F351459

General Info

Members Datasets Scaffolds Average Seq Length
238 186 476 339

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2687453257|2688069538
Length 379
Sequence QDGETAGGLRKEAAPSGDADRRDPGVFRTVHWVGDAAAGRLRMIDQTRLPSQFVEIDCDDVESVWGAIKRLSVRGAPAIGVAAAYGAVIGARSGDHADPGAIREALRTAAAHLRTSRPTAVNLFWALDRMEAAADAAIREPRGPLLERLLDEAHAIAREDRAMCREIGRFGAELIEDDDGVLTHCNAGGLATADYGTALAVIFSAHEQGKSLRVFADETRPLLQGARLTAWELVNRGIDVTLICDNMAAQVMKEGKVRKVVVGADRIAANGDAANKIGTYGVALLAKAHGIPFYVAAPSSTFDLTLADGSGIPIEERDPREVTEGFGLRTAPEGVAVYNPAFDVTPADLITGIITERGVIRPVDADSVRRVLGTPKLES

Samples

Sample ID Description Type Environment
1 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
2 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
62 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
63 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
64 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
65 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
66 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
67 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
68 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
71 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
72 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
73 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
74 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
75 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
76 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
77 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
78 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
79 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
84 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
85 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
86 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
87 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
88 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
89 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
90 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
91 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
92 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
96 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
97 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
98 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
105 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
106 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
107 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
108 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
109 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
110 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
111 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
112 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
113 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
114 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
115 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
116 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
117 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
118 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
119 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
120 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
121 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
122 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
125 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
126 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
