F350806

General Info

Members Datasets Scaffolds Average Seq Length
238 192 231 323

Family's Representative Sequence

Representative Sequence 3300005844|Ga0068862_100061569|Ga0068862_1000615692
Length 355
Sequence MLRPLSSGSVRPPTCLKRRFLLSPNTVEVHALQKGELMAKTRVAVLDDYQDVALQMTDWNSIAADTEITVFKDHLFDQDAIVERLKDFPIVVAMRERTPFQRPLLERLPKLRLLVTTGMRNAAIDVAAATALGITVCGSGGVLYPTAELTWGLILALLRHIPREDKAVRDGQWQVSMGLGVNGKTLGVIGLGNLGSQVATIGKAFQMKVLAWSQNLTAERAAQVGVELVTKDELLSRSDIVTIHLVLSDRTRNLLGARELGLMRTSAYLINTSRGPIVEETALIEALQKKTIAGAGLDVFDLEPLSLDHPLRRLENTVITPHIGYVTKETYEIFFRHIVENIRAFLDGKPIRVFK

Samples

Sample ID Description Type Environment
1 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
2 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
3 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
4 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
5 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
6 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
7 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
8 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
9 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
10 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
11 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
12 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
13 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
14 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
15 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
16 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
72 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
73 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
92 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
93 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
94 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
98 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
108 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
109 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
110 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
111 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
112 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
113 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
114 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
115 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
116 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
117 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
120 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
121 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
122 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
123 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
124 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
125 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
126 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
127 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
128 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
129 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
130 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
131 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
132 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
133 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
134 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
135 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
136 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
137 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
138 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
139 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
140 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
141 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
