F351982

General Info

Members Datasets Scaffolds Average Seq Length
239 156 478 355

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10000006|Ga0213875_10000006149
Length 402
Sequence MKSPYIGSLAPNEVVTAQFLVLSKEVRHKRTGEPYLTLHLGDRTGDMEAKMWDNVTEVMDTFERDDFVKVKGILQLYQNRTQFTVHKLRRLEEHEVDFADYFPCSERDPEEMFGELRAIIAGMADWRLRALLEGIFSDPRVVSLYKAAPAAKTIHHACRGGLLEHVLSLCALCRAAVSHYAASNYKDIDLDLLLAGAILHDIGKLEELSYGRSFGYSPDGQLLGHIVIGLRMVGSKVEQIDGFPLKLRTLLEHMIISHHGELEFGSPKVPIFPEALLLHHLDNLDSKMDTMRHALNREPLVDSEFTGWVAPLERVLLRKQRYLRGEALVPKPETRAVEGETENGALVTDDPRKAASSPAPAQSTAHPTPEARPAAIEKRAENRPAPTTLFGEKLQAVLGLEK

Samples

Sample ID Description Type Environment
1 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
2 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
60 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
61 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
62 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
63 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
97 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
98 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
99 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
100 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
101 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
102 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
103 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
104 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
105 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
108 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
117 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
118 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
140 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
141 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
147 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0.42
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.84
Rhizosphere 88.7
Stem 0
Stem Tuber 0
Unclassified 8.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213875_10000006 3300021388 Bacteria 579005
2 Ga0058862_12843983 3300004803 Bacteria 2490
3 Ga0070658_10010815 3300005327 Bacteria 7315
4 Ga0070683_100001187 3300005329 Bacteria 19785
5 Ga0070683_100188635 3300005329 Bacteria 1957
6 Ga0070670_100241659 3300005331 Bacteria 1572
7 Ga0070680_100103169 3300005336 Bacteria 2369
8 Ga0068868_100137718 3300005338 Bacteria 2002
9 Ga0070689_100026332 3300005340 Bacteria 4378
10 Ga0070691_10015674 3300005341 Bacteria 3482
11 Ga0070661_100017800 3300005344 Bacteria 5044
12 Ga0070692_10026740 3300005345 Bacteria 2855
13 Ga0070659_100013719 3300005366 Bacteria 6040
14 Ga0070659_100086455 3300005366 Bacteria 2509
15 Ga0070659_100088731 3300005366 Unclassified 2477
16 Ga0070709_10067007 3300005434 Unclassified 2304
17 Ga0070713_100000816 3300005436 Bacteria 20007
18 Ga0070713_100029056 3300005436 Bacteria 4372
19 Ga0070663_100031840 3300005455 Bacteria 3628
20 Ga0070678_100135836 3300005456 Bacteria 1961
21 Ga0070662_100012911 3300005457 Bacteria 5550
22 Ga0070681_10000569 3300005458 Bacteria 30428
23 Ga0070681_10005310 3300005458 Bacteria 12436
24 Ga0070681_10166102 3300005458 Bacteria 2130
