641 3300005467 Bacteria 5129
38 Ga0070706_100446014 3300005467 Bacteria 1204
39 Ga0070707_100065460 3300005468 Bacteria 3491
40 Ga0070707_100265996 3300005468 Bacteria 1668
41 Ga0070707_100284712 3300005468 Bacteria 1606
42 Ga0070698_100001445 3300005471 Bacteria 26365
43 Ga0070698_100073532 3300005471 Bacteria 3424
44 Ga0070699_100070592 3300005518 Bacteria 3036
45 Ga0070679_100158854 3300005530 Bacteria 2235
46 Ga0070697_100027946 3300005536 Bacteria 4515
47 Ga0070697_100307350 3300005536 Bacteria 1364
48 Ga0070686_100338080 3300005544 Bacteria 1127
49 Ga0068856_100160656 3300005614 Bacteria 2257
50 Ga0068864_100381230 3300005618 Bacteria 1336
51 Ga0068863_100556326 3300005841 Bacteria 1133
52 Ga0068858_100349022 3300005842 Bacteria 1417
53 Ga0068858_101004576 3300005842 Bacteria 817
54 Ga0070717_10000593 3300006028 Bacteria 23195
55 Ga0070717_10088400 3300006028 Bacteria 2611
56 Ga0070717_10124792 3300006028 Bacteria 2209
57 Ga0075365_10083145 3300006038 Bacteria 2172
58 Ga0070715_10213230 3300006163 Bacteria 988
59 Ga0070712_100097215 3300006175 Bacteria 2169
60 Ga0075436_100144754 3300006914 Bacteria 1671
61 Ga0075435_100440863 3300007076 Bacteria 1123
62 Ga0099795_10009004 3300007788 Bacteria 2878
63 Ga0099795_10010044 3300007788 Bacteria 2772
64 Ga0105248_10491818 3300009177 Bacteria 1383
65 Ga0105249_10726137 3300009553 Bacteria 1055
66 Ga0099796_10000830 3300010159 Bacteria 5639
67 Ga0099796_10175061 3300010159 Bacteria 858
68 Ga0182008_10023810 3300014497 Bacteria 3121
69 Ga0157379_10296677 3300014968 Bacteria 1473
70 Ga0157379_10815746 3300014968 Bacteria 881
71 Ga0197907_10502736 3300020069 Bacteria 1052
72 Ga0206350_11251503 3300020080 Bacteria 830
73 Ga0213875_10000114 3300021388 Bacteria 91363
74 Ga0213875_10002292 3300021388 Bacteria 11593
75 Ga0213871_10084557 3300021441 Bacteria 913
76 Ga0213871_10125668 3300021441 Bacteria 767
77 Ga0224712_10024686 3300022467 Bacteria 2103
78 Ga0256720_105353 3300023438 Bacteria 562
79 Ga0207692_10013333 3300025898 Bacteria 3563
80 Ga0207692_10035924 3300025898 Bacteria 2411
81 Ga0207699_10249148 3300025906 Bacteria 1223
82 Ga0207684_10564105 3300025910 Bacteria 973
83 Ga0207707_10150095 3300025912 Bacteria 2038
84 Ga0207707_10728675 3300025912 Bacteria 831
85 Ga0207693_10000809 3300025915 Bacteria 27963
86 Ga0207693_10035942 3300025915 Bacteria 3905
87 Ga0207693_10086881 3300025915 Bacteria 2450
88 Ga0207693_10830501 3300025915 Bacteria 711
89 Ga0207663_10104491 3300025916 Bacteria 1910
90 Ga0207652_10118089 3300025921 Bacteria 2357
91 Ga0207646_10120351 3300025922 Bacteria 2358
92 Ga0207646_10239022 3300025922 Bacteria 1641
93 Ga0207646_10290552 3300025922 Bacteria 1477
94 Ga0207681_10371140 3300025923 Bacteria 1150
95 Ga0207681_10502255 3300025923 Bacteria 993
96 Ga0207700_10024482 3300025928 Bacteria 4178
97 Ga0207700_10217881 3300025928 Bacteria 1617
98 Ga0207700_10311756 3300025928 Bacteria 1361
99 Ga0207664_10060253 3300025929 Bacteria 3025
100 Ga0207664_10226715 3300025929 Bacteria 1623
101 Ga0207664_10253518 3300025929 Bacteria 1537
102 Ga0207664_10767994 3300025929 Bacteria 867
103 Ga0207644_10197459 3300025931 Bacteria 1585
104 Ga0207644_10321412 3300025931 Bacteria 1251
105 Ga0207665_10151323 3300025939 Bacteria 1662
106 Ga0207711_10679388 3300025941 Bacteria 960
