F352289

General Info

Members Datasets Scaffolds Average Seq Length
239 183 478 300

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0042002|Ga0501031_0042002_779_1663
Length 280
Sequence MTTSAVQEQAARPPGATAGPRARAAGVALMLGSGLSNQVGAATGALAFPVIGPAGVVAVRQWVAGVLLWAVGRPRVRRFTWPQWWPVLSLALVFGTMNLSLYTAIDRIGLGLAVTLEFLGPLAVALAASRRRLDARPQPTTDYLGIALALLAAACWASYILLNRVIGRRLPGAEGPAAAAGLSALAYVPIGIFTLSLHPPTARALGDAAAAGVLSSAVPFLADLLTLRRVPARFFGVFMSVNPVLAALVGWVVLGQSLGWAEWLAITTIVAANSVSAVTA

Samples

Sample ID Description Type Environment
1 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
32 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
33 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
46 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
47 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
48 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
49 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
52 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
53 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
60 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
61 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
62 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
63 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
64 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
65 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
66 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
67 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
68 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
69 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
70 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
71 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
74 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
75 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
76 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
77 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
78 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
79 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
80 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
81 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
82 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
83 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
84 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
85 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
86 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
89 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
90 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
91 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
92 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
93 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
94 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
95 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
96 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
97 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
98 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
99 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
100 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
101 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
104 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
105 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
109 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