25 Ga0070679_100001502 3300005530 Bacteria 20727
26 Ga0070679_100008586 3300005530 Bacteria 9629
27 Ga0070684_100014602 3300005535 Bacteria 6368
28 Ga0070684_100230160 3300005535 Bacteria 1692
29 Ga0068853_100021798 3300005539 Bacteria 5345
30 Ga0070686_100115861 3300005544 Bacteria 1833
31 Ga0070695_100033781 3300005545 Bacteria 3202
32 Ga0070665_100243193 3300005548 Bacteria 1800
33 Ga0070665_100306405 3300005548 Unclassified 1592
34 Ga0068855_100013867 3300005563 Bacteria 9718
35 Ga0068855_100022164 3300005563 Bacteria 7611
36 Ga0068855_100023314 3300005563 Bacteria 7413
37 Ga0068855_100080014 3300005563 Bacteria 3789
38 Ga0070664_100044081 3300005564 Bacteria 3766
39 Ga0068857_100001968 3300005577 Bacteria 16610
40 Ga0068854_100073165 3300005578 Bacteria 2511
41 Ga0068856_100001755 3300005614 Bacteria 22674
42 Ga0068856_100023256 3300005614 Bacteria 6026
43 Ga0068856_100024598 3300005614 Bacteria 5862
44 Ga0068856_100047881 3300005614 Bacteria 4213
45 Ga0068852_100052388 3300005616 Bacteria 3507
46 Ga0068858_100143197 3300005842 Unclassified 2245
47 Ga0070717_10002642 3300006028 Bacteria 12624
48 Ga0097621_100018965 3300006237 Bacteria 5272
49 Ga0097621_100064311 3300006237 Bacteria 3017
50 Ga0068871_100005713 3300006358 Bacteria 8733
51 Ga0068871_100377407 3300006358 Unclassified 1259
52 Ga0075430_100009453 3300006846 Bacteria 8238
53 Ga0075431_100079287 3300006847 Bacteria 3389
54 Ga0075436_100158511 3300006914 Bacteria 1595
55 Ga0105240_10002688 3300009093 Bacteria 28316
56 Ga0105240_10024362 3300009093 Bacteria 7978
57 Ga0105240_10111811 3300009093 Unclassified 3303
58 Ga0105240_10125924 3300009093 Bacteria 3078
59 Ga0105245_10005529 3300009098 Bacteria 11099
60 Ga0105245_10079708 3300009098 Bacteria 2990
61 Ga0114129_10112409 3300009147 Unclassified 3756
62 Ga0105243_10013736 3300009148 Bacteria 6127
63 Ga0105241_10002235 3300009174 Bacteria 14555
64 Ga0105242_10052109 3300009176 Bacteria 3338
65 Ga0105242_10109965 3300009176 Bacteria 2347
66 Ga0105248_10002427 3300009177 Bacteria 20684
67 Ga0105248_10629871 3300009177 Unclassified 1210
68 Ga0105237_10002749 3300009545 Bacteria 21438
69 Ga0105237_10011618 3300009545 Bacteria 9318
70 Ga0105237_10056558 3300009545 Bacteria 3926
71 Ga0105238_10000748 3300009551 Bacteria 33846
72 Ga0105238_10053286 3300009551 Unclassified 4065
73 Ga0105238_10201799 3300009551 Unclassified 1964
74 Ga0105249_10013621 3300009553 Bacteria 7180
75 Ga0105239_10020893 3300010375 Bacteria 7223
76 Ga0105239_10030581 3300010375 Bacteria 5921
77 Ga0157373_10055756 3300013100 Bacteria 2807
78 Ga0157373_10225103 3300013100 Bacteria 1324
79 Ga0157370_10019490 3300013104 Bacteria 6803
80 Ga0157369_10002292 3300013105 Bacteria 23011
81 Ga0157369_10002412 3300013105 Bacteria 22451
82 Ga0157369_10077567 3300013105 Bacteria 3561
83 Ga0157378_10048106 3300013297 Bacteria 3792
84 Ga0157372_10042073 3300013307 Bacteria 5052
85 Ga0157372_10077403 3300013307 Bacteria 3757
86 Ga0157372_10286941 3300013307 Bacteria 1914
87 Ga0157375_10448600 3300013308 Bacteria 1456
88 Ga0163163_10131062 3300014325 Bacteria 2547
89 Ga0163163_10288475 3300014325 Bacteria 1693
90 Ga0157380_10149554 3300014326 Bacteria 2017
