F353685

General Info

Members Datasets Scaffolds Average Seq Length
241 139 482 334

Family's Representative Sequence

Representative Sequence 3300006852|Ga0075433_10087382|Ga0075433_100873824
Length 368
Sequence VEGAATGVLMRALRNAERDNGTASITKSEEPLGVVLTPIVAKQPLTLEALRGRLLAVDGNGELYQFLALIRLRDGTPLRDSKGRITSHLNGLFYRTTRLIADYGARFVFVFDGTPPPRKAAEIERRRSIRRRYEAERDEALRAGDLATAYSKSTMTSRLTRDMVAEARELLRLLGIPTVQAPSEAEAQAAYMASSAKVWAAASKDYDSLLFGAPRVVRFLTISGKEFLPSKGESRPIEPELLDLDTLLAGWRITRAQLIDLAILVGTDFNDGVKGIGPKKALALVREHGRIERMPPEIQDAVGDVGEVRRIYLDPPVTDDYDLSAGVPDAAGVRKFLCEEREFSAERVGAALDRAFGRGRAEQPTLFG

Samples

Sample ID Description Type Environment
1 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
95 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
98 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
99 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
100 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
101 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
102 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
103 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
104 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
105 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
106 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
107 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
108 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
122 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
123 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
128 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
134 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
135 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
136 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
137 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
138 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.49
Nodule 0
Rhizoplane 0.41
Rhizosphere 97.1
Stem 0
Stem Tuber 0
Unclassified 23.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075433_10087382 3300006852 Bacteria 2753
2 Ga0065715_10152020 3300005293 Unclassified 1718
3 Ga0065707_10086780 3300005295 Bacteria 5290
4 Ga0070676_10056168 3300005328 Bacteria 2325
5 Ga0070690_100050386 3300005330 Bacteria 2657
6 Ga0070670_100048590 3300005331 Bacteria 3651
7 Ga0070670_100083771 3300005331 Unclassified 2739
8 Ga0070666_10050596 3300005335 Bacteria 2795
9 Ga0070680_100319282 3300005336 Bacteria 1318
10 Ga0070691_10002315 3300005341 Bacteria 8442
11 Ga0070668_100080927 3300005347 Unclassified 2545
12 Ga0070669_100065160 3300005353 Bacteria 2684
13 Ga0070669_100126434 3300005353 Bacteria 1956
14 Ga0070669_100175208 3300005353 Unclassified 1674
15 Ga0070675_100001425 3300005354 Bacteria 17561
16 Ga0070675_100163908 3300005354 Bacteria 1913
17 Ga0070671_100323537 3300005355 Unclassified 1314
18 Ga0070674_100006466 3300005356 Bacteria 6838
19 Ga0070688_100240403 3300005365 Bacteria 1285
20 Ga0070667_100040214 3300005367 Bacteria 3921
21 Ga0070703_10041114 3300005406 Bacteria 1440
22 Ga0070701_10004577 3300005438 Bacteria 5624
23 Ga0070705_100003311 3300005440 Bacteria 7911
24 Ga0070700_100033312 3300005441 Bacteria 3102
25 Ga0070700_100205117 3300005441 Archaea 1387
26 Ga0070694_100050752 3300005444 Bacteria 2797
27 Ga0070694_100088262 3300005444 Bacteria 2171