129 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
132 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
133 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
134 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
138 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
139 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
144 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
145 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
146 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
147 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
148 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
160 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
168 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
169 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
170 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
171 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
172 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
173 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
174 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
175 2738541295 Bacillus sp. OK085 Isolate Unclassified
176 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
177 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
178 2857472729 Cohnella sp. R-74144 Isolate Unclassified
179 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
180 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
181 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
182 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
183 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
184 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
185 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
186 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.86
Metatranscriptomes 0.42
Isolates 6.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.68
Nodule 0
Rhizoplane 6.3
Rhizosphere 86.55
Stem 0
Stem Tuber 0
Unclassified 1.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055541_1003507 3300003841 Bacteria 2938
2 Ga0070666_10185266 3300005335 Bacteria 1461
3 Ga0068868_100001367 3300005338 Bacteria 16809
4 Ga0070660_100018587 3300005339 Bacteria 5081
5 Ga0070661_100116569 3300005344 Bacteria 1998
6 Ga0070669_100121399 3300005353 Bacteria 1994
7 Ga0070675_100041691 3300005354 Bacteria 3749
8 Ga0070673_100235080 3300005364 Bacteria 1591
9 Ga0070714_100328696 3300005435 Bacteria 1431
10 Ga0070700_100044557 3300005441 Bacteria 2733
11 Ga0070681_10353849 3300005458 Bacteria 1379
12 Ga0070706_100015226 3300005467 Bacteria 7100
13 Ga0070686_100033500 3300005544 Bacteria 3157
14 Ga0068855_100015445 3300005563 Bacteria 9192
15 Ga0070702_100002294 3300005615 Bacteria 8198
16 Ga0068859_100023567 3300005617 Bacteria 6178
17 Ga0068859_100056292 3300005617 Bacteria 3957
18 Ga0068858_100084931 3300005842 Bacteria 2945
19 Ga0068860_100038718 3300005843 Bacteria 4562
20 Ga0081539_10012020 3300005985 Bacteria 6737
21 Ga0070717_10007740 3300006028 Bacteria 7993
22 Ga0070717_10133444 3300006028 Bacteria 2137
23 Ga0075428_100031005 3300006844 Bacteria 5913
24 Ga0075428_100104379 3300006844 Bacteria 3091
25 Ga0075431_100028875 3300006847 Bacteria 5703
26 Ga0075431_100133807 3300006847 Bacteria 2556
27 Ga0075434_100000636 3300006871 Bacteria 27160
28 Ga0068865_100080305 3300006881 Bacteria 2339
29 Ga0075436_100062034 3300006914 Bacteria 2583
30 Ga0097620_100023567 3300006931 Bacteria 6178
