F353258

General Info

Members Datasets Scaffolds Average Seq Length
240 135 234 647

Family's Representative Sequence

Representative Sequence 3300049573|Ga0501037_0029749|Ga0501037_0029749_1500_3677
Length 684
Sequence MSTIPPLAVEPTPPHSAKLEAIWRTEPGLIGWLSSVDHKEIGKRYLVTAFLFLVAGGLEALYMRVQLARPNQEIVTPEQYNQLFSMHGMTMIFLYAMPSYWMYVAAGLFMYAGFAIGAGANDGWFNYVPYAEKDFNPGLNMDFYALGMIFLGVSTTVGAINFVVTFLRMRAPGMSIEKVPIMTWGTLTASAANILVIPAVSLAFFLLWLDRQFGTHFYDVHAGGHPLLWQHLFWMFGHPWVYAIVLPAIGMTSEGLQTLCRRPLVAFEAVALATVATMVLGFGVWVHHMFATGLPALALSFFSGASIIITIPSAVAIFAWIATIWTGRPAYTVAFHYFAAVIVLFVIGGVSGVMTASVPVDWQLTDTYFVVAHLHYVLIGINVFAVVGGVYHWFPKFTGRLLDERLGRWNFWTMFIGFNLAFLPMHLTGLLGMPRRVYTYPADFGWDALNLITSVGAFVLAIGVLMFVVAVVRALRAGAPAGPNPWGAPTLDWSMSSPPPAYNFLEIPIVRSRYPLWEPAELAPASRSALRTDLKLEHGRETLATSALDAETDLVMKMPEDTIAPFVLTLGMALGFVGMLLHGRWLTFLLGLAFFIVQLFEWKAKPFTPQSGSFGSLYFTITGFHMAHVGAGLIALLLIFFWCLSGYLDERRHVPMLIGAAYWHFVDVVWLTVFFTFYLLPRFW

