F352280
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 239 | 184 | 478 | 389 |
Family's Representative Sequence
| Representative Sequence | 3300048925|Ga0496122_0000403|Ga0496122_0000403_8187_9377 |
| Length | 396 |
| Sequence | MLRWLTSGESHGPALVGVLEGLPAGVEVESAHIRAALARRRLGYGRGARMSFEQDEVRILGGVRLGESQGGPVAIEIGNTEWPKWVDVMSSDPVDDPEKLNRARNAPLTRPRPGHADLVGMRKYAFDDARPVLERASARETAARVALGTVAARFLEQAAGVRLVSHVVGIGPVTVPDGTVLPTPDDVEALDADPVRCLDAATSAAMVAEIDDCHKAGDTLGGVVEVLVYGLPSGLGSYVHADRRLDARLAGALMGIQAIKGVEVGDGFRTATRRGSQAHDEMARDADGVIRRATNRAGGLEGGMTNGEVLRVRAAMKPISTVPRALATVDTASGEPATAQHQRSDVCAVPPAAVVAEAMVALXXADALLEKTGGDSVGEVRRNLEAYVAAIPDLLR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 2 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 3 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 4 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 6 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 15 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 20 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 21 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 22 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 23 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 24 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 25 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 26 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 27 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 29 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 30 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 32 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 33 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 34 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 35 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 36 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 38 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 54 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 55 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 56 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 79 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 80 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 81 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 82 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 83 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 84 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 85 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 86 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 87 | 3300034820 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 | Metagenome | Rhizosphere |
| 88 | 3300035084 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 | Metagenome | Rhizosphere |
| 89 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 90 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 91 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 92 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 93 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 94 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 95 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 96 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 97 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 98 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 99 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 100 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 101 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 102 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 103 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 104 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 105 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 106 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 107 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 108 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 109 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 