91 Ga0157380_10167766 3300014326 Bacteria 1915
92 Ga0157379_10042566 3300014968 Bacteria 4055
93 Ga0157376_10015634 3300014969 Bacteria 5739
94 Ga0213873_10000623 3300021358 Bacteria 5783
95 Ga0213872_10000138 3300021361 Bacteria 65490
96 Ga0213874_10013207 3300021377 Bacteria 2134
97 Ga0213876_10007627 3300021384 Bacteria 5875
98 Ga0213876_10014931 3300021384 Bacteria 4117
99 Ga0213875_10000032 3300021388 Bacteria 172918
100 Ga0213875_10003231 3300021388 Bacteria 9357
101 Ga0213875_10003714 3300021388 Bacteria 8602
102 Ga0213875_10013285 3300021388 Bacteria 4048
103 Ga0213875_10029600 3300021388 Bacteria 2597
104 Ga0213871_10011442 3300021441 Bacteria 2038
105 Ga0207699_10171922 3300025906 Unclassified 1450
106 Ga0207705_10008912 3300025909 Bacteria 7306
107 Ga0207654_10012200 3300025911 Bacteria 4399
108 Ga0207707_10012837 3300025912 Bacteria 7288
109 Ga0207707_10131983 3300025912 Bacteria 2184
110 Ga0207695_10000597 3300025913 Bacteria 72390
111 Ga0207695_10011427 3300025913 Bacteria 10757
112 Ga0207695_10151856 3300025913 Unclassified 2255
113 Ga0207671_10329460 3300025914 Bacteria 1209
114 Ga0207663_10042079 3300025916 Bacteria 2789
115 Ga0207660_10006515 3300025917 Bacteria 7574
116 Ga0207649_10052290 3300025920 Bacteria 2534
117 Ga0207652_10051631 3300025921 Bacteria 3526
118 Ga0207694_10000375 3300025924 Bacteria 41549
119 Ga0207694_10034739 3300025924 Bacteria 3867
120 Ga0207687_10009040 3300025927 Bacteria 6512
121 Ga0207700_10001351 3300025928 Bacteria 13904
122 Ga0207706_10010093 3300025933 Bacteria 8648
123 Ga0207686_10003448 3300025934 Bacteria 8492
124 Ga0207686_10026395 3300025934 Bacteria 3387
125 Ga0207686_10029922 3300025934 Bacteria 3218
126 Ga0207686_10108672 3300025934 Bacteria 1866
127 Ga0207709_10031914 3300025935 Unclassified 3081
128 Ga0207670_10021623 3300025936 Bacteria 3973
129 Ga0207711_10011020 3300025941 Bacteria 7511
130 Ga0207661_10009145 3300025944 Bacteria 7103
131 Ga0207661_10078958 3300025944 Bacteria 2711
132 Ga0207667_10001346 3300025949 Bacteria 30841
133 Ga0207667_10010408 3300025949 Bacteria 10874
134 Ga0207667_10175451 3300025949 Bacteria 2202
135 Ga0207651_10081218 3300025960 Bacteria 2336
136 Ga0207712_10158639 3300025961 Bacteria 1755
137 Ga0207640_10046432 3300025981 Bacteria 2795
138 Ga0207703_10133435 3300026035 Bacteria 2147
139 Ga0207703_10184968 3300026035 Bacteria 1841
140 Ga0207703_10185700 3300026035 Bacteria 1838
141 Ga0207639_10144331 3300026041 Unclassified 1987
142 Ga0207678_10005572 3300026067 Bacteria 11257
143 Ga0207702_10014734 3300026078 Bacteria 6485
144 Ga0207702_10143079 3300026078 Bacteria 2167
145 Ga0207702_10164488 3300026078 Unclassified 2028
146 Ga0207674_10000544 3300026116 Bacteria 49416
147 Ga0207683_10073846 3300026121 Bacteria 3017
148 Ga0207698_10005116 3300026142 Bacteria 8059
149 Ga0207698_10159831 3300026142 Bacteria 1969
150 Ga0268264_10083592 3300028381 Unclassified 2735
151 Ga0265338_10125230 3300028800 Bacteria 2040
152 Ga0265332_10018242 3300031238 Bacteria 3096
153 Ga0265320_10034511 3300031240 Bacteria 2572
154 Ga0265329_10019355 3300031242 Bacteria 2313
155 Ga0265340_10060889 3300031247 Bacteria 1807