31 Ga0097620_100056293 3300006931 Bacteria 3957
32 Ga0099794_10000008 3300007265 Bacteria 124724
33 Ga0111539_10013347 3300009094 Bacteria 10265
34 Ga0105242_10063412 3300009176 Bacteria 3043
35 Ga0105248_10137113 3300009177 Bacteria 2760
36 Ga0105237_10085030 3300009545 Bacteria 3153
37 Ga0105249_10246074 3300009553 Bacteria 1770
38 Ga0105239_10123073 3300010375 Bacteria 2882
39 Ga0105246_10004285 3300011119 Bacteria 8678
40 Ga0157374_10041836 3300013296 Bacteria 4225
41 Ga0163162_10191179 3300013306 Bacteria 2175
42 Ga0157372_10026515 3300013307 Bacteria 6306
43 Ga0157375_10161900 3300013308 Bacteria 2380
44 Ga0163163_10013492 3300014325 Bacteria 7484
45 Ga0157377_10007619 3300014745 Bacteria 5239
46 Ga0157379_10167909 3300014968 Bacteria 1981
47 Ga0209566_100203 3300025225 Bacteria 61464
48 Ga0209675_1006024 3300025291 Bacteria 4956
49 Ga0209025_1010564 3300025294 Bacteria 6240
50 Ga0207688_10002432 3300025901 Bacteria 10028
51 Ga0207699_10253423 3300025906 Bacteria 1214
52 Ga0207643_10053608 3300025908 Bacteria 2291
53 Ga0207671_10151978 3300025914 Bacteria 1789
54 Ga0207657_10003779 3300025919 Bacteria 16095
55 Ga0207694_10004040 3300025924 Bacteria 11533
56 Ga0207687_10002472 3300025927 Bacteria 12546
57 Ga0207687_10010142 3300025927 Bacteria 6161
58 Ga0207704_10035957 3300025938 Bacteria 2845
59 Ga0207665_10042420 3300025939 Bacteria 3041
60 Ga0207677_10051486 3300026023 Bacteria 2792
61 Ga0207703_10062461 3300026035 Bacteria 3051
62 Ga0207708_10055622 3300026075 Bacteria 3017
63 Ga0207648_10311350 3300026089 Bacteria 1413
64 Ga0207683_10013019 3300026121 Bacteria 7101
65 Ga0207698_10079153 3300026142 Bacteria 2643
66 Ga0209588_1000003 3300027671 Bacteria 308861
67 Ga0265337_1000256 3300028556 Bacteria 28806
68 Ga0265326_10001452 3300028558 Bacteria 8337
69 Ga0265319_1000104 3300028563 Bacteria 65797
70 Ga0265319_1000138 3300028563 Bacteria 54541
71 Ga0265334_10003085 3300028573 Bacteria 7611
72 Ga0265334_10042493 3300028573 Bacteria 1771
73 Ga0265318_10000696 3300028577 Bacteria 22606
74 Ga0265323_10000184 3300028653 Bacteria 37673
75 Ga0265323_10017145 3300028653 Bacteria 2818
76 Ga0265322_10000142 3300028654 Bacteria 33757
77 Ga0265322_10009917 3300028654 Bacteria 2762
78 Ga0265336_10000179 3300028666 Bacteria 44410
79 Ga0265338_10002496 3300028800 Bacteria 27416
80 Ga0265338_10019387 3300028800 Bacteria 7218
81 Ga0265338_10123050 3300028800 Bacteria 2063
82 Ga0265324_10000926 3300029957 Bacteria 18451
83 Ga0265324_10010267 3300029957 Unclassified 3619
84 Ga0265330_10000250 3300031235 Bacteria 40500
85 Ga0265330_10000876 3300031235 Bacteria 18777
86 Ga0265332_10000383 3300031238 Bacteria 32380
87 Ga0265332_10012823 3300031238 Bacteria 3719
88 Ga0265332_10058182 3300031238 Viruses 1655
89 Ga0265328_10002462 3300031239 Bacteria 8302
90 Ga0265320_10004980 3300031240 Bacteria 8611
91 Ga0265320_10010305 3300031240 Bacteria 5573
92 Ga0265325_10006240 3300031241 Bacteria 7264
93 Ga0265329_10005023 3300031242 Bacteria 5403
94 Ga0265340_10000657 3300031247 Bacteria 19426
95 Ga0265340_10048155 3300031247 Bacteria 2073
96 Ga0265339_10000436 3300031249 Bacteria 32747
97 Ga0265339_10084384 3300031249 Bacteria 1674
98 Ga0265331_10001754 3300031250 Bacteria 15590
99 Ga0265316_10001003 3300031344 Bacteria 30637
100 Ga0265316_10012650 3300031344 Bacteria 7555
101 Ga0265313_10000506 3300031595 Bacteria 40924
102 Ga0265314_10002109 3300031711 Bacteria 20907
103 Ga0265314_10120703 3300031711 Bacteria 1650