28 Ga0070678_100152502 3300005456 Bacteria 1863
29 Ga0070662_100372501 3300005457 Unclassified 1174
30 Ga0070681_10191698 3300005458 Bacteria 1964
31 Ga0070707_100273000 3300005468 Bacteria 1644
32 Ga0070699_100011483 3300005518 Bacteria 7648
33 Ga0070699_100031201 3300005518 Unclassified 4600
34 Ga0070697_100141216 3300005536 Unclassified 2026
35 Ga0070697_100414544 3300005536 Unclassified 1170
36 Ga0070672_100052070 3300005543 Bacteria 3195
37 Ga0070672_100182081 3300005543 Unclassified 1751
38 Ga0070686_100014773 3300005544 Bacteria 4505
39 Ga0070695_100007370 3300005545 Bacteria 6523
40 Ga0070695_100008304 3300005545 Bacteria 6161
41 Ga0070695_100165324 3300005545 Bacteria 1557
42 Ga0070696_100008747 3300005546 Bacteria 6776
43 Ga0070696_100128236 3300005546 Unclassified 1843
44 Ga0070693_100042017 3300005547 Bacteria 2575
45 Ga0070704_100004654 3300005549 Bacteria 7940
46 Ga0070704_100025957 3300005549 Bacteria 3864
47 Ga0070704_100171603 3300005549 Bacteria 1726
48 Ga0068854_100021137 3300005578 Bacteria 4413
49 Ga0070702_100001609 3300005615 Bacteria 9334
50 Ga0068859_100036257 3300005617 Bacteria 4951
51 Ga0068859_100163336 3300005617 Unclassified 2306
52 Ga0068864_100131846 3300005618 Bacteria 2246
53 Ga0068866_10010432 3300005718 Bacteria 3982
54 Ga0068861_100001283 3300005719 Bacteria 15703
55 Ga0068861_100181854 3300005719 Unclassified 1751
56 Ga0068858_100046150 3300005842 Bacteria 4039
57 Ga0068860_100177099 3300005843 Unclassified 2061
58 Ga0068862_100068995 3300005844 Bacteria 3050
59 Ga0081455_10118903 3300005937 Unclassified 2085
60 Ga0075367_10009191 3300006178 Bacteria 5155
61 Ga0075428_100000008 3300006844 Bacteria 271300
62 Ga0075428_100113672 3300006844 Bacteria 2950
63 Ga0075428_100165915 3300006844 Archaea 2395
64 Ga0075431_100137415 3300006847 Viruses 2520
65 Ga0075431_100150859 3300006847 Unclassified 2393
66 Ga0075434_100005437 3300006871 Bacteria 11599
67 Ga0075434_100010984 3300006871 Bacteria 8517
68 Ga0075434_100013465 3300006871 Bacteria 7787
69 Ga0075434_100029213 3300006871 Bacteria 5421
70 Ga0075434_100049353 3300006871 Bacteria 4179
71 Ga0075434_100068296 3300006871 Bacteria 3541
72 Ga0075434_100447013 3300006871 Bacteria 1314
73 Ga0075434_100493883 3300006871 Bacteria 1245
74 Ga0075429_100044560 3300006880 Bacteria 3858
75 Ga0075436_100000004 3300006914 Bacteria 405358
76 Ga0075436_100002423 3300006914 Bacteria 12858
77 Ga0075436_100004258 3300006914 Bacteria 9821
78 Ga0075436_100031874 3300006914 Bacteria 3631
79 Ga0097620_100036256 3300006931 Bacteria 4951
80 Ga0097620_100163338 3300006931 Unclassified 2306
81 Ga0075435_100000051 3300007076 Bacteria 59038
82 Ga0075435_100001436 3300007076 Bacteria 15312
83 Ga0075435_100014753 3300007076 Bacteria 5856
84 Ga0075435_100038024 3300007076 Unclassified 3836
85 Ga0111539_10000020 3300009094 Bacteria 265282
86 Ga0111539_10020787 3300009094 Bacteria 8080
87 Ga0111539_10023546 3300009094 Bacteria 7566
88 Ga0111539_10033608 3300009094 Bacteria 6226
89 Ga0111539_10080788 3300009094 Bacteria 3824
90 Ga0105245_10092531 3300009098 Bacteria 2785
91 Ga0114129_10012482 3300009147 Bacteria 12096
92 Ga0114129_10018980 3300009147 Bacteria 9795
93 Ga0114129_10029581 3300009147 Bacteria 7757
94 Ga0114129_10029863 3300009147 Bacteria 7720