156 Ga0265331_10072247 3300031250 Bacteria 1612
157 Ga0265314_10003252 3300031711 Bacteria 15884
158 Ga0373934_0005768 3300035086 Bacteria 4588
159 Ga0373934_0018860 3300035086 Bacteria 2643
160 Ga0373954_0010423 3300035118 Bacteria 4102
161 Ga0373954_0033382 3300035118 Unclassified 2382
162 Ga0373956_0022831 3300035119 Bacteria 2681
163 Ga0373957_0100640 3300035120 Bacteria 1157
164 Ga0373935_0044312 3300035692 Bacteria 2803
165 Ga0373935_0195052 3300035692 Bacteria 1397
166 Ga0373927_0001332 3300035695 Bacteria 18620
167 Ga0373947_0011450 3300035725 Bacteria 5089
168 Ga0373947_0073870 3300035725 Bacteria 2097
169 Ga0373937_0009203 3300036401 Bacteria 8575
170 Ga0373937_0010662 3300036401 Bacteria 8036
171 Ga0373937_0057937 3300036401 Bacteria 3559
172 Ga0373925_0022340 3300037068 Bacteria 4614
173 Ga0373925_0055126 3300037068 Bacteria 2975
174 Ga0395905_0135888 3300037471 Unclassified 2313
175 Ga0436364_0403604 3300037853 Bacteria 63400
176 Ga0436364_0466584 3300037853 Bacteria 6837
177 Ga0436364_0468316 3300037853 Bacteria 11922
178 Ga0436364_0478514 3300037853 Bacteria 578677
179 Ga0436364_0566872 3300037853 Bacteria 7425
180 Ga0436364_0599273 3300037853 Bacteria 2915
181 Ga0436364_0752932 3300037853 Bacteria 2509
182 Ga0436364_1105375 3300037853 Bacteria 139847
183 Ga0436364_1327229 3300037853 Bacteria 2530
184 Ga0436364_1498638 3300037853 Bacteria 2386
185 Ga0436365_0161433 3300039437 Bacteria 13949
186 Ga0436365_0613304 3300039437 Bacteria 5993
187 Ga0436365_1344604 3300039437 Bacteria 1615
188 Ga0436360_0140312 3300039438 Bacteria 1973
189 Ga0436360_0477583 3300039438 Bacteria 47726
190 Ga0436361_0444282 3300039447 Bacteria 5811
191 Ga0436361_1089336 3300039447 Bacteria 150546
192 Ga0436363_0246336 3300039450 Bacteria 8811
193 Ga0436363_0480496 3300039450 Bacteria 5735
194 Ga0436363_1458645 3300039450 Unclassified 1253
195 Ga0436362_0237498 3300039453 Bacteria 1511
196 Ga0436362_1208510 3300039453 Bacteria 9192
197 Ga0495580_0010127 3300046472 Bacteria 7365
198 Ga0495580_0092498 3300046472 Bacteria 2105
199 Ga0495580_0151787 3300046472 Unclassified 1605
200 Ga0495652_0012689 3300046529 Bacteria 7591
201 Ga0495636_0037404 3300047318 Bacteria 2005
202 Ga0495674_0236872 3300047319 Bacteria 1505
203 Ga0495680_0182480 3300047322 Bacteria 1514
204 Ga0495684_0023102 3300047471 Bacteria 4783
205 Ga0495602_0018739 3300048088 Bacteria 6899
206 Ga0496112_0011140 3300048915 Bacteria 8199
207 Ga0496115_0134333 3300048918 Bacteria 2040
208 Ga0501031_0005492 3300049568 Bacteria 8250
209 Ga0501032_0001821 3300049569 Bacteria 16847
210 Ga0501033_0011659 3300049570 Bacteria 6722
211 Ga0501034_0008364 3300049571 Bacteria 10941
212 Ga0501036_0000814 3300049572 Bacteria 23171
213 Ga0501037_0004060 3300049573 Bacteria 10616
214 Ga0501038_0005231 3300049574 Bacteria 12062
215 Ga0501039_0004429 3300049575 Bacteria 10603
216 Ga0501043_0013883 3300049579 Bacteria 6302
217 Ga0501046_0000783 3300049580 Bacteria 30741
218 Ga0501047_0040200 3300049581 Bacteria 4523
219 Ga0501048_0004771 3300049582 Bacteria 10329
220 Ga0501067_0003265 3300049583 Bacteria 8929
221 Ga0501068_0000562 3300049584 Bacteria 18872