110 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
111 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
116 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
117 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
118 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
154 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
155 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
160 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
161 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
162 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
163 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
164 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
165 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
166 2862574272 Streptomyces sp. AcE210 Isolate Nodule
167 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
168 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
169 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
170 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
171 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
172 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
173 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
174 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
175 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
176 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
177 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
178 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
179 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
180 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
181 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
182 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
183 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.12
Metatranscriptomes 0.42
Isolates 10.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.93
Nodule 1.26
Rhizoplane 1.67
Rhizosphere 87.03
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501031_0042002 3300049568 Bacteria 2985
2 JGI24739J22299_10006653 3300001989 Bacteria 4350
3 JGI24738J21930_10010456 3300002075 Bacteria 2065
4 JGI25406J46586_10003898 3300003203 Bacteria 6974
5 JGI25160J50197_1014730 3300003354 Bacteria 2601
6 JGI25160J50197_1016922 3300003354 Bacteria 2331
7 JGI25407J50210_10000495 3300003373 Bacteria 7874
8 Ga0070709_10000671 3300005434 Bacteria 19524
9 Ga0070709_10014304 3300005434 Bacteria 4486
10 Ga0070714_100001059 3300005435 Bacteria 19650
11 Ga0070713_100003223 3300005436 Bacteria 10746
12 Ga0070713_100081498 3300005436 Bacteria 2761
13 Ga0070710_10000164 3300005437 Bacteria 30733
14 Ga0070710_10001486 3300005437 Bacteria 11028
15 Ga0070710_10019516 3300005437 Bacteria 3504
16 Ga0070711_100001597 3300005439 Bacteria 12490
17 Ga0070711_100214667 3300005439 Bacteria 1492
18 Ga0070708_100014822 3300005445 Bacteria 6424
19 Ga0070662_100096173 3300005457 Bacteria 2234
20 Ga0070707_100074439 3300005468 Bacteria 3275
21 Ga0070698_100109759 3300005471 Bacteria 2725
22 Ga0070697_100056191 3300005536 Bacteria 3202
23 Ga0068857_100265671 3300005577 Bacteria 1576
24 Ga0068856_100200964 3300005614 Bacteria 2007
25 Ga0068861_100043814 3300005719 Bacteria 3361
26 Ga0081538_10000734 3300005981 Bacteria 35846
27 Ga0081538_10003398 3300005981 Bacteria 15068
28 Ga0081538_10006888 3300005981 Bacteria 9894