95 Ga0114129_10051064 3300009147 Bacteria 5806
96 Ga0114129_10076743 3300009147 Bacteria 4651
97 Ga0114129_10083769 3300009147 Bacteria 4428
98 Ga0114129_10150512 3300009147 Bacteria 3185
99 Ga0114129_10193868 3300009147 Unclassified 2757
100 Ga0114129_10289514 3300009147 Bacteria 2186
101 Ga0114129_10405230 3300009147 Bacteria 1797
102 Ga0114129_10436481 3300009147 Bacteria 1720
103 Ga0114129_10459661 3300009147 Unclassified 1668
104 Ga0105243_10001923 3300009148 Bacteria 17711
105 Ga0105242_10249964 3300009176 Bacteria 1597
106 Ga0105249_10136801 3300009553 Bacteria 2345
107 Ga0105249_10544537 3300009553 Unclassified 1210
108 Ga0157374_10508533 3300013296 Unclassified 1210
109 Ga0163162_10104477 3300013306 Bacteria 2927
110 Ga0157375_10022054 3300013308 Bacteria 5856
111 Ga0163163_10229548 3300014325 Unclassified 1905
112 Ga0157380_10162493 3300014326 Bacteria 1943
113 Ga0157379_10040761 3300014968 Bacteria 4145
114 Ga0207642_10045338 3300025899 Bacteria 1951
115 Ga0207645_10002543 3300025907 Bacteria 14271
116 Ga0207684_10131826 3300025910 Unclassified 2145
117 Ga0207684_10275509 3300025910 Archaea 1451
118 Ga0207707_10160451 3300025912 Bacteria 1966
119 Ga0207662_10015612 3300025918 Bacteria 4274
120 Ga0207662_10171875 3300025918 Bacteria 1390
121 Ga0207646_10124729 3300025922 Unclassified 2315
122 Ga0207681_10164938 3300025923 Unclassified 1674
123 Ga0207681_10384382 3300025923 Unclassified 1130
124 Ga0207650_10011321 3300025925 Bacteria 6138
125 Ga0207650_10374100 3300025925 Bacteria 1176
126 Ga0207659_10000728 3300025926 Bacteria 19479
127 Ga0207659_10061346 3300025926 Bacteria 2710
128 Ga0207644_10171490 3300025931 Bacteria 1694
129 Ga0207644_10184198 3300025931 Bacteria 1638
130 Ga0207706_10095139 3300025933 Unclassified 2620
131 Ga0207706_10107276 3300025933 Bacteria 2458
132 Ga0207706_10374613 3300025933 Unclassified 1236
133 Ga0207686_10182536 3300025934 Bacteria 1489
134 Ga0207709_10109798 3300025935 Bacteria 1842
135 Ga0207669_10027763 3300025937 Unclassified 3105
136 Ga0207665_10031349 3300025939 Bacteria 3517
137 Ga0207665_10177362 3300025939 Bacteria 1542
138 Ga0207711_10279504 3300025941 Bacteria 1537
139 Ga0207661_10205202 3300025944 Bacteria 1735
140 Ga0207651_10385192 3300025960 Unclassified 1189
141 Ga0207712_10031889 3300025961 Bacteria 3553
142 Ga0207658_10217162 3300025986 Bacteria 1606
143 Ga0207703_10099139 3300026035 Bacteria 2465
144 Ga0207708_10031764 3300026075 Bacteria 4009
145 Ga0207708_10121631 3300026075 Unclassified 2034
146 Ga0207648_10127073 3300026089 Bacteria 2243
147 Ga0207676_10336233 3300026095 Unclassified 1391
148 Ga0207676_10444431 3300026095 Archaea 1221
149 Ga0207675_100006387 3300026118 Bacteria 11169
150 Ga0207675_100013088 3300026118 Bacteria 7743
151 Ga0207675_100253695 3300026118 Unclassified 1703
152 Ga0207683_10258541 3300026121 Bacteria 1590
153 Ga0207428_10000051 3300027907 Bacteria 176522
154 Ga0207428_10006210 3300027907 Bacteria 11039
155 Ga0207428_10059972 3300027907 Bacteria 3014
156 Ga0207428_10108495 3300027907 Unclassified 2138
157 Ga0268265_10025809 3300028380 Bacteria 4175
158 Ga0268265_10330613 3300028380 Unclassified 1384
159 Ga0268264_10276617 3300028381 Bacteria 1571
160 Ga0307408_100186243 3300031548 Bacteria 1669
161 Ga0307410_10249929 3300031852 Bacteria 1378