222 Ga0501069_0000891 3300049585 Bacteria 14251
223 Ga0501070_0055760 3300049586 Bacteria 3275
224 Ga0501072_0026652 3300049588 Bacteria 4506
225 Ga0501073_0000325 3300049589 Bacteria 31963
226 Ga0501074_0000567 3300049590 Bacteria 22887
227 Ga0501076_0002529 3300049592 Bacteria 12587
228 Ga0501079_0005643 3300049741 Bacteria 9339
229 Ga0501080_0000021 3300049742 Bacteria 91749
230 Ga0501083_0025460 3300049744 Bacteria 4096
231 Ga0501035_0011574 3300049822 Bacteria 8178
232 Ga0501044_0000712 3300049823 Bacteria 40091
233 Ga0501044_0026961 3300049823 Bacteria 6079
234 Ga0501044_0045456 3300049823 Bacteria 4548
235 nmdc:mga0qj67_7293_c1 3300050509 Bacteria 8172
236 nmdc:mga06r32_252902_c1 3300050510 Bacteria 1750
237 nmdc:mga08x19_61190_c1 3300050514 Bacteria 2439
238 Ga0501084_0000522 3300054114 Bacteria 29401
239 Ga0501082_0003396 3300060353 Bacteria 13899
240 Ga0213875_10000006
241 Ga0058862_12843983
242 Ga0070658_10010815
243 Ga0070683_100001187
244 Ga0070683_100188635
245 Ga0070670_100241659
246 Ga0070680_100103169
247 Ga0068868_100137718
248 Ga0070689_100026332
249 Ga0070691_10015674
250 Ga0070661_100017800
251 Ga0070692_10026740
252 Ga0070659_100013719
253 Ga0070659_100086455
254 Ga0070659_100088731
255 Ga0070709_10067007
256 Ga0070713_100000816
257 Ga0070713_100029056
258 Ga0070663_100031840
259 Ga0070678_100135836
260 Ga0070662_100012911
261 Ga0070681_10000569
262 Ga0070681_10005310
263 Ga0070681_10166102
264 Ga0070679_100001502
265 Ga0070679_100008586
266 Ga0070684_100014602
267 Ga0070684_100230160
268 Ga0068853_100021798
269 Ga0070686_100115861
270 Ga0070695_100033781
271 Ga0070665_100243193
272 Ga0070665_100306405
273 Ga0068855_100013867
274 Ga0068855_100022164
275 Ga0068855_100023314
276 Ga0068855_100080014
277 Ga0070664_100044081
278 Ga0068857_100001968
279 Ga0068854_100073165
280 Ga0068856_100001755
281 Ga0068856_100023256
282 Ga0068856_100024598
283 Ga0068856_100047881
284 Ga0068852_100052388
285 Ga0068858_100143197
286 Ga0070717_10002642
287 Ga0097621_100018965
288 Ga0097621_100064311
289 Ga0068871_100005713
290 Ga0068871_100377407
291 Ga0075430_100009453
292 Ga0075431_100079287
293 Ga0075436_100158511
294 Ga0105240_10002688
295 Ga0105240_10024362
296 Ga0105240_10111811
297 Ga0105240_10125924
298 Ga0105245_10005529
299 Ga0105245_10079708
300 Ga0114129_10112409
301 Ga0105243_10013736
302 Ga0105241_10002235
303 Ga0105242_10052109
304 Ga0105242_10109965
305 Ga0105248_10002427
306 Ga0105248_10629871
307 Ga0105237_10002749
308 Ga0105237_10011618
309 Ga0105237_10056558
310 Ga0105238_10000748
311 Ga0105238_10053286
312 Ga0105238_10201799
313 Ga0105249_10013621
314 Ga0105239_10020893
315 Ga0105239_10030581
316 Ga0157373_10055756
317 Ga0157373_10225103
318 Ga0157370_10019490
319 Ga0157369_10002292
320 Ga0157369_10002412
321 Ga0157369_10077567
322 Ga0157378_10048106
323 Ga0157372_10042073
324 Ga0157372_10077403
325 Ga0157372_10286941
326 Ga0157375_10448600
327 Ga0163163_10131062
328 Ga0163163_10288475
329 Ga0157380_10149554
330 Ga0157380_10167766
331 Ga0157379_10042566
332 Ga0157376_10015634
333 Ga0213873_10000623
334 Ga0213872_10000138
335 Ga0213874_10013207
336 Ga0213876_10007627
337 Ga0213876_10014931
338 Ga0213875_10000032