142 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
143 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
144 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
145 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
146 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
147 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
148 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
149 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
150 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
151 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
152 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
153 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
154 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
155 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
156 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
159 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
160 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
161 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
167 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
168 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
169 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
170 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
171 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
172 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
175 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
176 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
177 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
178 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
179 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
180 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
181 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
182 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
183 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
186 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
187 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
188 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
189 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
190 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
191 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
192 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.06
Metatranscriptomes 0
Isolates 2.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.07
Nodule 0
Rhizoplane 2.1
Rhizosphere 72.69
Stem 0
Stem Tuber 0
Unclassified 7.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10007140 3300001979 Bacteria 4562
2 JGI24739J22299_10003275 3300001989 Bacteria 6176
3 JGI24737J22298_10005069 3300001990 Bacteria 4563
4 JGI25156J39149_1005808 3300002705 Bacteria 3488
5 JGI25165J46597_1000951 3300003214 Bacteria 19820
6 Ga0055532_1000021 3300003758 Bacteria 261162
7 Ga0055527_1000015 3300003760 Bacteria 261162
8 Ga0055535_1000015 3300003761 Bacteria 261162
9 Ga0055542_1000026 3300003762 Bacteria 261162
10 Ga0055529_1000031 3300003763 Bacteria 261162
11 Ga0070676_10196570 3300005328 Unclassified 1320
12 Ga0070670_100283210 3300005331 Unclassified 1447
13 Ga0070666_10110936 3300005335 Bacteria 1897
14 Ga0070668_100154074 3300005347 Bacteria 1861
15 Ga0070709_10034118 3300005434 Bacteria 3083
16 Ga0070714_100004215 3300005435 Bacteria 10832
17 Ga0070710_10005273 3300005437 Bacteria 6129
18 Ga0070708_100002230 3300005445 Bacteria 14982
19 Ga0070663_100005712 3300005455 Bacteria 7417
20 Ga0070706_100038905 3300005467 Bacteria 4390
21 Ga0070706_100386687 3300005467 Bacteria 1303
22 Ga0070697_100059206 3300005536 Unclassified 3118
23 Ga0068853_100059516 3300005539 Bacteria 3300
24 Ga0068855_100018872 3300005563 Bacteria 8290
25 Ga0068855_100119160 3300005563 Bacteria 3022
26 Ga0068857_100003393 3300005577 Bacteria 13264