162 Ga0307410_10317511 3300031852 Bacteria 1235
163 Ga0307407_10059185 3300031903 Unclassified 2230
164 Ga0307416_100027276 3300032002 Bacteria 4226
165 Ga0307411_10110759 3300032005 Unclassified 1964
166 Ga0307411_10194933 3300032005 Bacteria 1550
167 Ga0373948_0001051 3300034817 Bacteria 3723
168 Ga0373938_0001928 3300034957 Unclassified 3320
169 Ga0373949_0001555 3300035090 Bacteria 6490
170 Ga0373951_0000928 3300035091 Bacteria 7886
171 Ga0373952_0000354 3300035092 Bacteria 7749
172 Ga0373932_0000157 3300035112 Bacteria 19830
173 Ga0373939_0000138 3300035114 Bacteria 20969
174 Ga0373941_0000086 3300035115 Bacteria 15129
175 Ga0373941_0047762 3300035115 Bacteria 1349
176 Ga0373942_0007404 3300035207 Bacteria 2545
177 Ga0373961_0001181 3300035241 Bacteria 8115
178 Ga0373962_0001745 3300035242 Bacteria 5171
179 Ga0373931_0003364 3300035691 Bacteria 7168
180 Ga0439435_0009365 3300042436 Unclassified 2296
181 Ga0466963_0071538 3300044694 Bacteria 2335
182 Ga0451576_0010342 3300045051 Bacteria 10713
183 Ga0466967_0334490 3300045976 Unclassified 1463
184 Ga0496102_0090671 3300048905 Bacteria 2829
185 Ga0501034_0067894 3300049571 Unclassified 3577
186 Ga0501034_0339107 3300049571 Bacteria 1433
187 Ga0501042_0171294 3300049578 Unclassified 1566
188 Ga0501047_0083941 3300049581 Bacteria 3062
189 Ga0501047_0093859 3300049581 Bacteria 2880
190 Ga0501048_0024464 3300049582 Bacteria 4408
191 Ga0501068_0084538 3300049584 Unclassified 1952
192 Ga0501071_0005756 3300049587 Bacteria 7998
193 Ga0501072_0001975 3300049588 Bacteria 15274
194 Ga0501076_0011841 3300049592 Bacteria 6513
195 Ga0501076_0241360 3300049592 Archaea 1478
196 Ga0501081_0038672 3300049743 Bacteria 3261
197 Ga0501044_0002806 3300049823 Bacteria 19858
198 Ga0501045_0130607 3300049824 Archaea 1867
199 nmdc:mga00v17_7757_c1 3300050491 Bacteria 5750
200 nmdc:mga0k408_78405_c1 3300050493 Bacteria 1932
201 nmdc:mga06z11_57652_c1 3300050494 Bacteria 1293
202 nmdc:mga05p37_124177_c1 3300050507 Unclassified 3171
203 nmdc:mga05p37_142535_c1 3300050507 Bacteria 2935
204 nmdc:mga05p37_147388_c1 3300050507 Bacteria 2880
205 nmdc:mga05p37_18391_c1 3300050507 Bacteria 8441
206 nmdc:mga05p37_195756_c1 3300050507 Bacteria 2451
207 nmdc:mga05p37_218063_c1 3300050507 Bacteria 2304
208 nmdc:mga05p37_2828_c1 3300050507 Bacteria 20197
209 nmdc:mga05p37_4_c1 3300050507 Bacteria 162001
210 nmdc:mga05p37_508664_c1 3300050507 Unclassified 1380
211 nmdc:mga05p37_56990_c1 3300050507 Bacteria 4812
212 nmdc:mga09592_85297_c1 3300050508 Bacteria 2694
213 nmdc:mga06r32_178783_c1 3300050510 Unclassified 2107
214 nmdc:mga06r32_264908_c1 3300050510 Archaea 1706
215 nmdc:mga08y16_11388_c1 3300050511 Bacteria 9347
216 nmdc:mga08y16_114245_c1 3300050511 Bacteria 2811
217 nmdc:mga08y16_13267_c1 3300050511 Bacteria 8665
218 nmdc:mga08y16_134671_c1 3300050511 Bacteria 2568
219 nmdc:mga08y16_149143_c1 3300050511 Unclassified 2431
220 nmdc:mga08y16_74957_c1 3300050511 Bacteria 3527
221 nmdc:mga08y16_8_c1 3300050511 Bacteria 571177
222 nmdc:mga0n895_132173_c1 3300050512 Unclassified 2521
223 nmdc:mga0n895_196597_c1 3300050512 Unclassified 2048
224 nmdc:mga0n895_224982_c1 3300050512 Bacteria 1904
225 nmdc:mga0n895_37558_c1 3300050512 Bacteria 4687
226 nmdc:mga0n895_4_c1 3300050512 Bacteria 133851
