F351287

General Info

Members Datasets Scaffolds Average Seq Length
238 198 476 299

Family's Representative Sequence

Representative Sequence 3300046674|Ga0495588_0026413|Ga0495588_0026413_840_1865
Length 341
Sequence MDGPSNNGDVDRNWRLGRTRAAAVGSSDAHFIHERQTRKHPMKAVRFHSYGGPEVLKIEEVEMPEPGPGQVRIAVKAAGINPIDWKLRAGYMHEMMPLALPAGSGFDASGVIDAIGEGVSGVSVGDAVFGKGHHTMAEYAILQEWARKPDGLSHEEAAGFAVAIETAARIIDQVGVKPGQTLLVSGAAGGVGSAVIQLAKAAGIRTIGTASEPKHAYLRSLGALPTTYGPGLSERVAALAPEGVHAALDIAGSGVIPELVAITGDPSRVLSIADLSAPQYGAKTSFEPTESTKALADAAALFTAGSFTLPVEKAFPLDRIAAAHELSAQGRVTGRLIVTMG

Samples

Sample ID Description Type Environment
1 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
2 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
15 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
31 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
32 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
33 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
34 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
35 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
37 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
38 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
40 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
42 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
53 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
54 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
55 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
58 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
61 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
64 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
68 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
69 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
70 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
71 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
72 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
73 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
74 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
75 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
76 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
77 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
78 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
79 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
80 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
81 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
82 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
83 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
87 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
88 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
89 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
90 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
91 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
92 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
93 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
94 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
95 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
96 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
97 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
98 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
99 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
100 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
101 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
102 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
103 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
104 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
105 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
106 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
107 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
108 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
109 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
110 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
111 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
114 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