110 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 111 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 112 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 113 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 114 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 138 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 139 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 140 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 141 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 142 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 143 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 144 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 145 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 146 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 147 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 148 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 149 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 150 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 151 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 152 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 153 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 154 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 155 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 156 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 157 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 158 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 159 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 160 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 161 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 162 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 163 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 164 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 165 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 166 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 167 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 168 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 169 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 170 | 3300053079 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere | Metagenome | Endosphere |
| 171 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 172 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 173 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 174 | 2558860112 | Pseudonocardia acaciae DSM 45401 | Isolate | Unclassified |
| 175 | 2622736605 | Geodermatophilus ruber DSM 45317 | Isolate | Rhizosphere |
| 176 | 2643221635 | Yonghaparkia sp. Root332 | Isolate | Unclassified |
| 177 | 2643221690 | Cellulomonas sp. Root485 | Isolate | Unclassified |
| 178 | 2811994880 | Cellulomonas sp. SLBN-39 | Isolate | Unclassified |
| 179 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 180 | 2857710386 | Brevibacterium sp. R-73093 | Isolate | Unclassified |
| 181 | 2870782633 | Pseudonocardia eucalypti DSM 45351 | Isolate | Unclassified |
| 182 | 2884994152 | Cellulomonas sp. H30R-01 | Isolate | Rhizosphere |
| 183 | 2891326441 | Actinokineospora pegani TRM65233 | Isolate | Unclassified |
| 184 | 2932431166 | Cellulosimicrobium sp. 4261 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.4 |
| Metatranscriptomes | 0 |
| Isolates | 4.6 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.26 |
| Nodule | 0 |
| Rhizoplane | 9.62 |
| Rhizosphere | 79.92 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0496122_0000403 | 3300048925 | Bacteria | 91680 |
| 2 | Ga0070690_100062304 | 3300005330 | Bacteria | 2405 |
| 3 | Ga0068869_100054112 | 3300005334 | Bacteria | 2920 |
| 4 | Ga0070682_100076542 | 3300005337 | Bacteria | 2154 |
| 5 | Ga0068868_100022963 | 3300005338 | Bacteria | 4716 |
| 6 | Ga0068868_100022989 | 3300005338 | Bacteria | 4714 |
| 7 | Ga0068868_100247107 | 3300005338 | Bacteria | 1500 |