227 nmdc:mga0rr50_1728_c1 3300050513 Bacteria 12046
228 nmdc:mga0rr50_2451_c1 3300050513 Bacteria 10470
229 nmdc:mga0rr50_4_c1 3300050513 Bacteria 338870
230 nmdc:mga0rr50_83231_c1 3300050513 Unclassified 2473
231 nmdc:mga0rr50_99014_c1 3300050513 Unclassified 2287
232 nmdc:mga08x19_1_c1 3300050514 Bacteria 2010344
233 nmdc:mga08x19_32918_c1 3300050514 Archaea 3270
234 nmdc:mga08x19_3412_c1 3300050514 Bacteria 9477
235 nmdc:mga08x19_60435_c1 3300050514 Unclassified 2455
236 nmdc:mga08x19_626_c1 3300050514 Archaea 22792
237 nmdc:mga0a205_220088_c1 3300050515 Unclassified 1784
238 nmdc:mga0a205_72968_c1 3300050515 Unclassified 3316
239 Ga0500641_0003200 3300053096 Bacteria 5787
240 Ga0500568_0005951 3300053139 Bacteria 6202
241 Ga0501082_0058973 3300060353 Unclassified 3308
242 Ga0075433_10087382
243 Ga0065715_10152020
244 Ga0065707_10086780
245 Ga0070676_10056168
246 Ga0070690_100050386
247 Ga0070670_100048590
248 Ga0070670_100083771
249 Ga0070666_10050596
250 Ga0070680_100319282
251 Ga0070691_10002315
252 Ga0070668_100080927
253 Ga0070669_100065160
254 Ga0070669_100126434
255 Ga0070669_100175208
256 Ga0070675_100001425
257 Ga0070675_100163908
258 Ga0070671_100323537
259 Ga0070674_100006466
260 Ga0070688_100240403
261 Ga0070667_100040214
262 Ga0070703_10041114
263 Ga0070701_10004577
264 Ga0070705_100003311
265 Ga0070700_100033312
266 Ga0070700_100205117
267 Ga0070694_100050752
268 Ga0070694_100088262
269 Ga0070678_100152502
270 Ga0070662_100372501
271 Ga0070681_10191698
272 Ga0070707_100273000
273 Ga0070699_100011483
274 Ga0070699_100031201
275 Ga0070697_100141216
276 Ga0070697_100414544
277 Ga0070672_100052070
278 Ga0070672_100182081
279 Ga0070686_100014773
280 Ga0070695_100007370
281 Ga0070695_100008304
282 Ga0070695_100165324
283 Ga0070696_100008747
284 Ga0070696_100128236
285 Ga0070693_100042017
286 Ga0070704_100004654
287 Ga0070704_100025957
288 Ga0070704_100171603
289 Ga0068854_100021137
290 Ga0070702_100001609
291 Ga0068859_100036257
292 Ga0068859_100163336
293 Ga0068864_100131846
294 Ga0068866_10010432
295 Ga0068861_100001283
296 Ga0068861_100181854
297 Ga0068858_100046150
298 Ga0068860_100177099
299 Ga0068862_100068995
300 Ga0081455_10118903
301 Ga0075367_10009191
302 Ga0075428_100000008
303 Ga0075428_100113672
304 Ga0075428_100165915
305 Ga0075431_100137415
306 Ga0075431_100150859
307 Ga0075434_100005437
308 Ga0075434_100010984
309 Ga0075434_100013465
310 Ga0075434_100029213
311 Ga0075434_100049353
312 Ga0075434_100068296
313 Ga0075434_100447013
314 Ga0075434_100493883
315 Ga0075429_100044560
316 Ga0075436_100000004
317 Ga0075436_100002423
318 Ga0075436_100004258
319 Ga0075436_100031874
320 Ga0097620_100036256
321 Ga0097620_100163338
322 Ga0075435_100000051
323 Ga0075435_100001436
324 Ga0075435_100014753
325 Ga0075435_100038024
326 Ga0111539_10000020
327 Ga0111539_10020787
328 Ga0111539_10023546
329 Ga0111539_10033608
330 Ga0111539_10080788
331 Ga0105245_10092531
332 Ga0114129_10012482
333 Ga0114129_10018980
334 Ga0114129_10029581
335 Ga0114129_10029863
336 Ga0114129_10051064
337 Ga0114129_10076743
338 Ga0114129_10083769
339 Ga0114129_10150512
340 Ga0114129_10193868
341 Ga0114129_10289514
342 Ga0114129_10405230
343 Ga0114129_10436481
344 Ga0114129_10459661
345 Ga0105243_10001923