104 Ga0265342_10001301 3300031712 Bacteria 23409
105 Ga0265342_10019351 3300031712 Bacteria 4389
106 Ga0265342_10033015 3300031712 Unclassified 3186
107 Ga0307405_10108077 3300031731 Bacteria 1879
108 Ga0307406_10119005 3300031901 Bacteria 1833
109 Ga0373926_0005722 3300035083 Bacteria 4104
110 Ga0373944_0023686 3300035089 Bacteria 1793
111 Ga0373923_0016498 3300035111 Bacteria 2808
112 Ga0373943_0006444 3300035170 Bacteria 5271
113 Ga0373955_0012601 3300035172 Bacteria 4066
114 Ga0316574_0112349 3300035398 Bacteria 1747
115 Ga0373935_0021003 3300035692 Bacteria 3994
116 Ga0373947_0070819 3300035725 Bacteria 2137
117 Ga0373925_0005707 3300037068 Bacteria 9252
118 Ga0436364_0239380 3300037853 Bacteria 1300
119 Ga0436360_1146533 3300039438 Bacteria 1155
120 Ga0439433_0003211 3300041999 Bacteria 3504
121 Ga0439449_0010589 3300042007 Bacteria 3484
122 Ga0451577_0000067 3300042876 Bacteria 250981
123 Ga0451577_0259981 3300042876 Bacteria 1572
124 Ga0453683_0009472 3300044673 Bacteria 6499
125 Ga0453684_0000072 3300044712 Bacteria 442457
126 Ga0453684_0000113 3300044712 Bacteria 359598
127 Ga0453684_0000215 3300044712 Bacteria 250981
128 Ga0453684_0002747 3300044712 Bacteria 41692
129 Ga0453684_0004996 3300044712 Bacteria 26957
130 Ga0453684_0008224 3300044712 Bacteria 18810
131 Ga0453684_0025169 3300044712 Bacteria 8652
132 Ga0453684_0056038 3300044712 Bacteria 5117
133 Ga0453684_0067316 3300044712 Bacteria 4555
134 Ga0453684_0144593 3300044712 Unclassified 2835
135 Ga0451576_0000016 3300045051 Bacteria 565050
136 Ga0451576_0000550 3300045051 Bacteria 80494
137 Ga0451576_0014028 3300045051 Bacteria 8931
138 Ga0451576_0130358 3300045051 Bacteria 2621
139 Ga0451576_0144561 3300045051 Bacteria 2480
140 Ga0466967_0463853 3300045976 Bacteria 1239
141 Ga0495641_0001756 3300046461 Bacteria 18044
142 Ga0495651_0189708 3300046462 Bacteria 1447
143 Ga0495653_0077671 3300046463 Bacteria 2464
144 Ga0495580_0015192 3300046472 Bacteria 5821
145 Ga0495582_0008515 3300046473 Bacteria 5657
146 Ga0495639_0002071 3300046475 Bacteria 8883
147 Ga0495639_0013034 3300046475 Bacteria 3586
148 Ga0495662_0005984 3300046476 Bacteria 6081
149 Ga0495662_0008767 3300046476 Bacteria 4974
150 Ga0495662_0023063 3300046476 Bacteria 3005
151 Ga0495630_0000003 3300046517 Bacteria 524289
152 Ga0495630_0034300 3300046517 Bacteria 3789
153 Ga0495666_0008171 3300046526 Bacteria 5243
154 Ga0495652_0073014 3300046529 Bacteria 2858
155 Ga0495665_0001208 3300046531 Bacteria 13785
156 Ga0495640_0010034 3300046533 Bacteria 7342
157 Ga0495667_0029165 3300046559 Bacteria 3713
158 Ga0495634_0002112 3300046642 Bacteria 16780
159 Ga0495588_0011400 3300046674 Bacteria 4170
160 Ga0495657_0040062 3300046675 Bacteria 3215
161 Ga0495599_0074725 3300046678 Bacteria 2116
162 Ga0495647_0009425 3300046681 Bacteria 3308
163 Ga0495647_0029773 3300046681 Bacteria 2021
164 Ga0495658_0005293 3300046683 Bacteria 6347
165 Ga0495613_0011260 3300046689 Bacteria 6644
166 Ga0495600_0000554 3300046809 Bacteria 19390
167 Ga0495581_0004634 3300047315 Bacteria 7937
168 Ga0495581_0041798 3300047315 Bacteria 2653
169 Ga0495604_0154119 3300047317 Bacteria 1629
170 Ga0495674_0037163 3300047319 Bacteria 4376
171 Ga0495674_0127422 3300047319 Bacteria 2146
172 Ga0495676_0010828 3300047321 Bacteria 8250
173 Ga0495680_0052273 3300047322 Bacteria 3185
174 Ga0495684_0005578 3300047471 Bacteria 9802
175 Ga0495684_0133496 3300047471 Bacteria 1863
176 Ga0495593_0007051 3300047673 Bacteria 6590
