F351508

General Info

Members Datasets Scaffolds Average Seq Length
238 206 476 168

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8055172936|8055175606
Length 191
Sequence ADGVLCLTGLPAPACFLSDRTLRMTTERISPPLIGGEREMLRSFLDFHRATLAMKCDGLSEEDLRRRSMPPSTLSLLGLVRHMAEVERTWFRRVINGEDIPLVWSDEGDYQVAYDASGAKRSEAFDAWQTEVQHARRIEREAESLDVVRHNARWGEDVSLRLVMLHLIHEYARHNGHADFLREGIDGTTGA

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
87 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
88 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
89 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
90 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
91 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
92 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
93 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
94 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
95 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
96 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
97 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
98 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
101 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
102 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
103 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
104 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
107 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
108 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
109 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
112 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
113 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
114 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
115 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
116 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
121 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
122 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
125 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
126 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
129 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
134 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
135 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
136 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
151 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
152 3300053113 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 endosphere Metagenome Endosphere
153 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
154 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
155 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
156 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
157 2501939600 Micromonospora sp. L5 Isolate Unclassified
158 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
159 2558860280 Kutzneria sp. 744 Isolate Unclassified
160 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
161 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
162 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
163 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
164 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
165 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
166 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
167 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
168 2855683550 Micromonospora sp. RP3T Isolate Unclassified
169 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
170 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
171 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
172 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
173 2858868258 Micromonospora sp. MH33 Isolate Unclassified
174 2858882152 Micromonospora noduli MED15 Isolate Nodule
175 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
176 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
177 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
178 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
179 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
180 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
181 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
182 2867475112 Streptomyces sp. TM32 Isolate Unclassified
183 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
184 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
185 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
