F353821

General Info

Members Datasets Scaffolds Average Seq Length
241 167 211 330

Family's Representative Sequence

Representative Sequence 3300025299|Ga0209256_1001379|Ga0209256_100137917
Length 375
Sequence MGLADRIGRANASQVAIHPLPRASAPTRAAGRAKVETPFPAGHAMAVPDRFTAFRIHQDEQGHRSGLEPVALDQLDPGQVVVRAEWSSVNYKDALAGTGKGRILRRFPLVGGIDVAGTVVASSDPAWREGDAVLATGCGLSETRDGGYSQYVRLEASAVIARPAALGAREAMIIGTAGFTAALALLRMLDNRLTPAHGPLAVTGATGGVGSLAVDIFSRAGFEVHAISGKPDQAGYLHGLGAQQVLPRDTLATGRPMESARFGGGLDNAGGPMLASLLAQTVPYGSVVSAGLAASPALDMTVMPFIIRGVSLLGVSSSSAPRALREQVWERLGDDWKPRHLDSICTREIGLEGLPEVFEAMLAGDARGRTVVRID

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
3 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
4 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
5 2643221593 Lysobacter sp. Root690 Isolate Unclassified
6 2643221695 Lysobacter sp. Root494 Isolate Unclassified
7 2739367700 Dyella sp. YR388 Isolate Unclassified
8 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
9 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
10 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
11 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
12 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
13 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
14 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
15 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
16 2919085039 Luteibacter sp. 1214 Isolate Unclassified
17 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
18 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
19 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
20 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
21 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
22 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
23 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
24 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
25 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
26 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
27 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
28 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
29 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
30 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
31 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
33 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
34 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
35 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
36 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
37 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
38 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
39 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
40 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
41 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
42 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
43 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
44 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
45 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
46 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
47 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
48 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
49 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
50 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
51 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
52 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
53 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
60 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
75 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
95 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
96 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
101 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
102 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
113 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
114 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
117 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
120 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
130 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
131 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
132 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
133 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
136 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
137 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
156 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
166 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
167 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.55
Metatranscriptomes 0
Isolates 12.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.3
Nodule 0.41
Rhizoplane 4.56
Rhizosphere 63.07
Stem 0
Stem Tuber 0
Unclassified 23.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1494109 2162886007 Bacteria 2779
2 JGI24746J21847_1007979 3300001977 Bacteria 1607
3 JGI24737J22298_10034525 3300001990 Bacteria 1568