339 Ga0213875_10003231
340 Ga0213875_10003714
341 Ga0213875_10013285
342 Ga0213875_10029600
343 Ga0213871_10011442
344 Ga0207699_10171922
345 Ga0207705_10008912
346 Ga0207654_10012200
347 Ga0207707_10012837
348 Ga0207707_10131983
349 Ga0207695_10000597
350 Ga0207695_10011427
351 Ga0207695_10151856
352 Ga0207671_10329460
353 Ga0207663_10042079
354 Ga0207660_10006515
355 Ga0207649_10052290
356 Ga0207652_10051631
357 Ga0207694_10000375
358 Ga0207694_10034739
359 Ga0207687_10009040
360 Ga0207700_10001351
361 Ga0207706_10010093
362 Ga0207686_10003448
363 Ga0207686_10026395
364 Ga0207686_10029922
365 Ga0207686_10108672
366 Ga0207709_10031914
367 Ga0207670_10021623
368 Ga0207711_10011020
369 Ga0207661_10009145
370 Ga0207661_10078958
371 Ga0207667_10001346
372 Ga0207667_10010408
373 Ga0207667_10175451
374 Ga0207651_10081218
375 Ga0207712_10158639
376 Ga0207640_10046432
377 Ga0207703_10133435
378 Ga0207703_10184968
379 Ga0207703_10185700
380 Ga0207639_10144331
381 Ga0207678_10005572
382 Ga0207702_10014734
383 Ga0207702_10143079
384 Ga0207702_10164488
385 Ga0207674_10000544
386 Ga0207683_10073846
387 Ga0207698_10005116
388 Ga0207698_10159831
389 Ga0268264_10083592
390 Ga0265338_10125230
391 Ga0265332_10018242
392 Ga0265320_10034511
393 Ga0265329_10019355
394 Ga0265340_10060889
395 Ga0265331_10072247
396 Ga0265314_10003252
397 Ga0373934_0005768
398 Ga0373934_0018860
399 Ga0373954_0010423
400 Ga0373954_0033382
401 Ga0373956_0022831
402 Ga0373957_0100640
403 Ga0373935_0044312
404 Ga0373935_0195052
405 Ga0373927_0001332
406 Ga0373947_0011450
407 Ga0373947_0073870
408 Ga0373937_0009203
409 Ga0373937_0010662
410 Ga0373937_0057937
411 Ga0373925_0022340
412 Ga0373925_0055126
413 Ga0395905_0135888
414 Ga0436364_0403604
415 Ga0436364_0466584
416 Ga0436364_0468316
417 Ga0436364_0478514
418 Ga0436364_0566872
419 Ga0436364_0599273
420 Ga0436364_0752932
421 Ga0436364_1105375
422 Ga0436364_1327229
423 Ga0436364_1498638
424 Ga0436365_0161433
425 Ga0436365_0613304
426 Ga0436365_1344604
427 Ga0436360_0140312
428 Ga0436360_0477583
429 Ga0436361_0444282
430 Ga0436361_1089336
431 Ga0436363_0246336
432 Ga0436363_0480496
433 Ga0436363_1458645
434 Ga0436362_0237498
435 Ga0436362_1208510
436 Ga0495580_0010127
437 Ga0495580_0092498
438 Ga0495580_0151787
439 Ga0495652_0012689
440 Ga0495636_0037404
441 Ga0495674_0236872
442 Ga0495680_0182480
443 Ga0495684_0023102
444 Ga0495602_0018739
445 Ga0496112_0011140
446 Ga0496115_0134333
447 Ga0501031_0005492
448 Ga0501032_0001821
449 Ga0501033_0011659
450 Ga0501034_0008364
451 Ga0501036_0000814
452 Ga0501037_0004060
453 Ga0501038_0005231
454 Ga0501039_0004429
455 Ga0501043_0013883
456 Ga0501046_0000783
457 Ga0501047_0040200
458 Ga0501048_0004771
459 Ga0501067_0003265
460 Ga0501068_0000562
461 Ga0501069_0000891
462 Ga0501070_0055760
463 Ga0501072_0026652
464 Ga0501073_0000325
465 Ga0501074_0000567
466 Ga0501076_0002529
467 Ga0501079_0005643
468 Ga0501080_0000021
469 Ga0501083_0025460
470 Ga0501035_0011574
471 Ga0501044_0000712
472 Ga0501044_0026961
473 Ga0501044_0045456
474 nmdc:mga0qj67_7293_c1
475 nmdc:mga06r32_252902_c1
476 nmdc:mga08x19_61190_c1
477 Ga0501084_0000522
478 Ga0501082_0003396