177 Ga0495614_0002670 3300048089 Bacteria 7926
178 Ga0496102_0022751 3300048905 Bacteria 5555
179 Ga0496103_0013607 3300048906 Bacteria 4826
180 Ga0496104_0269693 3300048907 Bacteria 1614
181 Ga0496105_0030645 3300048908 Bacteria 4407
182 Ga0496106_0007330 3300048909 Bacteria 8151
183 Ga0496107_0000676 3300048910 Bacteria 19307
184 Ga0496108_0005789 3300048911 Bacteria 10016
185 Ga0496109_0005934 3300048912 Bacteria 10249
186 Ga0496109_0224127 3300048912 Bacteria 1768
187 Ga0496111_0001185 3300048914 Bacteria 14514
188 Ga0496112_0006970 3300048915 Bacteria 9977
189 Ga0496112_0248121 3300048915 Bacteria 1732
190 Ga0496113_0011156 3300048916 Bacteria 5978
191 Ga0496115_0007506 3300048918 Bacteria 8027
192 Ga0496115_0260865 3300048918 Bacteria 1425
193 Ga0496116_0026291 3300048919 Bacteria 4260
194 Ga0496122_0097665 3300048925 Bacteria 1976
195 Ga0501312_014302 3300049528 Bacteria 1113
196 Ga0501033_0111670 3300049570 Bacteria 1989
197 Ga0501034_0121040 3300049571 Bacteria 2603
198 Ga0501034_0162307 3300049571 Bacteria 2205
199 Ga0501037_0028009 3300049573 Bacteria 4163
200 Ga0501043_0134563 3300049579 Bacteria 1936
201 Ga0501047_0193020 3300049581 Bacteria 1899
202 Ga0501048_0226542 3300049582 Bacteria 1326
203 Ga0501068_0144579 3300049584 Bacteria 1492
204 Ga0501070_0360674 3300049586 Bacteria 1179
205 Ga0501071_0033114 3300049587 Bacteria 3672
206 Ga0501072_0038562 3300049588 Bacteria 3750
207 Ga0501072_0308842 3300049588 Bacteria 1257
208 Ga0501076_0045244 3300049592 Bacteria 3475
209 Ga0501217_005763 3300049661 Bacteria 2603
210 Ga0501079_0032169 3300049741 Bacteria 4032
211 Ga0501080_0020656 3300049742 Bacteria 6100
212 Ga0501035_0146574 3300049822 Bacteria 2050
213 Ga0501044_0440711 3300049823 Bacteria 1210
214 nmdc:mga06r32_122252_c1 3300050510 Bacteria 2568
215 nmdc:mga06r32_24744_c1 3300050510 Bacteria 5578
216 nmdc:mga08y16_655992_c1 3300050511 Bacteria 1053
217 nmdc:mga0n895_1093_c1 3300050512 Bacteria 19814
218 nmdc:mga08x19_19457_c1 3300050514 Bacteria 4166
219 Ga0495601_0013179 3300053077 Bacteria 4971
220 Ga0495601_0111568 3300053077 Bacteria 1771
221 Ga0495595_0048257 3300053084 Bacteria 1965
222 Ga0501084_0059625 3300054114 Bacteria 3194
223 2688069538 2687453257 Bacteria 6784659
224 2587740815 2585428059 Bacteria 8696589
225 2644427779 2643221676 Bacteria 8119172
226 2687580858 2687453129 Bacteria 4387428
227 2738817430 2738541295 Bacteria 5730091
228 2745166719 2744054657 Bacteria 5016802
229 2817618868 2816332336 Bacteria 5207640
230 2857473560 2857472729 Bacteria 6568124
231 2888580650 2888578766 Bacteria 6743310
232 2889050695 2889049205 Bacteria 7524325
233 2889418143 2889415604 Bacteria 8048700
234 2904118615 2904113452 Bacteria 7796941
235 2919426212 2919425241 Bacteria 8055701
236 2920111356 2920107658 Bacteria 10042636
237 2980187527 2980182181 Bacteria 9454109
238 8057476848 8057473075 Bacteria 5892720
239 Ga0055541_1003507
240 Ga0070666_10185266
241 Ga0068868_100001367
242 Ga0070660_100018587
243 Ga0070661_100116569
244 Ga0070669_100121399
245 Ga0070675_100041691
246 Ga0070673_100235080
247 Ga0070714_100328696
248 Ga0070700_100044557
249 Ga0070681_10353849
250 Ga0070706_100015226
251 Ga0070686_100033500
252 Ga0068855_100015445
253 Ga0070702_100002294
254 Ga0068859_100023567
255 Ga0068859_100056292
256 Ga0068858_100084931
257 Ga0068860_100038718
258 Ga0081539_10012020
259 Ga0070717_10007740
260 Ga0070717_10133444
261 Ga0075428_100031005
262 Ga0075428_100104379
263 Ga0075431_100028875