115 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
118 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
119 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
120 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
132 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
133 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
134 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
135 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
136 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
137 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
138 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
139 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
140 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
141 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
142 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
143 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
144 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
145 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
146 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
147 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
148 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
149 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
150 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
151 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
152 2547132181 Kosakonia sacchari SP1 Isolate Stem
153 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
154 2561511199 Enterobacter sp. R4-368 Isolate Nodule
155 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
156 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
157 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
158 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
159 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
160 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
161 2643221578 Streptomyces sp. Root63 Isolate Unclassified
162 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
163 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
164 2643221692 Nocardia sp. Root136 Isolate Unclassified
165 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
166 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
167 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
168 2808606448 Streptomyces sp. 193411 Isolate Unclassified
169 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
170 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
171 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
172 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
173 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
174 2867369537 Streptomyces sp. Z26 Isolate Unclassified
175 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
176 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
177 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
178 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
179 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
180 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
181 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
182 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
183 2928108538 Paraburkholderia terricola 1595 Isolate Rhizosphere
184 2928503688 Paraburkholderia terricola 1263 Isolate Rhizosphere
185 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
186 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
187 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
188 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
189 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
190 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
191 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
192 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
193 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
194 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
195 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
196 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
197 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
198 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.57
Metatranscriptomes 0
Isolates 21.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.47
Nodule 0.42
Rhizoplane 0.84
Rhizosphere 53.36
Stem 0.42
Stem Tuber 0
Unclassified 0.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495588_0026413 3300046674 Bacteria 2898
2 JGI25158J39367_1000312 3300002739 Bacteria 10928
3 JGI25152J39213_1003352 3300002773 Bacteria 5503
4 JGI25150J39212_1007706 3300002774 Bacteria 2148
5 JGI25159J45721_1001396 3300002987 Bacteria 10018
6 JGI25165J46597_1000312 3300003214 Bacteria 58626
7 JGI25153J46596_10000191 3300003215 Bacteria 59298
8 rootH2_10041282 3300003320 Bacteria 2158
9 JGI25160J50197_1000387 3300003354 Bacteria 28549
10 JGI25160J50197_1005828 3300003354 Bacteria 5071
11 JGI25160J50197_1006904 3300003354 Bacteria 4520
12 JGI25161J50226_1000150 3300003374 Bacteria 48475
13 Ga0055526_1001188 3300003771 Bacteria 18860
14 Ga0055524_1008341 3300003775 Bacteria 4310
15 Ga0055528_1006373 3300003790 Bacteria 5356
16 Ga0055540_1017514 3300003792 Bacteria 1997
17 Ga0055540_1020303 3300003792 Bacteria 1760
18 Ga0055543_1000074 3300004625 Bacteria 88424
19 Ga0065165_1058539 3300005262 Bacteria 1063
20 Ga0065165_1058541 3300005262 Bacteria 1063
21 Ga0070714_100096014 3300005435 Bacteria 2604
22 Ga0070665_100054269 3300005548 Bacteria 4019
23 Ga0068855_100009444 3300005563 Bacteria 11786
24 Ga0068855_100071694 3300005563 Bacteria 4027
25 Ga0068854_100000046 3300005578 Bacteria 91434
26 Ga0068856_100088282 3300005614 Bacteria 3083
27 Ga0068852_100117492 3300005616 Bacteria 2429
28 Ga0068852_100349554 3300005616 Bacteria 1443
29 Ga0075369_10006428 3300006186 Bacteria 4442
30 Ga0105240_10003911 3300009093 Bacteria 23011
31 Ga0105240_10013977 3300009093 Bacteria 10988
32 Ga0105240_10099642 3300009093 Bacteria 3536
33 Ga0105241_10024993 3300009174 Bacteria 4438
34 Ga0105241_10100859 3300009174 Bacteria 2295
35 Ga0105237_10011502 3300009545 Bacteria 9364
36 Ga0105237_10051165 3300009545 Bacteria 4150
37 Ga0105238_10004436 3300009551 Bacteria 13911
38 Ga0105238_10093556 3300009551 Bacteria 2994
39 Ga0105239_10025937 3300010375 Bacteria 6453
40 Ga0157378_10016204 3300013297 Bacteria 6528
41 Ga0209436_100011 3300025208 Bacteria 139405
42 Ga0209437_100122 3300025233 Bacteria 201364
43 Ga0207425_1005376 3300025245 Bacteria 3661
44 Ga0209129_1000244 3300025258 Bacteria 57688
45 Ga0209129_1000515 3300025258 Bacteria 27636
46 Ga0209129_1001256 3300025258 Bacteria 14547
47 Ga0209129_1012378 3300025258 Bacteria 1962
48 Ga0209233_1000170 3300025261 Bacteria 147527
49 Ga0209233_1000405 3300025261 Bacteria 34803
50 Ga0209673_1003578 3300025273 Bacteria 9051
51 Ga0209130_1000066 3300025284 Bacteria 192626
52 Ga0209025_1000667 3300025294 Bacteria 59351
53 Ga0209025_1024048 3300025294 Bacteria 3160
54 Ga0209564_1000225 3300025295 Bacteria 126209
55 Ga0209758_1000552 3300025297 Bacteria 59351
56 Ga0209758_1001087 3300025297 Bacteria 35294
57 Ga0209758_1003828 3300025297 Bacteria 13214
58 Ga0209758_1009468 3300025297 Bacteria 6046
59 Ga0209256_1001796 3300025299 Bacteria 20243
60 Ga0207426_1000008 3300025302 Bacteria 848730
61 Ga0207426_1000593 3300025302 Bacteria 47865
62 Ga0207426_1003650 3300025302 Bacteria 8126
63 Ga0207426_1006033 3300025302 Bacteria 5354
64 Ga0207426_1024875 3300025302 Bacteria 2025
65 Ga0209051_1004929 3300025303 Bacteria 7986
66 Ga0209257_1027743 3300025304 Bacteria 1878
67 Ga0207647_10009534 3300025904 Bacteria 6890
68 Ga0207654_10035295 3300025911 Bacteria 2785
69 Ga0207654_10262830 3300025911 Bacteria 1161
70 Ga0207695_10004467 3300025913 Bacteria 19050
71 Ga0207695_10007545 3300025913 Bacteria 13789
72 Ga0207695_10127947 3300025913 Bacteria 2500
73 Ga0207671_10000809 3300025914 Bacteria 39526
74 Ga0207671_10008171 3300025914 Bacteria 8927
75 Ga0207694_10004141 3300025924 Bacteria 11387
76 Ga0207694_10079347 3300025924 Bacteria 2574
77 Ga0207667_10000040 3300025949 Bacteria 275827
78 Ga0207667_10069080 3300025949 Bacteria 3678
79 Ga0207640_10000009 3300025981 Bacteria 283101
80 Ga0207702_10030967 3300026078 Bacteria 4459
