F351241

General Info

Members Datasets Scaffolds Average Seq Length
238 158 229 324

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0007453|Ga0495638_0007453_3766_4878
Length 370
Sequence VTDAQALGNPCLHAAAWNIRAARQFRRRQPQEASMPDVETPQFEPAANRAAQAERDIQAPLDAKEERSFQDGGQKQEKPAMQAGARPYPAPPFPEQHQAKPGIEARLDPAPMYDAPFYKGSGKLEGKVALITGADSGIGRAVAVLFAREGADVAIAYLDEELDAVETRAAVEREGRRAILLPGDVADPAYAKAAVERTVKELGKLDVLVNNAAFQEHVTAFEDLTPEHFDRTLKTNLYGYFHMAQAAVKVIPPGGAIINTGSVTGMLGAKNLLDYSLTKGGIHAFTRSLATHLVDKGIRVNAVAPGPVWTPLNPADKLAPQVAQFGGQTPMKRPAQPEEIAPAYVFLASPQTSSYITGEVLPIIGGYSGG

Samples

Sample ID Description Type Environment
1 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
2 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
3 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
4 2643221584 Caulobacter sp. Root656 Isolate Unclassified
5 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
6 2818991435 Caulobacter henricii 536 Isolate Unclassified
7 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
8 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
9 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
20 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
21 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
51 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
76 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
89 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
90 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
91 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
92 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
93 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
94 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
95 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
96 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
97 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
98 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
99 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
100 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
101 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
102 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
103 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
104 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
105 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
106 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
107 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
108 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
109 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
121 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
122 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
132 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
137 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
138 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
139 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
140 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
141 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
142 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
143 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
144 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
145 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
146 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
147 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
148 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
149 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
150 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
153 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
154 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
155 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
156 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.22
Metatranscriptomes 0
Isolates 3.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.63
Nodule 0
Rhizoplane 0.42
Rhizosphere 68.07
Stem 0
Stem Tuber 0
Unclassified 5.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055526_1019007 3300003771 Bacteria 2526
2 Ga0055537_1000904 3300003773 Bacteria 14000
3 Ga0055524_1003180 3300003775 Bacteria 8071
4 Ga0055528_1010951 3300003790 Bacteria 3639
5 Ga0055530_10000559 3300003791 Bacteria 32231
6 Ga0055531_10001988 3300003794 Bacteria 14208
7 Ga0055531_10011709 3300003794 Bacteria 4198
8 Ga0065165_1000277 3300005262 Bacteria 87540
9 Ga0065165_1001156 3300005262 Bacteria 30809
10 Ga0070658_10254307 3300005327 Bacteria 1491
11 Ga0070670_100082357 3300005331 Bacteria 2765
12 Ga0068869_100045849 3300005334 Bacteria 3149
13 Ga0070680_100002234 3300005336 Bacteria 14284
14 Ga0070680_100156714 3300005336 Bacteria 1913
15 Ga0070691_10116584 3300005341 Bacteria 1341
16 Ga0070673_100033214 3300005364 Bacteria 3893
17 Ga0070688_100104242 3300005365 Bacteria 1875
18 Ga0070678_100209788 3300005456 Bacteria 1613
19 Ga0070681_10028089 3300005458 Bacteria 5656
20 Ga0070681_10053614 3300005458 Bacteria 4019
21 Ga0070681_10092063 3300005458 Bacteria 2981