29 Ga0081538_10012355 3300005981 Bacteria 6845
30 Ga0081540_1003203 3300005983 Bacteria 13037
31 Ga0081539_10000601 3300005985 Bacteria 73299
32 Ga0081539_10032481 3300005985 Bacteria 3197
33 Ga0070716_100001960 3300006173 Bacteria 9356
34 Ga0070712_100145131 3300006175 Bacteria 1815
35 Ga0075430_100018466 3300006846 Bacteria 5933
36 Ga0075433_10007047 3300006852 Bacteria 8904
37 Ga0105240_10412425 3300009093 Bacteria 1519
38 Ga0111539_10010866 3300009094 Bacteria 11458
39 Ga0114129_10075932 3300009147 Bacteria 4679
40 Ga0157375_10116277 3300013308 Bacteria 2778
41 Ga0183367_1001 3300015688 Bacteria 1225545
42 Ga0207426_1000716 3300025302 Bacteria 38582
43 Ga0207426_1001278 3300025302 Bacteria 21869
44 Ga0207426_1002919 3300025302 Bacteria 10075
45 Ga0207692_10002414 3300025898 Bacteria 7169
46 Ga0207647_10004417 3300025904 Bacteria 10428
47 Ga0207699_10000560 3300025906 Bacteria 18349
48 Ga0207684_10014977 3300025910 Bacteria 6675
49 Ga0207693_10002641 3300025915 Bacteria 15570
50 Ga0207693_10054898 3300025915 Bacteria 3125
51 Ga0207663_10003593 3300025916 Bacteria 7607
52 Ga0207646_10056889 3300025922 Bacteria 3495
53 Ga0207700_10000263 3300025928 Bacteria 31277
54 Ga0207700_10000366 3300025928 Bacteria 26382
55 Ga0207664_10000774 3300025929 Bacteria 21597
56 Ga0207664_10020188 3300025929 Bacteria 4935
57 Ga0207706_10013714 3300025933 Bacteria 7355
58 Ga0207665_10010365 3300025939 Bacteria 6122
59 Ga0207708_10000004 3300026075 Bacteria 293087
60 Ga0207428_10011244 3300027907 Bacteria 7935
61 Ga0307517_10027679 3300028786 Bacteria 6796
62 Ga0307509_10059923 3300031507 Bacteria 4026
63 Ga0307508_10019399 3300031616 Bacteria 6181
64 Ga0307514_10098201 3300031649 Bacteria 2111
65 Ga0307405_10003927 3300031731 Bacteria 6946
66 Ga0307405_10006151 3300031731 Bacteria 5878
67 Ga0307405_10366080 3300031731 Bacteria 1117
68 Ga0307413_10015570 3300031824 Bacteria 3902
69 Ga0307410_10343951 3300031852 Bacteria 1190
70 Ga0326468_10000362 3300031889 Bacteria 4803
71 Ga0307406_10002981 3300031901 Bacteria 9228
72 Ga0307406_10015587 3300031901 Bacteria 4401
73 Ga0307406_10455039 3300031901 Bacteria 1028
74 Ga0307407_10000906 3300031903 Bacteria 10013
75 Ga0307407_10148326 3300031903 Bacteria 1521
76 Ga0307409_100002480 3300031995 Bacteria 9664
77 Ga0307409_100005200 3300031995 Bacteria 7447
78 Ga0307416_100000231 3300032002 Bacteria 29695
79 Ga0307416_100000528 3300032002 Bacteria 19514
80 Ga0307416_100035328 3300032002 Bacteria 3815
81 Ga0307416_100062029 3300032002 Bacteria 3055
82 Ga0307416_100085887 3300032002 Bacteria 2680
83 Ga0307416_100151464 3300032002 Bacteria 2127
84 Ga0307416_100431307 3300032002 Bacteria 1365
85 Ga0307415_100002333 3300032126 Bacteria 9436
86 Ga0307415_100024178 3300032126 Bacteria 3788
87 Ga0307415_100067674 3300032126 Bacteria 2497
88 Ga0307415_100068871 3300032126 Bacteria 2478
89 Ga0307415_100100560 3300032126 Bacteria 2119
90 Ga0307415_100189557 3300032126 Bacteria 1621
91 Ga0307507_10000140 3300033179 Bacteria 125574
92 Ga0307507_10019167 3300033179 Bacteria 7720
93 Ga0307510_10052727 3300033180 Bacteria 4283
94 Ga0373926_0006048 3300035083 Bacteria 4007
95 Ga0373944_0010606 3300035089 Bacteria 2513
96 Ga0373936_0002019 3300035113 Bacteria 7510
97 Ga0373945_0003190 3300035116 Bacteria 5143
98 Ga0373943_0001780 3300035170 Bacteria 9754
99 Ga0373946_0002538 3300035171 Bacteria 6454
100 Ga0373935_0002795 3300035692 Bacteria 10046