81 Ga0307515_10000510 3300028794 Bacteria 92702
82 Ga0265339_10099569 3300031249 Bacteria 1515
83 Ga0307513_10218633 3300031456 Bacteria 1728
84 Ga0307508_10067279 3300031616 Bacteria 3151
85 Ga0265314_10101606 3300031711 Bacteria 1847
86 Ga0265342_10004120 3300031712 Bacteria 11575
87 Ga0307518_10001182 3300031838 Bacteria 19605
88 Ga0307410_10119497 3300031852 Bacteria 1920
89 Ga0307406_10069749 3300031901 Unclassified 2299
90 Ga0373934_0038052 3300035086 Bacteria 1894
91 Ga0395900_0116126 3300037418 Bacteria 2746
92 Ga0395898_0015739 3300037466 Bacteria 7751
93 Ga0395905_0228064 3300037471 Bacteria 1742
94 Ga0436364_1186213 3300037853 Bacteria 1600
95 Ga0395901_0042345 3300038443 Bacteria 4721
96 Ga0439465_0003454 3300041413 Bacteria 5154
97 Ga0451833_0144902 3300041491 Bacteria 6822
98 Ga0451835_1226919 3300041492 Bacteria 14458
99 Ga0451839_0954590 3300041496 Bacteria 1557
100 Ga0451841_0004997 3300041498 Bacteria 3306
101 Ga0451845_0034096 3300041501 Bacteria 9957
102 Ga0451847_0552283 3300041503 Bacteria 1787
103 Ga0451851_0932822 3300041507 Bacteria 14112
104 Ga0451853_3602258 3300041512 Bacteria 4724
105 Ga0450919_001983 3300042121 Bacteria 2657
106 Ga0450918_001309 3300042531 Bacteria 5025
107 Ga0466969_0020384 3300044656 Bacteria 3435
108 Ga0466966_0002741 3300044684 Bacteria 11564
109 Ga0466961_0119277 3300044693 Bacteria 1657
110 Ga0466963_0003713 3300044694 Bacteria 8780
111 Ga0466971_0016129 3300044719 Bacteria 3291
112 Ga0466970_0010746 3300044765 Bacteria 4653
113 Ga0466970_0042500 3300044765 Bacteria 2417
114 Ga0466957_0023388 3300044842 Bacteria 3654
115 Ga0466959_0020032 3300045049 Bacteria 4924
116 Ga0466958_0034228 3300045836 Bacteria 3030
117 Ga0495617_000587 3300046452 Bacteria 18541
118 Ga0495592_0058618 3300046454 Bacteria 2839
119 Ga0495592_0376152 3300046454 Bacteria 905
120 Ga0495590_0030675 3300046457 Bacteria 1884
121 Ga0495629_0270188 3300046459 Bacteria 1168
122 Ga0495651_0002900 3300046462 Bacteria 13279
123 Ga0495585_0000001 3300046492 Bacteria 609804
124 Ga0495585_0065253 3300046492 Bacteria 1995
125 Ga0495583_0001833 3300046506 Bacteria 19816
126 Ga0495583_0118998 3300046506 Bacteria 1113
127 Ga0495610_0043279 3300046512 Bacteria 2245
128 Ga0495631_0000115 3300046518 Bacteria 53939
129 Ga0495648_0003098 3300046524 Bacteria 14841
130 Ga0495652_0024992 3300046529 Bacteria 5286
131 Ga0495645_0011669 3300046543 Bacteria 6186
132 Ga0495645_0193723 3300046543 Bacteria 1383
133 Ga0495645_0341226 3300046543 Bacteria 967
134 Ga0495622_0039269 3300046557 Bacteria 2204
135 Ga0495633_0000466 3300046558 Bacteria 41439
136 Ga0495668_0027720 3300046616 Bacteria 3210
137 Ga0495634_0015134 3300046642 Bacteria 5545
138 Ga0495625_0004280 3300046660 Bacteria 13579
139 Ga0495661_0000424 3300046665 Bacteria 44598
140 Ga0495588_0052335 3300046674 Bacteria 2104
141 Ga0495646_0162637 3300046680 Bacteria 1234
142 Ga0495658_0015488 3300046683 Bacteria 3912
143 Ga0495600_0011828 3300046809 Bacteria 5450
144 Ga0495604_0013989 3300047317 Bacteria 6400
145 Ga0495604_0051408 3300047317 Bacteria 3195
146 Ga0495676_0000540 3300047321 Bacteria 31009
147 Ga0495686_0063991 3300047472 Bacteria 2278
148 Ga0495593_0002477 3300047673 Bacteria 11107
149 Ga0495602_0219368 3300048088 Bacteria 1437
150 Ga0495614_0003222 3300048089 Bacteria 7292
151 Ga0496106_0000038 3300048909 Bacteria 111983
152 Ga0496117_0016019 3300048920 Bacteria 6350
153 Ga0496118_0014188 3300048921 Bacteria 7472
154 Ga0496121_0134475 3300048924 Bacteria 1844
155 Ga0496121_0191164 3300048924 Bacteria 1467
156 Ga0496122_0033925 3300048925 Bacteria 4188
157 Ga0496124_0018000 3300048927 Bacteria 6636
158 Ga0496125_0069206 3300048928 Bacteria 2771
159 Ga0496126_0004917 3300048929 Bacteria 15599
160 Ga0495682_0000228 3300049460 Bacteria 44109
161 Ga0501031_0001501 3300049568 Bacteria 14533
162 Ga0501033_0052372 3300049570 Bacteria 3025
163 Ga0501033_0145861 3300049570 Bacteria 1709
164 Ga0501034_0535264 3300049571 Bacteria 1082
165 Ga0501036_0011631 3300049572 Bacteria 7294
166 Ga0501037_0042763 3300049573 Bacteria 3330