186 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
187 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
188 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
189 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
190 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
191 2891562705 Microbispora tritici MT50 Isolate Unclassified
192 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
193 2902582711 Micromonospora sp. AP08 Isolate Unclassified
194 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
195 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
196 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
197 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
198 649633069 Micromonospora sp. L5 Isolate Unclassified
199 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
200 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
201 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
202 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
203 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
204 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
205 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
206 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.15
Metatranscriptomes 0.42
Isolates 21.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.2
Nodule 1.68
Rhizoplane 0.84
Rhizosphere 75.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10057239 3300003203 Bacteria 1275
2 rootH2_10227900 3300003320 Bacteria 4849
3 rootL2_10051785 3300003322 Bacteria 4507
4 JGI25405J52794_10044012 3300003911 Bacteria 948
5 Ga0068869_100018914 3300005334 Bacteria 4697
6 Ga0070680_101038102 3300005336 Bacteria 708
7 Ga0068868_100005342 3300005338 Bacteria 9018
8 Ga0070660_100334472 3300005339 Bacteria 1245
9 Ga0070692_11070835 3300005345 Bacteria 568
10 Ga0070668_100001166 3300005347 Bacteria 18577
11 Ga0070668_100063829 3300005347 Bacteria 2855
12 Ga0070668_101520065 3300005347 Bacteria 612
13 Ga0070669_100080241 3300005353 Bacteria 2428
14 Ga0070675_100000122 3300005354 Bacteria 45804
15 Ga0070659_100005550 3300005366 Bacteria 9063
16 Ga0070667_100128336 3300005367 Bacteria 2211
17 Ga0070667_100542716 3300005367 Bacteria 1068
18 Ga0070714_100046929 3300005435 Bacteria 3666
19 Ga0070713_100009281 3300005436 Bacteria 7032
20 Ga0070710_10000130 3300005437 Bacteria 34963
21 Ga0070710_10006389 3300005437 Bacteria 5661
22 Ga0070701_10086865 3300005438 Bacteria 1705
23 Ga0070700_100019035 3300005441 Bacteria 3958
24 Ga0070694_100521183 3300005444 Bacteria 948
25 Ga0070663_100006512 3300005455 Bacteria 7032
26 Ga0070678_100138342 3300005456 Bacteria 1945
27 Ga0070678_100178793 3300005456 Bacteria 1735
28 Ga0070681_11111820 3300005458 Bacteria 711
29 Ga0070699_101050378 3300005518 Bacteria 747
30 Ga0070684_100065850 3300005535 Bacteria 3181
31 Ga0070695_100627732 3300005545 Bacteria 846
32 Ga0070665_100216684 3300005548 Bacteria 1915
33 Ga0070704_100781290 3300005549 Bacteria 852
34 Ga0068855_100816523 3300005563 Bacteria 990
35 Ga0070664_100071921 3300005564 Bacteria 2965
36 Ga0068857_100408755 3300005577 Bacteria 1264
37 Ga0068854_100028991 3300005578 Bacteria 3829
38 Ga0068852_100041894 3300005616 Bacteria 3874
39 Ga0068861_100057957 3300005719 Bacteria 2960
40 Ga0068861_100060466 3300005719 Bacteria 2904
41 Ga0068858_100057756 3300005842 Bacteria 3586
42 Ga0068860_100346569 3300005843 Bacteria 1461
43 Ga0068862_100916956 3300005844 Bacteria 862
44 Ga0081455_10000123 3300005937 Bacteria 89254
45 Ga0081455_10100090 3300005937 Bacteria 2330
46 Ga0081539_10100446 3300005985 Bacteria 1476
47 Ga0070717_10189906 3300006028 Bacteria 1795
48 Ga0070716_100244351 3300006173 Bacteria 1219
49 Ga0105240_10300779 3300009093 Bacteria 1835
50 Ga0111539_10000110 3300009094 Bacteria 89582
51 Ga0105245_10009791 3300009098 Bacteria 8350
52 Ga0105243_10749937 3300009148 Bacteria 957
53 Ga0105238_11016057 3300009551 Bacteria 850
54 Ga0105249_10179605 3300009553 Bacteria 2058
55 Ga0105029_100457 3300009984 Bacteria 2193
56 Ga0157374_10470303 3300013296 Bacteria 1259
57 Ga0157375_10148549 3300013308 Bacteria 2477
58 Ga0157377_10011270 3300014745 Bacteria 4457
59 Ga0206353_10588603 3300020082 Bacteria 1939
60 Ga0207426_1001167 3300025302 Bacteria 23525
61 Ga0207426_1006616 3300025302 Bacteria 4990
62 Ga0207426_1007172 3300025302 Bacteria 4706
63 Ga0207656_10319507 3300025321 Bacteria 771