107 Ga0207651_10419016 3300025960 Bacteria 1143
108 Ga0207703_11087220 3300026035 Bacteria 768
109 Ga0207703_11358418 3300026035 Bacteria 683
110 Ga0207702_10055022 3300026078 Bacteria 3373
111 Ga0207641_11910802 3300026088 Bacteria 595
112 Ga0207676_10491174 3300026095 Bacteria 1164
113 Ga0207676_11166016 3300026095 Bacteria 763
114 Ga0207676_11622600 3300026095 Bacteria 645
115 Ga0209179_1001313 3300027512 Bacteria 3000
116 Ga0310982_145066 3300029283 Bacteria 538
117 Ga0307410_10684024 3300031852 Bacteria 863
118 Ga0307410_11043429 3300031852 Bacteria 706
119 Ga0307407_10570803 3300031903 Bacteria 839
120 Ga0307412_11315985 3300031911 Bacteria 651
121 Ga0307412_11958922 3300031911 Bacteria 542
122 Ga0307416_100357118 3300032002 Bacteria 1482
123 Ga0307415_100051168 3300032126 Bacteria 2802
124 Ga0373926_0088882 3300035083 Bacteria 1147
125 Ga0373944_0003402 3300035089 Bacteria 4101
126 Ga0373923_0084762 3300035111 Unclassified 1379
127 Ga0373945_0074162 3300035116 Bacteria 1293
128 Ga0373953_0023053 3300035117 Bacteria 2354
129 Ga0373953_0056323 3300035117 Unclassified 1598
130 Ga0373954_0057267 3300035118 Bacteria 1835
131 Ga0373954_0078033 3300035118 Unclassified 1580
132 Ga0373954_0495029 3300035118 Bacteria 606
133 Ga0373957_0154344 3300035120 Unclassified 943
134 Ga0373957_0361398 3300035120 Bacteria 621
135 Ga0373943_0071387 3300035170 Bacteria 1759
136 Ga0373943_0143086 3300035170 Unclassified 1290
137 Ga0373955_0006560 3300035172 Bacteria 5308
138 Ga0373962_0214037 3300035242 Bacteria 657
139 Ga0373931_0043397 3300035691 Bacteria 2368
140 Ga0373935_0151015 3300035692 Unclassified 1576
141 Ga0373927_0136515 3300035695 Bacteria 1603
142 Ga0373933_0013693 3300035724 Bacteria 4499
143 Ga0373933_0015815 3300035724 Bacteria 4210
144 Ga0373947_0029723 3300035725 Bacteria 3207
145 Ga0373947_0765334 3300035725 Bacteria 659
146 Ga0373937_0014164 3300036401 Bacteria 7033
147 Ga0373937_0019172 3300036401 Bacteria 6123
148 Ga0373937_0415027 3300036401 Bacteria 1277
149 Ga0373937_1652009 3300036401 Bacteria 588
150 Ga0373925_0009276 3300037068 Bacteria 7161
151 Ga0373925_0206837 3300037068 Bacteria 1562
152 Ga0373925_0256794 3300037068 Bacteria 1403
153 Ga0373925_0466546 3300037068 Unclassified 1035
154 Ga0373925_0933896 3300037068 Bacteria 715
155 Ga0436364_0023890 3300037853 Bacteria 646
156 Ga0436364_0129526 3300037853 Bacteria 1185
157 Ga0436364_0385125 3300037853 Bacteria 1359
158 Ga0436364_0516241 3300037853 Bacteria 31154
159 Ga0436364_1352562 3300037853 Bacteria 66743
160 Ga0436365_0028650 3300039437 Bacteria 2349
161 Ga0436365_0240648 3300039437 Bacteria 565
162 Ga0436365_1207032 3300039437 Bacteria 1149
163 Ga0436365_1659896 3300039437 Bacteria 918
164 Ga0436365_1712644 3300039437 Bacteria 1432
165 Ga0436360_0028198 3300039438 Bacteria 1620
166 Ga0436360_0213485 3300039438 Bacteria 1559
167 Ga0436360_0269637 3300039438 Bacteria 1103
168 Ga0436360_1130515 3300039438 Bacteria 1665
169 Ga0436360_1140186 3300039438 Bacteria 551
170 Ga0436360_1282991 3300039438 Bacteria 5125
171 Ga0436361_0364771 3300039447 Bacteria 1379
172 Ga0436361_0800115 3300039447 Bacteria 977
173 Ga0436361_0816216 3300039447 Bacteria 1103
174 Ga0436363_0092769 3300039450 Bacteria 1697
175 Ga0436363_0347546 3300039450 Bacteria 1179
176 Ga0436363_0778502 3300039450 Bacteria 884