22 Ga0070679_100007045 3300005530 Bacteria 10485
23 Ga0070679_100063437 3300005530 Bacteria 3683
24 Ga0068853_100020318 3300005539 Bacteria 5522
25 Ga0068853_100055537 3300005539 Bacteria 3414
26 Ga0068853_100095740 3300005539 Bacteria 2618
27 Ga0070665_100000327 3300005548 Bacteria 73382
28 Ga0068855_100031903 3300005563 Bacteria 6289
29 Ga0068855_100082473 3300005563 Bacteria 3726
30 Ga0068857_100164398 3300005577 Bacteria 2015
31 Ga0068862_100302394 3300005844 Bacteria 1472
32 Ga0070717_10023121 3300006028 Bacteria 4920
33 Ga0075365_10018266 3300006038 Bacteria 4310
34 Ga0075363_100000667 3300006048 Bacteria 11467
35 Ga0075363_100033013 3300006048 Bacteria 2693
36 Ga0075367_10000089 3300006178 Bacteria 24868
37 Ga0075367_10033136 3300006178 Bacteria 2976
38 Ga0075367_10092878 3300006178 Bacteria 1837
39 Ga0075367_10096058 3300006178 Bacteria 1807
40 Ga0075369_10000553 3300006186 Bacteria 11817
41 Ga0075369_10011705 3300006186 Bacteria 3455
42 Ga0097621_100013897 3300006237 Bacteria 6013
43 Ga0075370_10000777 3300006353 Bacteria 12783
44 Ga0068871_100034531 3300006358 Bacteria 4013
45 Ga0105240_10001061 3300009093 Bacteria 48640
46 Ga0105240_10031757 3300009093 Bacteria 6843
47 Ga0105240_10095475 3300009093 Bacteria 3625
48 Ga0105240_10095597 3300009093 Bacteria 3622
49 Ga0105241_10143057 3300009174 Bacteria 1950
50 Ga0105241_10314999 3300009174 Bacteria 1347
51 Ga0105238_10069546 3300009551 Bacteria 3521
52 Ga0157370_10281276 3300013104 Bacteria 1537
53 Ga0157374_10068847 3300013296 Bacteria 3331
54 Ga0157378_10115481 3300013297 Bacteria 2467
55 Ga0157378_10377087 3300013297 Bacteria 1392
56 Ga0163162_10182056 3300013306 Bacteria 2227
57 Ga0157372_10184183 3300013307 Bacteria 2418
58 Ga0183365_10001 3300015684 Bacteria 2090444
59 Ga0213875_10076965 3300021388 Bacteria 1557
60 Ga0209026_1001597 3300025250 Bacteria 9721
61 Ga0209565_1000280 3300025263 Bacteria 51034
62 Ga0209673_1002255 3300025273 Bacteria 13894
63 Ga0209564_1004179 3300025295 Bacteria 9013
64 Ga0209564_1014811 3300025295 Bacteria 3215
65 Ga0209758_1000920 3300025297 Bacteria 39827
66 Ga0209758_1009419 3300025297 Bacteria 6076
67 Ga0209050_1000200 3300025298 Bacteria 134115
68 Ga0209256_1001877 3300025299 Bacteria 19375
69 Ga0209256_1004997 3300025299 Bacteria 7936
70 Ga0209257_1000066 3300025304 Bacteria 344166
71 Ga0209257_1000225 3300025304 Bacteria 134023
72 Ga0207705_10000424 3300025909 Bacteria 36897
73 Ga0207707_10045313 3300025912 Bacteria 3833
74 Ga0207707_10083321 3300025912 Bacteria 2792
75 Ga0207695_10000939 3300025913 Bacteria 51994
76 Ga0207695_10002233 3300025913 Bacteria 29071
77 Ga0207695_10293286 3300025913 Bacteria 1518
78 Ga0207660_10002157 3300025917 Bacteria 13058
79 Ga0207660_10083646 3300025917 Bacteria 2351
80 Ga0207657_10000735 3300025919 Bacteria 34755
81 Ga0207649_10000029 3300025920 Bacteria 156557
82 Ga0207652_10074159 3300025921 Bacteria 2962
83 Ga0207652_10186887 3300025921 Bacteria 1863
84 Ga0207694_10203332 3300025924 Bacteria 1612
85 Ga0207694_10231450 3300025924 Bacteria 1509
86 Ga0207650_10156208 3300025925 Bacteria 1804
87 Ga0207667_10020497 3300025949 Bacteria 7350
88 Ga0207667_10162771 3300025949 Bacteria 2294
89 Ga0207667_10247515 3300025949 Bacteria 1824
90 Ga0207667_10298713 3300025949 Bacteria 1645
91 Ga0207651_10021787 3300025960 Bacteria 3903
92 Ga0207639_10124389 3300026041 Bacteria 2124
93 Ga0207676_10148967 3300026095 Bacteria 2013
94 Ga0207674_10096093 3300026116 Bacteria 2948
95 Ga0209813_10001766 3300027866 Bacteria 4868
96 Ga0268266_10000064 3300028379 Bacteria 249533
97 Ga0268265_10061217 3300028380 Bacteria 2888
98 Ga0307515_10156162 3300028794 Bacteria 2353
99 Ga0265331_10000763 3300031250 Bacteria 26867
100 Ga0265327_10000153 3300031251 Bacteria 149004
101 Ga0265327_10000456 3300031251 Bacteria 73362
102 Ga0265314_10140065 3300031711 Bacteria 1496
103 Ga0307410_10270619 3300031852 Bacteria 1329
104 Ga0307406_10160437 3300031901 Bacteria 1616
105 Ga0307414_10138793 3300032004 Bacteria 1900
106 Ga0307411_10271853 3300032005 Bacteria 1344
107 Ga0373941_0006520 3300035115 Bacteria 2816
108 Ga0395900_0232284 3300037418 Bacteria 1854
109 Ga0395905_0026806 3300037471 Bacteria 5435
110 Ga0395905_0050057 3300037471 Bacteria 3915
111 Ga0395905_0112343 3300037471 Bacteria 2559
112 Ga0395905_0317350 3300037471 Bacteria 1448
113 Ga0436364_1362276 3300037853 Bacteria 1560
114 Ga0395901_0074072 3300038443 Bacteria 3552
115 Ga0395901_0378137 3300038443 Bacteria 1458
116 Ga0395901_0674349 3300038443 Bacteria 1034
117 Ga0495617_022387 3300046452 Bacteria 2136
118 Ga0495590_0000894 3300046457 Bacteria 13347
119 Ga0495638_0000963 3300046460 Bacteria 29134
120 Ga0495638_0001122 3300046460 Bacteria 25994
121 Ga0495638_0001193 3300046460 Bacteria 24877
122 Ga0495638_0007453 3300046460 Bacteria 7843
123 Ga0495638_0032006 3300046460 Bacteria 3375
124 Ga0495606_0003511 3300046507 Bacteria 16580
125 Ga0495610_0000218 3300046512 Bacteria 61777