| 8 | Ga0070660_100126578 | 3300005339 | Bacteria | 2041 |
| 9 | Ga0070689_100042391 | 3300005340 | Bacteria | 3495 |
| 10 | Ga0070714_100037818 | 3300005435 | Bacteria | 4057 |
| 11 | Ga0070713_100001914 | 3300005436 | Bacteria | 13422 |
| 12 | Ga0070711_100003285 | 3300005439 | Bacteria | 9404 |
| 13 | Ga0070694_100093230 | 3300005444 | Bacteria | 2117 |
| 14 | Ga0070678_100110278 | 3300005456 | Bacteria | 2152 |
| 15 | Ga0070662_100117743 | 3300005457 | Bacteria | 2032 |
| 16 | Ga0070681_10062593 | 3300005458 | Bacteria | 3694 |
| 17 | Ga0070706_100163548 | 3300005467 | Bacteria | 2078 |
| 18 | Ga0070707_100013645 | 3300005468 | Bacteria | 7609 |
| 19 | Ga0070672_100075594 | 3300005543 | Bacteria | 2689 |
| 20 | Ga0070696_100190775 | 3300005546 | Bacteria | 1525 |
| 21 | Ga0068856_100015162 | 3300005614 | Bacteria | 7445 |
| 22 | Ga0068856_100063283 | 3300005614 | Bacteria | 3655 |
| 23 | Ga0068856_100111717 | 3300005614 | Bacteria | 2730 |
| 24 | Ga0068852_100008138 | 3300005616 | Bacteria | 7700 |
| 25 | Ga0068852_100229351 | 3300005616 | Bacteria | 1769 |
| 26 | Ga0068859_100084354 | 3300005617 | Bacteria | 3222 |
| 27 | Ga0068863_100101447 | 3300005841 | Bacteria | 2736 |
| 28 | Ga0068858_100012630 | 3300005842 | Bacteria | 7963 |
| 29 | Ga0068860_100328284 | 3300005843 | Bacteria | 1502 |
| 30 | Ga0081455_10002532 | 3300005937 | Bacteria | 21716 |
| 31 | Ga0081540_1015016 | 3300005983 | Bacteria | 4921 |
| 32 | Ga0070717_10004329 | 3300006028 | Bacteria | 10243 |
| 33 | Ga0070717_10194558 | 3300006028 | Bacteria | 1773 |
| 34 | Ga0070717_10313109 | 3300006028 | Bacteria | 1397 |
| 35 | Ga0075365_10012044 | 3300006038 | Bacteria | 5116 |
| 36 | Ga0070715_10000727 | 3300006163 | Bacteria | 8894 |
| 37 | Ga0070715_10023226 | 3300006163 | Bacteria | 2427 |
| 38 | Ga0070716_100010061 | 3300006173 | Bacteria | 4732 |
| 39 | Ga0070712_100152962 | 3300006175 | Bacteria | 1773 |
| 40 | Ga0070712_100216357 | 3300006175 | Bacteria | 1514 |
| 41 | Ga0075428_100053920 | 3300006844 | Bacteria | 4406 |
| 42 | Ga0075433_10026474 | 3300006852 | Bacteria | 4909 |
| 43 | Ga0075434_100144143 | 3300006871 | Bacteria | 2402 |
| 44 | Ga0075436_100041022 | 3300006914 | Bacteria | 3194 |
| 45 | Ga0097620_100084364 | 3300006931 | Bacteria | 3222 |
| 46 | Ga0075435_100091334 | 3300007076 | Bacteria | 2513 |
| 47 | Ga0105240_10056884 | 3300009093 | Bacteria | 4891 |
| 48 | Ga0105245_10056169 | 3300009098 | Bacteria | 3538 |
| 49 | Ga0105243_10004074 | 3300009148 | Bacteria | 11639 |
| 50 | Ga0105238_10115239 | 3300009551 | Bacteria | 2667 |
| 51 | Ga0105238_10338522 | 3300009551 | Bacteria | 1492 |
| 52 | Ga0105249_10102146 | 3300009553 | Bacteria | 2698 |
| 53 | Ga0105239_10098667 | 3300010375 | Bacteria | 3229 |
| 54 | Ga0105246_10002224 | 3300011119 | Bacteria | 11707 |
| 55 | Ga0105246_10177450 | 3300011119 | Bacteria | 1637 |
| 56 | Ga0157370_10105138 | 3300013104 | Bacteria | 2642 |
| 57 | Ga0157369_10104824 | 3300013105 | Bacteria | 3011 |
| 58 | Ga0163162_10147121 | 3300013306 | Bacteria | 2472 |
| 59 | Ga0163162_10337809 | 3300013306 | Bacteria | 1639 |
| 60 | Ga0163162_10443663 | 3300013306 | Bacteria | 1430 |
| 61 | Ga0163163_10046173 | 3300014325 | Bacteria | 4278 |
| 62 | Ga0157380_10016476 | 3300014326 | Bacteria | 5452 |
| 63 | Ga0157377_10014129 | 3300014745 | Bacteria | 4057 |
| 64 | Ga0157379_10028829 | 3300014968 | Bacteria | 4937 |
| 65 | Ga0157376_10040114 | 3300014969 | Bacteria | 3824 |
| 66 | Ga0213873_10001749 | 3300021358 | Bacteria | 3649 |
| 67 | Ga0213876_10060729 | 3300021384 | Bacteria | 1994 |
| 68 | Ga0213875_10000079 | 3300021388 | Bacteria | 114698 |
| 69 | Ga0209051_1001150 | 3300025303 | Bacteria | 24066 |
| 70 | Ga0207647_10056429 | 3300025904 | Bacteria | 2410 |
| 71 | Ga0207685_10001722 | 3300025905 | Bacteria | 4743 |
| 72 | Ga0207699_10002485 | 3300025906 | Bacteria | 8701 |
| 73 | Ga0207699_10007451 | 3300025906 | Bacteria | 5355 |