101 Ga0373927_0024165 3300035695 Bacteria 3975
102 Ga0373947_0004957 3300035725 Bacteria 7787
103 Ga0372808_002004 3300036459 Bacteria 2260
104 Ga0373925_0004123 3300037068 Bacteria 11028
105 Ga0395898_0449508 3300037466 Bacteria 1227
106 Ga0395901_0098558 3300038443 Bacteria 3065
107 Ga0395901_0139500 3300038443 Bacteria 2548
108 Ga0439436_0001551 3300041404 Bacteria 6690
109 Ga0451853_2345096 3300041512 Bacteria 3271
110 Ga0439450_000004 3300042008 Bacteria 26188
111 Ga0439457_001039 3300042014 Bacteria 8383
112 Ga0439463_000380 3300042016 Bacteria 12226
113 Ga0439444_0000094 3300042437 Bacteria 6952
114 Ga0439459_0036561 3300042438 Bacteria 1025
115 Ga0439464_0000109 3300042439 Bacteria 12582
116 Ga0439460_0003367 3300042461 Bacteria 3865
117 Ga0450916_001874 3300042530 Bacteria 2159
118 Ga0439440_0000031 3300042993 Bacteria 17654
119 Ga0466972_0052140 3300044658 Bacteria 1972
120 Ga0466965_0008578 3300044683 Bacteria 4730
121 Ga0466961_0081989 3300044693 Bacteria 2041
122 Ga0466963_0280330 3300044694 Bacteria 1171
123 Ga0466968_0031367 3300044735 Bacteria 2205
124 Ga0466960_0012308 3300044901 Bacteria 3606
125 Ga0495603_0002657 3300046455 Bacteria 10539
126 Ga0495629_0052398 3300046459 Bacteria 2855
127 Ga0495653_0011455 3300046463 Bacteria 7248
128 Ga0495605_0001953 3300046474 Bacteria 13092
129 Ga0495664_0004614 3300046477 Bacteria 7534
130 Ga0495594_0008388 3300046499 Bacteria 5324
131 Ga0495594_0091944 3300046499 Bacteria 1701
132 Ga0495606_0021830 3300046507 Bacteria 4682
133 Ga0495616_0043290 3300046513 Bacteria 2287
134 Ga0495618_0032190 3300046514 Bacteria 3284
135 Ga0495620_0014530 3300046515 Bacteria 3999
136 Ga0495630_0006710 3300046517 Bacteria 8200
137 Ga0495652_0032020 3300046529 Bacteria 4600
138 Ga0495640_0049128 3300046533 Bacteria 2911
139 Ga0495609_0094320 3300046538 Bacteria 1300
140 Ga0495622_0009561 3300046557 Bacteria 4487
141 Ga0495634_0027889 3300046642 Bacteria 3925
142 Ga0495625_0138318 3300046660 Bacteria 1644
143 Ga0495635_0018180 3300046663 Bacteria 4907
144 Ga0495661_0067028 3300046665 Bacteria 2110
145 Ga0495670_0055249 3300046691 Bacteria 1991
146 Ga0495636_0063792 3300047318 Bacteria 1562
147 Ga0495674_0010355 3300047319 Bacteria 8827
148 Ga0495676_0032755 3300047321 Bacteria 4383
149 Ga0495676_0036927 3300047321 Bacteria 4073
150 Ga0495676_0149992 3300047321 Bacteria 1660
151 Ga0495680_0035045 3300047322 Bacteria 4046
152 Ga0495687_002848 3300047443 Bacteria 13294
153 Ga0495681_0036452 3300047470 Bacteria 2432
154 Ga0495614_0016703 3300048089 Bacteria 3193
155 Ga0495626_0023382 3300048091 Bacteria 3044
156 Ga0496108_0395067 3300048911 Bacteria 1208
157 Ga0496113_0405542 3300048916 Bacteria 1095
158 Ga0496114_0013728 3300048917 Bacteria 6493
159 Ga0495678_028973 3300049459 Bacteria 2330
160 Ga0501031_0026220 3300049568 Bacteria 3801
161 Ga0501032_0035265 3300049569 Bacteria 3421
162 Ga0501032_0077208 3300049569 Bacteria 2218
163 Ga0501033_0014954 3300049570 Bacteria 5890
164 Ga0501036_0060323 3300049572 Bacteria 3213
165 Ga0501037_0073485 3300049573 Bacteria 2486
166 Ga0501038_0021739 3300049574 Bacteria 5756
167 Ga0501038_0091401 3300049574 Bacteria 2550
168 Ga0501039_0011921 3300049575 Bacteria 6624
169 Ga0501039_0012805 3300049575 Bacteria 6412
170 Ga0501040_0000106 3300049576 Bacteria 42802
171 Ga0501041_0001506 3300049577 Bacteria 12920