346 Ga0105242_10249964
347 Ga0105249_10136801
348 Ga0105249_10544537
349 Ga0157374_10508533
350 Ga0163162_10104477
351 Ga0157375_10022054
352 Ga0163163_10229548
353 Ga0157380_10162493
354 Ga0157379_10040761
355 Ga0207642_10045338
356 Ga0207645_10002543
357 Ga0207684_10131826
358 Ga0207684_10275509
359 Ga0207707_10160451
360 Ga0207662_10015612
361 Ga0207662_10171875
362 Ga0207646_10124729
363 Ga0207681_10164938
364 Ga0207681_10384382
365 Ga0207650_10011321
366 Ga0207650_10374100
367 Ga0207659_10000728
368 Ga0207659_10061346
369 Ga0207644_10171490
370 Ga0207644_10184198
371 Ga0207706_10095139
372 Ga0207706_10107276
373 Ga0207706_10374613
374 Ga0207686_10182536
375 Ga0207709_10109798
376 Ga0207669_10027763
377 Ga0207665_10031349
378 Ga0207665_10177362
379 Ga0207711_10279504
380 Ga0207661_10205202
381 Ga0207651_10385192
382 Ga0207712_10031889
383 Ga0207658_10217162
384 Ga0207703_10099139
385 Ga0207708_10031764
386 Ga0207708_10121631
387 Ga0207648_10127073
388 Ga0207676_10336233
389 Ga0207676_10444431
390 Ga0207675_100006387
391 Ga0207675_100013088
392 Ga0207675_100253695
393 Ga0207683_10258541
394 Ga0207428_10000051
395 Ga0207428_10006210
396 Ga0207428_10059972
397 Ga0207428_10108495
398 Ga0268265_10025809
399 Ga0268265_10330613
400 Ga0268264_10276617
401 Ga0307408_100186243
402 Ga0307410_10249929
403 Ga0307410_10317511
404 Ga0307407_10059185
405 Ga0307416_100027276
406 Ga0307411_10110759
407 Ga0307411_10194933
408 Ga0373948_0001051
409 Ga0373938_0001928
410 Ga0373949_0001555
411 Ga0373951_0000928
412 Ga0373952_0000354
413 Ga0373932_0000157
414 Ga0373939_0000138
415 Ga0373941_0000086
416 Ga0373941_0047762
417 Ga0373942_0007404
418 Ga0373961_0001181
419 Ga0373962_0001745
420 Ga0373931_0003364
421 Ga0439435_0009365
422 Ga0466963_0071538
423 Ga0451576_0010342
424 Ga0466967_0334490
425 Ga0496102_0090671
426 Ga0501034_0067894
427 Ga0501034_0339107
428 Ga0501042_0171294
429 Ga0501047_0083941
430 Ga0501047_0093859
431 Ga0501048_0024464
432 Ga0501068_0084538
433 Ga0501071_0005756
434 Ga0501072_0001975
435 Ga0501076_0011841
436 Ga0501076_0241360
437 Ga0501081_0038672
438 Ga0501044_0002806
439 Ga0501045_0130607
440 nmdc:mga00v17_7757_c1
441 nmdc:mga0k408_78405_c1
442 nmdc:mga06z11_57652_c1
443 nmdc:mga05p37_124177_c1
444 nmdc:mga05p37_142535_c1
445 nmdc:mga05p37_147388_c1
446 nmdc:mga05p37_18391_c1
447 nmdc:mga05p37_195756_c1
448 nmdc:mga05p37_218063_c1
449 nmdc:mga05p37_2828_c1
450 nmdc:mga05p37_4_c1
451 nmdc:mga05p37_508664_c1
452 nmdc:mga05p37_56990_c1
453 nmdc:mga09592_85297_c1
454 nmdc:mga06r32_178783_c1
455 nmdc:mga06r32_264908_c1
456 nmdc:mga08y16_11388_c1
457 nmdc:mga08y16_114245_c1
458 nmdc:mga08y16_13267_c1
459 nmdc:mga08y16_134671_c1
460 nmdc:mga08y16_149143_c1
461 nmdc:mga08y16_74957_c1
462 nmdc:mga08y16_8_c1
463 nmdc:mga0n895_132173_c1
464 nmdc:mga0n895_196597_c1
465 nmdc:mga0n895_224982_c1
466 nmdc:mga0n895_37558_c1
467 nmdc:mga0n895_4_c1
468 nmdc:mga0rr50_1728_c1
469 nmdc:mga0rr50_2451_c1
470 nmdc:mga0rr50_4_c1
471 nmdc:mga0rr50_83231_c1
472 nmdc:mga0rr50_99014_c1
473 nmdc:mga08x19_1_c1
474 nmdc:mga08x19_32918_c1
475 nmdc:mga08x19_3412_c1
476 nmdc:mga08x19_60435_c1
477 nmdc:mga08x19_626_c1
478 nmdc:mga0a205_220088_c1
479 nmdc:mga0a205_72968_c1
480 Ga0500641_0003200
481 Ga0500568_0005951
482 Ga0501082_0058973