4 JGI25406J46586_10003770 3300003203 Bacteria 7084
5 rootH2_10035658 3300003320 Bacteria 6875
6 Ga0055536_1001040 3300003781 Bacteria 17571
7 Ga0055536_1001075 3300003781 Bacteria 17236
8 Ga0055530_10000277 3300003791 Bacteria 46496
9 Ga0055530_10000307 3300003791 Bacteria 44334
10 Ga0055531_10002203 3300003794 Bacteria 13252
11 Ga0055531_10008552 3300003794 Bacteria 5373
12 Ga0055531_10018988 3300003794 Bacteria 2809
13 Ga0065704_10090081 3300005289 Bacteria 2814
14 Ga0065715_10002797 3300005293 Bacteria 4788
15 Ga0065715_10021005 3300005293 Bacteria 2217
16 Ga0065715_10090105 3300005293 Bacteria 7659
17 Ga0070670_100001282 3300005331 Bacteria 20029
18 Ga0070670_100432478 3300005331 Bacteria 1165
19 Ga0070677_10034037 3300005333 Bacteria 1966
20 Ga0070689_100197948 3300005340 Bacteria 1639
21 Ga0070691_10081242 3300005341 Bacteria 1587
22 Ga0070692_10082109 3300005345 Bacteria 1737
23 Ga0070675_100051215 3300005354 Bacteria 3393
24 Ga0070675_100338216 3300005354 Bacteria 1333
25 Ga0070663_100065420 3300005455 Bacteria 2631
26 Ga0070681_10160121 3300005458 Bacteria 2175
27 Ga0070685_10118173 3300005466 Bacteria 1643
28 Ga0070699_100083856 3300005518 Bacteria 2780
29 Ga0070672_100353589 3300005543 Bacteria 1253
30 Ga0070665_100222700 3300005548 Bacteria 1887
31 Ga0068855_100192853 3300005563 Bacteria 2297
32 Ga0070664_100151472 3300005564 Bacteria 2048
33 Ga0068857_100082269 3300005577 Bacteria 2876
34 Ga0068859_100011030 3300005617 Bacteria 9092
35 Ga0068862_100496525 3300005844 Bacteria 1158
36 Ga0075369_10073893 3300006186 Bacteria 1504
37 Ga0075428_100024923 3300006844 Bacteria 6617
38 Ga0068865_100306475 3300006881 Bacteria 1273
39 Ga0097620_100011030 3300006931 Bacteria 9092
40 Ga0105251_10000452 3300009011 Bacteria 39601
41 Ga0105251_10001834 3300009011 Bacteria 17487
42 Ga0105244_10055685 3300009036 Bacteria 2003
43 Ga0105240_10015561 3300009093 Bacteria 10339
44 Ga0105240_10023138 3300009093 Bacteria 8227
45 Ga0105240_10025498 3300009093 Bacteria 7768
46 Ga0105240_10182166 3300009093 Bacteria 2478
47 Ga0111539_10044338 3300009094 Bacteria 5328
48 Ga0111539_10463655 3300009094 Bacteria 1475
49 Ga0105245_10316915 3300009098 Bacteria 1535
50 Ga0105245_10363255 3300009098 Bacteria 1437
51 Ga0114129_10017661 3300009147 Bacteria 10156
52 Ga0114129_10078530 3300009147 Bacteria 4591
53 Ga0114129_10381324 3300009147 Unclassified 1862
54 Ga0114129_10513620 3300009147 Bacteria 1563
55 Ga0105237_10009417 3300009545 Bacteria 10464
56 Ga0105239_10010360 3300010375 Bacteria 10435
57 Ga0157371_10116385 3300013102 Bacteria 1899
58 Ga0157371_10332222 3300013102 Bacteria 1104
59 Ga0157370_10036358 3300013104 Bacteria 4779
60 Ga0157370_10046323 3300013104 Bacteria 4169
61 Ga0157378_10002294 3300013297 Bacteria 17000
62 Ga0157372_10074339 3300013307 Bacteria 3832
63 Ga0157380_10067644 3300014326 Bacteria 2877
64 Ga0157380_10102108 3300014326 Bacteria 2391
65 Ga0182008_10000150 3300014497 Bacteria 54361
66 Ga0157376_10181487 3300014969 Bacteria 1924
67 Ga0182006_1007534 3300015261 Bacteria 4975
68 Ga0182006_1009303 3300015261 Bacteria 4410
69 Ga0182006_1065363 3300015261 Bacteria 1362
70 Ga0182005_1000034 3300015265 Bacteria 180998
71 Ga0163161_10065622 3300017792 Bacteria 2649
72 Ga0209674_100358 3300025226 Bacteria 25855
73 Ga0209676_1000189 3300025292 Bacteria 141166
74 Ga0209676_1000339 3300025292 Bacteria 89252
75 Ga0209676_1000352 3300025292 Bacteria 87022
76 Ga0209050_1000338 3300025298 Bacteria 92924
77 Ga0209050_1000436 3300025298 Bacteria 76328
78 Ga0209256_1001379 3300025299 Bacteria 25429
79 Ga0209051_1001864 3300025303 Bacteria 16550
80 Ga0209257_1000062 3300025304 Bacteria 362413
81 Ga0209257_1000241 3300025304 Bacteria 127802
82 Ga0209257_1005750 3300025304 Bacteria 8479
83 Ga0209257_1009709 3300025304 Bacteria 5065
84 Ga0207713_1000840 3300025735 Bacteria 28232
85 Ga0207671_10010310 3300025914 Bacteria 7724
86 Ga0207650_10005802 3300025925 Bacteria 8427
87 Ga0207670_10055730 3300025936 Bacteria 2673
88 Ga0207691_10222622 3300025940 Bacteria 1636
89 Ga0207679_10178245 3300025945 Bacteria 1756
90 Ga0207667_10137059 3300025949 Bacteria 2520
91 Ga0207668_10119756 3300025972 Bacteria 1991
92 Ga0207708_10068995 3300026075 Bacteria 2706
93 Ga0207683_10187553 3300026121 Bacteria 1877
94 Ga0268266_10091111 3300028379 Bacteria 2673
95 Ga0316176_1101966 3300030732 Bacteria 6761
96 Ga0316181_1027782 3300030744 Bacteria 2321
97 Ga0307413_10288303 3300031824 Bacteria 1238
98 Ga0307412_10088100 3300031911 Bacteria 2164
99 Ga0307414_10018468 3300032004 Bacteria 4295
100 Ga0436365_0559198 3300039437 Bacteria 1881
101 Ga0439449_0000015 3300042007 Bacteria 49208
102 Ga0450911_007526 3300042115 Bacteria 1574
103 Ga0450908_000066 3300042184 Bacteria 20736
104 Ga0466969_0054648 3300044656 Bacteria 1955
105 Ga0466961_0011055 3300044693 Bacteria 5769
106 Ga0466957_0096025 3300044842 Bacteria 1862
107 Ga0466959_0015253 3300045049 Bacteria 5595