64 Ga0207692_10000053 3300025898 Bacteria 34210
65 Ga0207707_10770149 3300025912 Bacteria 803
66 Ga0207662_10424419 3300025918 Bacteria 905
67 Ga0207649_10041580 3300025920 Bacteria 2798
68 Ga0207652_10234230 3300025921 Bacteria 1655
69 Ga0207652_10828481 3300025921 Bacteria 820
70 Ga0207681_10021883 3300025923 Bacteria 4071
71 Ga0207694_10705455 3300025924 Bacteria 851
72 Ga0207650_10051643 3300025925 Bacteria 3043
73 Ga0207650_10585435 3300025925 Bacteria 937
74 Ga0207659_10005652 3300025926 Bacteria 7606
75 Ga0207687_10017357 3300025927 Bacteria 4737
76 Ga0207700_10047849 3300025928 Bacteria 3173
77 Ga0207664_10028766 3300025929 Bacteria 4227
78 Ga0207690_10033791 3300025932 Bacteria 3291
79 Ga0207706_10014515 3300025933 Bacteria 7139
80 Ga0207709_10340665 3300025935 Bacteria 1128
81 Ga0207689_10002930 3300025942 Bacteria 15756
82 Ga0207679_10017001 3300025945 Bacteria 4839
83 Ga0207651_10337152 3300025960 Bacteria 1266
84 Ga0207668_10003626 3300025972 Bacteria 9068
85 Ga0207668_10012055 3300025972 Bacteria 5277
86 Ga0207668_10056069 3300025972 Bacteria 2743
87 Ga0207640_10019681 3300025981 Bacteria 3992
88 Ga0207658_10110975 3300025986 Bacteria 2168
89 Ga0207677_10012380 3300026023 Bacteria 4902
90 Ga0207703_10049760 3300026035 Bacteria 3388
91 Ga0207678_10002053 3300026067 Bacteria 18263
92 Ga0207678_10012084 3300026067 Bacteria 7582
93 Ga0207678_10173763 3300026067 Bacteria 1839
94 Ga0207708_10008567 3300026075 Bacteria 7567
95 Ga0207674_10233588 3300026116 Bacteria 1787
96 Ga0207675_100694485 3300026118 Bacteria 1026
97 Ga0207683_10034544 3300026121 Bacteria 4395
98 Ga0207683_10168725 3300026121 Bacteria 1981
99 Ga0207428_10214896 3300027907 Bacteria 1443
100 Ga0268266_10173991 3300028379 Bacteria 1956
101 Ga0268264_11042783 3300028381 Bacteria 825
102 Ga0307515_10000478 3300028794 Bacteria 95304
103 Ga0307511_10130091 3300030521 Bacteria 1520
104 Ga0307512_10017859 3300030522 Bacteria 6494
105 Ga0316177_1200102 3300030731 Bacteria 3418
106 Ga0316176_1132912 3300030732 Bacteria 2718
107 Ga0316180_1188068 3300030736 Bacteria 728
108 Ga0307513_10823730 3300031456 Bacteria 634
109 Ga0307509_10109946 3300031507 Bacteria 2763
110 Ga0307516_10000433 3300031730 Bacteria 54987
111 Ga0307413_10001414 3300031824 Bacteria 9069
112 Ga0307413_10178342 3300031824 Bacteria 1512
113 Ga0307410_10360117 3300031852 Bacteria 1165
114 Ga0307406_10211185 3300031901 Bacteria 1436
115 Ga0307406_10289051 3300031901 Bacteria 1254
116 Ga0307409_100486798 3300031995 Bacteria 1198
117 Ga0307416_100256089 3300032002 Bacteria 1707
118 Ga0307411_11198660 3300032005 Bacteria 688
119 Ga0307415_100138603 3300032126 Bacteria 1854
120 Ga0307415_100204704 3300032126 Bacteria 1569
121 Ga0307415_100905985 3300032126 Bacteria 813
122 Ga0373948_0021267 3300034817 Bacteria 1241
123 Ga0373938_0081810 3300034957 Bacteria 787
124 Ga0373942_0002688 3300035207 Bacteria 4259
125 Ga0395901_1220585 3300038443 Bacteria 717
126 Ga0451807_2207066 3300041486 Bacteria 707
127 Ga0451853_2090584 3300041512 Bacteria 639
128 Ga0439449_0117025 3300042007 Bacteria 989
129 Ga0466969_0015994 3300044656 Bacteria 3931
130 Ga0466972_0000609 3300044658 Bacteria 17503
131 Ga0466965_0004459 3300044683 Bacteria 6227
132 Ga0466965_0006128 3300044683 Bacteria 5438
133 Ga0466965_0008167 3300044683 Bacteria 4834
134 Ga0466966_0252772 3300044684 Bacteria 1061
135 Ga0466961_0030821 3300044693 Bacteria 3446
136 Ga0466961_0066136 3300044693 Bacteria 2296
137 Ga0466968_0083253 3300044735 Bacteria 1409
138 Ga0466970_0104621 3300044765 Bacteria 1543
139 Ga0466970_0212071 3300044765 Bacteria 1079
140 Ga0466960_0068247 3300044901 Bacteria 1763
141 Ga0466960_0362591 3300044901 Bacteria 829
142 Ga0466959_0156897 3300045049 Bacteria 1601
143 Ga0466959_0511442 3300045049 Bacteria 811
144 Ga0466967_0003071 3300045976 Bacteria 10726
145 Ga0466967_0223254 3300045976 Bacteria 1791
146 Ga0466967_1262937 3300045976 Bacteria 736
147 Ga0495580_0320135 3300046472 Bacteria 1054
148 Ga0495585_0015811 3300046492 Bacteria 4381
149 Ga0495606_0001145 3300046507 Bacteria 37635
150 Ga0495666_0133754 3300046526 Bacteria 1158
151 Ga0495652_0193567 3300046529 Bacteria 1550
152 Ga0495640_0112943 3300046533 Bacteria 1773
153 Ga0495645_0007371 3300046543 Bacteria 7652
154 Ga0495622_0082505 3300046557 Bacteria 1479
155 Ga0495668_0000208 3300046616 Bacteria 84956