177 Ga0436363_1293864 3300039450 Bacteria 1146
178 Ga0436363_1633130 3300039450 Bacteria 949
179 Ga0436362_0288439 3300039453 Bacteria 1817
180 Ga0436362_0522534 3300039453 Bacteria 672
181 Ga0436362_0715683 3300039453 Bacteria 4918
182 Ga0453683_0008225 3300044673 Bacteria 7014
183 Ga0495592_0007532 3300046454 Bacteria 8152
184 Ga0495629_0427224 3300046459 Bacteria 899
185 Ga0495651_0111040 3300046462 Unclassified 2027
186 Ga0495653_0077483 3300046463 Unclassified 2468
187 Ga0495580_0042044 3300046472 Bacteria 3257
188 Ga0495608_0235772 3300046511 Unclassified 1144
189 Ga0495618_0449367 3300046514 Unclassified 782
190 Ga0495628_0015430 3300046516 Bacteria 6378
191 Ga0495652_0118461 3300046529 Unclassified 2116
192 Ga0495640_0056784 3300046533 Bacteria 2673
193 Ga0495640_0072022 3300046533 Unclassified 2317
194 Ga0495587_0015912 3300046536 Bacteria 4685
195 Ga0495587_0129619 3300046536 Bacteria 1442
196 Ga0495645_0017325 3300046543 Bacteria 5160
197 Ga0495667_0136847 3300046559 Bacteria 1579
198 Ga0495657_0259917 3300046675 Unclassified 1043
199 Ga0495599_0012599 3300046678 Bacteria 5214
200 Ga0495623_0076115 3300046679 Unclassified 2082
201 Ga0495646_0286801 3300046680 Unclassified 873
202 Ga0495604_0015423 3300047317 Bacteria 6099
203 Ga0495680_0015169 3300047322 Bacteria 6654
204 Ga0495680_0223122 3300047322 Unclassified 1344
205 Ga0495593_0093634 3300047673 Bacteria 1546
206 Ga0495602_0011643 3300048088 Bacteria 9085
207 Ga0496100_0085742 3300048903 Bacteria 2138
208 Ga0496103_0485420 3300048906 Bacteria 791
209 Ga0496104_0047465 3300048907 Bacteria 4047
210 Ga0496105_0029167 3300048908 Bacteria 4516
211 Ga0496107_0155722 3300048910 Bacteria 1692
212 Ga0496109_0243156 3300048912 Bacteria 1694
213 Ga0496111_0202903 3300048914 Bacteria 1474
214 Ga0496112_0057203 3300048915 Bacteria 3839
215 Ga0496112_0067890 3300048915 Bacteria 3520
216 Ga0496113_0196573 3300048916 Bacteria 1602
217 Ga0496113_0416914 3300048916 Bacteria 1078
218 Ga0496114_0461610 3300048917 Bacteria 1124
219 Ga0496115_0176025 3300048918 Bacteria 1769
220 Ga0501315_029004 3300049531 Bacteria 788
221 Ga0501317_021992 3300049533 Bacteria 871
222 Ga0501070_0986643 3300049586 Bacteria 654
223 Ga0501208_123795 3300049655 Bacteria 572
224 Ga0501080_1439244 3300049742 Bacteria 587
225 nmdc:mga0yw44_218862_c1 3300050492 Bacteria 1261
226 nmdc:mga08y16_82191_c1 3300050511 Bacteria 3358
227 nmdc:mga0n895_1293004_c1 3300050512 Bacteria 700
228 nmdc:mga0rr50_1386615_c1 3300050513 Bacteria 595
229 Ga0495601_0009486 3300053077 Bacteria 5759
230 Ga0495601_0099790 3300053077 Bacteria 1874
231 Ga0495601_0557099 3300053077 Bacteria 737
232 Ga0495612_0002844 3300053078 Bacteria 7163
233 Ga0495612_0016388 3300053078 Bacteria 2970
234 Ga0495595_0052408 3300053084 Bacteria 1893
235 Ga0495595_0207407 3300053084 Bacteria 976
236 Ga0495619_0000468 3300053085 Bacteria 27254
237 Ga0495619_0007948 3300053085 Bacteria 6712
238 Ga0500616_0018658 3300053153 Bacteria 3919
239 Ga0500645_067048 3300053730 Bacteria 1033
240 Ga0501082_0145843 3300060353 Bacteria 2055

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039450 Ga0436363_1633130 Ga0436363_1633130_109_570 136
2 3300005458 Ga0070681_10110231 Ga0070681_101102313 144
3 3300005530 Ga0070679_100158854 Ga0070679_1001588541 144