172 Ga0501041_0024599 3300049577 Bacteria 3616
173 Ga0501042_0000023 3300049578 Bacteria 49896
174 Ga0501043_0013499 3300049579 Bacteria 6391
175 Ga0501046_0000281 3300049580 Bacteria 51692
176 Ga0501046_0007171 3300049580 Bacteria 9809
177 Ga0501048_0002635 3300049582 Bacteria 13718
178 Ga0501048_0019003 3300049582 Bacteria 5049
179 Ga0501068_0090817 3300049584 Bacteria 1884
180 Ga0501071_0000924 3300049587 Bacteria 15913
181 Ga0501071_0034646 3300049587 Bacteria 3594
182 Ga0501072_0001632 3300049588 Bacteria 16787
183 Ga0501072_0009747 3300049588 Bacteria 7304
184 Ga0501074_0000080 3300049590 Bacteria 47252
185 Ga0501074_0031071 3300049590 Bacteria 3870
186 Ga0501075_0063849 3300049591 Bacteria 2777
187 Ga0501076_0000018 3300049592 Bacteria 92605
188 Ga0501076_0001029 3300049592 Bacteria 18341
189 Ga0501077_0003721 3300049593 Bacteria 9174
190 Ga0501079_0000128 3300049741 Bacteria 40662
191 Ga0501079_0003384 3300049741 Bacteria 11706
192 Ga0501080_0023641 3300049742 Bacteria 5695
193 Ga0501080_0109378 3300049742 Bacteria 2562
194 Ga0501081_0000388 3300049743 Bacteria 24270
195 Ga0501081_0001761 3300049743 Bacteria 13425
196 Ga0501035_0021226 3300049822 Bacteria 5969
197 Ga0501044_0438282 3300049823 Bacteria 1215
198 Ga0501045_0002311 3300049824 Bacteria 12930
199 Ga0501045_0002399 3300049824 Bacteria 12735
200 nmdc:mga05p37_22919_c1 3300050507 Bacteria 7574
201 nmdc:mga0qj67_12400_c1 3300050509 Bacteria 6421
202 nmdc:mga0qj67_156093_c1 3300050509 Bacteria 1852
203 nmdc:mga08y16_11780_c1 3300050511 Bacteria 9189
204 nmdc:mga0n895_128278_c1 3300050512 Bacteria 2561
205 nmdc:mga0a205_17147_c2 3300050515 Bacteria 6196
206 nmdc:mga0a205_5318_c1 3300050515 Bacteria 11597
207 Ga0495595_0061336 3300053084 Bacteria 1761
208 Ga0500573_0148219 3300053140 Bacteria 1287
209 Ga0500577_0003743 3300053142 Bacteria 3963
210 Ga0501084_0002767 3300054114 Bacteria 14161
211 Ga0501084_0097721 3300054114 Bacteria 2465
212 Ga0501082_0000096 3300060353 Bacteria 67949
213 Ga0501082_0008330 3300060353 Bacteria 8943
214 Ga0530510_0005350 3300061734 Bacteria 8879
215 2616697855 2616644814 Bacteria 11555299
216 2785339603 2784746763 Bacteria 9783172
217 2816423356 2816332119 Bacteria 8120218
218 2816506480 2816332139 Bacteria 9138787
219 2852677546 2852677369 Bacteria 3768884
220 2862282982 2862281513 Bacteria 9621493
221 2862392872 2862382967 Bacteria 10317375
222 2862581576 2862574272 Bacteria 10567477
223 2863073869 2863067949 Bacteria 8541735
224 2863410484 2863404153 Bacteria 9672205
225 2870790284 2870782633 Bacteria 9624083
226 2917743166 2917736166 Bacteria 9690793
227 2946064706 2946064051 Bacteria 8957905
228 2990065027 2990059506 Bacteria 9321252
229 2995470377 2995463766 Bacteria 8577691
230 2997600596 2997600082 Bacteria 9896405
231 8008564405 8008558824 Bacteria 10610750
232 8047901453 8047893842 Bacteria 11723082
233 8048357443 8048356638 Bacteria 11044339
234 8048378393 8048369669 Bacteria 11666822
235 8048387494 8048379754 Bacteria 11877923
236 8053947514 8053945823 Bacteria 8962862
237 8054110125 8054107350 Bacteria 5022511
238 8056210560 8056207758 Bacteria 8639239
239 8056830502 8056829672 Bacteria 9045328
240 Ga0501031_0042002
241 JGI24739J22299_10006653
242 JGI24738J21930_10010456
243 JGI25406J46586_10003898
244 JGI25160J50197_1014730
245 JGI25160J50197_1016922
246 JGI25407J50210_10000495
247 Ga0070709_10000671