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01336

tRNA_anti-codon

OB-fold nucleic acid binding domain

20

91

0.93

PF01966

HD

HD domain

162

287

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e0e-assembly1.cif.gz_A crystal structure of a domain of replication protein a from methanococcus maripaludis. northeast structural genomics targe mrr110b 0.8676 3 91
3f2b-assembly1.cif.gz_A dna polymerase polc from geobacillus kaustophilus complex with dna, dgtp, mg and zn 0.8616 9 96
3f2d-assembly1.cif.gz_A dna polymerase polc from geobacillus kaustophilus complex with dna, dgtp, mn and zn 0.8615 4 97
1quq-assembly2.cif.gz_C complex of replication protein a subunits rpa14 and rpa32 0.8601 14 95
1quq-assembly3.cif.gz_A complex of replication protein a subunits rpa14 and rpa32 0.8574 14 95
ID Description Score Start End Superfamily
af_Q2G2T1_122_299_1.10.3210.10 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.9476 123 302 1.10.3210.10
af_Q2G2T1_122_299_1.10.3210.10 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.9271 123 302 1.10.3210.10
af_Q2G2T1_22_97_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9099 25 97 2.40.50.140
af_Q9F1K0_916_986_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9018 22 91 2.40.50.140
af_Q6YZ49_4_118_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8921 18 92 2.40.50.140
ID Description Score Start End GO Terms
AF-X1B8B7-F1-model_v4 HD/PDEase domain-containing protein 0.975 143 283 GO:0016787
GO:0031125
AF-A0A6V8PHM7-F1-model_v4 3'-5' exoribonuclease 0.9676 102 268 GO:0016787
GO:0031125
AF-A0A7V6YE78-F1-model_v4 CRISPR-associated endonuclease Cas3 0.9672 110 312 GO:0004519
GO:0031125
AF-A0A1V4QDU9-F1-model_v4 HD/PDEase domain-containing protein 0.9669 114 313 GO:0016787
GO:0031125
AF-A0A7X9H318-F1-model_v4 HD domain-containing protein 0.9665 134 293 GO:0016787
GO:0031125

Map