4 3300020069 Ga0197907_10502736 Ga0197907_105027362 144
5 3300020080 Ga0206350_11251503 Ga0206350_112515032 144
6 3300022467 Ga0224712_10024686 Ga0224712_100246862 144
7 3300025912 Ga0207707_10150095 Ga0207707_101500953 144
8 3300025921 Ga0207652_10118089 Ga0207652_101180892 144
9 3300039438 Ga0436360_1282991 Ga0436360_1282991_3567_4037 145
10 3300039438 Ga0436360_1140186 Ga0436360_1140186_26_526 147
11 3300005331 Ga0070670_100147474 Ga0070670_1001474741 148
12 3300005354 Ga0070675_100336021 Ga0070675_1003360211 148
13 3300005355 Ga0070671_100011650 Ga0070671_1000116506 148
14 3300005434 Ga0070709_10027405 Ga0070709_100274053 148
15 3300005435 Ga0070714_100149754 Ga0070714_1001497542 148
16 3300005435 Ga0070714_100280541 Ga0070714_1002805413 148
17 3300005435 Ga0070714_100795975 Ga0070714_1007959751 148
18 3300005436 Ga0070713_100020221 Ga0070713_1000202213 148
19 3300005436 Ga0070713_100062109 Ga0070713_1000621091 148
20 3300005436 Ga0070713_100142646 Ga0070713_1001426463 148
21 3300005437 Ga0070710_10027209 Ga0070710_100272092 148
22 3300005437 Ga0070710_10034683 Ga0070710_100346833 148
23 3300005437 Ga0070710_10808914 Ga0070710_108089142 148
24 3300005439 Ga0070711_100104011 Ga0070711_1001040112 148
25 3300005439 Ga0070711_100135102 Ga0070711_1001351021 148
26 3300005467 Ga0070706_100028641 Ga0070706_1000286415 148
27 3300005468 Ga0070707_100265996 Ga0070707_1002659962 148
28 3300005468 Ga0070707_100284712 Ga0070707_1002847121 148
29 3300005471 Ga0070698_100001445 Ga0070698_10000144517 148
30 3300005536 Ga0070697_100027946 Ga0070697_1000279463 148
31 3300005841 Ga0068863_100556326 Ga0068863_1005563262 148
32 3300006028 Ga0070717_10000593 Ga0070717_1000059312 148
33 3300006028 Ga0070717_10088400 Ga0070717_100884003 148
34 3300006038 Ga0075365_10083145 Ga0075365_100831451 148
35 3300006163 Ga0070715_10213230 Ga0070715_102132302 148
36 3300006175 Ga0070712_100097215 Ga0070712_1000972152 148
37 3300007788 Ga0099795_10010044 Ga0099795_100100443 148
38 3300010159 Ga0099796_10175061 Ga0099796_101750611 148
39 3300021388 Ga0213875_10000114 Ga0213875_100001146 148
40 3300021388 Ga0213875_10002292 Ga0213875_100022923 148
41 3300021441 Ga0213871_10084557 Ga0213871_100845571 148
42 3300025898 Ga0207692_10013333 Ga0207692_100133333 148
43 3300025898 Ga0207692_10035924 Ga0207692_100359243 148
44 3300025910 Ga0207684_10564105 Ga0207684_105641052 148
45 3300025915 Ga0207693_10000809 Ga0207693_1000080914 148
46 3300025915 Ga0207693_10035942 Ga0207693_100359423 148
47 3300025915 Ga0207693_10086881 Ga0207693_100868813 148
48 3300025922 Ga0207646_10239022 Ga0207646_102390222 148
49 3300025922 Ga0207646_10290552 Ga0207646_102905522 148
50 3300025929 Ga0207664_10060253 Ga0207664_100602532 148
51 3300025929 Ga0207664_10226715 Ga0207664_102267152 148
52 3300025929 Ga0207664_10253518 Ga0207664_102535182 148
53 3300025929 Ga0207664_10767994 Ga0207664_107679942 148
54 3300025931 Ga0207644_10197459 Ga0207644_101974593 148
55 3300026088 Ga0207641_11910802 Ga0207641_119108021 148
56 3300035117 Ga0373953_0023053 Ga0373953_0023053_1685_2188 148
57 3300035118 Ga0373954_0057267 Ga0373954_0057267_1221_1724 148
58 3300035724 Ga0373933_0015815 Ga0373933_0015815_3480_3983 148
59 3300037853 Ga0436364_0385125 Ga0436364_0385125_105_587 148