27 Ga0068857_100012015 3300005577 Bacteria 7531
28 Ga0068854_100010011 3300005578 Bacteria 6138
29 Ga0068854_100060997 3300005578 Bacteria 2730
30 Ga0068856_100019158 3300005614 Bacteria 6643
31 Ga0068856_100042219 3300005614 Bacteria 4486
32 Ga0068852_100008405 3300005616 Bacteria 7608
33 Ga0068852_100100781 3300005616 Bacteria 2606
34 Ga0068859_100042623 3300005617 Unclassified 4559
35 Ga0068864_100136338 3300005618 Bacteria 2210
36 Ga0068851_10001384 3300005834 Bacteria 10587
37 Ga0068851_10032291 3300005834 Bacteria 2605
38 Ga0068860_100091994 3300005843 Bacteria 2890
39 Ga0068862_100061569 3300005844 Bacteria 3226
40 Ga0081540_1073319 3300005983 Bacteria 1573
41 Ga0081539_10001109 3300005985 Bacteria 48782
42 Ga0075363_100000709 3300006048 Bacteria 11295
43 Ga0075364_10007495 3300006051 Bacteria 6487
44 Ga0075364_10036720 3300006051 Bacteria 3169
45 Ga0070712_100320025 3300006175 Bacteria 1261
46 Ga0075362_10000629 3300006177 Bacteria 10323
47 Ga0075369_10003753 3300006186 Bacteria 5556
48 Ga0075366_10000099 3300006195 Bacteria 35250
49 Ga0075370_10000103 3300006353 Bacteria 26975
50 Ga0075370_10000106 3300006353 Bacteria 26815
51 Ga0068871_100224608 3300006358 Bacteria 1628
52 Ga0075428_100048250 3300006844 Bacteria 4674
53 Ga0075431_100345525 3300006847 Unclassified 1497
54 Ga0097620_100042622 3300006931 Unclassified 4559
55 Ga0105240_10012741 3300009093 Bacteria 11589
56 Ga0105240_10024020 3300009093 Bacteria 8051
57 Ga0111539_10026771 3300009094 Bacteria 7046
58 Ga0111539_10063451 3300009094 Bacteria 4372
59 Ga0105247_10018299 3300009101 Bacteria 4203
60 Ga0114129_10606223 3300009147 Bacteria 1418
61 Ga0105241_10002223 3300009174 Bacteria 14590
62 Ga0105238_10005872 3300009551 Bacteria 12161
63 Ga0105238_10023215 3300009551 Bacteria 6323
64 Ga0105238_10026487 3300009551 Bacteria 5912
65 Ga0105249_10102625 3300009553 Bacteria 2692
66 Ga0105239_10006765 3300010375 Bacteria 13236
67 Ga0105239_10014460 3300010375 Bacteria 8758
68 Ga0163162_10010440 3300013306 Bacteria 9028
69 Ga0163162_10010736 3300013306 Bacteria 8909
70 Ga0157375_10009315 3300013308 Bacteria 8620
71 Ga0157375_10230809 3300013308 Bacteria 2010
72 Ga0163163_10129029 3300014325 Bacteria 2568
73 Ga0157380_10081702 3300014326 Bacteria 2644
74 Ga0157379_10307802 3300014968 Bacteria 1445
75 Ga0157379_10334110 3300014968 Bacteria 1385
76 Ga0163161_10022333 3300017792 Bacteria 4455
77 Ga0209672_100021 3300025228 Bacteria 428473
78 Ga0209147_100025 3300025229 Bacteria 428473
79 Ga0207427_102872 3300025231 Bacteria 4114
80 Ga0209258_100037 3300025242 Bacteria 428473
81 Ga0209148_1000049 3300025254 Bacteria 428473
82 Ga0209759_1000433 3300025256 Bacteria 50171
83 Ga0209233_1000091 3300025261 Bacteria 309402
84 Ga0209455_1000041 3300025272 Bacteria 428473
85 Ga0207692_10003773 3300025898 Bacteria 5949
86 Ga0207647_10001898 3300025904 Bacteria 16019
87 Ga0207654_10000317 3300025911 Bacteria 28925
88 Ga0207695_10000713 3300025913 Bacteria 64808
89 Ga0207695_10029144 3300025913 Bacteria 6107
90 Ga0207693_10106340 3300025915 Bacteria 2201
91 Ga0207694_10000155 3300025924 Bacteria 70678
92 Ga0207694_10019100 3300025924 Bacteria 5180
93 Ga0207650_10186904 3300025925 Unclassified 1654
94 Ga0207664_10162458 3300025929 Bacteria 1906
95 Ga0207706_10320071 3300025933 Bacteria 1350
96 Ga0207667_10026865 3300025949 Bacteria 6281
97 Ga0207668_10300205 3300025972 Bacteria 1325
98 Ga0207640_10002792 3300025981 Bacteria 9367
99 Ga0207640_10060497 3300025981 Bacteria 2504
100 Ga0207639_10067677 3300026041 Bacteria 2780
101 Ga0207678_10050408 3300026067 Bacteria 3597
102 Ga0207678_10101946 3300026067 Bacteria 2450
103 Ga0207702_10000022 3300026078 Bacteria 192961
104 Ga0207674_10012438 3300026116 Bacteria 9510