108 Ga0495607_0001180 3300046501 Bacteria 23575
109 Ga0495607_0012812 3300046501 Bacteria 5515
110 Ga0495606_0010606 3300046507 Bacteria 7626
111 Ga0495606_0017919 3300046507 Bacteria 5331
112 Ga0495630_0042621 3300046517 Bacteria 3390
113 Ga0495630_0095039 3300046517 Bacteria 2253
114 Ga0495643_0001578 3300046522 Bacteria 20243
115 Ga0495648_0004819 3300046524 Bacteria 11386
116 Ga0495663_0003376 3300046525 Bacteria 4614
117 Ga0495663_0033296 3300046525 Bacteria 1538
118 Ga0495633_0070473 3300046558 Bacteria 1631
119 Ga0495633_0093247 3300046558 Bacteria 1399
120 Ga0495668_0019178 3300046616 Bacteria 3947
121 Ga0495625_0084624 3300046660 Bacteria 2202
122 Ga0495671_0048258 3300046692 Bacteria 2125
123 Ga0495660_0067271 3300046810 Bacteria 1909
124 Ga0495672_0000267 3300047320 Bacteria 72264
125 Ga0495672_0004063 3300047320 Bacteria 12210
126 Ga0495672_0147576 3300047320 Bacteria 1222
127 Ga0495673_0001764 3300047469 Bacteria 16470
128 Ga0495681_0042869 3300047470 Bacteria 2187
129 Ga0496100_0017562 3300048903 Bacteria 4226
130 Ga0496100_0021693 3300048903 Bacteria 3873
131 Ga0496101_0000108 3300048904 Bacteria 86290
132 Ga0496102_0000005 3300048905 Bacteria 481937
133 Ga0496102_0293254 3300048905 Bacteria 1533
134 Ga0496102_0375662 3300048905 Bacteria 1338
135 Ga0496103_0000002 3300048906 Bacteria 605387
136 Ga0496107_0012453 3300048910 Bacteria 5938
137 Ga0496113_0176249 3300048916 Bacteria 1694
138 Ga0496114_0535824 3300048917 Bacteria 1035
139 Ga0496115_0054980 3300048918 Bacteria 3197
140 Ga0496116_0000034 3300048919 Bacteria 409567
141 Ga0496116_0002176 3300048919 Bacteria 20871
142 Ga0496116_0078363 3300048919 Bacteria 2061
143 Ga0496117_0000003 3300048920 Bacteria 1881097
144 Ga0496117_0000843 3300048920 Bacteria 47414
145 Ga0496117_0002530 3300048920 Bacteria 22852
146 Ga0496117_0002737 3300048920 Bacteria 21643
147 Ga0496117_0009093 3300048920 Bacteria 9338
148 Ga0496117_0149676 3300048920 Bacteria 1383
149 Ga0496118_0000001 3300048921 Bacteria 1881100
150 Ga0496118_0000639 3300048921 Bacteria 57425
151 Ga0496118_0002681 3300048921 Bacteria 23521
152 Ga0496118_0012171 3300048921 Bacteria 8297
153 Ga0496118_0128774 3300048921 Bacteria 1630
154 Ga0496118_0152511 3300048921 Bacteria 1444
155 Ga0496119_0001410 3300048922 Bacteria 29099
156 Ga0496119_0019199 3300048922 Bacteria 5047
157 Ga0496120_0000594 3300048923 Bacteria 54781
158 Ga0496120_0001897 3300048923 Bacteria 23186
159 Ga0496121_0003648 3300048924 Bacteria 21655
160 Ga0496121_0007707 3300048924 Bacteria 12921
161 Ga0496121_0011920 3300048924 Bacteria 9569
162 Ga0496122_0001201 3300048925 Bacteria 44175
163 Ga0496122_0024055 3300048925 Bacteria 5342
164 Ga0496122_0050997 3300048925 Bacteria 3149
165 Ga0496122_0051610 3300048925 Bacteria 3123
166 Ga0496122_0113390 3300048925 Bacteria 1771
167 Ga0496123_0000973 3300048926 Bacteria 44187
168 Ga0496123_0027309 3300048926 Bacteria 4253
169 Ga0496123_0081686 3300048926 Bacteria 1962
170 Ga0496124_0000476 3300048927 Bacteria 68995
171 Ga0496124_0001833 3300048927 Bacteria 29350
172 Ga0496124_0053885 3300048927 Bacteria 3407
173 Ga0496124_0123132 3300048927 Bacteria 2069
174 Ga0496124_0204939 3300048927 Bacteria 1496
175 Ga0496125_0057730 3300048928 Bacteria 3140
176 Ga0496126_0000178 3300048929 Bacteria 145079
177 Ga0496126_0154856 3300048929 Bacteria 1962
178 Ga0501031_0285895 3300049568 Bacteria 1069
179 Ga0501032_0159132 3300049569 Bacteria 1483
180 Ga0501033_0151078 3300049570 Bacteria 1676
181 Ga0501034_0229160 3300049571 Bacteria 1807
182 Ga0501036_0087732 3300049572 Bacteria 2629
183 Ga0501036_0109899 3300049572 Bacteria 2329
184 Ga0501038_0288080 3300049574 Bacteria 1291
185 Ga0501039_0018325 3300049575 Bacteria 5373
186 Ga0501040_0048894 3300049576 Bacteria 2891
187 Ga0501040_0129995 3300049576 Bacteria 1770
188 Ga0501040_0202859 3300049576 Bacteria 1408
189 Ga0501041_0034602 3300049577 Bacteria 3059
190 Ga0501042_0024333 3300049578 Bacteria 4247
191 Ga0501046_0049380 3300049580 Bacteria 3328
192 Ga0501047_0317756 3300049581 Bacteria 1397
193 Ga0501048_0034703 3300049582 Bacteria 3637
194 Ga0501048_0090966 3300049582 Bacteria 2152
195 Ga0501071_0005152 3300049587 Bacteria 8374
196 Ga0501071_0082887 3300049587 Bacteria 2349
197 Ga0501075_0051772 3300049591 Bacteria 3088
198 Ga0501076_0009274 3300049592 Bacteria 7259
199 Ga0501076_0067855 3300049592 Bacteria 2848
200 Ga0501079_0260029 3300049741 Bacteria 1357
201 Ga0501080_0356566 3300049742 Bacteria 1320
202 Ga0501081_0107319 3300049743 Bacteria 1980
203 Ga0501045_0006891 3300049824 Bacteria 7877
204 Ga0501045_0039006 3300049824 Bacteria 3456
205 nmdc:mga05p37_3879_c1 3300050507 Bacteria 17482
206 nmdc:mga05p37_544589_c1 3300050507 Bacteria 1322
207 nmdc:mga0qj67_28430_c1 3300050509 Bacteria 4339
208 nmdc:mga08y16_124830_c1 3300050511 Bacteria 2678
209 Ga0501084_0038658 3300054114 Bacteria 3989
210 Ga0501082_0017521 3300060353 Bacteria 6171
211 Ga0501082_0314659 3300060353 Bacteria 1363