264 Ga0075431_100133807
265 Ga0075434_100000636
266 Ga0068865_100080305
267 Ga0075436_100062034
268 Ga0097620_100023567
269 Ga0097620_100056293
270 Ga0099794_10000008
271 Ga0111539_10013347
272 Ga0105242_10063412
273 Ga0105248_10137113
274 Ga0105237_10085030
275 Ga0105249_10246074
276 Ga0105239_10123073
277 Ga0105246_10004285
278 Ga0157374_10041836
279 Ga0163162_10191179
280 Ga0157372_10026515
281 Ga0157375_10161900
282 Ga0163163_10013492
283 Ga0157377_10007619
284 Ga0157379_10167909
285 Ga0209566_100203
286 Ga0209675_1006024
287 Ga0209025_1010564
288 Ga0207688_10002432
289 Ga0207699_10253423
290 Ga0207643_10053608
291 Ga0207671_10151978
292 Ga0207657_10003779
293 Ga0207694_10004040
294 Ga0207687_10002472
295 Ga0207687_10010142
296 Ga0207704_10035957
297 Ga0207665_10042420
298 Ga0207677_10051486
299 Ga0207703_10062461
300 Ga0207708_10055622
301 Ga0207648_10311350
302 Ga0207683_10013019
303 Ga0207698_10079153
304 Ga0209588_1000003
305 Ga0265337_1000256
306 Ga0265326_10001452
307 Ga0265319_1000104
308 Ga0265319_1000138
309 Ga0265334_10003085
310 Ga0265334_10042493
311 Ga0265318_10000696
312 Ga0265323_10000184
313 Ga0265323_10017145
314 Ga0265322_10000142
315 Ga0265322_10009917
316 Ga0265336_10000179
317 Ga0265338_10002496
318 Ga0265338_10019387
319 Ga0265338_10123050
320 Ga0265324_10000926
321 Ga0265324_10010267
322 Ga0265330_10000250
323 Ga0265330_10000876
324 Ga0265332_10000383
325 Ga0265332_10012823
326 Ga0265332_10058182
327 Ga0265328_10002462
328 Ga0265320_10004980
329 Ga0265320_10010305
330 Ga0265325_10006240
331 Ga0265329_10005023
332 Ga0265340_10000657
333 Ga0265340_10048155
334 Ga0265339_10000436
335 Ga0265339_10084384
336 Ga0265331_10001754
337 Ga0265316_10001003
338 Ga0265316_10012650
339 Ga0265313_10000506
340 Ga0265314_10002109
341 Ga0265314_10120703
342 Ga0265342_10001301
343 Ga0265342_10019351
344 Ga0265342_10033015
345 Ga0307405_10108077
346 Ga0307406_10119005
347 Ga0373926_0005722
348 Ga0373944_0023686
349 Ga0373923_0016498
350 Ga0373943_0006444
351 Ga0373955_0012601
352 Ga0316574_0112349
353 Ga0373935_0021003
354 Ga0373947_0070819
355 Ga0373925_0005707
356 Ga0436364_0239380
357 Ga0436360_1146533
358 Ga0439433_0003211
359 Ga0439449_0010589
360 Ga0451577_0000067
361 Ga0451577_0259981
362 Ga0453683_0009472
363 Ga0453684_0000072
364 Ga0453684_0000113
365 Ga0453684_0000215
366 Ga0453684_0002747
367 Ga0453684_0004996
368 Ga0453684_0008224
369 Ga0453684_0025169
370 Ga0453684_0056038
371 Ga0453684_0067316
372 Ga0453684_0144593
373 Ga0451576_0000016
374 Ga0451576_0000550
375 Ga0451576_0014028
376 Ga0451576_0130358
377 Ga0451576_0144561
378 Ga0466967_0463853
379 Ga0495641_0001756
380 Ga0495651_0189708
381 Ga0495653_0077671
382 Ga0495580_0015192
383 Ga0495582_0008515
384 Ga0495639_0002071
385 Ga0495639_0013034
386 Ga0495662_0005984
387 Ga0495662_0008767
388 Ga0495662_0023063
389 Ga0495630_0000003
390 Ga0495630_0034300
391 Ga0495666_0008171
392 Ga0495652_0073014
393 Ga0495665_0001208
394 Ga0495640_0010034
395 Ga0495667_0029165
396 Ga0495634_0002112
397 Ga0495588_0011400
398 Ga0495657_0040062
399 Ga0495599_0074725
400 Ga0495647_0009425
401 Ga0495647_0029773
402 Ga0495658_0005293
403 Ga0495613_0011260
404 Ga0495600_0000554
405 Ga0495581_0004634
406 Ga0495581_0041798
407 Ga0495604_0154119
408 Ga0495674_0037163
409 Ga0495674_0127422
410 Ga0495676_0010828
411 Ga0495680_0052273
412 Ga0495684_0005578
413 Ga0495684_0133496
414 Ga0495593_0007051
415 Ga0495614_0002670
416 Ga0496102_0022751
417 Ga0496103_0013607