105 Ga0207674_10013910 3300026116 Bacteria 8904
106 Ga0268264_10172539 3300028381 Bacteria 1957
107 Ga0265337_1005869 3300028556 Bacteria 4808
108 Ga0265334_10003044 3300028573 Bacteria 7658
109 Ga0265338_10004201 3300028800 Bacteria 19644
110 Ga0307511_10000960 3300030521 Bacteria 30555
111 Ga0307511_10025580 3300030521 Bacteria 5435
112 Ga0307509_10002533 3300031507 Bacteria 29450
113 Ga0307408_100069672 3300031548 Bacteria 2594
114 Ga0265314_10042689 3300031711 Bacteria 3232
115 Ga0307516_10000002 3300031730 Bacteria 467851
116 Ga0307516_10000999 3300031730 Bacteria 39119
117 Ga0307516_10291760 3300031730 Bacteria 1309
118 Ga0307405_10018234 3300031731 Bacteria 3869
119 Ga0307413_10002050 3300031824 Bacteria 8035
120 Ga0307410_10002584 3300031852 Bacteria 8787
121 Ga0307406_10012163 3300031901 Bacteria 4901
122 Ga0307412_10002387 3300031911 Bacteria 10430
123 Ga0307409_100003679 3300031995 Bacteria 8401
124 Ga0307416_100002403 3300032002 Bacteria 10735
125 Ga0307414_10166970 3300032004 Bacteria 1755
126 Ga0307411_10004641 3300032005 Bacteria 6619
127 Ga0307415_100167861 3300032126 Bacteria 1708
128 Ga0373930_0019611 3300034816 Bacteria 1310
129 Ga0373939_0007972 3300035114 Bacteria 2586
130 Ga0373954_0031868 3300035118 Bacteria 2435
131 Ga0373955_0072354 3300035172 Bacteria 1931
132 Ga0373924_0023440 3300035410 Bacteria 2422
133 Ga0373931_0058016 3300035691 Bacteria 2078
134 Ga0373935_0064370 3300035692 Bacteria 2351
135 Ga0373927_0023352 3300035695 Bacteria 4050
136 Ga0373927_0025547 3300035695 Bacteria 3862
137 Ga0373927_0025833 3300035695 Bacteria 3839
138 Ga0373933_0004180 3300035724 Bacteria 7954
139 Ga0373933_0131005 3300035724 Bacteria 1577
140 Ga0373937_0002757 3300036401 Bacteria 14654
141 Ga0373937_0064451 3300036401 Bacteria 3370
142 Ga0373937_0411687 3300036401 Bacteria 1283
143 Ga0373925_0058391 3300037068 Bacteria 2893
144 Ga0373925_0109262 3300037068 Bacteria 2135
145 Ga0373925_0133893 3300037068 Bacteria 1935
146 Ga0436360_1360298 3300039438 Bacteria 4289
147 Ga0436361_0333687 3300039447 Bacteria 2909
148 Ga0495592_0002828 3300046454 Bacteria 12308
149 Ga0495629_0008358 3300046459 Bacteria 7613
150 Ga0495629_0214211 3300046459 Unclassified 1330
151 Ga0495638_0003644 3300046460 Bacteria 12007
152 Ga0495651_0035128 3300046462 Bacteria 3905
153 Ga0495653_0026920 3300046463 Bacteria 4606
154 Ga0495580_0196687 3300046472 Bacteria 1390
155 Ga0495582_0036410 3300046473 Unclassified 2708
156 Ga0495605_0047090 3300046474 Bacteria 2116
157 Ga0495639_0154285 3300046475 Bacteria 1109
158 Ga0495585_0027565 3300046492 Bacteria 3242
159 Ga0495607_0021190 3300046501 Bacteria 4092
160 Ga0495608_0013742 3300046511 Bacteria 5616
161 Ga0495610_0033935 3300046512 Bacteria 2633
162 Ga0495630_0157111 3300046517 Bacteria 1731
163 Ga0495652_0002006 3300046529 Bacteria 21708
164 Ga0495665_0020313 3300046531 Bacteria 3568
165 Ga0495640_0011972 3300046533 Bacteria 6651
166 Ga0495586_0089423 3300046535 Unclassified 1700
167 Ga0495645_0012236 3300046543 Bacteria 6043
168 Ga0495645_0080910 3300046543 Bacteria 2331
169 Ga0495622_0014616 3300046557 Bacteria 3646
170 Ga0495667_0001348 3300046559 Bacteria 16125
171 Ga0495667_0128911 3300046559 Unclassified 1632
172 Ga0495667_0166944 3300046559 Bacteria 1415
173 Ga0495634_0013598 3300046642 Bacteria 5879
174 Ga0495611_0045287 3300046648 Bacteria 1970
175 Ga0495635_0013926 3300046663 Bacteria 5627
176 Ga0495599_0002851 3300046678 Bacteria 10073
177 Ga0495599_0073927 3300046678 Unclassified 2128
178 Ga0495623_0006500 3300046679 Bacteria 7608
179 Ga0495646_0006529 3300046680 Bacteria 7400
180 Ga0495669_0011189 3300046684 Bacteria 3805
181 Ga0495589_0012062 3300046794 Bacteria 4480
182 Ga0495589_0014853 3300046794 Bacteria 4006
183 Ga0495604_0016074 3300047317 Bacteria 5977