60 3300037853 Ga0436364_0516241 Ga0436364_0516241_20733_21224 148
61 3300037853 Ga0436364_1352562 Ga0436364_1352562_5536_6030 148
62 3300039437 Ga0436365_0240648 Ga0436365_0240648_56_550 148
63 3300039437 Ga0436365_1659896 Ga0436365_1659896_52_549 148
64 3300039438 Ga0436360_0028198 Ga0436360_0028198_775_1260 148
65 3300039438 Ga0436360_0269637 Ga0436360_0269637_401_889 148
66 3300039447 Ga0436361_0800115 Ga0436361_0800115_361_849 148
67 3300039447 Ga0436361_0816216 Ga0436361_0816216_63_551 148
68 3300039450 Ga0436363_0092769 Ga0436363_0092769_150_647 148
69 3300039450 Ga0436363_0347546 Ga0436363_0347546_558_1046 148
70 3300039450 Ga0436363_0778502 Ga0436363_0778502_237_725 148
71 3300039450 Ga0436363_1293864 Ga0436363_1293864_507_1004 148
72 3300039453 Ga0436362_0288439 Ga0436362_0288439_934_1422 148
73 3300039453 Ga0436362_0522534 Ga0436362_0522534_13_510 148
74 3300049742 Ga0501080_1439244 Ga0501080_1439244_76_567 148
75 3300050492 nmdc:mga0yw44_218862_c1 nmdc:mga0yw44_218862_c1_707_1192 148
76 3300050511 nmdc:mga08y16_82191_c1 nmdc:mga08y16_82191_c1_1830_2300 148
77 3300050512 nmdc:mga0n895_1293004_c1 nmdc:mga0n895_1293004_c1_98_595 148
78 3300053084 Ga0495595_0052408 Ga0495595_0052408_1117_1620 148
79 3300003693 Ga0032354_1084778 Ga0032354_10847782 149
80 3300005335 Ga0070666_10462604 Ga0070666_104626042 149
81 3300005337 Ga0070682_100950285 Ga0070682_1009502851 149
82 3300005353 Ga0070669_100617825 Ga0070669_1006178251 149
83 3300005355 Ga0070671_100477865 Ga0070671_1004778651 149
84 3300005365 Ga0070688_101007155 Ga0070688_1010071551 149
85 3300005436 Ga0070713_100313866 Ga0070713_1003138662 149
86 3300005445 Ga0070708_100263158 Ga0070708_1002631582 149
87 3300005467 Ga0070706_100446014 Ga0070706_1004460142 149
88 3300005468 Ga0070707_100065460 Ga0070707_1000654603 149
89 3300005471 Ga0070698_100073532 Ga0070698_1000735323 149
90 3300005518 Ga0070699_100070592 Ga0070699_1000705923 149
91 3300005536 Ga0070697_100307350 Ga0070697_1003073502 149
92 3300005544 Ga0070686_100338080 Ga0070686_1003380801 149
93 3300005842 Ga0068858_101004576 Ga0068858_1010045761 149
94 3300007788 Ga0099795_10009004 Ga0099795_100090043 149
95 3300009177 Ga0105248_10491818 Ga0105248_104918183 149
96 3300009553 Ga0105249_10726137 Ga0105249_107261372 149
97 3300010159 Ga0099796_10000830 Ga0099796_100008303 149
98 3300014497 Ga0182008_10023810 Ga0182008_100238103 149
99 3300014968 Ga0157379_10815746 Ga0157379_108157462 149
100 3300021441 Ga0213871_10125668 Ga0213871_101256682 149
101 3300025912 Ga0207707_10728675 Ga0207707_107286751 149
102 3300025915 Ga0207693_10830501 Ga0207693_108305011 149
103 3300025916 Ga0207663_10104491 Ga0207663_101044911 149
104 3300025922 Ga0207646_10120351 Ga0207646_101203513 149
105 3300025923 Ga0207681_10371140 Ga0207681_103711402 149
106 3300025923 Ga0207681_10502255 Ga0207681_105022552 149
107 3300025928 Ga0207700_10217881 Ga0207700_102178812 149
108 3300025931 Ga0207644_10321412 Ga0207644_103214121 149
109 3300025939 Ga0207665_10151323 Ga0207665_101513231 149
110 3300025941 Ga0207711_10679388 Ga0207711_106793881 149
111 3300025960 Ga0207651_10419016 Ga0207651_104190163 149
112 3300026035 Ga0207703_11087220 Ga0207703_110872202 149
113 3300026095 Ga0207676_11166016 Ga0207676_111660161 149
114 3300026095 Ga0207676_11622600 Ga0207676_116226001 149