418 Ga0496104_0269693
419 Ga0496105_0030645
420 Ga0496106_0007330
421 Ga0496107_0000676
422 Ga0496108_0005789
423 Ga0496109_0005934
424 Ga0496109_0224127
425 Ga0496111_0001185
426 Ga0496112_0006970
427 Ga0496112_0248121
428 Ga0496113_0011156
429 Ga0496115_0007506
430 Ga0496115_0260865
431 Ga0496116_0026291
432 Ga0496122_0097665
433 Ga0501312_014302
434 Ga0501033_0111670
435 Ga0501034_0121040
436 Ga0501034_0162307
437 Ga0501037_0028009
438 Ga0501043_0134563
439 Ga0501047_0193020
440 Ga0501048_0226542
441 Ga0501068_0144579
442 Ga0501070_0360674
443 Ga0501071_0033114
444 Ga0501072_0038562
445 Ga0501072_0308842
446 Ga0501076_0045244
447 Ga0501217_005763
448 Ga0501079_0032169
449 Ga0501080_0020656
450 Ga0501035_0146574
451 Ga0501044_0440711
452 nmdc:mga06r32_122252_c1
453 nmdc:mga06r32_24744_c1
454 nmdc:mga08y16_655992_c1
455 nmdc:mga0n895_1093_c1
456 nmdc:mga08x19_19457_c1
457 Ga0495601_0013179
458 Ga0495601_0111568
459 Ga0495595_0048257
460 Ga0501084_0059625
461 2688069538
462 2587740815
463 2644427779
464 2687580858
465 2738817430
466 2745166719
467 2817618868
468 2857473560
469 2888580650
470 2889050695
471 2889418143
472 2904118615
473 2919426212
474 2920111356
475 2980187527
476 8057476848

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01008

IF-2B

Initiation factor 2 subunit family

72

362

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yrf-assembly1.cif.gz_A crystal structure of 5-methylthioribose 1-phosphate isomerase from bacillus subtilis complexed with sulfate ion 0.9482 14 355
1t9k-assembly1.cif.gz_A x-ray crystal structure of aif-2b alpha subunit-related translation initiation factor [thermotoga maritima] 0.9469 12 355
2yrf-assembly1.cif.gz_A crystal structure of 5-methylthioribose 1-phosphate isomerase from bacillus subtilis complexed with sulfate ion 0.9429 14 355
1t9k-assembly1.cif.gz_A x-ray crystal structure of aif-2b alpha subunit-related translation initiation factor [thermotoga maritima] 0.9389 12 355
2a0u-assembly1.cif.gz_B crystal structure of the eukaryotic initiation factor 2b from leishmania major at 2.1 a resolution 0.931 13 353
ID Description Score Start End Superfamily
1t5oD02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Translation initiation factor eif-2b; domain 2 0.9387 157 353 3.40.50.10470
2yvkB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Translation initiation factor eif-2b; domain 2 0.9381 157 355 3.40.50.10470
2yrfA01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);translation initiation factor eif-2b, domain 1 0.9335 14 154 1.20.120.420
af_A0A0P0XUJ0_201_333_3.40.50.10470 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Translation initiation factor eif-2b; domain 2 0.9328 149 287 3.40.50.10470
af_Q0ITU1_6_161_1.20.120.420 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);translation initiation factor eif-2b, domain 1 0.9264 11 156 1.20.120.420
ID Description Score Start End GO Terms
AF-X1P337-F1-model_v4 S-methyl-5-thioribose-1-phosphate isomerase 0.9686 130 300 GO:0019509
GO:0046523
AF-X1JKN6-F1-model_v4 S-methyl-5-thioribose-1-phosphate isomerase 0.9637 154 298 GO:0019509
GO:0046523
AF-A0A7W0JHT3-F1-model_v4 S-methyl-5-thioribose-1-phosphate isomerase 0.9566 13 194 GO:0019509
GO:0046523
AF-A0A7V3FDQ8-F1-model_v4 Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) 0.955 11 354 GO:0019509
GO:0046523
AF-A0A1F2U677-F1-model_v4 S-methyl-5-thioribose-1-phosphate isomerase 0.9547 39 354 GO:0019509
GO:0046523

Map