Samples

Sample ID Description Type Environment
1 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
2 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
3 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
4 2856334872 Mesorhizobium sp. M7A.F.Ca.US.005.03.1.1 Isolate Nodule
5 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
9 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
10 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
51 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
53 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
82 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
85 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
86 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
87 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
88 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
95 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
96 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
100 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
101 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
102 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
103 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
104 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
111 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
112 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
124 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
130 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
131 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
132 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
133 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
134 8002060224 Methylocystis sp. Sn-Cys Isolate Unclassified
135 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.5
Metatranscriptomes 0
Isolates 2.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.42
Nodule 0.42
Rhizoplane 3.33
Rhizosphere 85.42
Stem 0
Stem Tuber 0
Unclassified 5.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000122 3300001979 Bacteria 28965
2 JGI24735J21928_10002731 3300002067 Bacteria 6088
3 JGI25153J46596_10000293 3300003215 Bacteria 37385
4 Ga0055525_1000274 3300003759 Bacteria 48089
5 Ga0055542_1000060 3300003762 Bacteria 162275
6 Ga0055529_1000043 3300003763 Bacteria 221704
7 Ga0070658_10006318 3300005327 Bacteria 9600
8 Ga0070683_100010572 3300005329 Bacteria 7935
9 Ga0070660_100003629 3300005339 Bacteria 10664
10 Ga0070660_100004038 3300005339 Bacteria 10136
11 Ga0070660_100014917 3300005339 Bacteria 5606
12 Ga0070661_100000160 3300005344 Bacteria 55287
13 Ga0070661_100000723 3300005344 Bacteria 24131
14 Ga0070661_100001796 3300005344 Bacteria 14885
15 Ga0070659_100035755 3300005366 Bacteria 3869
16 Ga0070714_100001511 3300005435 Bacteria 16940
17 Ga0070714_100005303 3300005435 Bacteria 9824
18 Ga0070713_100005559 3300005436 Bacteria 8636
19 Ga0070713_100007965 3300005436 Bacteria 7486
20 Ga0070663_100000150 3300005455 Bacteria 34285
21 Ga0070663_100031871 3300005455 Bacteria 3627
22 Ga0070679_100010101 3300005530 Bacteria 8946
23 Ga0068853_100002362 3300005539 Bacteria 14116
24 Ga0068853_100018574 3300005539 Bacteria 5756
25 Ga0068853_100028904 3300005539 Bacteria 4667
26 Ga0068853_100048288 3300005539 Bacteria 3656
27 Ga0070672_100040369 3300005543 Bacteria 3580
28 Ga0070665_100000752 3300005548 Bacteria 43043
29 Ga0070665_100028692 3300005548 Bacteria 5603
30 Ga0068855_100003875 3300005563 Bacteria 18283
31 Ga0068855_100030963 3300005563 Bacteria 6394
32 Ga0068855_100038901 3300005563 Bacteria 5648
33 Ga0068855_100075497 3300005563 Bacteria 3914
34 Ga0068855_100117494 3300005563 Bacteria 3047
35 Ga0068857_100041689 3300005577 Bacteria 4070
36 Ga0068857_100061367 3300005577 Bacteria 3340
37 Ga0068857_100063322 3300005577 Bacteria 3287
38 Ga0068854_100001799 3300005578 Bacteria 13051
39 Ga0068854_100016288 3300005578 Bacteria 4952
40 Ga0068856_100000173 3300005614 Bacteria 67420
41 Ga0068856_100003874 3300005614 Bacteria 15018
42 Ga0068856_100023361 3300005614 Bacteria 6011
43 Ga0068856_100039484 3300005614 Bacteria 4635
44 Ga0068852_100001281 3300005616 Bacteria 16777
45 Ga0068852_100002713 3300005616 Bacteria 12235
46 Ga0068852_100019785 3300005616 Bacteria 5338
47 Ga0068852_100032001 3300005616 Bacteria 4350
48 Ga0068852_100110087 3300005616 Bacteria 2502
49 Ga0068864_100033233 3300005618 Bacteria 4385
50 Ga0068851_10001677 3300005834 Bacteria 9693