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049592 Ga0501076_0067855 Ga0501076_0067855_12_902 282
2 3300009147 Ga0114129_10513620 Ga0114129_105136201 305
3 3300049574 Ga0501038_0288080 Ga0501038_0288080_94_1089 305
4 3300049582 Ga0501048_0090966 Ga0501048_0090966_688_1683 305
5 3300005345 Ga0070692_10082109 Ga0070692_100821092 306
6 3300005844 Ga0068862_100496525 Ga0068862_1004965251 306
7 3300009094 Ga0111539_10463655 Ga0111539_104636551 306
8 3300009098 Ga0105245_10316915 Ga0105245_103169152 306
9 3300014326 Ga0157380_10102108 Ga0157380_101021083 306
10 3300026075 Ga0207708_10068995 Ga0207708_100689952 306
11 3300048905 Ga0496102_0375662 Ga0496102_0375662_86_1081 306
12 3300009147 Ga0114129_10381324 Ga0114129_103813242 307
13 3300049568 Ga0501031_0285895 Ga0501031_0285895_21_950 308
14 3300049741 Ga0501079_0260029 Ga0501079_0260029_23_952 308
15 3300049570 Ga0501033_0151078 Ga0501033_0151078_555_1550 310
16 3300049576 Ga0501040_0048894 Ga0501040_0048894_646_1659 317
17 3300049582 Ga0501048_0034703 Ga0501048_0034703_2020_3033 317
18 3300049587 Ga0501071_0082887 Ga0501071_0082887_627_1640 317
19 3300049742 Ga0501080_0356566 Ga0501080_0356566_118_1131 317
20 3300049824 Ga0501045_0039006 Ga0501045_0039006_563_1576 317
21 3300054114 Ga0501084_0038658 Ga0501084_0038658_1862_2875 317
22 3300060353 Ga0501082_0314659 Ga0501082_0314659_173_1186 317
23 3300013297 Ga0157378_10002294 Ga0157378_1000229420 320
24 3300006844 Ga0075428_100024923 Ga0075428_1000249235 323
25 3300009147 Ga0114129_10017661 Ga0114129_100176614 323
26 3300048917 Ga0496114_0535824 Ga0496114_0535824_43_1023 323
27 3300050507 nmdc:mga05p37_3879_c1 nmdc:mga05p37_3879_c1_674_1681 323
28 3300050509 nmdc:mga0qj67_28430_c1 nmdc:mga0qj67_28430_c1_290_1297 323
29 iso_pu_bacteria 2818991440 2819563772 324
30 iso_pu_bacteria 2904463128 2904463917 324
31 3300048918 Ga0496115_0054980 Ga0496115_0054980_1808_2788 325
32 iso_pu_bacteria 2593339238 2595446563 325
33 iso_pu_bacteria 2902792274 2902799065 325
34 iso_pu_bacteria 2919085039 2919087758 325
35 3300005354 Ga0070675_100051215 Ga0070675_1000512154 326
36 3300009098 Ga0105245_10363255 Ga0105245_103632551 326
37 3300013104 Ga0157370_10036358 Ga0157370_100363587 326
38 3300015265 Ga0182005_1000034 Ga0182005_100003415 326
39 3300046501 Ga0495607_0012812 Ga0495607_0012812_2931_3914 326
40 3300046517 Ga0495630_0095039 Ga0495630_0095039_955_1941 326
41 3300048919 Ga0496116_0078363 Ga0496116_0078363_618_1601 326
42 3300048921 Ga0496118_0152511 Ga0496118_0152511_131_1114 326
43 3300048927 Ga0496124_0053885 Ga0496124_0053885_920_1903 326
44 iso_pu_bacteria 2643221593 2643976635 326
45 iso_pu_bacteria 2643221695 2644529466 326
46 iso_pu_bacteria 2941489479 2941490536 326
47 3300005466 Ga0070685_10118173 Ga0070685_101181731 327
48 3300005617 Ga0068859_100011030 Ga0068859_1000110302 327
49 3300006931 Ga0097620_100011030 Ga0097620_1000110302 327
50 3300025936 Ga0207670_10055730 Ga0207670_100557301 327
51 3300026121 Ga0207683_10187553 Ga0207683_101875531 327
52 3300039437 Ga0436365_0559198 Ga0436365_0559198_607_1593 327
53 iso_pu_bacteria 2547132130 2547503327 327
54 iso_pu_bacteria 2576861471 2578457416 327
55 iso_pu_bacteria 2816332141 2816518885 327
56 iso_pu_bacteria 2842391507 2842393983 327
57 iso_pu_bacteria 2857442823 2857444787 327
58 iso_pu_bacteria 2874220319 2874222763 327
59 iso_pu_bacteria 2919089067 2919093108 327
60 iso_pu_bacteria 2919134579 2919138099 327
61 iso_pu_bacteria 2928496128 2928499859 327
62 iso_pu_bacteria 2931380184 2931383776 327
63 iso_pu_bacteria 2937610967 2937615086 327
64 iso_pu_bacteria 2939622612 2939625820 327