156 Ga0495625_0001415 3300046660 Bacteria 29343
157 Ga0495588_0103362 3300046674 Bacteria 1498
158 Ga0495658_0020258 3300046683 Bacteria 3487
159 Ga0495604_0071836 3300047317 Bacteria 2617
160 Ga0495676_0175731 3300047321 Bacteria 1504
161 Ga0495676_0370043 3300047321 Bacteria 955
162 Ga0495683_0146605 3300047323 Bacteria 1102
163 Ga0495675_0023836 3300047444 Bacteria 3900
164 Ga0495685_061365 3300047447 Bacteria 1266
165 Ga0495626_0000552 3300048091 Bacteria 37174
166 Ga0496108_0000084 3300048911 Bacteria 101818
167 Ga0496126_0099620 3300048929 Bacteria 2545
168 Ga0501033_0003335 3300049570 Bacteria 13266
169 Ga0501036_0002108 3300049572 Bacteria 15531
170 Ga0501037_0231293 3300049573 Bacteria 1298
171 Ga0501038_0023555 3300049574 Bacteria 5502
172 Ga0501038_0144524 3300049574 Bacteria 1943
173 Ga0501039_0189783 3300049575 Bacteria 1616
174 Ga0501070_0002053 3300049586 Bacteria 17681
175 Ga0501074_0018670 3300049590 Bacteria 5039
176 Ga0501035_0010608 3300049822 Bacteria 8531
177 Ga0501044_0819375 3300049823 Bacteria 809
178 Ga0501044_0939464 3300049823 Bacteria 738
179 nmdc:mga08y16_19849_c1 3300050511 Bacteria 7088
180 Ga0495619_0220671 3300053085 Bacteria 1313
181 Ga0500641_0013961 3300053096 Bacteria 2958
182 Ga0500553_025440 3300053101 Bacteria 2986
183 Ga0500580_052390 3300053113 Bacteria 1715
184 Ga0500614_010341 3300053123 Bacteria 2002
185 Ga0500658_0270912 3300053134 Bacteria 780
186 Ga0500577_0054479 3300053142 Bacteria 1515
187 Ga0500577_0345750 3300053142 Bacteria 650
188 8055175606 8055172936 Bacteria 9305943
189 2501945621 2501939600 Bacteria 6907073
190 2515857086 2515154155 Bacteria 7985436
191 2559424366 2558860280 Bacteria 11429938
192 2623589594 2622736626 Bacteria 7181580
193 2676475012 2675903058 Bacteria 6822861
194 2768643425 2767802112 Bacteria 6465194
195 2791913609 2791354901 Bacteria 8322202
196 2811849213 2808606982 Bacteria 7791042
197 2827630819 2827628540 Bacteria 6858585
198 2855673212 2855670206 Bacteria 7120389
199 2855681011 2855676851 Bacteria 7063653
200 2855685671 2855683550 Bacteria 7134265
201 2856743450 2856741275 Bacteria 8096094
202 2856863090 2856858025 Bacteria 7255264
203 2857293596 2857288857 Bacteria 7189066
204 2858851402 2858848962 Bacteria 6963058
205 2858870926 2858868258 Bacteria 7683772
206 2858887655 2858882152 Bacteria 7230291
207 2858892774 2858888857 Bacteria 7060307
208 2858906019 2858902515 Bacteria 7086037
209 2862711137 2862705112 Bacteria 6563286
210 2866612573 2866612099 Bacteria 7543886
211 2867307423 2867302475 Bacteria 7087181
212 2867318056 2867312974 Bacteria 7058875
213 2867324245 2867319477 Bacteria 7069771
214 2867478739 2867475112 Bacteria 6909112
215 2869051829 2869048445 Bacteria 6875584
216 2869067021 2869061728 Bacteria 7112407
217 2869070222 2869068681 Bacteria 7205615
218 2873318119 2873314349 Bacteria 8512634
219 2880500651 2880495981 Bacteria 7340502
220 2887484129 2887478801 Bacteria 8972725
221 2891404544 2891395885 Bacteria 9251614
222 2891561789 2891554331 Bacteria 8812224
223 2891565719 2891562705 Bacteria 8039471
224 2899364943 2899359706 Bacteria 10940472
225 2902583172 2902582711 Bacteria 6187705
226 2990089138 2990088156 Bacteria 6657676
227 2996225021 2996221748 Bacteria 6799777
228 3003007822 3002998708 Bacteria 11715108
229 3006489922 3006486233 Bacteria 8157040
230 649815138 649633069 Bacteria 6962533
231 8001782737 8001781756 Bacteria 9586736
232 8003317466 8003314358 Bacteria 10575343
233 8003831281 8003830390 Bacteria 6541657
234 8008487600 8008485437 Bacteria 7198341
235 8025526881 8025524527 Bacteria 7197316
236 8054729045 8054727385 Bacteria 7558670
237 8055413018 8055412473 Bacteria 6257500
238 8056209760 8056207758 Bacteria 8639239
239 JGI25406J46586_10057239
240 rootH2_10227900
241 rootL2_10051785
242 JGI25405J52794_10044012
243 Ga0068869_100018914
244 Ga0070680_101038102
245 Ga0068868_100005342
246 Ga0070660_100334472
247 Ga0070692_11070835
248 Ga0070668_100001166
249 Ga0070668_100063829
250 Ga0070668_101520065
251 Ga0070669_100080241
252 Ga0070675_100000122
253 Ga0070659_100005550
254 Ga0070667_100128336
255 Ga0070667_100542716
256 Ga0070714_100046929
257 Ga0070713_100009281
258 Ga0070710_10000130
259 Ga0070710_10006389
260 Ga0070701_10086865
261 Ga0070700_100019035
262 Ga0070694_100521183
263 Ga0070663_100006512
264 Ga0070678_100138342
265 Ga0070678_100178793
266 Ga0070681_11111820