51 Ga0068858_100000823 3300005842 Bacteria 32364
52 Ga0081539_10000577 3300005985 Bacteria 75437
53 Ga0097621_100044505 3300006237 Bacteria 3581
54 Ga0068871_100030522 3300006358 Bacteria 4245
55 Ga0105240_10004020 3300009093 Bacteria 22640
56 Ga0105240_10005715 3300009093 Bacteria 18452
57 Ga0105240_10045912 3300009093 Bacteria 5539
58 Ga0105240_10056883 3300009093 Bacteria 4891
59 Ga0105240_10108644 3300009093 Bacteria 3360
60 Ga0105240_10123486 3300009093 Bacteria 3115
61 Ga0105241_10000163 3300009174 Bacteria 48553
62 Ga0105242_10046252 3300009176 Bacteria 3530
63 Ga0105237_10023989 3300009545 Bacteria 6241
64 Ga0105238_10001681 3300009551 Bacteria 22238
65 Ga0105238_10001812 3300009551 Bacteria 21416
66 Ga0105238_10002290 3300009551 Bacteria 19296
67 Ga0105238_10016944 3300009551 Bacteria 7394
68 Ga0105238_10039200 3300009551 Bacteria 4805
69 Ga0105238_10087425 3300009551 Bacteria 3104
70 Ga0105239_10002243 3300010375 Bacteria 24699
71 Ga0105239_10004382 3300010375 Bacteria 16905
72 Ga0105239_10027521 3300010375 Bacteria 6257
73 Ga0105239_10045989 3300010375 Bacteria 4783
74 Ga0157373_10000413 3300013100 Bacteria 34379
75 Ga0157373_10047209 3300013100 Bacteria 3072
76 Ga0157371_10006632 3300013102 Bacteria 9492
77 Ga0157370_10002058 3300013104 Bacteria 24658
78 Ga0157370_10008726 3300013104 Bacteria 10905
79 Ga0157370_10030150 3300013104 Bacteria 5317
80 Ga0157369_10000141 3300013105 Bacteria 102055
81 Ga0157369_10004026 3300013105 Bacteria 17420
82 Ga0157369_10006333 3300013105 Bacteria 13739
83 Ga0157372_10040497 3300013307 Bacteria 5147
84 Ga0213876_10041929 3300021384 Bacteria 2418
85 Ga0213875_10001180 3300021388 Bacteria 17911
86 Ga0209563_100106 3300025230 Bacteria 146256
87 Ga0207427_100574 3300025231 Bacteria 18543
88 Ga0209148_1000017 3300025254 Bacteria 787064
89 Ga0209233_1000278 3300025261 Bacteria 71989
90 Ga0209233_1000623 3300025261 Bacteria 17869
91 Ga0209455_1000005 3300025272 Bacteria 1416756
92 Ga0209758_1000013 3300025297 Bacteria 873003
93 Ga0207656_10024295 3300025321 Bacteria 2449
94 Ga0207680_10005133 3300025903 Bacteria 6245
95 Ga0207647_10014945 3300025904 Bacteria 5335
96 Ga0207705_10000003 3300025909 Bacteria 709270
97 Ga0207705_10000979 3300025909 Bacteria 23328
98 Ga0207705_10001147 3300025909 Bacteria 21571
99 Ga0207705_10028998 3300025909 Bacteria 3947
100 Ga0207705_10069170 3300025909 Bacteria 2557
101 Ga0207654_10000020 3300025911 Bacteria 167053
102 Ga0207695_10001859 3300025913 Bacteria 33075
103 Ga0207695_10012256 3300025913 Bacteria 10298
104 Ga0207695_10018490 3300025913 Bacteria 8056
105 Ga0207695_10096310 3300025913 Bacteria 2961
106 Ga0207671_10003755 3300025914 Bacteria 14950
107 Ga0207671_10019153 3300025914 Bacteria 5239
108 Ga0207657_10003172 3300025919 Bacteria 17595
109 Ga0207657_10004038 3300025919 Bacteria 15586
110 Ga0207657_10016203 3300025919 Bacteria 7194
111 Ga0207657_10044219 3300025919 Bacteria 3917
112 Ga0207649_10000029 3300025920 Bacteria 156557
113 Ga0207649_10000285 3300025920 Bacteria 39556
114 Ga0207649_10012053 3300025920 Bacteria 4784
115 Ga0207652_10012023 3300025921 Bacteria 6986
116 Ga0207694_10000453 3300025924 Bacteria 38088
117 Ga0207694_10001223 3300025924 Bacteria 22242
118 Ga0207700_10046499 3300025928 Bacteria 3210
119 Ga0207664_10003321 3300025929 Bacteria 10698
120 Ga0207644_10003540 3300025931 Bacteria 10111
121 Ga0207690_10044809 3300025932 Bacteria 2918
122 Ga0207690_10083658 3300025932 Bacteria 2235
123 Ga0207706_10043249 3300025933 Bacteria 3993
124 Ga0207711_10014035 3300025941 Bacteria 6656
125 Ga0207667_10002205 3300025949 Bacteria 24444
126 Ga0207667_10004903 3300025949 Bacteria 16345
127 Ga0207667_10007298 3300025949 Bacteria 13320
128 Ga0207667_10034323 3300025949 Bacteria 5449
129 Ga0207640_10000260 3300025981 Bacteria 35737
130 Ga0207640_10000994 3300025981 Bacteria 15695
131 Ga0207640_10007035 3300025981 Bacteria 6194
132 Ga0207703_10000832 3300026035 Bacteria 30345
133 Ga0207639_10011068 3300026041 Bacteria 6256
134 Ga0207639_10021173 3300026041 Bacteria 4667
135 Ga0207639_10041845 3300026041 Bacteria 3431
136 Ga0207639_10045543 3300026041 Bacteria 3305
137 Ga0207678_10002461 3300026067 Bacteria 16819
138 Ga0207678_10004617 3300026067 Bacteria 12376
139 Ga0207678_10005397 3300026067 Bacteria 11453
140 Ga0207678_10010795 3300026067 Bacteria 8024
141 Ga0207678_10048810 3300026067 Bacteria 3658
142 Ga0207702_10000214 3300026078 Bacteria 68145