248 Ga0070709_10014304
249 Ga0070714_100001059
250 Ga0070713_100003223
251 Ga0070713_100081498
252 Ga0070710_10000164
253 Ga0070710_10001486
254 Ga0070710_10019516
255 Ga0070711_100001597
256 Ga0070711_100214667
257 Ga0070708_100014822
258 Ga0070662_100096173
259 Ga0070707_100074439
260 Ga0070698_100109759
261 Ga0070697_100056191
262 Ga0068857_100265671
263 Ga0068856_100200964
264 Ga0068861_100043814
265 Ga0081538_10000734
266 Ga0081538_10003398
267 Ga0081538_10006888
268 Ga0081538_10012355
269 Ga0081540_1003203
270 Ga0081539_10000601
271 Ga0081539_10032481
272 Ga0070716_100001960
273 Ga0070712_100145131
274 Ga0075430_100018466
275 Ga0075433_10007047
276 Ga0105240_10412425
277 Ga0111539_10010866
278 Ga0114129_10075932
279 Ga0157375_10116277
280 Ga0183367_1001
281 Ga0207426_1000716
282 Ga0207426_1001278
283 Ga0207426_1002919
284 Ga0207692_10002414
285 Ga0207647_10004417
286 Ga0207699_10000560
287 Ga0207684_10014977
288 Ga0207693_10002641
289 Ga0207693_10054898
290 Ga0207663_10003593
291 Ga0207646_10056889
292 Ga0207700_10000263
293 Ga0207700_10000366
294 Ga0207664_10000774
295 Ga0207664_10020188
296 Ga0207706_10013714
297 Ga0207665_10010365
298 Ga0207708_10000004
299 Ga0207428_10011244
300 Ga0307517_10027679
301 Ga0307509_10059923
302 Ga0307508_10019399
303 Ga0307514_10098201
304 Ga0307405_10003927
305 Ga0307405_10006151
306 Ga0307405_10366080
307 Ga0307413_10015570
308 Ga0307410_10343951
309 Ga0326468_10000362
310 Ga0307406_10002981
311 Ga0307406_10015587
312 Ga0307406_10455039
313 Ga0307407_10000906
314 Ga0307407_10148326
315 Ga0307409_100002480
316 Ga0307409_100005200
317 Ga0307416_100000231
318 Ga0307416_100000528
319 Ga0307416_100035328
320 Ga0307416_100062029
321 Ga0307416_100085887
322 Ga0307416_100151464
323 Ga0307416_100431307
324 Ga0307415_100002333
325 Ga0307415_100024178
326 Ga0307415_100067674
327 Ga0307415_100068871
328 Ga0307415_100100560
329 Ga0307415_100189557
330 Ga0307507_10000140
331 Ga0307507_10019167
332 Ga0307510_10052727
333 Ga0373926_0006048
334 Ga0373944_0010606
335 Ga0373936_0002019
336 Ga0373945_0003190
337 Ga0373943_0001780
338 Ga0373946_0002538
339 Ga0373935_0002795
340 Ga0373927_0024165
341 Ga0373947_0004957
342 Ga0372808_002004
343 Ga0373925_0004123
344 Ga0395898_0449508
345 Ga0395901_0098558
346 Ga0395901_0139500
347 Ga0439436_0001551
348 Ga0451853_2345096
349 Ga0439450_000004
350 Ga0439457_001039
351 Ga0439463_000380
352 Ga0439444_0000094
353 Ga0439459_0036561
354 Ga0439464_0000109
355 Ga0439460_0003367
356 Ga0450916_001874
357 Ga0439440_0000031
358 Ga0466972_0052140
359 Ga0466965_0008578
360 Ga0466961_0081989
361 Ga0466963_0280330
362 Ga0466968_0031367
363 Ga0466960_0012308
364 Ga0495603_0002657
365 Ga0495629_0052398
366 Ga0495653_0011455
367 Ga0495605_0001953
368 Ga0495664_0004614
369 Ga0495594_0008388
370 Ga0495594_0091944
371 Ga0495606_0021830
372 Ga0495616_0043290
373 Ga0495618_0032190
374 Ga0495620_0014530
375 Ga0495630_0006710
376 Ga0495652_0032020
377 Ga0495640_0049128
378 Ga0495609_0094320
379 Ga0495622_0009561
380 Ga0495634_0027889
381 Ga0495625_0138318
382 Ga0495635_0018180
383 Ga0495661_0067028
384 Ga0495670_0055249
385 Ga0495636_0063792
386 Ga0495674_0010355
387 Ga0495676_0032755
388 Ga0495676_0036927
389 Ga0495676_0149992
390 Ga0495680_0035045
391 Ga0495687_002848
392 Ga0495681_0036452
393 Ga0495614_0016703
394 Ga0495626_0023382
395 Ga0496108_0395067
396 Ga0496113_0405542