167 Ga0501038_0342727 3300049574 Bacteria 1165
168 Ga0501039_0357724 3300049575 Bacteria 1147
169 Ga0501070_0341211 3300049586 Bacteria 1217
170 Ga0500610_0000110 3300053079 Bacteria 24846
171 Ga0500578_0179523 3300053086 Bacteria 1305
172 Ga0500643_048934 3300053087 Bacteria 1214
173 Ga0500651_0035318 3300053093 Bacteria 3151
174 Ga0500566_0009335 3300053094 Bacteria 5800
175 Ga0500571_000014 3300053110 Bacteria 67097
176 Ga0500572_000325 3300053111 Bacteria 17063
177 Ga0500608_044770 3300053122 Bacteria 2125
178 Ga0500618_043486 3300053125 Bacteria 1027
179 Ga0500559_0003644 3300053136 Bacteria 7529
180 Ga0500564_029320 3300053138 Bacteria 2535
181 Ga0500568_0000280 3300053139 Bacteria 42298
182 Ga0500574_003324 3300053141 Bacteria 2823
183 Ga0500622_0000170 3300053156 Bacteria 70088
184 Ga0500633_0000432 3300053160 Bacteria 6576
185 Ga0500636_0009751 3300053177 Bacteria 5593
186 Ga0500645_002145 3300053730 Bacteria 9061
187 Ga0500596_004247 3300053735 Bacteria 2650
188 2511195863 2510917030 Bacteria 7460662
189 2523469369 2523231067 Bacteria 5230452
190 2547410134 2547132111 Bacteria 8013147
191 2547694912 2547132181 Bacteria 4945084
192 2558907292 2558860112 Bacteria 9931328
193 2562466931 2561511199 Bacteria 5155034
194 2585226621 2582581298 Bacteria 7315509
195 2585549695 2585427529 Bacteria 7395659
196 2585908634 2585427609 Bacteria 6667127
197 2586061034 2585427649 Bacteria 9053857
198 2587984053 2585428125 Bacteria 6662905
199 2616906096 2616644941 Bacteria 8510691
200 2643897771 2643221578 Bacteria 9213798
201 2644249073 2643221644 Bacteria 6865017
202 2644408917 2643221673 Bacteria 9196637
203 2644516774 2643221692 Bacteria 7282860
204 2760304012 2758568522 Bacteria 5953541
205 2784588971 2784132148 Bacteria 8627943
206 2793981056 2791355406 Bacteria 11364898
207 2809232572 2808606448 Bacteria 8656184
208 2809589933 2808606522 Bacteria 9488490
209 2813727255 2811995292 Bacteria 5303342
210 2814694788 2814123068 Bacteria 5687681
211 2819746543 2818991472 Bacteria 10089953
212 2862183324 2862178590 Bacteria 8583590
213 2867370033 2867369537 Bacteria 6501581
214 2873152005 2873151551 Bacteria 8625867
215 2882636037 2882632389 Bacteria 8154593
216 2891403048 2891395885 Bacteria 9251614
217 2899365023 2899359706 Bacteria 10940472
218 2912728076 2912723979 Bacteria 8557534
219 2915775709 2915768154 Bacteria 8424322
220 2919106126 2919100787 Bacteria 7710546
221 2919719444 2919713450 Bacteria 7431245
222 2928114991 2928108538 Bacteria 7360024
223 2928504448 2928503688 Bacteria 7268108
224 2946050965 2946045630 Bacteria 8527308
225 2990050277 2990044586 Bacteria 6603797
226 3005448153 3005445848 Bacteria 6906074
227 8023630458 8023623736 Bacteria 8593882
228 8047719285 8047710418 Bacteria 11023148
229 8047894953 8047893842 Bacteria 11723082
230 8048131486 8048127548 Bacteria 11053136
231 8048136840 8048127548 Bacteria 11053136
232 8048364097 8048356638 Bacteria 11044339
233 8048371980 8048369669 Bacteria 11666822
234 8048380914 8048379754 Bacteria 11877923
235 8053951864 8053945823 Bacteria 8962862
236 8054164418 8054160619 Bacteria 7783213
237 8056210289 8056207758 Bacteria 8639239
238 8056451300 8056447290 Bacteria 7680491
239 Ga0495588_0026413
240 JGI25158J39367_1000312
241 JGI25152J39213_1003352
242 JGI25150J39212_1007706
243 JGI25159J45721_1001396
244 JGI25165J46597_1000312
245 JGI25153J46596_10000191
246 rootH2_10041282
247 JGI25160J50197_1000387
248 JGI25160J50197_1005828
249 JGI25160J50197_1006904
250 JGI25161J50226_1000150
251 Ga0055526_1001188
252 Ga0055524_1008341
253 Ga0055528_1006373
254 Ga0055540_1017514
255 Ga0055540_1020303
256 Ga0055543_1000074
257 Ga0065165_1058539
258 Ga0065165_1058541
259 Ga0070714_100096014
260 Ga0070665_100054269
261 Ga0068855_100009444
262 Ga0068855_100071694
263 Ga0068854_100000046
264 Ga0068856_100088282
265 Ga0068852_100117492
266 Ga0068852_100349554
267 Ga0075369_10006428
268 Ga0105240_10003911
269 Ga0105240_10013977
270 Ga0105240_10099642
271 Ga0105241_10024993
272 Ga0105241_10100859
273 Ga0105237_10011502
274 Ga0105237_10051165
275 Ga0105238_10004436