143 Ga0207702_10021916 3300026078 Bacteria 5291
144 Ga0207702_10062707 3300026078 Bacteria 3176
145 Ga0207674_10014303 3300026116 Bacteria 8770
146 Ga0207674_10122263 3300026116 Bacteria 2569
147 Ga0207674_10174342 3300026116 Bacteria 2103
148 Ga0207698_10005585 3300026142 Bacteria 7781
149 Ga0207698_10010395 3300026142 Bacteria 5976
150 Ga0207698_10015586 3300026142 Bacteria 5095
151 Ga0268266_10000744 3300028379 Bacteria 43632
152 Ga0268266_10000957 3300028379 Bacteria 36762
153 Ga0268266_10066196 3300028379 Bacteria 3124
154 Ga0265318_10000143 3300028577 Bacteria 64628
155 Ga0265338_10004645 3300028800 Bacteria 18450
156 Ga0265330_10008507 3300031235 Bacteria 4935
157 Ga0265325_10001446 3300031241 Bacteria 16691
158 Ga0265331_10000002 3300031250 Bacteria 511481
159 Ga0265331_10000763 3300031250 Bacteria 26867
160 Ga0265327_10000153 3300031251 Bacteria 149004
161 Ga0265327_10006349 3300031251 Bacteria 9485
162 Ga0265316_10014131 3300031344 Bacteria 7044
163 Ga0265313_10000309 3300031595 Bacteria 53027
164 Ga0265313_10003254 3300031595 Bacteria 13347
165 Ga0265314_10007292 3300031711 Bacteria 9605
166 Ga0265314_10034658 3300031711 Bacteria 3686
167 Ga0265314_10041935 3300031711 Bacteria 3270
168 Ga0395899_0015173 3300037312 Bacteria 5875
169 Ga0395899_0016734 3300037312 Bacteria 5590
170 Ga0395899_0060627 3300037312 Bacteria 2787
171 Ga0395900_0015191 3300037418 Bacteria 7852
172 Ga0395900_0040555 3300037418 Bacteria 4798
173 Ga0395898_0008469 3300037466 Bacteria 10867
174 Ga0395898_0045852 3300037466 Bacteria 4295
175 Ga0436364_0892255 3300037853 Bacteria 46954
176 Ga0395901_0000624 3300038443 Bacteria 41075
177 Ga0395901_0181880 3300038443 Bacteria 2205
178 Ga0436365_0820294 3300039437 Bacteria 4075
179 Ga0436365_1016920 3300039437 Bacteria 7653
180 Ga0436363_0622573 3300039450 Bacteria 3963
181 Ga0466969_0007505 3300044656 Bacteria 5798
182 Ga0466966_0000333 3300044684 Bacteria 30532
183 Ga0466966_0008508 3300044684 Bacteria 6793
184 Ga0466957_0002448 3300044842 Bacteria 9966
185 Ga0466959_0008361 3300045049 Bacteria 7313
186 Ga0466959_0021873 3300045049 Bacteria 4723
187 Ga0495585_0000598 3300046492 Bacteria 33790
188 Ga0495606_0000215 3300046507 Bacteria 102974
189 Ga0495677_0001129 3300047445 Bacteria 10657
190 Ga0495686_0000124 3300047472 Bacteria 159708
191 Ga0495686_0004739 3300047472 Bacteria 11014
192 Ga0496100_0004809 3300048903 Bacteria 7214
193 Ga0496100_0014189 3300048903 Bacteria 4619
194 Ga0496101_0005056 3300048904 Bacteria 8385
195 Ga0496106_0006471 3300048909 Bacteria 8675
196 Ga0496107_0000243 3300048910 Bacteria 28621
197 Ga0496109_0016457 3300048912 Bacteria 6466
198 Ga0496114_0033347 3300048917 Bacteria 4242
199 Ga0496115_0070631 3300048918 Bacteria 2831
200 Ga0496118_0000704 3300048921 Bacteria 54169
201 Ga0496121_0047757 3300048924 Bacteria 3649
202 Ga0496126_0007321 3300048929 Bacteria 12122
203 Ga0501033_0027116 3300049570 Bacteria 4309
204 Ga0501034_0005474 3300049571 Bacteria 13863
205 Ga0501034_0017206 3300049571 Bacteria 7416
206 Ga0501034_0024352 3300049571 Bacteria 6156
207 Ga0501036_0012392 3300049572 Bacteria 7063
208 Ga0501037_0018374 3300049573 Bacteria 5153
209 Ga0501037_0029749 3300049573 Bacteria 4035
210 Ga0501038_0032492 3300049574 Bacteria 4603
211 Ga0501040_0008919 3300049576 Bacteria 6523
212 Ga0501043_0004365 3300049579 Bacteria 11507
213 Ga0501046_0003183 3300049580 Bacteria 15144
214 Ga0501046_0004359 3300049580 Bacteria 12881
215 Ga0501046_0007946 3300049580 Bacteria 9281
216 Ga0501046_0012789 3300049580 Bacteria 7139
217 Ga0501047_0004926 3300049581 Bacteria 12542
218 Ga0501047_0037690 3300049581 Bacteria 4675
219 Ga0501048_0006641 3300049582 Bacteria 8793
220 Ga0501067_0005097 3300049583 Bacteria 7296
221 Ga0501073_0022418 3300049589 Bacteria 4547
222 Ga0501074_0007754 3300049590 Bacteria 7772
223 Ga0501079_0008178 3300049741 Bacteria 7928
224 Ga0501079_0008848 3300049741 Bacteria 7624
225 Ga0501080_0056822 3300049742 Bacteria 3643
226 Ga0501080_0114602 3300049742 Bacteria 2499
227 Ga0501035_0018972 3300049822 Bacteria 6332
228 Ga0501035_0034251 3300049822 Bacteria 4615
229 Ga0501044_0027197 3300049823 Bacteria 6047
230 Ga0500595_000706 3300053119 Bacteria 19925
231 Ga0500588_0000324 3300053146 Bacteria 7182
232 Ga0501084_0000033 3300054114 Bacteria 114778
233 Ga0501082_0000841 3300060353 Bacteria 27049
234 Ga0501082_0027978 3300060353 Bacteria 4856