65 iso_pu_bacteria 2939626828 2939629405 327
66 iso_pu_bacteria 2961047084 2961049528 327
67 iso_pu_bacteria 2961064222 2961066849 327
68 3300005331 Ga0070670_100432478 Ga0070670_1004324781 328
69 3300005340 Ga0070689_100197948 Ga0070689_1001979482 328
70 3300005543 Ga0070672_100353589 Ga0070672_1003535892 328
71 3300005564 Ga0070664_100151472 Ga0070664_1001514721 328
72 3300006881 Ga0068865_100306475 Ga0068865_1003064752 328
73 3300009094 Ga0111539_10044338 Ga0111539_100443383 328
74 3300025304 Ga0209257_1009709 Ga0209257_10097096 328
75 3300025940 Ga0207691_10222622 Ga0207691_102226222 328
76 3300025945 Ga0207679_10178245 Ga0207679_101782451 328
77 3300044656 Ga0466969_0054648 Ga0466969_0054648_114_1112 328
78 3300044693 Ga0466961_0011055 Ga0466961_0011055_801_1799 328
79 3300044842 Ga0466957_0096025 Ga0466957_0096025_761_1759 328
80 3300045049 Ga0466959_0015253 Ga0466959_0015253_3638_4636 328
81 3300046517 Ga0495630_0042621 Ga0495630_0042621_2265_3257 328
82 3300049571 Ga0501034_0229160 Ga0501034_0229160_125_1117 328
83 3300050507 nmdc:mga05p37_544589_c1 nmdc:mga05p37_544589_c1_270_1259 328
84 3300050511 nmdc:mga08y16_124830_c1 nmdc:mga08y16_124830_c1_1113_2102 328
85 3300003203 JGI25406J46586_10003770 JGI25406J46586_100037704 329
86 3300003794 Ga0055531_10008552 Ga0055531_100085525 329
87 3300005563 Ga0068855_100192853 Ga0068855_1001928532 329
88 3300009545 Ga0105237_10009417 Ga0105237_100094174 329
89 3300010375 Ga0105239_10010360 Ga0105239_100103607 329
90 3300025226 Ga0209674_100358 Ga0209674_10035817 329
91 3300025914 Ga0207671_10010310 Ga0207671_100103104 329
92 3300025949 Ga0207667_10137059 Ga0207667_101370592 329
93 3300031824 Ga0307413_10288303 Ga0307413_102883032 329
94 3300042184 Ga0450908_000066 Ga0450908_000066_2759_3751 329
95 3300046501 Ga0495607_0001180 Ga0495607_0001180_9287_10279 329
96 3300046507 Ga0495606_0010606 Ga0495606_0010606_5811_6803 329
97 3300046507 Ga0495606_0017919 Ga0495606_0017919_186_1184 329
98 3300046524 Ga0495648_0004819 Ga0495648_0004819_1587_2585 329
99 3300046616 Ga0495668_0019178 Ga0495668_0019178_689_1687 329
100 3300046692 Ga0495671_0048258 Ga0495671_0048258_618_1616 329
101 3300047320 Ga0495672_0004063 Ga0495672_0004063_7107_8105 329
102 3300047469 Ga0495673_0001764 Ga0495673_0001764_4952_5950 329
103 3300048903 Ga0496100_0017562 Ga0496100_0017562_2337_3329 329
104 3300048903 Ga0496100_0021693 Ga0496100_0021693_1693_2691 329
105 3300048904 Ga0496101_0000108 Ga0496101_0000108_50183_51181 329
106 3300048905 Ga0496102_0000005 Ga0496102_0000005_77371_78369 329
107 3300048905 Ga0496102_0293254 Ga0496102_0293254_363_1361 329
108 3300048906 Ga0496103_0000002 Ga0496103_0000002_403599_404597 329
109 3300048910 Ga0496107_0012453 Ga0496107_0012453_3947_4945 329
110 3300048919 Ga0496116_0000034 Ga0496116_0000034_5237_6235 329
111 3300048920 Ga0496117_0000003 Ga0496117_0000003_995735_996733 329
112 3300048921 Ga0496118_0000001 Ga0496118_0000001_995738_996736 329
113 3300048922 Ga0496119_0019199 Ga0496119_0019199_4011_5009 329
114 3300048923 Ga0496120_0000594 Ga0496120_0000594_3607_4605 329
115 3300048924 Ga0496121_0003648 Ga0496121_0003648_5407_6405 329
116 3300048925 Ga0496122_0051610 Ga0496122_0051610_507_1499 329
117 3300048929 Ga0496126_0000178 Ga0496126_0000178_35029_36027 329
118 3300005293 Ga0065715_10002797 Ga0065715_100027975 330
119 3300005293 Ga0065715_10021005 Ga0065715_100210052 330
120 3300005293 Ga0065715_10090105 Ga0065715_100901056 330
121 3300005333 Ga0070677_10034037 Ga0070677_100340372 330
122 3300005354 Ga0070675_100338216 Ga0070675_1003382162 330