276 Ga0105238_10093556
277 Ga0105239_10025937
278 Ga0157378_10016204
279 Ga0209436_100011
280 Ga0209437_100122
281 Ga0207425_1005376
282 Ga0209129_1000244
283 Ga0209129_1000515
284 Ga0209129_1001256
285 Ga0209129_1012378
286 Ga0209233_1000170
287 Ga0209233_1000405
288 Ga0209673_1003578
289 Ga0209130_1000066
290 Ga0209025_1000667
291 Ga0209025_1024048
292 Ga0209564_1000225
293 Ga0209758_1000552
294 Ga0209758_1001087
295 Ga0209758_1003828
296 Ga0209758_1009468
297 Ga0209256_1001796
298 Ga0207426_1000008
299 Ga0207426_1000593
300 Ga0207426_1003650
301 Ga0207426_1006033
302 Ga0207426_1024875
303 Ga0209051_1004929
304 Ga0209257_1027743
305 Ga0207647_10009534
306 Ga0207654_10035295
307 Ga0207654_10262830
308 Ga0207695_10004467
309 Ga0207695_10007545
310 Ga0207695_10127947
311 Ga0207671_10000809
312 Ga0207671_10008171
313 Ga0207694_10004141
314 Ga0207694_10079347
315 Ga0207667_10000040
316 Ga0207667_10069080
317 Ga0207640_10000009
318 Ga0207702_10030967
319 Ga0307515_10000510
320 Ga0265339_10099569
321 Ga0307513_10218633
322 Ga0307508_10067279
323 Ga0265314_10101606
324 Ga0265342_10004120
325 Ga0307518_10001182
326 Ga0307410_10119497
327 Ga0307406_10069749
328 Ga0373934_0038052
329 Ga0395900_0116126
330 Ga0395898_0015739
331 Ga0395905_0228064
332 Ga0436364_1186213
333 Ga0395901_0042345
334 Ga0439465_0003454
335 Ga0451833_0144902
336 Ga0451835_1226919
337 Ga0451839_0954590
338 Ga0451841_0004997
339 Ga0451845_0034096
340 Ga0451847_0552283
341 Ga0451851_0932822
342 Ga0451853_3602258
343 Ga0450919_001983
344 Ga0450918_001309
345 Ga0466969_0020384
346 Ga0466966_0002741
347 Ga0466961_0119277
348 Ga0466963_0003713
349 Ga0466971_0016129
350 Ga0466970_0010746
351 Ga0466970_0042500
352 Ga0466957_0023388
353 Ga0466959_0020032
354 Ga0466958_0034228
355 Ga0495617_000587
356 Ga0495592_0058618
357 Ga0495592_0376152
358 Ga0495590_0030675
359 Ga0495629_0270188
360 Ga0495651_0002900
361 Ga0495585_0000001
362 Ga0495585_0065253
363 Ga0495583_0001833
364 Ga0495583_0118998
365 Ga0495610_0043279
366 Ga0495631_0000115
367 Ga0495648_0003098
368 Ga0495652_0024992
369 Ga0495645_0011669
370 Ga0495645_0193723
371 Ga0495645_0341226
372 Ga0495622_0039269
373 Ga0495633_0000466
374 Ga0495668_0027720
375 Ga0495634_0015134
376 Ga0495625_0004280
377 Ga0495661_0000424
378 Ga0495588_0052335
379 Ga0495646_0162637
380 Ga0495658_0015488
381 Ga0495600_0011828
382 Ga0495604_0013989
383 Ga0495604_0051408
384 Ga0495676_0000540
385 Ga0495686_0063991
386 Ga0495593_0002477
387 Ga0495602_0219368
388 Ga0495614_0003222
389 Ga0496106_0000038
390 Ga0496117_0016019
391 Ga0496118_0014188
392 Ga0496121_0134475
393 Ga0496121_0191164
394 Ga0496122_0033925
395 Ga0496124_0018000
396 Ga0496125_0069206
397 Ga0496126_0004917
398 Ga0495682_0000228
399 Ga0501031_0001501
400 Ga0501033_0052372
401 Ga0501033_0145861
402 Ga0501034_0535264
403 Ga0501036_0011631
404 Ga0501037_0042763
405 Ga0501038_0342727
406 Ga0501039_0357724
407 Ga0501070_0341211
408 Ga0500610_0000110
409 Ga0500578_0179523
410 Ga0500643_048934
411 Ga0500651_0035318
412 Ga0500566_0009335
413 Ga0500571_000014
414 Ga0500572_000325
415 Ga0500608_044770
416 Ga0500618_043486
417 Ga0500559_0003644
418 Ga0500564_029320
419 Ga0500568_0000280
420 Ga0500574_003324
421 Ga0500622_0000170
422 Ga0500633_0000432
423 Ga0500636_0009751
424 Ga0500645_002145
425 Ga0500596_004247
426 2511195863
427 2523469369
428 2547410134
429 2547694912
430 2558907292
431 2562466931
432 2585226621
433 2585549695
434 2585908634
435 2586061034
436 2587984053
437 2616906096
438 2643897771
439 2644249073
440 2644408917
441 2644516774
442 2760304012
443 2784588971
444 2793981056
445 2809232572
446 2809589933
447 2813727255
448 2814694788
449 2819746543
450 2862183324
451 2867370033
452 2873152005
453 2882636037
454 2891403048
455 2899365023
456 2912728076
457 2915775709
458 2919106126
459 2919719444
460 2928114991
461 2928504448
462 2946050965
463 2990050277
464 3005448153
465 8023630458
466 8047719285
467 8047894953
468 8048131486
469 8048136840
470 8048364097
471 8048371980
472 8048380914
473 8053951864
474 8054164418
475 8056210289
476 8056451300