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00867

XPG_I

XPG I-region

175

268

0.92

PF00752

XPG_N

XPG N-terminal domain

31

133

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1rxv-assembly2.cif.gz_B crystal structure of a. fulgidus fen-1 bound to dna 0.9576 4 328
1rxw-assembly1.cif.gz_A crystal structure of a. fulgidus fen-1 bound to dna 0.9551 5 328
1rxv-assembly2.cif.gz_B crystal structure of a. fulgidus fen-1 bound to dna 0.9515 4 328
2izo-assembly1.cif.gz_A structure of an archaeal pcna1-pcna2-fen1 complex 0.95 10 328
1rxw-assembly1.cif.gz_A crystal structure of a. fulgidus fen-1 bound to dna 0.9399 5 328
ID Description Score Start End Superfamily
af_P39750_1_221_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9075 11 224 3.40.50.1010
3oryA02 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.8475 223 285 1.10.150.20
1rxvB02 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.8415 223 285 1.10.150.20
af_Q12086_212_283_1.10.150.20 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.836 223 287 1.10.150.20
1rxwA02 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.8343 223 270 1.10.150.20
ID Description Score Start End GO Terms
AF-A0A7J2M136-F1-model_v4 Flap structure-specific endonuclease 0.9857 1 182 GO:0006281
GO:0017108
AF-A0A2V8M0A2-F1-model_v4 Flap endonuclease-1 0.9818 1 329 GO:0003677
GO:0006260
GO:0006281
GO:0008409
GO:0017108
GO:0046872
AF-A0A7C2L8T6-F1-model_v4 Flap endonuclease 1 (FEN-1) (EC 3.1.-.-) (Flap structure-specific endonuclease 1) 0.9808 1 328 GO:0000287
GO:0003677
GO:0006281
GO:0008409
GO:0017108
GO:0043137
AF-A0A2V8HCX1-F1-model_v4 Flap structure-specific endonuclease 0.9802 1 127 GO:0017108
AF-A0A662H6V5-F1-model_v4 Flap structure-specific endonuclease 0.9785 1 161 GO:0017108

Map