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049570 Ga0501033_0027116 Ga0501033_0027116_298_2226 586
2 3300049571 Ga0501034_0024352 Ga0501034_0024352_637_2565 586
3 3300049576 Ga0501040_0008919 Ga0501040_0008919_1906_3834 586
4 3300049580 Ga0501046_0012789 Ga0501046_0012789_2879_4807 586
5 3300049581 Ga0501047_0037690 Ga0501047_0037690_231_2159 586
6 3300049583 Ga0501067_0005097 Ga0501067_0005097_1031_2959 586
7 3300049590 Ga0501074_0007754 Ga0501074_0007754_1117_3045 586
8 3300049741 Ga0501079_0008178 Ga0501079_0008178_1604_3532 586
9 3300049822 Ga0501035_0018972 Ga0501035_0018972_3768_5696 586
10 3300049823 Ga0501044_0027197 Ga0501044_0027197_3205_5133 586
11 3300060353 Ga0501082_0027978 Ga0501082_0027978_518_2446 586
12 3300005329 Ga0070683_100010572 Ga0070683_1000105725 592
13 3300048903 Ga0496100_0004809 Ga0496100_0004809_2529_4424 594
14 3300048904 Ga0496101_0005056 Ga0496101_0005056_6328_8223 594
15 3300048909 Ga0496106_0006471 Ga0496106_0006471_2289_4184 594
16 3300048910 Ga0496107_0000243 Ga0496107_0000243_8922_10817 594
17 3300013105 Ga0157369_10006333 Ga0157369_100063339 598
18 3300009551 Ga0105238_10001681 Ga0105238_1000168120 600
19 3300025924 Ga0207694_10001223 Ga0207694_100012234 600
20 3300049573 Ga0501037_0029749 Ga0501037_0029749_1500_3677 603
21 3300005436 Ga0070713_100007965 Ga0070713_1000079657 606
22 3300021388 Ga0213875_10001180 Ga0213875_1000118015 606
23 3300025928 Ga0207700_10046499 Ga0207700_100464993 606
24 3300037853 Ga0436364_0892255 Ga0436364_0892255_32457_34403 606
25 3300049571 Ga0501034_0005474 Ga0501034_0005474_6937_8994 607
26 3300049573 Ga0501037_0018374 Ga0501037_0018374_1631_3688 607
27 3300049574 Ga0501038_0032492 Ga0501038_0032492_535_2592 607
28 3300049579 Ga0501043_0004365 Ga0501043_0004365_2122_4179 607
29 3300049580 Ga0501046_0007946 Ga0501046_0007946_5186_7243 607
30 3300049589 Ga0501073_0022418 Ga0501073_0022418_511_2568 607
31 3300049742 Ga0501080_0056822 Ga0501080_0056822_317_2374 607
32 3300049822 Ga0501035_0034251 Ga0501035_0034251_210_2267 607
33 3300025920 Ga0207649_10012053 Ga0207649_100120532 608
34 3300005539 Ga0068853_100018574 Ga0068853_1000185743 609
35 3300026041 Ga0207639_10011068 Ga0207639_100110684 609
36 3300038443 Ga0395901_0181880 Ga0395901_0181880_126_2072 611
37 3300005548 Ga0070665_100000752 Ga0070665_10000075242 612
38 3300028379 Ga0268266_10000744 Ga0268266_1000074446 612
39 3300037312 Ga0395899_0015173 Ga0395899_0015173_3709_5655 612
40 3300038443 Ga0395901_0000624 Ga0395901_0000624_7370_9298 613
41 3300003215 JGI25153J46596_10000293 JGI25153J46596_1000029313 615
42 3300025297 Ga0209758_1000013 Ga0209758_100001347 615
43 3300010375 Ga0105239_10002243 Ga0105239_1000224317 616
44 3300048921 Ga0496118_0000704 Ga0496118_0000704_19339_21279 618
45 3300048924 Ga0496121_0047757 Ga0496121_0047757_1328_3268 618
46 3300053146 Ga0500588_0000324 Ga0500588_0000324_2261_4207 618
47 3300046492 Ga0495585_0000598 Ga0495585_0000598_11914_13854 619
48 3300009176 Ga0105242_10046252 Ga0105242_100462523 620
49 3300037418 Ga0395900_0040555 Ga0395900_0040555_2793_4733 620
50 3300049742 Ga0501080_0114602 Ga0501080_0114602_529_2457 620
51 3300060353 Ga0501082_0000841 Ga0501082_0000841_22669_24597 620
52 3300005530 Ga0070679_100010101 Ga0070679_1000101014 623
53 3300031250 Ga0265331_10000002 Ga0265331_10000002122 623
54 3300031595 Ga0265313_10003254 Ga0265313_100032546 623
55 3300031711 Ga0265314_10007292 Ga0265314_100072922 623
56 3300031711 Ga0265314_10041935 Ga0265314_100419352 623
57 iso_pu_bacteria 2856334872 2856335456 623
58 3300005616 Ga0068852_100019785 Ga0068852_1000197854 624
59 3300005577 Ga0068857_100041689 Ga0068857_1000416892 625
60 3300009551 Ga0105238_10016944 Ga0105238_100169444 625
61 3300026067 Ga0207678_10004617 Ga0207678_1000461712 625
62 3300026078 Ga0207702_10021916 Ga0207702_100219164 625
63 3300026116 Ga0207674_10014303 Ga0207674_100143033 625
64 3300044656 Ga0466969_0007505 Ga0466969_0007505_450_2444 625
65 3300047472 Ga0495686_0004739 Ga0495686_0004739_362_2302 625
66 3300054114 Ga0501084_0000033 Ga0501084_0000033_100703_102643 625
67 3300005344 Ga0070661_100000723 Ga0070661_10000072312 626
68 3300005539 Ga0068853_100002362 Ga0068853_1000023624 626
69 3300005563 Ga0068855_100075497 Ga0068855_1000754972 626
70 3300005578 Ga0068854_100001799 Ga0068854_1000017994 626
71 3300005614 Ga0068856_100039484 Ga0068856_1000394844 626
72 3300005616 Ga0068852_100001281 Ga0068852_10000128112 626
73 3300005834 Ga0068851_10001677 Ga0068851_100016776 626
74 3300009093 Ga0105240_10056883 Ga0105240_100568832 626
75 3300009545 Ga0105237_10023989 Ga0105237_100239893 626
76 3300009551 Ga0105238_10001812 Ga0105238_1000181214 626
77 3300010375 Ga0105239_10004382 Ga0105239_100043828 626
78 3300025914 Ga0207671_10019153 Ga0207671_100191535 626