| 74 | Ga0207693_10008472 | 3300025915 | Bacteria | 8414 |
| 75 | Ga0207693_10014464 | 3300025915 | Bacteria | 6344 |
| 76 | Ga0207663_10149464 | 3300025916 | Bacteria | 1637 |
| 77 | Ga0207646_10008909 | 3300025922 | Bacteria | 9993 |
| 78 | Ga0207687_10011099 | 3300025927 | Bacteria | 5889 |
| 79 | Ga0207700_10001709 | 3300025928 | Bacteria | 12466 |
| 80 | Ga0207700_10032098 | 3300025928 | Bacteria | 3741 |
| 81 | Ga0207664_10005714 | 3300025929 | Bacteria | 8502 |
| 82 | Ga0207664_10057423 | 3300025929 | Bacteria | 3093 |
| 83 | Ga0207669_10069273 | 3300025937 | Bacteria | 2207 |
| 84 | Ga0207665_10005165 | 3300025939 | Bacteria | 8719 |
| 85 | Ga0207665_10017634 | 3300025939 | Bacteria | 4691 |
| 86 | Ga0207689_10045995 | 3300025942 | Bacteria | 3608 |
| 87 | Ga0207667_10134734 | 3300025949 | Bacteria | 2544 |
| 88 | Ga0207658_10010166 | 3300025986 | Bacteria | 6397 |
| 89 | Ga0207677_10024004 | 3300026023 | Bacteria | 3779 |
| 90 | Ga0207703_10077433 | 3300026035 | Bacteria | 2760 |
| 91 | Ga0207639_10052720 | 3300026041 | Bacteria | 3101 |
| 92 | Ga0207702_10080078 | 3300026078 | Bacteria | 2833 |
| 93 | Ga0207641_10093418 | 3300026088 | Bacteria | 2637 |
| 94 | Ga0207683_10061365 | 3300026121 | Bacteria | 3309 |
| 95 | Ga0207698_10028244 | 3300026142 | Bacteria | 3998 |
| 96 | Ga0265327_10000062 | 3300031251 | Bacteria | 234320 |
| 97 | Ga0307513_10000199 | 3300031456 | Bacteria | 86429 |
| 98 | Ga0307513_10091462 | 3300031456 | Bacteria | 3101 |
| 99 | Ga0316575_10000585 | 3300031665 | Bacteria | 10709 |
| 100 | Ga0316576_10000047 | 3300031727 | Bacteria | 37553 |
| 101 | Ga0316576_10021492 | 3300031727 | Bacteria | 4465 |
| 102 | Ga0307410_10043098 | 3300031852 | Bacteria | 2988 |
| 103 | Ga0307407_10111422 | 3300031903 | Bacteria | 1718 |
| 104 | Ga0307409_100132663 | 3300031995 | Bacteria | 2132 |
| 105 | Ga0307409_100154573 | 3300031995 | Bacteria | 1997 |
| 106 | Ga0307416_100013605 | 3300032002 | Bacteria | 5539 |
| 107 | Ga0307416_100032892 | 3300032002 | Bacteria | 3925 |
| 108 | Ga0316583_10000602 | 3300032133 | Bacteria | 10931 |
| 109 | Ga0373959_0007394 | 3300034820 | Bacteria | 1845 |
| 110 | Ga0373928_0006326 | 3300035084 | Bacteria | 2277 |
| 111 | Ga0373951_0002797 | 3300035091 | Bacteria | 4353 |
| 112 | Ga0373932_0015599 | 3300035112 | Bacteria | 1927 |
| 113 | Ga0373939_0001875 | 3300035114 | Bacteria | 5024 |
| 114 | Ga0373939_0004538 | 3300035114 | Bacteria | 3287 |
| 115 | Ga0373961_0018019 | 3300035241 | Bacteria | 1839 |
| 116 | Ga0316574_0008948 | 3300035398 | Bacteria | 5591 |
| 117 | Ga0373931_0124726 | 3300035691 | Bacteria | 1475 |
| 118 | Ga0373935_0192793 | 3300035692 | Bacteria | 1404 |
| 119 | Ga0373933_0011217 | 3300035724 | Bacteria | 4932 |
| 120 | Ga0316584_0003256 | 3300036712 | Bacteria | 10504 |
| 121 | Ga0316581_0002831 | 3300037588 | Bacteria | 4232 |
| 122 | Ga0436364_0812095 | 3300037853 | Bacteria | 152428 |
| 123 | Ga0436364_1487665 | 3300037853 | Bacteria | 6653 |
| 124 | Ga0436365_1424412 | 3300039437 | Bacteria | 7308 |
| 125 | Ga0436363_0284700 | 3300039450 | Bacteria | 1528 |
| 126 | Ga0436362_0827280 | 3300039453 | Bacteria | 14089 |
| 127 | Ga0466965_0121030 | 3300044683 | Bacteria | 1352 |
| 128 | Ga0466966_0001654 | 3300044684 | Bacteria | 14373 |
| 129 | Ga0466966_0035348 | 3300044684 | Bacteria | 3228 |
| 130 | Ga0466961_0003392 | 3300044693 | Bacteria | 9947 |
| 131 | Ga0466961_0102590 | 3300044693 | Bacteria | 1801 |
| 132 | Ga0466963_0000014 | 3300044694 | Bacteria | 62519 |
| 133 | Ga0466963_0161097 | 3300044694 | Bacteria | 1561 |
| 134 | Ga0466963_0245873 | 3300044694 | Bacteria | 1255 |
| 135 | Ga0466971_0004385 | 3300044719 | Bacteria | 6087 |
| 136 | Ga0466971_0007378 | 3300044719 | Bacteria | 4787 |
| 137 | Ga0466968_0000636 | 3300044735 | Bacteria | 12022 |
| 138 | Ga0466968_0030144 | 3300044735 | Bacteria | 2246 |
| 139 | Ga0466970_0041950 | 3300044765 | Bacteria | 2433 |