126 Ga0495610_0001203 3300046512 Bacteria 23372
127 Ga0495616_0003631 3300046513 Bacteria 9858
128 Ga0495632_0010176 3300046519 Bacteria 5591
129 Ga0495632_0088849 3300046519 Bacteria 1467
130 Ga0495637_0006111 3300046520 Bacteria 6060
131 Ga0495668_0004296 3300046616 Bacteria 10212
132 Ga0495668_0049822 3300046616 Bacteria 2322
133 Ga0495625_0000165 3300046660 Bacteria 102988
134 Ga0495625_0002840 3300046660 Bacteria 18199
135 Ga0495660_0049857 3300046810 Bacteria 2283
136 Ga0495672_0001176 3300047320 Bacteria 26541
137 Ga0495683_0017843 3300047323 Bacteria 3675
138 Ga0495679_011481 3300047446 Bacteria 3418
139 Ga0495673_0001209 3300047469 Bacteria 21505
140 Ga0495686_0002771 3300047472 Bacteria 15995
141 Ga0495686_0078162 3300047472 Bacteria 2025
142 Ga0496110_0452244 3300048913 Bacteria 1170
143 Ga0496122_0001509 3300048925 Bacteria 37119
144 Ga0496123_0000950 3300048926 Bacteria 45086
145 Ga0496126_0001616 3300048929 Bacteria 34122
146 Ga0495678_001349 3300049459 Bacteria 19645
147 Ga0501031_0082285 3300049568 Bacteria 2099
148 Ga0501031_0086260 3300049568 Bacteria 2047
149 Ga0501032_0027492 3300049569 Bacteria 3909
150 Ga0501033_0000389 3300049570 Bacteria 42230
151 Ga0501033_0004619 3300049570 Bacteria 11026
152 Ga0501034_0006897 3300049571 Bacteria 12140
153 Ga0501034_0051744 3300049571 Bacteria 4141
154 Ga0501036_0110228 3300049572 Bacteria 2326
155 Ga0501037_0201089 3300049573 Bacteria 1408
156 Ga0501040_0031378 3300049576 Bacteria 3591
157 Ga0501043_0004584 3300049579 Bacteria 11211
158 Ga0501043_0042923 3300049579 Bacteria 3555
159 Ga0501043_0172930 3300049579 Bacteria 1685
160 Ga0501046_0002615 3300049580 Bacteria 16818
161 Ga0501046_0020247 3300049580 Bacteria 5506
162 Ga0501047_0002290 3300049581 Bacteria 18318
163 Ga0501047_0009256 3300049581 Bacteria 9301
164 Ga0501047_0056146 3300049581 Bacteria 3807
165 Ga0501047_0241240 3300049581 Bacteria 1658
166 Ga0501070_0014689 3300049586 Bacteria 6588
167 Ga0501070_0168966 3300049586 Bacteria 1801
168 Ga0501070_0196949 3300049586 Bacteria 1655
169 Ga0501072_0034971 3300049588 Bacteria 3938
170 Ga0501073_0028883 3300049589 Bacteria 3963
171 Ga0501073_0034362 3300049589 Bacteria 3609
172 Ga0501075_0285475 3300049591 Bacteria 1257
173 Ga0501076_0026734 3300049592 Bacteria 4473
174 Ga0501077_0018046 3300049593 Bacteria 4460
175 Ga0501077_0019344 3300049593 Bacteria 4307
176 Ga0501079_0018252 3300049741 Bacteria 5359
177 Ga0501080_0036947 3300049742 Bacteria 4560
178 Ga0501080_0039077 3300049742 Bacteria 4429
179 Ga0501080_0085097 3300049742 Bacteria 2938
180 Ga0501080_0143914 3300049742 Bacteria 2204
181 Ga0501081_0036066 3300049743 Bacteria 3370
182 Ga0501083_0013872 3300049744 Bacteria 5634
183 Ga0501083_0024193 3300049744 Bacteria 4210
184 Ga0501083_0042422 3300049744 Bacteria 3084
185 Ga0501035_0016357 3300049822 Bacteria 6841
186 Ga0501035_0053447 3300049822 Bacteria 3612
187 Ga0501035_0080677 3300049822 Bacteria 2872
188 Ga0501035_0287740 3300049822 Bacteria 1387
189 Ga0501044_0000906 3300049823 Bacteria 35624
190 Ga0501044_0005854 3300049823 Bacteria 13618
191 Ga0501044_0164633 3300049823 Bacteria 2192
192 Ga0501044_0451650 3300049823 Bacteria 1192
193 nmdc:mga03683_29928_c1 3300050489 Bacteria 2175
194 nmdc:mga03683_39508_c1 3300050489 Bacteria 1932
195 nmdc:mga03683_75751_c1 3300050489 Bacteria 1445
196 nmdc:mga03n38_8467_c1 3300050490 Bacteria 3693
197 nmdc:mga00v17_8467_c1 3300050491 Bacteria 5536
198 nmdc:mga0yw44_3220_c1 3300050492 Bacteria 7189
199 nmdc:mga0yw44_3370_c1 3300050492 Bacteria 7087
200 nmdc:mga06z11_125471_c1 3300050494 Bacteria 1436
201 nmdc:mga04h51_28452_c1 3300050495 Bacteria 1744
202 nmdc:mga0sz30_15445_c1 3300050516 Bacteria 3017
203 Ga0500635_0006483 3300053080 Bacteria 3128
204 Ga0500578_0000080 3300053086 Bacteria 106387
205 Ga0500644_0014276 3300053088 Bacteria 2238
206 Ga0500647_0003906 3300053091 Bacteria 5897
207 Ga0500554_001284 3300053102 Bacteria 4867
208 Ga0500556_0000830 3300053104 Bacteria 17803
209 Ga0500562_001106 3300053108 Bacteria 6626
210 Ga0500594_0000143 3300053118 Bacteria 19524
211 Ga0500608_000099 3300053122 Bacteria 35321
212 Ga0500618_000195 3300053125 Bacteria 49434
213 Ga0500658_0001104 3300053134 Bacteria 11041
214 Ga0500559_0000024 3300053136 Bacteria 126300
215 Ga0500559_0009254 3300053136 Bacteria 4276
216 Ga0500568_0000005 3300053139 Bacteria 614296
217 Ga0500568_0088096 3300053139 Bacteria 1173
218 Ga0500616_0000962 3300053153 Bacteria 31215
219 Ga0500622_0005394 3300053156 Bacteria 7693
220 Ga0500645_001427 3300053730 Bacteria 12143
221 Ga0500645_001687 3300053730 Bacteria 10797
222 Ga0500609_001770 3300053731 Bacteria 3129
223 Ga0590071_000750 3300059421 Bacteria 9080
224 Ga0590077_004686 3300059426 Bacteria 2800
225 Ga0501082_0003196 3300060353 Bacteria 14288
226 Ga0501082_0038619 3300060353 Bacteria 4119
227 Ga0501082_0125259 3300060353 Bacteria 2228
228 Ga0501082_0127840 3300060353 Bacteria 2204
229 Ga0530510_0016846 3300061734 Bacteria 5176