79 3300025981 Ga0207640_10000994 Ga0207640_100009946 626
80 3300026041 Ga0207639_10041845 Ga0207639_100418454 626
81 3300026142 Ga0207698_10010395 Ga0207698_100103955 626
82 3300039437 Ga0436365_1016920 Ga0436365_1016920_791_3286 626
83 3300044684 Ga0466966_0000333 Ga0466966_0000333_26778_28772 626
84 3300002067 JGI24735J21928_10002731 JGI24735J21928_100027315 627
85 3300005327 Ga0070658_10006318 Ga0070658_100063189 627
86 3300005339 Ga0070660_100003629 Ga0070660_1000036296 627
87 3300005339 Ga0070660_100014917 Ga0070660_1000149172 627
88 3300005435 Ga0070714_100001511 Ga0070714_1000015116 627
89 3300005455 Ga0070663_100031871 Ga0070663_1000318713 627
90 3300005539 Ga0068853_100048288 Ga0068853_1000482882 627
91 3300005563 Ga0068855_100030963 Ga0068855_1000309634 627
92 3300005578 Ga0068854_100016288 Ga0068854_1000162885 627
93 3300005616 Ga0068852_100110087 Ga0068852_1001100872 627
94 3300009551 Ga0105238_10039200 Ga0105238_100392002 627
95 3300010375 Ga0105239_10027521 Ga0105239_100275213 627
96 3300013307 Ga0157372_10040497 Ga0157372_100404973 627
97 3300025261 Ga0209233_1000623 Ga0209233_100062310 627
98 3300025904 Ga0207647_10014945 Ga0207647_100149452 627
99 3300025909 Ga0207705_10001147 Ga0207705_100011474 627
100 3300025919 Ga0207657_10004038 Ga0207657_100040387 627
101 3300025919 Ga0207657_10016203 Ga0207657_100162034 627
102 3300025949 Ga0207667_10034323 Ga0207667_100343233 627
103 3300026067 Ga0207678_10048810 Ga0207678_100488102 627
104 3300044684 Ga0466966_0008508 Ga0466966_0008508_636_3140 627
105 3300045049 Ga0466959_0021873 Ga0466959_0021873_1778_4282 627
106 3300005539 Ga0068853_100028904 Ga0068853_1000289044 628
107 3300005563 Ga0068855_100003875 Ga0068855_10000387510 628
108 3300009093 Ga0105240_10045912 Ga0105240_100459122 628
109 3300009093 Ga0105240_10123486 Ga0105240_101234862 628
110 3300013104 Ga0157370_10002058 Ga0157370_1000205814 628
111 3300025913 Ga0207695_10012256 Ga0207695_100122562 628
112 3300025949 Ga0207667_10007298 Ga0207667_100072987 628
113 3300026041 Ga0207639_10021173 Ga0207639_100211732 628
114 3300049572 Ga0501036_0012392 Ga0501036_0012392_2993_4960 628
115 3300049580 Ga0501046_0003183 Ga0501046_0003183_5283_7250 628
116 iso_pu_bacteria 2643221541 2643727970 628
117 iso_pu_bacteria 2643221606 2644043080 628
118 iso_pu_bacteria 2643221671 2644395489 628
119 iso_pu_bacteria 8057101203 8057102507 628
120 3300005842 Ga0068858_100000823 Ga0068858_10000082323 629
121 3300026035 Ga0207703_10000832 Ga0207703_1000083223 629
122 3300037466 Ga0395898_0008469 Ga0395898_0008469_1052_3040 629
123 3300044842 Ga0466957_0002448 Ga0466957_0002448_566_2545 629
124 3300005339 Ga0070660_100004038 Ga0070660_1000040387 630
125 3300005344 Ga0070661_100000160 Ga0070661_10000016035 630
126 3300005344 Ga0070661_100001796 Ga0070661_1000017962 630
127 3300005366 Ga0070659_100035755 Ga0070659_1000357555 630
128 3300005563 Ga0068855_100038901 Ga0068855_1000389016 630
129 3300005614 Ga0068856_100003874 Ga0068856_1000038745 630
130 3300005616 Ga0068852_100002713 Ga0068852_1000027135 630
131 3300009093 Ga0105240_10005715 Ga0105240_100057157 630
132 3300009551 Ga0105238_10087425 Ga0105238_100874253 630
133 3300010375 Ga0105239_10045989 Ga0105239_100459896 630
134 3300013100 Ga0157373_10047209 Ga0157373_100472092 630
135 3300013102 Ga0157371_10006632 Ga0157371_1000663212 630
136 3300013105 Ga0157369_10000141 Ga0157369_1000014141 630
137 3300013105 Ga0157369_10004026 Ga0157369_100040264 630
138 3300021384 Ga0213876_10041929 Ga0213876_100419291 630
139 3300025909 Ga0207705_10000003 Ga0207705_10000003732 630
140 3300025909 Ga0207705_10000979 Ga0207705_100009793 630
141 3300025913 Ga0207695_10001859 Ga0207695_100018596 630
142 3300025919 Ga0207657_10003172 Ga0207657_100031727 630
143 3300025920 Ga0207649_10000029 Ga0207649_1000002959 630
144 3300025920 Ga0207649_10000285 Ga0207649_100002859 630
145 3300025949 Ga0207667_10004903 Ga0207667_100049036 630
146 3300025981 Ga0207640_10000260 Ga0207640_100002609 630
147 3300026067 Ga0207678_10005397 Ga0207678_100053972 630
148 3300026067 Ga0207678_10010795 Ga0207678_100107957 630
149 3300026078 Ga0207702_10062707 Ga0207702_100627072 630
150 3300026142 Ga0207698_10005585 Ga0207698_100055854 630
151 3300026142 Ga0207698_10015586 Ga0207698_100155866 630
152 3300031711 Ga0265314_10034658 Ga0265314_100346582 630
153 3300037312 Ga0395899_0060627 Ga0395899_0060627_279_2267 630
154 3300037466 Ga0395898_0045852 Ga0395898_0045852_1307_3295 630
155 3300039437 Ga0436365_0820294 Ga0436365_0820294_1695_3644 630
156 3300005435 Ga0070714_100005303 Ga0070714_1000053036 631
157 3300005436 Ga0070713_100005559 Ga0070713_1000055598 631
158 3300005614 Ga0068856_100023361 Ga0068856_1000233613 631
159 3300009093 Ga0105240_10004020 Ga0105240_1000402011 631
160 3300025913 Ga0207695_10096310 Ga0207695_100963102 631