123 3300009147 Ga0114129_10078530 Ga0114129_100785301 330
124 3300014326 Ga0157380_10067644 Ga0157380_100676444 330
125 3300014969 Ga0157376_10181487 Ga0157376_101814873 330
126 3300049572 Ga0501036_0109899 Ga0501036_0109899_286_1281 330
127 3300049581 Ga0501047_0317756 Ga0501047_0317756_44_1039 330
128 iso_pu_bacteria 2739367700 2739731652 330
129 iso_pu_bacteria 2852684882 2852689007 330
130 iso_pu_bacteria 2919130084 2919130272 330
131 iso_pu_bacteria 2929195423 2929198733 330
132 iso_pu_bacteria 8021622325 8021622331 330
133 iso_pu_bacteria 8021626552 8021630535 330
134 iso_pu_bacteria 8021648035 8021650892 330
135 3300003320 rootH2_10035658 rootH2_100356585 331
136 3300003781 Ga0055536_1001040 Ga0055536_100104011 331
137 3300003781 Ga0055536_1001075 Ga0055536_100107512 331
138 3300003791 Ga0055530_10000277 Ga0055530_1000027731 331
139 3300003791 Ga0055530_10000307 Ga0055530_1000030727 331
140 3300003794 Ga0055531_10002203 Ga0055531_100022039 331
141 3300003794 Ga0055531_10018988 Ga0055531_100189883 331
142 3300005548 Ga0070665_100222700 Ga0070665_1002227002 331
143 3300006186 Ga0075369_10073893 Ga0075369_100738932 331
144 3300009011 Ga0105251_10001834 Ga0105251_1000183410 331
145 3300009036 Ga0105244_10055685 Ga0105244_100556852 331
146 3300013102 Ga0157371_10116385 Ga0157371_101163851 331
147 3300013102 Ga0157371_10332222 Ga0157371_103322221 331
148 3300013104 Ga0157370_10046323 Ga0157370_100463233 331
149 3300013307 Ga0157372_10074339 Ga0157372_100743392 331
150 3300014497 Ga0182008_10000150 Ga0182008_1000015034 331
151 3300015261 Ga0182006_1007534 Ga0182006_10075342 331
152 3300015261 Ga0182006_1009303 Ga0182006_10093032 331
153 3300017792 Ga0163161_10065622 Ga0163161_100656223 331
154 3300025292 Ga0209676_1000189 Ga0209676_100018913 331
155 3300025292 Ga0209676_1000339 Ga0209676_10003394 331
156 3300025292 Ga0209676_1000352 Ga0209676_100035267 331
157 3300025298 Ga0209050_1000338 Ga0209050_100033868 331
158 3300025298 Ga0209050_1000436 Ga0209050_100043654 331
159 3300025299 Ga0209256_1001379 Ga0209256_100137917 331
160 3300025303 Ga0209051_1001864 Ga0209051_100186411 331
161 3300025304 Ga0209257_1000062 Ga0209257_1000062221 331
162 3300025304 Ga0209257_1000241 Ga0209257_100024196 331
163 3300025304 Ga0209257_1005750 Ga0209257_10057507 331
164 3300025972 Ga0207668_10119756 Ga0207668_101197562 331
165 3300028379 Ga0268266_10091111 Ga0268266_100911112 331
166 3300030732 Ga0316176_1101966 Ga0316176_11019666 331
167 3300030744 Ga0316181_1027782 Ga0316181_10277823 331
168 3300031911 Ga0307412_10088100 Ga0307412_100881002 331
169 3300032004 Ga0307414_10018468 Ga0307414_100184685 331
170 3300042007 Ga0439449_0000015 Ga0439449_0000015_35671_36681 331
171 3300042115 Ga0450911_007526 Ga0450911_007526_231_1226 331
172 3300046522 Ga0495643_0001578 Ga0495643_0001578_16805_17800 331
173 3300046525 Ga0495663_0003376 Ga0495663_0003376_3147_4142 331
174 3300046525 Ga0495663_0033296 Ga0495663_0033296_325_1320 331
175 3300046558 Ga0495633_0070473 Ga0495633_0070473_486_1481 331
176 3300046558 Ga0495633_0093247 Ga0495633_0093247_30_1025 331
177 3300046660 Ga0495625_0084624 Ga0495625_0084624_764_1759 331
178 3300046810 Ga0495660_0067271 Ga0495660_0067271_459_1454 331
179 3300047320 Ga0495672_0000267 Ga0495672_0000267_68667_69662 331
180 3300047470 Ga0495681_0042869 Ga0495681_0042869_923_1918 331
181 3300048916 Ga0496113_0176249 Ga0496113_0176249_246_1241 331
182 3300048919 Ga0496116_0002176 Ga0496116_0002176_1651_2646 331
183 3300048920 Ga0496117_0000843 Ga0496117_0000843_2919_3917 331
184 3300048920 Ga0496117_0002737 Ga0496117_0002737_17479_18474 331