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300059421 Ga0590071_000750 Ga0590071_000750_6951_7988 293
2 3300059426 Ga0590077_004686 Ga0590077_004686_1507_2544 293
3 3300013104 Ga0157370_10281276 Ga0157370_102812762 296
4 3300049579 Ga0501043_0042923 Ga0501043_0042923_1429_2442 296
5 3300005336 Ga0070680_100002234 Ga0070680_1000022345 297
6 3300005458 Ga0070681_10092063 Ga0070681_100920636 297
7 3300005530 Ga0070679_100007045 Ga0070679_1000070452 297
8 3300005539 Ga0068853_100020318 Ga0068853_1000203188 297
9 3300005563 Ga0068855_100031903 Ga0068855_1000319036 297
10 3300025909 Ga0207705_10000424 Ga0207705_100004242 297
11 3300025912 Ga0207707_10083321 Ga0207707_100833215 297
12 3300025917 Ga0207660_10002157 Ga0207660_1000215712 297
13 3300025919 Ga0207657_10000735 Ga0207657_1000073532 297
14 3300025949 Ga0207667_10298713 Ga0207667_102987132 297
15 3300026041 Ga0207639_10124389 Ga0207639_101243892 297
16 3300046520 Ga0495637_0006111 Ga0495637_0006111_3578_4600 299
17 3300053104 Ga0500556_0000830 Ga0500556_0000830_9022_10032 299
18 3300053134 Ga0500658_0001104 Ga0500658_0001104_4561_5571 299
19 3300053730 Ga0500645_001427 Ga0500645_001427_9495_10505 299
20 3300005365 Ga0070688_100104242 Ga0070688_1001042422 300
21 3300048913 Ga0496110_0452244 Ga0496110_0452244_41_1054 300
22 3300005539 Ga0068853_100055537 Ga0068853_1000555375 302
23 3300049744 Ga0501083_0042422 Ga0501083_0042422_153_1130 302
24 3300031852 Ga0307410_10270619 Ga0307410_102706191 303
25 3300031901 Ga0307406_10160437 Ga0307406_101604371 303
26 3300032004 Ga0307414_10138793 Ga0307414_101387931 303
27 3300046460 Ga0495638_0001122 Ga0495638_0001122_23453_24559 304
28 3300037471 Ga0395905_0317350 Ga0395905_0317350_20_1012 305
29 3300049569 Ga0501032_0027492 Ga0501032_0027492_1469_2476 306
30 3300049570 Ga0501033_0004619 Ga0501033_0004619_1261_2268 306
31 3300049572 Ga0501036_0110228 Ga0501036_0110228_565_1572 306
32 3300049579 Ga0501043_0004584 Ga0501043_0004584_6299_7306 306
33 3300049581 Ga0501047_0009256 Ga0501047_0009256_1394_2401 306
34 3300049586 Ga0501070_0014689 Ga0501070_0014689_1130_2137 306
35 3300049589 Ga0501073_0028883 Ga0501073_0028883_601_1608 306
36 3300049742 Ga0501080_0036947 Ga0501080_0036947_2762_3769 306
37 3300049823 Ga0501044_0005854 Ga0501044_0005854_7817_8824 306
38 3300060353 Ga0501082_0125259 Ga0501082_0125259_49_1056 306
39 3300049591 Ga0501075_0285475 Ga0501075_0285475_120_1055 307
40 3300049571 Ga0501034_0051744 Ga0501034_0051744_868_1833 308
41 3300049580 Ga0501046_0002615 Ga0501046_0002615_10582_11547 308
42 3300049581 Ga0501047_0002290 Ga0501047_0002290_252_1217 308
43 3300049742 Ga0501080_0039077 Ga0501080_0039077_2696_3661 308
44 3300049823 Ga0501044_0164633 Ga0501044_0164633_243_1208 308
45 3300047472 Ga0495686_0078162 Ga0495686_0078162_924_1994 309
46 3300005327 Ga0070658_10254307 Ga0070658_102543071 310
47 3300005548 Ga0070665_100000327 Ga0070665_1000003279 310
48 3300025250 Ga0209026_1001597 Ga0209026_10015976 310
49 3300025297 Ga0209758_1009419 Ga0209758_10094193 310
50 3300028379 Ga0268266_10000064 Ga0268266_1000006499 310
51 3300032005 Ga0307411_10271853 Ga0307411_102718531 310
52 3300049822 Ga0501035_0287740 Ga0501035_0287740_430_1362 310
53 3300003794 Ga0055531_10011709 Ga0055531_100117094 311
54 3300005336 Ga0070680_100156714 Ga0070680_1001567142 311
55 3300025304 Ga0209257_1000066 Ga0209257_1000066258 311
56 3300025917 Ga0207660_10083646 Ga0207660_100836462 311
57 3300049579 Ga0501043_0172930 Ga0501043_0172930_296_1267 311
58 3300049822 Ga0501035_0053447 Ga0501035_0053447_135_1106 311
59 3300046452 Ga0495617_022387 Ga0495617_022387_400_1404 312