115 3300027512 Ga0209179_1001313 Ga0209179_10013132 149
116 3300031911 Ga0307412_11958922 Ga0307412_119589221 149
117 3300035083 Ga0373926_0088882 Ga0373926_0088882_29_514 149
118 3300035089 Ga0373944_0003402 Ga0373944_0003402_2146_2631 149
119 3300035116 Ga0373945_0074162 Ga0373945_0074162_222_707 149
120 3300035118 Ga0373954_0495029 Ga0373954_0495029_91_579 149
121 3300035120 Ga0373957_0361398 Ga0373957_0361398_45_539 149
122 3300035170 Ga0373943_0071387 Ga0373943_0071387_518_1003 149
123 3300035242 Ga0373962_0214037 Ga0373962_0214037_60_524 149
124 3300035691 Ga0373931_0043397 Ga0373931_0043397_357_842 149
125 3300035725 Ga0373947_0029723 Ga0373947_0029723_2127_2612 149
126 3300036401 Ga0373937_0019172 Ga0373937_0019172_3426_3920 149
127 3300036401 Ga0373937_1652009 Ga0373937_1652009_87_578 149
128 3300037068 Ga0373925_0206837 Ga0373925_0206837_240_725 149
129 3300037068 Ga0373925_0256794 Ga0373925_0256794_536_1030 149
130 3300037853 Ga0436364_0023890 Ga0436364_0023890_51_518 149
131 3300039437 Ga0436365_1712644 Ga0436365_1712644_838_1305 149
132 3300039438 Ga0436360_0213485 Ga0436360_0213485_284_766 149
133 3300039438 Ga0436360_1130515 Ga0436360_1130515_149_640 149
134 3300039447 Ga0436361_0364771 Ga0436361_0364771_751_1242 149
135 3300039453 Ga0436362_0715683 Ga0436362_0715683_786_1277 149
136 3300046472 Ga0495580_0042044 Ga0495580_0042044_247_732 149
137 3300048915 Ga0496112_0067890 Ga0496112_0067890_2782_3270 149
138 3300048916 Ga0496113_0416914 Ga0496113_0416914_555_1040 149
139 3300050513 nmdc:mga0rr50_1386615_c1 nmdc:mga0rr50_1386615_c1_94_579 149
140 3300053084 Ga0495595_0207407 Ga0495595_0207407_450_944 149
141 iso_pu_bacteria 2829745981 2829746594 149
142 3300039437 Ga0436365_1207032 Ga0436365_1207032_560_1048 150
143 3300044673 Ga0453683_0008225 Ga0453683_0008225_4175_4666 150
144 3300005614 Ga0068856_100160656 Ga0068856_1001606563 151
145 3300006028 Ga0070717_10124792 Ga0070717_101247923 151
146 3300006914 Ga0075436_100144754 Ga0075436_1001447542 151
147 3300007076 Ga0075435_100440863 Ga0075435_1004408632 151
148 3300025928 Ga0207700_10311756 Ga0207700_103117562 151
149 3300026078 Ga0207702_10055022 Ga0207702_100550223 151
150 3300035117 Ga0373953_0056323 Ga0373953_0056323_1070_1576 151
151 3300035695 Ga0373927_0136515 Ga0373927_0136515_1082_1588 151
152 3300036401 Ga0373937_0415027 Ga0373937_0415027_26_532 151
153 3300037068 Ga0373925_0466546 Ga0373925_0466546_479_985 151
154 3300046533 Ga0495640_0056784 Ga0495640_0056784_1461_1967 151
155 3300046536 Ga0495587_0129619 Ga0495587_0129619_883_1389 151
156 3300046559 Ga0495667_0136847 Ga0495667_0136847_136_642 151
157 3300046680 Ga0495646_0286801 Ga0495646_0286801_188_694 151
158 3300047322 Ga0495680_0015169 Ga0495680_0015169_3156_3662 151
159 3300047673 Ga0495593_0093634 Ga0495593_0093634_804_1310 151
160 3300049655 Ga0501208_123795 Ga0501208_123795_18_479 151
161 3300053077 Ga0495601_0099790 Ga0495601_0099790_714_1220 151
162 3300053078 Ga0495612_0016388 Ga0495612_0016388_1539_2045 151
163 3300053085 Ga0495619_0000468 Ga0495619_0000468_23693_24199 151
164 3300037068 Ga0373925_0933896 Ga0373925_0933896_30_539 152
165 3300037853 Ga0436364_0129526 Ga0436364_0129526_328_903 152
166 3300039437 Ga0436365_0028650 Ga0436365_0028650_216_791 152
167 3300053730 Ga0500645_067048 Ga0500645_067048_42_554 152