184 Ga0495680_0015132 3300047322 Bacteria 6662
185 Ga0495675_0006719 3300047444 Bacteria 7050
186 Ga0495681_0000927 3300047470 Bacteria 22627
187 Ga0495681_0083300 3300047470 Bacteria 1424
188 Ga0495686_0000046 3300047472 Bacteria 281963
189 Ga0495686_0000048 3300047472 Bacteria 278044
190 Ga0495602_0004601 3300048088 Bacteria 14394
191 Ga0496102_0127341 3300048905 Bacteria 2381
192 Ga0496102_0144087 3300048905 Bacteria 2235
193 Ga0496107_0052662 3300048910 Bacteria 2936
194 Ga0496114_0106435 3300048917 Bacteria 2400
195 Ga0496115_0421227 3300048918 Bacteria 1082
196 Ga0496117_0002062 3300048920 Bacteria 26586
197 Ga0496118_0004602 3300048921 Bacteria 16211
198 Ga0496126_0000035 3300048929 Bacteria 361590
199 Ga0496126_0000105 3300048929 Bacteria 198893
200 Ga0495678_019460 3300049459 Bacteria 3028
201 Ga0501034_0314451 3300049571 Bacteria 1500
202 Ga0501068_0031859 3300049584 Bacteria 3132
203 Ga0501074_0192287 3300049590 Bacteria 1455
204 nmdc:mga03683_81_c1 3300050489 Bacteria 35868
205 nmdc:mga03n38_107692_c1 3300050490 Bacteria 1353
206 nmdc:mga03n38_7683_c1 3300050490 Bacteria 3826
207 nmdc:mga00v17_503_c2 3300050491 Bacteria 11807
208 nmdc:mga0k408_5_c2 3300050493 Bacteria 142245
209 nmdc:mga07m45_158_c1 3300050496 Bacteria 27075
210 nmdc:mga07m45_225_c1 3300050496 Bacteria 22543
211 nmdc:mga0qj67_333424_c1 3300050509 Bacteria 1227
212 nmdc:mga08y16_111856_c1 3300050511 Bacteria 2843
213 nmdc:mga0sz30_3640_c1 3300050516 Bacteria 5556
214 Ga0495612_0006967 3300053078 Bacteria 4625
215 Ga0495595_0001316 3300053084 Bacteria 9650
216 Ga0495619_0000949 3300053085 Bacteria 18989
217 Ga0500643_005739 3300053087 Bacteria 5296
218 Ga0500660_053531 3300053100 Bacteria 1983
219 Ga0500562_000266 3300053108 Bacteria 13131
220 Ga0500655_002971 3300053133 Unclassified 3077
221 Ga0500658_0015804 3300053134 Unclassified 2807
222 Ga0500559_0013239 3300053136 Bacteria 3495
223 Ga0500590_092807 3300053148 Unclassified 1463
224 Ga0500616_0014181 3300053153 Bacteria 4588
225 Ga0500616_0142594 3300053153 Bacteria 1118
226 Ga0500616_0169358 3300053153 Bacteria 993
227 Ga0500622_0004471 3300053156 Bacteria 8764
228 Ga0500634_0003530 3300053161 Bacteria 6980
229 Ga0500570_000868 3300053724 Bacteria 12900
230 Ga0500596_002864 3300053735 Bacteria 3359
231 Ga0530510_0053656 3300061734 Bacteria 2913

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049584 Ga0501068_0031859 Ga0501068_0031859_62_1045 296
2 3300009147 Ga0114129_10606223 Ga0114129_106062231 298
3 3300048905 Ga0496102_0144087 Ga0496102_0144087_903_1820 302
4 3300005985 Ga0081539_10001109 Ga0081539_1000110939 304
5 3300006051 Ga0075364_10007495 Ga0075364_100074952 304
6 3300050491 nmdc:mga00v17_503_c2 nmdc:mga00v17_503_c2_3500_4441 304
7 iso_pu_bacteria 2866552031 2866557045 307
8 iso_pu_bacteria 2904483920 2904490393 311
9 3300006051 Ga0075364_10036720 Ga0075364_100367203 312
10 3300047472 Ga0495686_0000046 Ga0495686_0000046_128973_129911 312
11 3300053153 Ga0500616_0014181 Ga0500616_0014181_12_950 312
12 3300053153 Ga0500616_0169358 Ga0500616_0169358_12_950 312
13 3300039438 Ga0436360_1360298 Ga0436360_1360298_2361_3326 313
14 3300039447 Ga0436361_0333687 Ga0436361_0333687_904_1869 313
15 iso_pu_bacteria 2857453340 2857454416 313
16 iso_pu_bacteria 2889049205 2889051008 313
17 iso_pu_bacteria 2919425241 2919426971 313
18 iso_pu_bacteria 8056533031 8056540572 313
19 3300005347 Ga0070668_100154074 Ga0070668_1001540742 314
20 3300005843 Ga0068860_100091994 Ga0068860_1000919943 314
21 3300014968 Ga0157379_10307802 Ga0157379_103078022 314
22 3300050490 nmdc:mga03n38_107692_c1 nmdc:mga03n38_107692_c1_337_1293 314
23 iso_pu_bacteria 2971410472 2971415539 314
24 3300002705 JGI25156J39149_1005808 JGI25156J39149_10058082 315