| 140 | Ga0466957_0026225 | 3300044842 | Bacteria | 3457 |
| 141 | Ga0466959_0005771 | 3300045049 | Bacteria | 8522 |
| 142 | Ga0466959_0015545 | 3300045049 | Bacteria | 5547 |
| 143 | Ga0466958_0000257 | 3300045836 | Bacteria | 20547 |
| 144 | Ga0466958_0028970 | 3300045836 | Bacteria | 3285 |
| 145 | Ga0466958_0071979 | 3300045836 | Bacteria | 2117 |
| 146 | Ga0466967_0000044 | 3300045976 | Bacteria | 45237 |
| 147 | Ga0466967_0001053 | 3300045976 | Bacteria | 15187 |
| 148 | Ga0466967_0056779 | 3300045976 | Bacteria | 3454 |
| 149 | Ga0466967_0064386 | 3300045976 | Bacteria | 3260 |
| 150 | Ga0466967_0135844 | 3300045976 | Bacteria | 2287 |
| 151 | Ga0466967_0143861 | 3300045976 | Bacteria | 2223 |
| 152 | Ga0466967_0212854 | 3300045976 | Bacteria | 1834 |
| 153 | Ga0466967_0351246 | 3300045976 | Bacteria | 1427 |
| 154 | Ga0466967_0425278 | 3300045976 | Bacteria | 1295 |
| 155 | Ga0495592_0010367 | 3300046454 | Bacteria | 7029 |
| 156 | Ga0495651_0008313 | 3300046462 | Bacteria | 7952 |
| 157 | Ga0495653_0001916 | 3300046463 | Bacteria | 16400 |
| 158 | Ga0495650_0031554 | 3300046471 | Bacteria | 2382 |
| 159 | Ga0495580_0241889 | 3300046472 | Bacteria | 1237 |
| 160 | Ga0495608_0008626 | 3300046511 | Bacteria | 7137 |
| 161 | Ga0495628_0201704 | 3300046516 | Bacteria | 1498 |
| 162 | Ga0495652_0007778 | 3300046529 | Bacteria | 9847 |
| 163 | Ga0495640_0060511 | 3300046533 | Bacteria | 2575 |
| 164 | Ga0495587_0004107 | 3300046536 | Bacteria | 9633 |
| 165 | Ga0495667_0001290 | 3300046559 | Bacteria | 16417 |
| 166 | Ga0495634_0199095 | 3300046642 | Bacteria | 1245 |
| 167 | Ga0495635_0008641 | 3300046663 | Bacteria | 7110 |
| 168 | Ga0495635_0151388 | 3300046663 | Bacteria | 1579 |
| 169 | Ga0495657_0004735 | 3300046675 | Bacteria | 10841 |
| 170 | Ga0495599_0077846 | 3300046678 | Bacteria | 2070 |
| 171 | Ga0495646_0045747 | 3300046680 | Bacteria | 2671 |
| 172 | Ga0495600_0004802 | 3300046809 | Bacteria | 8112 |
| 173 | Ga0495604_0026879 | 3300047317 | Bacteria | 4579 |
| 174 | Ga0495674_0005647 | 3300047319 | Bacteria | 11980 |
| 175 | Ga0495680_0002183 | 3300047322 | Bacteria | 20250 |
| 176 | Ga0495675_0011443 | 3300047444 | Bacteria | 5570 |
| 177 | Ga0495684_0023021 | 3300047471 | Bacteria | 4791 |
| 178 | Ga0495602_0013482 | 3300048088 | Bacteria | 8353 |
| 179 | Ga0496100_0108643 | 3300048903 | Bacteria | 1924 |
| 180 | Ga0496101_0144754 | 3300048904 | Bacteria | 1814 |
| 181 | Ga0496101_0289588 | 3300048904 | Bacteria | 1281 |
| 182 | Ga0496102_0000072 | 3300048905 | Bacteria | 150284 |
| 183 | Ga0496102_0000233 | 3300048905 | Bacteria | 72853 |
| 184 | Ga0496102_0063741 | 3300048905 | Bacteria | 3375 |
| 185 | Ga0496102_0091357 | 3300048905 | Bacteria | 2818 |
| 186 | Ga0496103_0000158 | 3300048906 | Bacteria | 71302 |
| 187 | Ga0496104_0000398 | 3300048907 | Bacteria | 38090 |
| 188 | Ga0496104_0106121 | 3300048907 | Bacteria | 2692 |
| 189 | Ga0496104_0398876 | 3300048907 | Bacteria | 1288 |
| 190 | Ga0496105_0034520 | 3300048908 | Bacteria | 4160 |
| 191 | Ga0496105_0094540 | 3300048908 | Bacteria | 2468 |
| 192 | Ga0496106_0029378 | 3300048909 | Bacteria | 4096 |
| 193 | Ga0496107_0027145 | 3300048910 | Bacteria | 4065 |
| 194 | Ga0496108_0016420 | 3300048911 | Bacteria | 6038 |
| 195 | Ga0496109_0003659 | 3300048912 | Bacteria | 12848 |
| 196 | Ga0496110_0003842 | 3300048913 | Bacteria | 11569 |
| 197 | Ga0496110_0282326 | 3300048913 | Bacteria | 1512 |
| 198 | Ga0496111_0242272 | 3300048914 | Bacteria | 1339 |
| 199 | Ga0496112_0000555 | 3300048915 | Bacteria | 25563 |
| 200 | Ga0496113_0021913 | 3300048916 | Bacteria | 4512 |
| 201 | Ga0496115_0060142 | 3300048918 | Bacteria | 3060 |
| 202 | Ga0496118_0033326 | 3300048921 | Bacteria | 4228 |
| 203 | Ga0496123_0000510 | 3300048926 | Bacteria | 67563 |
| 204 | Ga0496124_0000205 | 3300048927 | Bacteria | 116897 |
| 205 | Ga0496125_0002017 | 3300048928 | Bacteria | 27504 |