168 3300005347 Ga0070668_100874771 Ga0070668_1008747711 153
169 3300005466 Ga0070685_10641275 Ga0070685_106412751 153
170 3300005618 Ga0068864_100381230 Ga0068864_1003812302 153
171 3300005842 Ga0068858_100349022 Ga0068858_1003490222 153
172 3300014968 Ga0157379_10296677 Ga0157379_102966772 153
173 3300025906 Ga0207699_10249148 Ga0207699_102491482 153
174 3300025928 Ga0207700_10024482 Ga0207700_100244822 153
175 3300026035 Ga0207703_11358418 Ga0207703_113584181 153
176 3300026095 Ga0207676_10491174 Ga0207676_104911741 153
177 3300032126 Ga0307415_100051168 Ga0307415_1000511681 153
178 3300035111 Ga0373923_0084762 Ga0373923_0084762_401_946 153
179 3300035118 Ga0373954_0078033 Ga0373954_0078033_534_1079 153
180 3300035120 Ga0373957_0154344 Ga0373957_0154344_35_580 153
181 3300035170 Ga0373943_0143086 Ga0373943_0143086_207_752 153
182 3300035172 Ga0373955_0006560 Ga0373955_0006560_2709_3254 153
183 3300035692 Ga0373935_0151015 Ga0373935_0151015_43_588 153
184 3300035724 Ga0373933_0013693 Ga0373933_0013693_2138_2683 153
185 3300035725 Ga0373947_0765334 Ga0373947_0765334_31_540 153
186 3300036401 Ga0373937_0014164 Ga0373937_0014164_3048_3593 153
187 3300037068 Ga0373925_0009276 Ga0373925_0009276_4430_4975 153
188 3300046454 Ga0495592_0007532 Ga0495592_0007532_4560_5105 153
189 3300046459 Ga0495629_0427224 Ga0495629_0427224_218_727 153
190 3300046462 Ga0495651_0111040 Ga0495651_0111040_794_1339 153
191 3300046463 Ga0495653_0077483 Ga0495653_0077483_1643_2188 153
192 3300046511 Ga0495608_0235772 Ga0495608_0235772_112_657 153
193 3300046514 Ga0495618_0449367 Ga0495618_0449367_226_771 153
194 3300046516 Ga0495628_0015430 Ga0495628_0015430_2786_3331 153
195 3300046529 Ga0495652_0118461 Ga0495652_0118461_1297_1842 153
196 3300046533 Ga0495640_0072022 Ga0495640_0072022_673_1218 153
197 3300046536 Ga0495587_0015912 Ga0495587_0015912_3336_3881 153
198 3300046543 Ga0495645_0017325 Ga0495645_0017325_1923_2468 153
199 3300046675 Ga0495657_0259917 Ga0495657_0259917_278_823 153
200 3300046678 Ga0495599_0012599 Ga0495599_0012599_2693_3238 153
201 3300046679 Ga0495623_0076115 Ga0495623_0076115_1022_1567 153
202 3300047317 Ga0495604_0015423 Ga0495604_0015423_1630_2175 153
203 3300047322 Ga0495680_0223122 Ga0495680_0223122_365_910 153
204 3300048088 Ga0495602_0011643 Ga0495602_0011643_2675_3220 153
205 3300048903 Ga0496100_0085742 Ga0496100_0085742_882_1388 153
206 3300048906 Ga0496103_0485420 Ga0496103_0485420_160_666 153
207 3300048907 Ga0496104_0047465 Ga0496104_0047465_2887_3393 153
208 3300048908 Ga0496105_0029167 Ga0496105_0029167_238_744 153
209 3300048910 Ga0496107_0155722 Ga0496107_0155722_454_960 153
210 3300048912 Ga0496109_0243156 Ga0496109_0243156_1027_1533 153
211 3300048914 Ga0496111_0202903 Ga0496111_0202903_79_585 153
212 3300048915 Ga0496112_0057203 Ga0496112_0057203_2709_3215 153
213 3300048916 Ga0496113_0196573 Ga0496113_0196573_642_1148 153
214 3300048917 Ga0496114_0461610 Ga0496114_0461610_467_973 153
215 3300048918 Ga0496115_0176025 Ga0496115_0176025_1224_1730 153
216 3300049586 Ga0501070_0986643 Ga0501070_0986643_95_604 153
217 3300053077 Ga0495601_0009486 Ga0495601_0009486_1244_1789 153
218 3300053077 Ga0495601_0557099 Ga0495601_0557099_131_640 153
219 3300053078 Ga0495612_0002844 Ga0495612_0002844_2103_2648 153