267 Ga0070699_101050378
268 Ga0070684_100065850
269 Ga0070695_100627732
270 Ga0070665_100216684
271 Ga0070704_100781290
272 Ga0068855_100816523
273 Ga0070664_100071921
274 Ga0068857_100408755
275 Ga0068854_100028991
276 Ga0068852_100041894
277 Ga0068861_100057957
278 Ga0068861_100060466
279 Ga0068858_100057756
280 Ga0068860_100346569
281 Ga0068862_100916956
282 Ga0081455_10000123
283 Ga0081455_10100090
284 Ga0081539_10100446
285 Ga0070717_10189906
286 Ga0070716_100244351
287 Ga0105240_10300779
288 Ga0111539_10000110
289 Ga0105245_10009791
290 Ga0105243_10749937
291 Ga0105238_11016057
292 Ga0105249_10179605
293 Ga0105029_100457
294 Ga0157374_10470303
295 Ga0157375_10148549
296 Ga0157377_10011270
297 Ga0206353_10588603
298 Ga0207426_1001167
299 Ga0207426_1006616
300 Ga0207426_1007172
301 Ga0207656_10319507
302 Ga0207692_10000053
303 Ga0207707_10770149
304 Ga0207662_10424419
305 Ga0207649_10041580
306 Ga0207652_10234230
307 Ga0207652_10828481
308 Ga0207681_10021883
309 Ga0207694_10705455
310 Ga0207650_10051643
311 Ga0207650_10585435
312 Ga0207659_10005652
313 Ga0207687_10017357
314 Ga0207700_10047849
315 Ga0207664_10028766
316 Ga0207690_10033791
317 Ga0207706_10014515
318 Ga0207709_10340665
319 Ga0207689_10002930
320 Ga0207679_10017001
321 Ga0207651_10337152
322 Ga0207668_10003626
323 Ga0207668_10012055
324 Ga0207668_10056069
325 Ga0207640_10019681
326 Ga0207658_10110975
327 Ga0207677_10012380
328 Ga0207703_10049760
329 Ga0207678_10002053
330 Ga0207678_10012084
331 Ga0207678_10173763
332 Ga0207708_10008567
333 Ga0207674_10233588
334 Ga0207675_100694485
335 Ga0207683_10034544
336 Ga0207683_10168725
337 Ga0207428_10214896
338 Ga0268266_10173991
339 Ga0268264_11042783
340 Ga0307515_10000478
341 Ga0307511_10130091
342 Ga0307512_10017859
343 Ga0316177_1200102
344 Ga0316176_1132912
345 Ga0316180_1188068
346 Ga0307513_10823730
347 Ga0307509_10109946
348 Ga0307516_10000433
349 Ga0307413_10001414
350 Ga0307413_10178342
351 Ga0307410_10360117
352 Ga0307406_10211185
353 Ga0307406_10289051
354 Ga0307409_100486798
355 Ga0307416_100256089
356 Ga0307411_11198660
357 Ga0307415_100138603
358 Ga0307415_100204704
359 Ga0307415_100905985
360 Ga0373948_0021267
361 Ga0373938_0081810
362 Ga0373942_0002688
363 Ga0395901_1220585
364 Ga0451807_2207066
365 Ga0451853_2090584
366 Ga0439449_0117025
367 Ga0466969_0015994
368 Ga0466972_0000609
369 Ga0466965_0004459
370 Ga0466965_0006128
371 Ga0466965_0008167
372 Ga0466966_0252772
373 Ga0466961_0030821
374 Ga0466961_0066136
375 Ga0466968_0083253
376 Ga0466970_0104621
377 Ga0466970_0212071
378 Ga0466960_0068247
379 Ga0466960_0362591
380 Ga0466959_0156897
381 Ga0466959_0511442
382 Ga0466967_0003071
383 Ga0466967_0223254
384 Ga0466967_1262937
385 Ga0495580_0320135
386 Ga0495585_0015811
387 Ga0495606_0001145
388 Ga0495666_0133754
389 Ga0495652_0193567
390 Ga0495640_0112943
391 Ga0495645_0007371
392 Ga0495622_0082505
393 Ga0495668_0000208
394 Ga0495625_0001415
395 Ga0495588_0103362
396 Ga0495658_0020258
397 Ga0495604_0071836
398 Ga0495676_0175731
399 Ga0495676_0370043
400 Ga0495683_0146605
401 Ga0495675_0023836
402 Ga0495685_061365
403 Ga0495626_0000552
404 Ga0496108_0000084
405 Ga0496126_0099620
406 Ga0501033_0003335
407 Ga0501036_0002108
408 Ga0501037_0231293
409 Ga0501038_0023555
410 Ga0501038_0144524
411 Ga0501039_0189783
412 Ga0501070_0002053
413 Ga0501074_0018670
414 Ga0501035_0010608
415 Ga0501044_0819375
416 Ga0501044_0939464
417 nmdc:mga08y16_19849_c1
418 Ga0495619_0220671
419 Ga0500641_0013961
420 Ga0500553_025440
421 Ga0500580_052390
422 Ga0500614_010341
423 Ga0500658_0270912
424 Ga0500577_0054479
425 Ga0500577_0345750
426 8055175606
427 2501945621
428 2515857086
429 2559424366
430 2623589594
431 2676475012
432 2768643425
433 2791913609
434 2811849213
435 2827630819
436 2855673212
437 2855681011
438 2855685671
439 2856743450
440 2856863090
441 2857293596
442 2858851402
443 2858870926
444 2858887655
445 2858892774
446 2858906019
447 2862711137
448 2866612573
449 2867307423
450 2867318056
451 2867324245
452 2867478739
453 2869051829
454 2869067021
455 2869070222
456 2873318119
457 2880500651
458 2887484129
459 2891404544
460 2891561789
461 2891565719
462 2899364943
463 2902583172
464 2990089138
465 2996225021
466 3003007822
467 3006489922
468 649815138
469 8001782737
470 8003317466
471 8003831281
472 8008487600
473 8025526881
474 8054729045
475 8055413018
476 8056209760