| 206 | Ga0496126_0009139 | 3300048929 | Bacteria | 10576 |
| 207 | Ga0501031_0007128 | 3300049568 | Bacteria | 7297 |
| 208 | Ga0501039_0100432 | 3300049575 | Bacteria | 2258 |
| 209 | Ga0501042_0015655 | 3300049578 | Bacteria | 5193 |
| 210 | Ga0501047_0008538 | 3300049581 | Bacteria | 9663 |
| 211 | Ga0501047_0193117 | 3300049581 | Bacteria | 1899 |
| 212 | Ga0501067_0125754 | 3300049583 | Bacteria | 1427 |
| 213 | Ga0501070_0092216 | 3300049586 | Bacteria | 2507 |
| 214 | Ga0501083_0002799 | 3300049744 | Bacteria | 12048 |
| 215 | Ga0501035_0011262 | 3300049822 | Bacteria | 8287 |
| 216 | nmdc:mga06r32_410_c3 | 3300050510 | Bacteria | 11960 |
| 217 | nmdc:mga0n895_42137_c1 | 3300050512 | Bacteria | 4441 |
| 218 | nmdc:mga08x19_48456_c1 | 3300050514 | Bacteria | 2722 |
| 219 | nmdc:mga0a205_109559_c1 | 3300050515 | Bacteria | 2660 |
| 220 | nmdc:mga0a205_29759_c1 | 3300050515 | Bacteria | 5226 |
| 221 | nmdc:mga0a205_307033_c1 | 3300050515 | Bacteria | 1459 |
| 222 | Ga0495601_0024257 | 3300053077 | Bacteria | 3736 |
| 223 | Ga0500610_0082989 | 3300053079 | Bacteria | 1669 |
| 224 | Ga0495595_0011472 | 3300053084 | Bacteria | 3706 |
| 225 | Ga0501082_0139088 | 3300060353 | Bacteria | 2107 |
| 226 | Ga0466962_0000702 | 3300061719 | Bacteria | 14905 |
| 227 | Ga0466962_0032107 | 3300061719 | Bacteria | 2514 |
| 228 | Ga0466962_0064921 | 3300061719 | Bacteria | 1743 |
| 229 | 2558911953 | 2558860112 | Bacteria | 9931328 |
| 230 | 2623500212 | 2622736605 | Bacteria | 4992138 |
| 231 | 2644199243 | 2643221635 | Bacteria | 2632343 |
| 232 | 2644503836 | 2643221690 | Bacteria | 4654705 |
| 233 | 2812365215 | 2811994880 | Bacteria | 4147780 |
| 234 | 2816510473 | 2816332139 | Bacteria | 9138787 |
| 235 | 2857712973 | 2857710386 | Bacteria | 3186771 |
| 236 | 2870785234 | 2870782633 | Bacteria | 9624083 |
| 237 | 2884995540 | 2884994152 | Bacteria | 4492978 |
| 238 | 2891327193 | 2891326441 | Bacteria | 6439512 |
| 239 | 2932431940 | 2932431166 | Bacteria | 4215299 |
| 240 | Ga0496122_0000403 | |||
| 241 | Ga0070690_100062304 | |||
| 242 | Ga0068869_100054112 | |||
| 243 | Ga0070682_100076542 | |||
| 244 | Ga0068868_100022963 | |||
| 245 | Ga0068868_100022989 | |||
| 246 | Ga0068868_100247107 | |||
| 247 | Ga0070660_100126578 | |||
| 248 | Ga0070689_100042391 | |||
| 249 | Ga0070714_100037818 | |||
| 250 | Ga0070713_100001914 | |||
| 251 | Ga0070711_100003285 | |||
| 252 | Ga0070694_100093230 | |||
| 253 | Ga0070678_100110278 | |||
| 254 | Ga0070662_100117743 | |||
| 255 | Ga0070681_10062593 | |||
| 256 | Ga0070706_100163548 | |||
| 257 | Ga0070707_100013645 | |||
| 258 | Ga0070672_100075594 | |||
| 259 | Ga0070696_100190775 | |||
| 260 | Ga0068856_100015162 | |||
| 261 | Ga0068856_100063283 | |||
| 262 | Ga0068856_100111717 | |||
| 263 | Ga0068852_100008138 | |||
| 264 | Ga0068852_100229351 | |||
| 265 | Ga0068859_100084354 | |||
| 266 | Ga0068863_100101447 | |||
| 267 | Ga0068858_100012630 | |||
| 268 | Ga0068860_100328284 | |||
| 269 | Ga0081455_10002532 | |||
| 270 | Ga0081540_1015016 | |||
| 271 | Ga0070717_10004329 | |||
| 272 | Ga0070717_10194558 | |||
| 273 | Ga0070717_10313109 | |||
| 274 | Ga0075365_10012044 | |||
| 275 | Ga0070715_10000727 | |||
| 276 | Ga0070715_10023226 | |||
| 277 | Ga0070716_100010061 | |||
| 278 | Ga0070712_100152962 | |||
| 279 | Ga0070712_100216357 | |||
| 280 | Ga0075428_100053920 | |||
| 281 | Ga0075433_10026474 | |||
| 282 | Ga0075434_100144143 | |||
| 283 | Ga0075436_100041022 | |||
| 284 | Ga0097620_100084364 | |||
| 285 | Ga0075435_100091334 | |||
| 286 | Ga0105240_10056884 | |||
| 287 | Ga0105245_10056169 | |||
| 288 | Ga0105243_10004074 | |||
| 289 | Ga0105238_10115239 | |||
| 290 | Ga0105238_10338522 | |||
| 291 | Ga0105249_10102146 | |||
| 292 | Ga0105239_10098667 | |||
| 293 | Ga0105246_10002224 | |||
| 294 | Ga0105246_10177450 | |||
| 295 | Ga0157370_10105138 | |||
| 296 | Ga0157369_10104824 | |||