220 3300053085 Ga0495619_0007948 Ga0495619_0007948_3257_3802 153
221 3300053153 Ga0500616_0018658 Ga0500616_0018658_155_667 153
222 3300060353 Ga0501082_0145843 Ga0501082_0145843_1168_1680 153
223 3300023438 Ga0256720_105353 Ga0256720_1053531 154
224 3300031852 Ga0307410_10684024 Ga0307410_106840242 154
225 3300031903 Ga0307407_10570803 Ga0307407_105708032 154
226 3300003162 Ga0006778J45830_1050194 Ga0006778J45830_10501941 155
227 3300003308 Ga0006777J48905_1052449 Ga0006777J48905_10524491 155
228 3300003544 Ga0007417J51691_1036045 Ga0007417J51691_10360451 155
229 3300003693 Ga0032354_1042902 Ga0032354_10429021 155
230 3300003735 Ga0006780_1020035 Ga0006780_10200351 155
231 3300004785 Ga0058858_1355378 Ga0058858_13553781 155
232 3300004801 Ga0058860_12025799 Ga0058860_120257992 155
233 3300004801 Ga0058860_12102716 Ga0058860_121027161 155
234 3300004801 Ga0058860_12121498 Ga0058860_121214981 155
235 3300004803 Ga0058862_12597798 Ga0058862_125977981 155
236 3300029283 Ga0310982_145066 Ga0310982_1450661 155
237 3300031852 Ga0307410_11043429 Ga0307410_110434292 155
238 3300031911 Ga0307412_11315985 Ga0307412_113159851 155
239 3300032002 Ga0307416_100357118 Ga0307416_1003571183 155
240 3300049531 Ga0501315_029004 Ga0501315_029004_89_556 155
241 3300049533 Ga0501317_021992 Ga0501317_021992_389_856 155

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01641

SelR

SelR domain

54

172

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hch-assembly1.cif.gz_A structure of the c-terminal domain (msrb) of neisseria meningitidis pilb (complex with substrate) 0.9699 29 152
3cxk-assembly1.cif.gz_A 1.7 a crystal structure of methionine-r-sulfoxide reductase from burkholderia pseudomallei: crystallization in a microfluidic crystal card. 0.964 26 153
3hch-assembly2.cif.gz_B structure of the c-terminal domain (msrb) of neisseria meningitidis pilb (complex with substrate) 0.9606 30 152
6q9v-assembly1.cif.gz_A msrb3 0.9553 25 152
3hcg-assembly1.cif.gz_D structure of the c-terminal domain (msrb) of neisseria meningitidis pilb (reduced form) 0.9523 28 152
ID Description Score Start End Superfamily
af_Q8BU85_97_242_2.170.150.20 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. 0.9701 23 153 2.170.150.20
3cezB00 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. 0.9663 26 153 2.170.150.20
af_Q78J03_33_175_2.170.150.20 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. 0.9655 29 155 2.170.150.20
af_I6YA00_1_135_2.170.150.20 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. 0.961 25 154 2.170.150.20
3cezB00 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. 0.9447 26 153 2.170.150.20
ID Description Score Start End GO Terms
AF-B5ZIW4-F1-model_v4 deleted 0.998 39 152
AF-A0A2V8G1V4-F1-model_v4 peptide-methionine (R)-S-oxide reductase (EC 1.8.4.12) 0.9964 26 154 GO:0005737
GO:0006979
GO:0030091
GO:0033743
AF-A0A0Q4ZDF1-F1-model_v4 peptide-methionine (R)-S-oxide reductase (EC 1.8.4.12) 0.9963 29 154 GO:0005737
GO:0006979
GO:0030091
GO:0033743
AF-A0A7Y8B9J0-F1-model_v4 deleted 0.9956 39 152
AF-D4XCJ1-F1-model_v4 peptide-methionine (R)-S-oxide reductase (EC 1.8.4.12) 0.9949 44 153 GO:0005737
GO:0006979
GO:0030091
GO:0033743

Feature Viewer

pLDDT pTM Quality
87.21 0.79 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map