185 3300048920 Ga0496117_0009093 Ga0496117_0009093_8134_9129 331
186 3300048920 Ga0496117_0149676 Ga0496117_0149676_167_1162 331
187 3300048921 Ga0496118_0000639 Ga0496118_0000639_53485_54483 331
188 3300048921 Ga0496118_0002681 Ga0496118_0002681_19339_20334 331
189 3300048921 Ga0496118_0012171 Ga0496118_0012171_6712_7707 331
190 3300048924 Ga0496121_0007707 Ga0496121_0007707_3008_4003 331
191 3300048924 Ga0496121_0011920 Ga0496121_0011920_8116_9111 331
192 3300048925 Ga0496122_0024055 Ga0496122_0024055_4162_5157 331
193 3300048925 Ga0496122_0050997 Ga0496122_0050997_186_1181 331
194 3300048925 Ga0496122_0113390 Ga0496122_0113390_337_1332 331
195 3300048926 Ga0496123_0027309 Ga0496123_0027309_666_1661 331
196 3300048926 Ga0496123_0081686 Ga0496123_0081686_774_1769 331
197 3300048927 Ga0496124_0000476 Ga0496124_0000476_2466_3461 331
198 3300048927 Ga0496124_0123132 Ga0496124_0123132_466_1464 331
199 3300048927 Ga0496124_0204939 Ga0496124_0204939_443_1438 331
200 3300048928 Ga0496125_0057730 Ga0496125_0057730_1368_2363 331
201 3300048929 Ga0496126_0154856 Ga0496126_0154856_156_1151 331
202 3300049569 Ga0501032_0159132 Ga0501032_0159132_176_1192 331
203 3300049572 Ga0501036_0087732 Ga0501036_0087732_1460_2476 331
204 3300049575 Ga0501039_0018325 Ga0501039_0018325_889_1905 331
205 3300049576 Ga0501040_0129995 Ga0501040_0129995_129_1196 331
206 3300049576 Ga0501040_0202859 Ga0501040_0202859_119_1135 331
207 3300049577 Ga0501041_0034602 Ga0501041_0034602_375_1391 331
208 3300049578 Ga0501042_0024333 Ga0501042_0024333_1697_2713 331
209 3300049580 Ga0501046_0049380 Ga0501046_0049380_1033_2049 331
210 3300049587 Ga0501071_0005152 Ga0501071_0005152_1880_2896 331
211 3300049591 Ga0501075_0051772 Ga0501075_0051772_1669_2685 331
212 3300049592 Ga0501076_0009274 Ga0501076_0009274_5825_6841 331
213 3300049743 Ga0501081_0107319 Ga0501081_0107319_37_1053 331
214 3300049824 Ga0501045_0006891 Ga0501045_0006891_5751_6767 331
215 3300060353 Ga0501082_0017521 Ga0501082_0017521_1012_2028 331
216 3300001977 JGI24746J21847_1007979 JGI24746J21847_10079792 332
217 3300001990 JGI24737J22298_10034525 JGI24737J22298_100345252 332
218 3300005341 Ga0070691_10081242 Ga0070691_100812421 332
219 3300009093 Ga0105240_10025498 Ga0105240_100254983 332
220 3300009093 Ga0105240_10182166 Ga0105240_101821662 332
221 3300047320 Ga0495672_0147576 Ga0495672_0147576_108_1121 332
222 3300005458 Ga0070681_10160121 Ga0070681_101601212 333
223 3300005518 Ga0070699_100083856 Ga0070699_1000838562 333
224 2162886007 SwRhRL2b_contig_1494109 SwRhRL2b_0296.00004940 334
225 3300005289 Ga0065704_10090081 Ga0065704_100900812 334
226 3300005331 Ga0070670_100001282 Ga0070670_10000128215 334
227 3300005455 Ga0070663_100065420 Ga0070663_1000654202 334
228 3300005577 Ga0068857_100082269 Ga0068857_1000822693 334
229 3300009011 Ga0105251_10000452 Ga0105251_1000045213 334
230 3300009093 Ga0105240_10015561 Ga0105240_100155616 334
231 3300009093 Ga0105240_10023138 Ga0105240_100231387 334
232 3300015261 Ga0182006_1065363 Ga0182006_10653631 334
233 3300025735 Ga0207713_1000840 Ga0207713_100084016 334
234 3300025925 Ga0207650_10005802 Ga0207650_100058025 334
235 3300048920 Ga0496117_0002530 Ga0496117_0002530_18605_19609 334
236 3300048921 Ga0496118_0128774 Ga0496118_0128774_242_1246 334
237 3300048922 Ga0496119_0001410 Ga0496119_0001410_3003_4007 334
238 3300048923 Ga0496120_0001897 Ga0496120_0001897_18940_19944 334
239 3300048925 Ga0496122_0001201 Ga0496122_0001201_39946_40950 334
240 3300048926 Ga0496123_0000973 Ga0496123_0000973_3238_4242 334
241 3300048927 Ga0496124_0001833 Ga0496124_0001833_25217_26221 334