60 3300049568 Ga0501031_0086260 Ga0501031_0086260_160_1236 312
61 3300049576 Ga0501040_0031378 Ga0501040_0031378_2050_3126 312
62 3300049592 Ga0501076_0026734 Ga0501076_0026734_1864_2940 312
63 3300049593 Ga0501077_0018046 Ga0501077_0018046_3280_4356 312
64 3300049743 Ga0501081_0036066 Ga0501081_0036066_1910_2986 312
65 3300061734 Ga0530510_0016846 Ga0530510_0016846_2960_4036 312
66 3300025925 Ga0207650_10156208 Ga0207650_101562081 313
67 3300046460 Ga0495638_0032006 Ga0495638_0032006_1561_2550 313
68 3300037471 Ga0395905_0026806 Ga0395905_0026806_2001_2954 314
69 3300038443 Ga0395901_0674349 Ga0395901_0674349_12_965 314
70 3300047469 Ga0495673_0001209 Ga0495673_0001209_13278_14282 314
71 3300049571 Ga0501034_0006897 Ga0501034_0006897_860_1834 314
72 3300009093 Ga0105240_10001061 Ga0105240_1000106115 315
73 3300025913 Ga0207695_10000939 Ga0207695_100009396 315
74 3300049570 Ga0501033_0000389 Ga0501033_0000389_30690_31664 315
75 3300049573 Ga0501037_0201089 Ga0501037_0201089_310_1284 315
76 3300049823 Ga0501044_0000906 Ga0501044_0000906_16719_17693 315
77 3300046460 Ga0495638_0001193 Ga0495638_0001193_17476_18486 316
78 3300049568 Ga0501031_0082285 Ga0501031_0082285_25_1053 316
79 3300049593 Ga0501077_0019344 Ga0501077_0019344_1015_2043 316
80 3300049741 Ga0501079_0018252 Ga0501079_0018252_2920_3948 316
81 3300003773 Ga0055537_1000904 Ga0055537_100090413 317
82 3300003775 Ga0055524_1003180 Ga0055524_10031805 317
83 3300003790 Ga0055528_1010951 Ga0055528_10109512 317
84 3300006178 Ga0075367_10092878 Ga0075367_100928782 317
85 3300009093 Ga0105240_10095475 Ga0105240_100954754 317
86 3300013307 Ga0157372_10184183 Ga0157372_101841832 317
87 3300025263 Ga0209565_1000280 Ga0209565_100028012 317
88 3300025273 Ga0209673_1002255 Ga0209673_100225514 317
89 3300025295 Ga0209564_1014811 Ga0209564_10148112 317
90 3300025299 Ga0209256_1004997 Ga0209256_10049974 317
91 3300025949 Ga0207667_10162771 Ga0207667_101627712 317
92 3300049581 Ga0501047_0241240 Ga0501047_0241240_464_1420 318
93 3300006048 Ga0075363_100033013 Ga0075363_1000330133 319
94 3300006178 Ga0075367_10096058 Ga0075367_100960582 319
95 3300050489 nmdc:mga03683_39508_c1 nmdc:mga03683_39508_c1_36_1037 319
96 3300053139 Ga0500568_0000005 Ga0500568_0000005_145678_146640 320
97 3300013297 Ga0157378_10115481 Ga0157378_101154811 321
98 3300013297 Ga0157378_10377087 Ga0157378_103770872 321
99 3300048925 Ga0496122_0001509 Ga0496122_0001509_35307_36272 321
100 3300048926 Ga0496123_0000950 Ga0496123_0000950_35307_36272 321
101 3300049581 Ga0501047_0056146 Ga0501047_0056146_226_1200 322
102 3300049742 Ga0501080_0085097 Ga0501080_0085097_1822_2796 322
103 3300053136 Ga0500559_0000024 Ga0500559_0000024_75838_76854 322
104 3300060353 Ga0501082_0127840 Ga0501082_0127840_319_1293 322
105 3300046810 Ga0495660_0049857 Ga0495660_0049857_1191_2201 323
106 3300049586 Ga0501070_0168966 Ga0501070_0168966_35_1015 323
107 3300048929 Ga0496126_0001616 Ga0496126_0001616_18139_19113 324
108 3300049588 Ga0501072_0034971 Ga0501072_0034971_2245_3219 324
109 3300049744 Ga0501083_0024193 Ga0501083_0024193_3068_4042 324
110 3300053080 Ga0500635_0006483 Ga0500635_0006483_1240_2226 324
111 3300060353 Ga0501082_0003196 Ga0501082_0003196_1206_2180 324
112 iso_pu_bacteria 2842871566 2842873342 324
113 iso_pu_bacteria 2883354860 2883357492 324
114 3300028380 Ga0268265_10061217 Ga0268265_100612172 325
115 3300050489 nmdc:mga03683_29928_c1 nmdc:mga03683_29928_c1_701_1678 325
116 3300005331 Ga0070670_100082357 Ga0070670_1000823573 326
117 3300005334 Ga0068869_100045849 Ga0068869_1000458494 326
118 3300005364 Ga0070673_100033214 Ga0070673_1000332144 326
119 3300005456 Ga0070678_100209788 Ga0070678_1002097882 326