| 297 | Ga0163162_10147121 | |||
| 298 | Ga0163162_10337809 | |||
| 299 | Ga0163162_10443663 | |||
| 300 | Ga0163163_10046173 | |||
| 301 | Ga0157380_10016476 | |||
| 302 | Ga0157377_10014129 | |||
| 303 | Ga0157379_10028829 | |||
| 304 | Ga0157376_10040114 | |||
| 305 | Ga0213873_10001749 | |||
| 306 | Ga0213876_10060729 | |||
| 307 | Ga0213875_10000079 | |||
| 308 | Ga0209051_1001150 | |||
| 309 | Ga0207647_10056429 | |||
| 310 | Ga0207685_10001722 | |||
| 311 | Ga0207699_10002485 | |||
| 312 | Ga0207699_10007451 | |||
| 313 | Ga0207693_10008472 | |||
| 314 | Ga0207693_10014464 | |||
| 315 | Ga0207663_10149464 | |||
| 316 | Ga0207646_10008909 | |||
| 317 | Ga0207687_10011099 | |||
| 318 | Ga0207700_10001709 | |||
| 319 | Ga0207700_10032098 | |||
| 320 | Ga0207664_10005714 | |||
| 321 | Ga0207664_10057423 | |||
| 322 | Ga0207669_10069273 | |||
| 323 | Ga0207665_10005165 | |||
| 324 | Ga0207665_10017634 | |||
| 325 | Ga0207689_10045995 | |||
| 326 | Ga0207667_10134734 | |||
| 327 | Ga0207658_10010166 | |||
| 328 | Ga0207677_10024004 | |||
| 329 | Ga0207703_10077433 | |||
| 330 | Ga0207639_10052720 | |||
| 331 | Ga0207702_10080078 | |||
| 332 | Ga0207641_10093418 | |||
| 333 | Ga0207683_10061365 | |||
| 334 | Ga0207698_10028244 | |||
| 335 | Ga0265327_10000062 | |||
| 336 | Ga0307513_10000199 | |||
| 337 | Ga0307513_10091462 | |||
| 338 | Ga0316575_10000585 | |||
| 339 | Ga0316576_10000047 | |||
| 340 | Ga0316576_10021492 | |||
| 341 | Ga0307410_10043098 | |||
| 342 | Ga0307407_10111422 | |||
| 343 | Ga0307409_100132663 | |||
| 344 | Ga0307409_100154573 | |||
| 345 | Ga0307416_100013605 | |||
| 346 | Ga0307416_100032892 | |||
| 347 | Ga0316583_10000602 | |||
| 348 | Ga0373959_0007394 | |||
| 349 | Ga0373928_0006326 | |||
| 350 | Ga0373951_0002797 | |||
| 351 | Ga0373932_0015599 | |||
| 352 | Ga0373939_0001875 | |||
| 353 | Ga0373939_0004538 | |||
| 354 | Ga0373961_0018019 | |||
| 355 | Ga0316574_0008948 | |||
| 356 | Ga0373931_0124726 | |||
| 357 | Ga0373935_0192793 | |||
| 358 | Ga0373933_0011217 | |||
| 359 | Ga0316584_0003256 | |||
| 360 | Ga0316581_0002831 | |||
| 361 | Ga0436364_0812095 | |||
| 362 | Ga0436364_1487665 | |||
| 363 | Ga0436365_1424412 | |||
| 364 | Ga0436363_0284700 | |||
| 365 | Ga0436362_0827280 | |||
| 366 | Ga0466965_0121030 | |||
| 367 | Ga0466966_0001654 | |||
| 368 | Ga0466966_0035348 | |||
| 369 | Ga0466961_0003392 | |||
| 370 | Ga0466961_0102590 | |||
| 371 | Ga0466963_0000014 | |||
| 372 | Ga0466963_0161097 | |||
| 373 | Ga0466963_0245873 | |||
| 374 | Ga0466971_0004385 | |||
| 375 | Ga0466971_0007378 | |||
| 376 | Ga0466968_0000636 | |||
| 377 | Ga0466968_0030144 | |||
| 378 | Ga0466970_0041950 | |||
| 379 | Ga0466957_0026225 | |||
| 380 | Ga0466959_0005771 | |||
| 381 | Ga0466959_0015545 | |||
| 382 | Ga0466958_0000257 | |||
| 383 | Ga0466958_0028970 | |||
| 384 | Ga0466958_0071979 | |||
| 385 | Ga0466967_0000044 | |||
| 386 | Ga0466967_0001053 | |||
| 387 | Ga0466967_0056779 | |||
| 388 | Ga0466967_0064386 | |||
| 389 | Ga0466967_0135844 | |||
| 390 | Ga0466967_0143861 | |||
| 391 | Ga0466967_0212854 | |||
| 392 | Ga0466967_0351246 | |||
| 393 | Ga0466967_0425278 | |||
| 394 | Ga0495592_0010367 | |||
| 395 | Ga0495651_0008313 | |||
| 396 | Ga0495653_0001916 | |||
| 397 | Ga0495650_0031554 | |||
| 398 | Ga0495580_0241889 | |||
| 399 | Ga0495608_0008626 | |||
| 400 | Ga0495628_0201704 | |||
| 401 | Ga0495652_0007778 | |||
| 402 | Ga0495640_0060511 | |||
| 403 | Ga0495587_0004107 | |||
| 404 | Ga0495667_0001290 | |||
| 405 | Ga0495634_0199095 | |||
| 406 | Ga0495635_0008641 | |||
| 407 | Ga0495635_0151388 | |||
| 408 | Ga0495657_0004735 | |||
| 409 | Ga0495599_0077846 | |||
| 410 | Ga0495646_0045747 | |||
| 411 | Ga0495600_0004802 | |||
| 412 | Ga0495604_0026879 | |||
| 413 | Ga0495674_0005647 | |||
| 414 | Ga0495680_0002183 | |||
| 415 | Ga0495675_0011443 | |||
| 416 | Ga0495684_0023021 | |||