397 Ga0496114_0013728
398 Ga0495678_028973
399 Ga0501031_0026220
400 Ga0501032_0035265
401 Ga0501032_0077208
402 Ga0501033_0014954
403 Ga0501036_0060323
404 Ga0501037_0073485
405 Ga0501038_0021739
406 Ga0501038_0091401
407 Ga0501039_0011921
408 Ga0501039_0012805
409 Ga0501040_0000106
410 Ga0501041_0001506
411 Ga0501041_0024599
412 Ga0501042_0000023
413 Ga0501043_0013499
414 Ga0501046_0000281
415 Ga0501046_0007171
416 Ga0501048_0002635
417 Ga0501048_0019003
418 Ga0501068_0090817
419 Ga0501071_0000924
420 Ga0501071_0034646
421 Ga0501072_0001632
422 Ga0501072_0009747
423 Ga0501074_0000080
424 Ga0501074_0031071
425 Ga0501075_0063849
426 Ga0501076_0000018
427 Ga0501076_0001029
428 Ga0501077_0003721
429 Ga0501079_0000128
430 Ga0501079_0003384
431 Ga0501080_0023641
432 Ga0501080_0109378
433 Ga0501081_0000388
434 Ga0501081_0001761
435 Ga0501035_0021226
436 Ga0501044_0438282
437 Ga0501045_0002311
438 Ga0501045_0002399
439 nmdc:mga05p37_22919_c1
440 nmdc:mga0qj67_12400_c1
441 nmdc:mga0qj67_156093_c1
442 nmdc:mga08y16_11780_c1
443 nmdc:mga0n895_128278_c1
444 nmdc:mga0a205_17147_c2
445 nmdc:mga0a205_5318_c1
446 Ga0495595_0061336
447 Ga0500573_0148219
448 Ga0500577_0003743
449 Ga0501084_0002767
450 Ga0501084_0097721
451 Ga0501082_0000096
452 Ga0501082_0008330
453 Ga0530510_0005350
454 2616697855
455 2785339603
456 2816423356
457 2816506480
458 2852677546
459 2862282982
460 2862392872
461 2862581576
462 2863073869
463 2863410484
464 2870790284
465 2917743166
466 2946064706
467 2990065027
468 2995470377
469 2997600596
470 8008564405
471 8047901453
472 8048357443
473 8048378393
474 8048387494
475 8053947514
476 8054110125
477 8056210560
478 8056830502

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00892

EamA

EamA-like transporter family

143

277

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5y79-assembly1.cif.gz_B crystal structure of the triose-phosphate/phosphate translocator in complex with 3-phosphoglycerate 0.785 18 292
5y79-assembly1.cif.gz_B crystal structure of the triose-phosphate/phosphate translocator in complex with 3-phosphoglycerate 0.7381 18 292
7paf-assembly1.cif.gz_D streptococcus pneumoniae choline importer licb in lipid nanodiscs 0.7297 27 288
7b0k-assembly1.cif.gz_A membrane protein structure 0.7152 27 287
7b0k-assembly1.cif.gz_A membrane protein structure 0.703 27 287
ID Description Score Start End Superfamily
af_G4S7C7_57_179_1.10.3730.20 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold; 0.8415 223 294 1.10.3730.20
af_A0A0P0WMA8_96_409_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7865 27 290 1.20.1740.10
af_Q8RY83_36_351_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7698 26 291 1.20.1740.10
af_Q20583_6_327_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7425 25 292 1.20.1740.10
af_Q47377_2_110_1.10.3730.20 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold; 0.7201 217 286 1.10.3730.20
ID Description Score Start End GO Terms
AF-A0A1H5Q4J6-F1-model_v4 Inner membrane transporter RhtA 0.9766 21 294 GO:0016020
AF-A0A5R9BHN5-F1-model_v4 NUDIX domain-containing protein 0.9754 25 294 GO:0016020
GO:0016787
AF-A0A371Q3R0-F1-model_v4 EamA family transporter 0.9736 26 289 GO:0016020
AF-A0A2S5YCE3-F1-model_v4 EamA family transporter 0.9714 18 293 GO:0005886
GO:0015565
AF-A0A1H6ZFZ9-F1-model_v4 Inner membrane transporter RhtA 0.9709 23 293 GO:0005886
GO:0015565

Map