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

190

273

0.88

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

67

162

0.85

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

231

338

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
5a3j-assembly8.cif.gz_H crystal structure of the chloroplastic gamma-ketol reductase from arabidopsis thaliana bound to 13-oxo-9(z),11(e),15(z)- octadecatrienoic acid. 0.8786 1 288
5a3j-assembly8.cif.gz_H crystal structure of the chloroplastic gamma-ketol reductase from arabidopsis thaliana bound to 13-oxo-9(z),11(e),15(z)- octadecatrienoic acid. 0.8757 1 288
6k9y-assembly2.cif.gz_D crystal structure of human vat-1 0.8688 1 288
6k9y-assembly2.cif.gz_D crystal structure of human vat-1 0.866 1 288
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.8633 1 288
ID Description Score Start End Superfamily
af_Q869N3_132_238_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.8799 110 206 3.90.180.10
af_Q5ANC5_183_328_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8766 123 211 3.40.50.720
af_A0A0P0W924_57_358_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.8723 18 285 3.90.180.10
af_O74489_1_324_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8675 2 286 3.40.50.300
af_Q80TB8_38_380_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.867 1 286 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A227J0B0-F1-model_v4 NADPH:quinone reductase 0.9712 94 176
AF-A0A4R2FBI4-F1-model_v4 NADPH:quinone reductase-like Zn-dependent oxidoreductase 0.9625 1 287 GO:0016491
AF-A0A7Y6A7J7-F1-model_v4 Zinc-binding dehydrogenase 0.9574 138 288 GO:0016651
GO:0070402
AF-A0A8A3TEI6-F1-model_v4 deleted 0.9559 58 288
AF-A0A4R2FBI4-F1-model_v4 NADPH:quinone reductase-like Zn-dependent oxidoreductase 0.9559 1 287 GO:0016491

Map