120 3300006237 Ga0097621_100013897 Ga0097621_1000138975 326
121 3300006358 Ga0068871_100034531 Ga0068871_1000345313 326
122 3300009174 Ga0105241_10143057 Ga0105241_101430572 326
123 3300009174 Ga0105241_10314999 Ga0105241_103149992 326
124 3300013296 Ga0157374_10068847 Ga0157374_100688474 326
125 3300025960 Ga0207651_10021787 Ga0207651_100217873 326
126 3300005458 Ga0070681_10053614 Ga0070681_100536145 327
127 3300005539 Ga0068853_100095740 Ga0068853_1000957403 327
128 3300005577 Ga0068857_100164398 Ga0068857_1001643982 327
129 3300025921 Ga0207652_10186887 Ga0207652_101868873 327
130 3300025949 Ga0207667_10247515 Ga0207667_102475152 327
131 3300026116 Ga0207674_10096093 Ga0207674_100960934 327
132 3300049822 Ga0501035_0016357 Ga0501035_0016357_737_1720 327
133 3300053122 Ga0500608_000099 Ga0500608_000099_8176_9159 327
134 3300003791 Ga0055530_10000559 Ga0055530_1000055911 328
135 3300003794 Ga0055531_10001988 Ga0055531_1000198810 328
136 3300005262 Ga0065165_1000277 Ga0065165_100027776 328
137 3300005844 Ga0068862_100302394 Ga0068862_1003023942 328
138 3300006038 Ga0075365_10018266 Ga0075365_100182664 328
139 3300006178 Ga0075367_10033136 Ga0075367_100331364 328
140 3300006186 Ga0075369_10011705 Ga0075369_100117055 328
141 3300015684 Ga0183365_10001 Ga0183365_10001647 328
142 3300021388 Ga0213875_10076965 Ga0213875_100769652 328
143 3300025297 Ga0209758_1000920 Ga0209758_100092016 328
144 3300025298 Ga0209050_1000200 Ga0209050_100020094 328
145 3300025304 Ga0209257_1000225 Ga0209257_100022594 328
146 3300026095 Ga0207676_10148967 Ga0207676_101489672 328
147 3300031251 Ga0265327_10000456 Ga0265327_1000045663 328
148 3300037853 Ga0436364_1362276 Ga0436364_1362276_324_1328 328
149 3300049586 Ga0501070_0196949 Ga0501070_0196949_215_1210 328
150 3300049589 Ga0501073_0034362 Ga0501073_0034362_2438_3424 328
151 3300049742 Ga0501080_0143914 Ga0501080_0143914_825_1811 328
152 3300049744 Ga0501083_0013872 Ga0501083_0013872_1052_2038 328
153 3300049823 Ga0501044_0451650 Ga0501044_0451650_62_1048 328
154 3300050489 nmdc:mga03683_75751_c1 nmdc:mga03683_75751_c1_276_1262 328
155 3300050492 nmdc:mga0yw44_3370_c1 nmdc:mga0yw44_3370_c1_1134_2120 328
156 3300050494 nmdc:mga06z11_125471_c1 nmdc:mga06z11_125471_c1_337_1323 328
157 3300050516 nmdc:mga0sz30_15445_c1 nmdc:mga0sz30_15445_c1_1525_2511 328
158 3300053153 Ga0500616_0000962 Ga0500616_0000962_5452_6438 328
159 3300053730 Ga0500645_001687 Ga0500645_001687_1208_2200 328
160 3300060353 Ga0501082_0038619 Ga0501082_0038619_2966_3952 328
161 3300053091 Ga0500647_0003906 Ga0500647_0003906_863_1867 329
162 3300053139 Ga0500568_0088096 Ga0500568_0088096_18_1022 329
163 3300025924 Ga0207694_10203332 Ga0207694_102033322 330
164 iso_pu_bacteria 2582581279 2585145863 330
165 iso_pu_bacteria 2643221552 2643780839 330
166 iso_pu_bacteria 2643221584 2643931478 330
167 iso_pu_bacteria 2818991435 2819539806 330
168 iso_pu_bacteria 2818991454 2819648915 330
169 3300035115 Ga0373941_0006520 Ga0373941_0006520_818_1816 331
170 3300037418 Ga0395900_0232284 Ga0395900_0232284_138_1142 331
171 3300037471 Ga0395905_0050057 Ga0395905_0050057_750_1763 331
172 3300037471 Ga0395905_0112343 Ga0395905_0112343_970_1974 331
173 3300038443 Ga0395901_0074072 Ga0395901_0074072_138_1142 331
174 3300038443 Ga0395901_0378137 Ga0395901_0378137_403_1407 331
175 3300049822 Ga0501035_0080677 Ga0501035_0080677_193_1191 331
176 3300006028 Ga0070717_10023121 Ga0070717_100231212 332
177 3300006048 Ga0075363_100000667 Ga0075363_10000066719 332
178 3300006178 Ga0075367_10000089 Ga0075367_1000008913 332
179 3300006186 Ga0075369_10000553 Ga0075369_1000055310 332