| 417 | Ga0495602_0013482 | |||
| 418 | Ga0496100_0108643 | |||
| 419 | Ga0496101_0144754 | |||
| 420 | Ga0496101_0289588 | |||
| 421 | Ga0496102_0000072 | |||
| 422 | Ga0496102_0000233 | |||
| 423 | Ga0496102_0063741 | |||
| 424 | Ga0496102_0091357 | |||
| 425 | Ga0496103_0000158 | |||
| 426 | Ga0496104_0000398 | |||
| 427 | Ga0496104_0106121 | |||
| 428 | Ga0496104_0398876 | |||
| 429 | Ga0496105_0034520 | |||
| 430 | Ga0496105_0094540 | |||
| 431 | Ga0496106_0029378 | |||
| 432 | Ga0496107_0027145 | |||
| 433 | Ga0496108_0016420 | |||
| 434 | Ga0496109_0003659 | |||
| 435 | Ga0496110_0003842 | |||
| 436 | Ga0496110_0282326 | |||
| 437 | Ga0496111_0242272 | |||
| 438 | Ga0496112_0000555 | |||
| 439 | Ga0496113_0021913 | |||
| 440 | Ga0496115_0060142 | |||
| 441 | Ga0496118_0033326 | |||
| 442 | Ga0496123_0000510 | |||
| 443 | Ga0496124_0000205 | |||
| 444 | Ga0496125_0002017 | |||
| 445 | Ga0496126_0009139 | |||
| 446 | Ga0501031_0007128 | |||
| 447 | Ga0501039_0100432 | |||
| 448 | Ga0501042_0015655 | |||
| 449 | Ga0501047_0008538 | |||
| 450 | Ga0501047_0193117 | |||
| 451 | Ga0501067_0125754 | |||
| 452 | Ga0501070_0092216 | |||
| 453 | Ga0501083_0002799 | |||
| 454 | Ga0501035_0011262 | |||
| 455 | nmdc:mga06r32_410_c3 | |||
| 456 | nmdc:mga0n895_42137_c1 | |||
| 457 | nmdc:mga08x19_48456_c1 | |||
| 458 | nmdc:mga0a205_109559_c1 | |||
| 459 | nmdc:mga0a205_29759_c1 | |||
| 460 | nmdc:mga0a205_307033_c1 | |||
| 461 | Ga0495601_0024257 | |||
| 462 | Ga0500610_0082989 | |||
| 463 | Ga0495595_0011472 | |||
| 464 | Ga0501082_0139088 | |||
| 465 | Ga0466962_0000702 | |||
| 466 | Ga0466962_0032107 | |||
| 467 | Ga0466962_0064921 | |||
| 468 | 2558911953 | |||
| 469 | 2623500212 | |||
| 470 | 2644199243 | |||
| 471 | 2644503836 | |||
| 472 | 2812365215 | |||
| 473 | 2816510473 | |||
| 474 | 2857712973 | |||
| 475 | 2870785234 | |||
| 476 | 2884995540 | |||
| 477 | 2891327193 | |||
| 478 | 2932431940 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2qhf-assembly1.cif.gz_A | mycobacterium tuberculosis chorismate synthase in complex with nca | 0.9646 | 1 | 390 |
| 2o11-assembly1.cif.gz_A | mycobacterium tuberculosis chorismate synthase | 0.964 | 1 | 390 |
| 4bai-assembly1.cif.gz_A | mycobacterium tuberculosis chorismate synthase before exposure to 266 nm uv laser | 0.9632 | 1 | 390 |
| 2o11-assembly1.cif.gz_A | mycobacterium tuberculosis chorismate synthase | 0.9615 | 1 | 390 |
| 4baj-assembly1.cif.gz_A | mycobacterium tuberculosis chorismate synthase after exposure to 266nm uv laser | 0.9613 | 2 | 390 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4bajA00 | Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC | 0.9565 | 2 | 390 | 3.60.150.10 |
| 4bajA00 | Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC | 0.9539 | 2 | 390 | 3.60.150.10 |
| 4ecdB00 | Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC | 0.9484 | 1 | 385 | 3.60.150.10 |
| 4ecdB00 | Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC | 0.9415 | 1 | 385 | 3.60.150.10 |
| 5z9aA00 | Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC | 0.9322 | 2 | 370 | 3.60.150.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-W4U0H2-F1-model_v4 | deleted | 0.9775 | 148 | 285 |
|
| AF-A0A0F0HGV6-F1-model_v4 | chorismate synthase (EC 4.2.3.5) | 0.9747 | 55 | 249 |
GO:0004107
GO:0005829 GO:0008652 GO:0009073 GO:0009423 GO:0010181 |
| AF-A0A6I3BM75-F1-model_v4 | Chorismate synthase (EC 4.2.3.5) | 0.9736 | 1 | 264 |
GO:0004107
GO:0005829 GO:0008652 GO:0009073 GO:0009423 GO:0010181 |
| AF-A0A421B0T5-F1-model_v4 | Chorismate synthase (CS) (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase) | 0.9732 | 2 | 390 |
GO:0004107
GO:0005829 GO:0008652 GO:0009073 GO:0009423 GO:0010181 |
| AF-A0A1N6BAZ6-F1-model_v4 | Chorismate synthase (CS) (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase) | 0.973 | 1 | 387 |
GO:0004107
GO:0005829 GO:0008652 GO:0009073 GO:0009423 GO:0010181 |