161 3300025929 Ga0207664_10003321 Ga0207664_100033214 631
162 3300031250 Ga0265331_10000763 Ga0265331_1000076328 631
163 3300031251 Ga0265327_10000153 Ga0265327_1000015386 631
164 3300039450 Ga0436363_0622573 Ga0436363_0622573_831_2768 631
165 3300045049 Ga0466959_0008361 Ga0466959_0008361_2068_4065 631
166 3300003759 Ga0055525_1000274 Ga0055525_100027413 632
167 3300003762 Ga0055542_1000060 Ga0055542_1000060152 632
168 3300003763 Ga0055529_1000043 Ga0055529_100004316 632
169 3300005548 Ga0070665_100028692 Ga0070665_1000286923 632
170 3300005985 Ga0081539_10000577 Ga0081539_1000057746 632
171 3300009093 Ga0105240_10108644 Ga0105240_101086442 632
172 3300025230 Ga0209563_100106 Ga0209563_10010695 632
173 3300025254 Ga0209148_1000017 Ga0209148_1000017299 632
174 3300025272 Ga0209455_1000005 Ga0209455_1000005299 632
175 3300028379 Ga0268266_10000957 Ga0268266_1000095734 632
176 3300028379 Ga0268266_10066196 Ga0268266_100661963 632
177 3300046507 Ga0495606_0000215 Ga0495606_0000215_46315_48255 632
178 3300047445 Ga0495677_0001129 Ga0495677_0001129_613_2553 632
179 3300047472 Ga0495686_0000124 Ga0495686_0000124_135270_137210 632
180 3300048929 Ga0496126_0007321 Ga0496126_0007321_1616_3589 632
181 iso_pu_bacteria 8002060224 8002060600 632
182 3300025231 Ga0207427_100574 Ga0207427_10057414 633
183 3300025261 Ga0209233_1000278 Ga0209233_100027845 633
184 3300005577 Ga0068857_100063322 Ga0068857_1000633222 634
185 3300005616 Ga0068852_100032001 Ga0068852_1000320013 634
186 3300013104 Ga0157370_10008726 Ga0157370_100087266 634
187 3300025913 Ga0207695_10018490 Ga0207695_100184905 634
188 3300025914 Ga0207671_10003755 Ga0207671_1000375510 634
189 3300025932 Ga0207690_10044809 Ga0207690_100448093 634
190 3300026041 Ga0207639_10045543 Ga0207639_100455434 634
191 3300026116 Ga0207674_10122263 Ga0207674_101222632 634
192 3300026116 Ga0207674_10174342 Ga0207674_101743421 634
193 3300037418 Ga0395900_0015191 Ga0395900_0015191_1168_3135 634
194 3300048918 Ga0496115_0070631 Ga0496115_0070631_354_2306 634
195 3300049571 Ga0501034_0017206 Ga0501034_0017206_4803_6770 634
196 3300049580 Ga0501046_0004359 Ga0501046_0004359_10158_12104 634
197 3300049581 Ga0501047_0004926 Ga0501047_0004926_5268_7214 634
198 3300049582 Ga0501048_0006641 Ga0501048_0006641_672_2639 634
199 3300049741 Ga0501079_0008848 Ga0501079_0008848_5017_6984 634
200 3300053119 Ga0500595_000706 Ga0500595_000706_658_2610 634
201 3300028577 Ga0265318_10000143 Ga0265318_1000014326 635
202 3300005563 Ga0068855_100117494 Ga0068855_1001174942 636
203 3300025909 Ga0207705_10069170 Ga0207705_100691702 636
204 3300028800 Ga0265338_10004645 Ga0265338_100046458 636
205 3300031235 Ga0265330_10008507 Ga0265330_100085075 636
206 3300031241 Ga0265325_10001446 Ga0265325_1000144612 636
207 3300031251 Ga0265327_10006349 Ga0265327_100063494 636
208 3300031344 Ga0265316_10014131 Ga0265316_100141316 636
209 3300031595 Ga0265313_10000309 Ga0265313_1000030920 636
210 3300037312 Ga0395899_0016734 Ga0395899_0016734_2203_4155 636
211 3300005543 Ga0070672_100040369 Ga0070672_1000403692 639
212 3300005618 Ga0068864_100033233 Ga0068864_1000332333 639
213 3300006237 Ga0097621_100044505 Ga0097621_1000445053 639
214 3300006358 Ga0068871_100030522 Ga0068871_1000305224 639
215 3300025321 Ga0207656_10024295 Ga0207656_100242952 639
216 3300025903 Ga0207680_10005133 Ga0207680_100051333 639
217 3300025909 Ga0207705_10028998 Ga0207705_100289985 639
218 3300025919 Ga0207657_10044219 Ga0207657_100442194 639
219 3300025921 Ga0207652_10012023 Ga0207652_100120234 639
220 3300025931 Ga0207644_10003540 Ga0207644_100035408 639
221 3300025932 Ga0207690_10083658 Ga0207690_100836582 639
222 3300025933 Ga0207706_10043249 Ga0207706_100432493 639
223 3300025941 Ga0207711_10014035 Ga0207711_100140355 639
224 3300025981 Ga0207640_10007035 Ga0207640_100070352 639
225 3300048903 Ga0496100_0014189 Ga0496100_0014189_937_2907 639
226 3300048912 Ga0496109_0016457 Ga0496109_0016457_2143_4113 639
227 3300048917 Ga0496114_0033347 Ga0496114_0033347_1095_3065 639
228 3300001979 JGI24740J21852_10000122 JGI24740J21852_100001227 648
229 3300005455 Ga0070663_100000150 Ga0070663_10000015031 648
230 3300005577 Ga0068857_100061367 Ga0068857_1000613673 648
231 3300005614 Ga0068856_100000173 Ga0068856_1000001736 648
232 3300009174 Ga0105241_10000163 Ga0105241_100001636 648
233 3300009551 Ga0105238_10002290 Ga0105238_100022905 648
234 3300013100 Ga0157373_10000413 Ga0157373_1000041330 648
235 3300013104 Ga0157370_10030150 Ga0157370_100301505 648
236 3300025911 Ga0207654_10000020 Ga0207654_10000020143 648
237 3300025924 Ga0207694_10000453 Ga0207694_100004535 648
238 3300025949 Ga0207667_10002205 Ga0207667_1000220514 648
239 3300026067 Ga0207678_10002461 Ga0207678_100024615 648
240 3300026078 Ga0207702_10000214 Ga0207702_100002146 648