180 3300006353 Ga0075370_10000777 Ga0075370_100007776 332
181 3300009093 Ga0105240_10095597 Ga0105240_100955974 332
182 3300013306 Ga0163162_10182056 Ga0163162_101820562 332
183 3300025913 Ga0207695_10293286 Ga0207695_102932861 332
184 3300025920 Ga0207649_10000029 Ga0207649_1000002961 332
185 3300027866 Ga0209813_10001766 Ga0209813_100017662 332
186 3300031250 Ga0265331_10000763 Ga0265331_1000076330 332
187 3300031251 Ga0265327_10000153 Ga0265327_1000015388 332
188 3300031711 Ga0265314_10140065 Ga0265314_101400653 332
189 3300049580 Ga0501046_0020247 Ga0501046_0020247_1016_2023 332
190 3300050490 nmdc:mga03n38_8467_c1 nmdc:mga03n38_8467_c1_1214_2224 332
191 3300050491 nmdc:mga00v17_8467_c1 nmdc:mga00v17_8467_c1_1342_2352 332
192 3300050492 nmdc:mga0yw44_3220_c1 nmdc:mga0yw44_3220_c1_3286_4296 332
193 3300050495 nmdc:mga04h51_28452_c1 nmdc:mga04h51_28452_c1_412_1422 332
194 3300005341 Ga0070691_10116584 Ga0070691_101165841 333
195 3300005458 Ga0070681_10028089 Ga0070681_100280892 333
196 3300005530 Ga0070679_100063437 Ga0070679_1000634371 333
197 3300005563 Ga0068855_100082473 Ga0068855_1000824733 333
198 3300009093 Ga0105240_10031757 Ga0105240_100317574 333
199 3300009551 Ga0105238_10069546 Ga0105238_100695463 333
200 3300025912 Ga0207707_10045313 Ga0207707_100453133 333
201 3300025913 Ga0207695_10002233 Ga0207695_100022338 333
202 3300025921 Ga0207652_10074159 Ga0207652_100741592 333
203 3300025924 Ga0207694_10231450 Ga0207694_102314502 333
204 3300025949 Ga0207667_10020497 Ga0207667_100204973 333
205 3300003771 Ga0055526_1019007 Ga0055526_10190072 334
206 3300005262 Ga0065165_1001156 Ga0065165_100115629 334
207 3300025295 Ga0209564_1004179 Ga0209564_10041794 334
208 3300025299 Ga0209256_1001877 Ga0209256_100187719 334
209 3300028794 Ga0307515_10156162 Ga0307515_101561621 334
210 3300046457 Ga0495590_0000894 Ga0495590_0000894_7158_8162 334
211 3300046460 Ga0495638_0000963 Ga0495638_0000963_14764_15768 334
212 3300046460 Ga0495638_0007453 Ga0495638_0007453_3766_4878 334
213 3300046507 Ga0495606_0003511 Ga0495606_0003511_5869_6873 334
214 3300046512 Ga0495610_0000218 Ga0495610_0000218_36941_37951 334
215 3300046512 Ga0495610_0001203 Ga0495610_0001203_11317_12321 334
216 3300046513 Ga0495616_0003631 Ga0495616_0003631_3835_4947 334
217 3300046519 Ga0495632_0010176 Ga0495632_0010176_1751_2863 334
218 3300046519 Ga0495632_0088849 Ga0495632_0088849_349_1371 334
219 3300046616 Ga0495668_0004296 Ga0495668_0004296_3842_4846 334
220 3300046616 Ga0495668_0049822 Ga0495668_0049822_144_1166 334
221 3300046660 Ga0495625_0000165 Ga0495625_0000165_14957_16069 334
222 3300046660 Ga0495625_0002840 Ga0495625_0002840_14025_15041 334
223 3300047320 Ga0495672_0001176 Ga0495672_0001176_19356_20366 334
224 3300047323 Ga0495683_0017843 Ga0495683_0017843_71_1150 334
225 3300047446 Ga0495679_011481 Ga0495679_011481_1073_2089 334
226 3300047472 Ga0495686_0002771 Ga0495686_0002771_1611_2615 334
227 3300049459 Ga0495678_001349 Ga0495678_001349_11519_12523 334
228 3300053086 Ga0500578_0000080 Ga0500578_0000080_96784_97788 334
229 3300053088 Ga0500644_0014276 Ga0500644_0014276_828_1832 334
230 3300053102 Ga0500554_001284 Ga0500554_001284_2325_3329 334
231 3300053108 Ga0500562_001106 Ga0500562_001106_5288_6292 334
232 3300053118 Ga0500594_0000143 Ga0500594_0000143_6583_7587 334
233 3300053125 Ga0500618_000195 Ga0500618_000195_6446_7462 334
234 3300053136 Ga0500559_0009254 Ga0500559_0009254_2661_3665 334
235 3300053156 Ga0500622_0005394 Ga0500622_0005394_5141_6145 334
236 3300053731 Ga0500609_001770 Ga0500609_001770_1987_3099 334
237 iso_pu_bacteria 2643221545 2643750993 334
238 iso_pu_bacteria 2643221691 2644510068 334