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04978

DUF664

Protein of unknown function (DUF664)

40

187

0.94

PF12867

DinB_2

DinB superfamily

45

178

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yqy-assembly1.cif.gz_A crystal structure of tt2238, a four-helix bundle protein 0.8013 17 153
2f22-assembly1.cif.gz_A crystal structure of a putative dna damage-inducable (dinb) protein (bh3987) from bacillus halodurans at 1.42 a resolution 0.7639 17 165
3cex-assembly1.cif.gz_A crystal structure of the conserved protein of locus ef_3021 from enterococcus faecalis 0.761 10 164
2yqy-assembly2.cif.gz_B crystal structure of tt2238, a four-helix bundle protein 0.7587 17 154
2yqy-assembly1.cif.gz_A crystal structure of tt2238, a four-helix bundle protein 0.7497 17 153
ID Description Score Start End Superfamily
2yqyB00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7587 17 154 1.20.120.450
af_P71985_5_134_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7577 20 158 1.20.120.450
af_O53728_4_171_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7575 14 158 1.20.120.450
af_P71985_5_134_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7384 20 158 1.20.120.450
2hkvA01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7266 10 160 1.20.120.450
ID Description Score Start End GO Terms
AF-A0A6V8LL07-F1-model_v4 Mini-circle protein 1.002 16 167
AF-A0A1C6TU69-F1-model_v4 DinB family protein 1.001 2 167
AF-A0A640TX88-F1-model_v4 Mini-circle protein 1 2 167
AF-A0A0L8NN98-F1-model_v4 deleted 0.9973 2 167
AF-F8JIW7-F1-model_v4 Mini-circle protein 0.9959 1 167

Map