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00115

COX1

Cytochrome C and Quinol oxidase polypeptide I

96

459

0.98

PF00115

COX1

Cytochrome C and Quinol oxidase polypeptide I

40

100

0.97

PF00510

COX3

Cytochrome c oxidase subunit III

575

682

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8d4t-assembly1.cif.gz_N mammalian civ with gdn bound 0.8871 49 533
7vuw-assembly2.cif.gz_N bovine heart cytochrome c oxidase in the cyanide-bound fully oxidized state at 50 k 0.8859 49 533
7o3e-assembly1.cif.gz_a murine supercomplex ciii2civ in the intermediate locked conformation 0.8838 53 534
8c8q-assembly1.cif.gz_A cytochrome c oxidase from schizosaccharomyces pombe 0.8783 52 528
1fft-assembly2.cif.gz_F the structure of ubiquinol oxidase from escherichia coli 0.8775 54 534
ID Description Score Start End Superfamily
af_Q9ZZX1_1_342_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9201 53 369 1.20.210.10
af_P03878_1_258_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9099 52 291 1.20.210.10
af_O21042_10_509_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8633 49 507 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8578 52 547 1.20.210.10
af_Q9ZZX1_1_342_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8538 53 369 1.20.210.10
ID Description Score Start End GO Terms
AF-A0A4U3ANU3-F1-model_v4 deleted 0.9627 49 151
AF-A0A6L6CXN6-F1-model_v4 Cytochrome ubiquinol oxidase subunit I 0.9471 41 152 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-A0A076N189-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9346 182 306 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-A0A1H0M2Z6-F1-model_v4 Cytochrome C and Quinol oxidase polypeptide I 0.9274 49 160 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-A0A4Y5QAW3-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9272 52 283 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872

Feature Viewer

pLDDT pTM Quality
79.02 0.82 High
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Predicted Structure (AlphaFold2)

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