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

208

334

0.88

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

76

164

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1y9e-assembly1.cif.gz_B crystal structure of bacillus subtilis protein yhfp with nad bound 0.9717 4 330
3nx4-assembly1.cif.gz_B crystal structure of the yhdh oxidoreductase from salmonella enterica in complex with nadp 0.965 8 331
1y9e-assembly1.cif.gz_B crystal structure of bacillus subtilis protein yhfp with nad bound 0.963 4 330
1xa0-assembly1.cif.gz_A crystal structure of mcsg target apc35536 from bacillus stearothermophilus 0.9619 4 331
3nx4-assembly1.cif.gz_B crystal structure of the yhdh oxidoreductase from salmonella enterica in complex with nadp 0.9592 8 331
ID Description Score Start End Superfamily
af_P26646_2_123_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9698 9 128 3.90.180.10
af_P26646_4_324_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9672 11 331 2.40.50.140
af_Q2FVQ0_5_96_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9627 43 131 3.90.180.10
af_P26646_4_324_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9613 11 331 2.40.50.140
5gxfB01 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9611 7 130 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A1B2N7A9-F1-model_v4 deleted 0.9913 1 331
AF-A0A7Z0QSM4-F1-model_v4 Acryloyl-CoA reductase (EC 1.3.1.95) 0.9911 1 330 GO:0043957
GO:0043958
AF-A0A4Q7H5C2-F1-model_v4 deleted 0.9904 7 90
AF-A0A6G7ZVD4-F1-model_v4 YhdH/YhfP family quinone oxidoreductase 0.9903 1 330 GO:0043957
AF-A0A3N5K204-F1-model_v4 Oxidoreductase 0.9884 2 90

Feature Viewer

pLDDT pTM Quality
93.11 0.92 High
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Predicted Structure (AlphaFold2)

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