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

127

320

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

133

368

0.94

PF08659

KR

KR domain

127

310

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i3o-assembly2.cif.gz_G 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9833 75 332
3i3o-assembly2.cif.gz_H 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9742 61 332
3i3o-assembly1.cif.gz_A 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9717 55 332
3i3o-assembly2.cif.gz_G 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9596 75 332
3i3o-assembly2.cif.gz_H 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9565 61 332
ID Description Score Start End Superfamily
3i3oG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9833 75 332 3.40.50.720
af_K7KGR3_30_220_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9714 151 332 3.40.50.720
3i3oG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9596 75 332 3.40.50.720
3r3sA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9563 52 334 3.40.50.720
af_Q75KH3_1_297_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9545 54 332 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A418IZU3-F1-model_v4 deleted 0.9832 139 268
AF-A0A519T453-F1-model_v4 SDR family oxidoreductase 0.9777 82 331 GO:0016614
AF-A0A6J4KT55-F1-model_v4 Oxidoreductase, short-chain dehydrogenase/reductase family 0.9771 197 332 GO:0016614
AF-A0A4Q5VLK3-F1-model_v4 deleted 0.9767 172 332
AF-A0A418IZU3-F1-model_v4 deleted 0.9758 139 268

Feature Viewer

pLDDT pTM Quality
83.89 0.85 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map