25 3300003214 JGI25165J46597_1000951 JGI25165J46597_100095120 315
26 3300003758 Ga0055532_1000021 Ga0055532_1000021279 315
27 3300003760 Ga0055527_1000015 Ga0055527_10000155 315
28 3300003761 Ga0055535_1000015 Ga0055535_10000155 315
29 3300003762 Ga0055542_1000026 Ga0055542_10000265 315
30 3300003763 Ga0055529_1000031 Ga0055529_10000315 315
31 3300005328 Ga0070676_10196570 Ga0070676_101965702 315
32 3300005335 Ga0070666_10110936 Ga0070666_101109362 315
33 3300005445 Ga0070708_100002230 Ga0070708_10000223018 315
34 3300005467 Ga0070706_100038905 Ga0070706_1000389054 315
35 3300005467 Ga0070706_100386687 Ga0070706_1003866872 315
36 3300005536 Ga0070697_100059206 Ga0070697_1000592063 315
37 3300009551 Ga0105238_10023215 Ga0105238_100232152 315
38 3300013306 Ga0163162_10010440 Ga0163162_100104402 315
39 3300013308 Ga0157375_10009315 Ga0157375_100093154 315
40 3300025228 Ga0209672_100021 Ga0209672_100021314 315
41 3300025229 Ga0209147_100025 Ga0209147_100025314 315
42 3300025231 Ga0207427_102872 Ga0207427_1028722 315
43 3300025242 Ga0209258_100037 Ga0209258_100037314 315
44 3300025254 Ga0209148_1000049 Ga0209148_1000049314 315
45 3300025256 Ga0209759_1000433 Ga0209759_100043333 315
46 3300025261 Ga0209233_1000091 Ga0209233_1000091312 315
47 3300025272 Ga0209455_1000041 Ga0209455_1000041314 315
48 3300025972 Ga0207668_10300205 Ga0207668_103002052 315
49 3300035692 Ga0373935_0064370 Ga0373935_0064370_814_1785 315
50 3300035695 Ga0373927_0023352 Ga0373927_0023352_2624_3595 315
51 3300035695 Ga0373927_0025833 Ga0373927_0025833_310_1284 315
52 3300037068 Ga0373925_0109262 Ga0373925_0109262_961_1932 315
53 3300046460 Ga0495638_0003644 Ga0495638_0003644_7300_8256 315
54 3300046474 Ga0495605_0047090 Ga0495605_0047090_218_1174 315
55 3300046492 Ga0495585_0027565 Ga0495585_0027565_547_1503 315
56 3300046501 Ga0495607_0021190 Ga0495607_0021190_3016_3972 315
57 3300046512 Ga0495610_0033935 Ga0495610_0033935_502_1458 315
58 3300046543 Ga0495645_0012236 Ga0495645_0012236_1634_2590 315
59 3300046648 Ga0495611_0045287 Ga0495611_0045287_645_1601 315
60 3300046678 Ga0495599_0073927 Ga0495599_0073927_258_1214 315
61 3300046684 Ga0495669_0011189 Ga0495669_0011189_1452_2408 315
62 3300046794 Ga0495589_0012062 Ga0495589_0012062_215_1171 315
63 3300047470 Ga0495681_0083300 Ga0495681_0083300_403_1359 315
64 3300048905 Ga0496102_0127341 Ga0496102_0127341_603_1559 315
65 3300048910 Ga0496107_0052662 Ga0496107_0052662_1156_2112 315
66 3300048918 Ga0496115_0421227 Ga0496115_0421227_43_999 315
67 3300061734 Ga0530510_0053656 Ga0530510_0053656_1292_2239 315
68 3300005983 Ga0081540_1073319 Ga0081540_10733191 316
69 3300013306 Ga0163162_10010736 Ga0163162_100107365 316
70 3300036401 Ga0373937_0411687 Ga0373937_0411687_138_1115 316
71 3300046794 Ga0495589_0014853 Ga0495589_0014853_1566_2525 316
72 3300047472 Ga0495686_0000048 Ga0495686_0000048_167857_168816 316
73 3300048917 Ga0496114_0106435 Ga0496114_0106435_1198_2157 316
74 3300048920 Ga0496117_0002062 Ga0496117_0002062_9427_10386 316
75 3300048921 Ga0496118_0004602 Ga0496118_0004602_7441_8400 316
76 3300048929 Ga0496126_0000105 Ga0496126_0000105_120659_121618 316
77 3300005331 Ga0070670_100283210 Ga0070670_1002832101 317
78 3300006358 Ga0068871_100224608 Ga0068871_1002246082 317
79 3300006844 Ga0075428_100048250 Ga0075428_1000482505 317
80 3300006847 Ga0075431_100345525 Ga0075431_1003455252 317
81 3300009094 Ga0111539_10026771 Ga0111539_100267716 317
82 3300025925 Ga0207650_10186904 Ga0207650_101869041 317
83 3300028556 Ga0265337_1005869 Ga0265337_10058692 317
84 3300028573 Ga0265334_10003044 Ga0265334_100030444 317
85 3300028800 Ga0265338_10004201 Ga0265338_100042015 317
86 3300031711 Ga0265314_10042689 Ga0265314_100426892 317
87 3300034816 Ga0373930_0019611 Ga0373930_0019611_286_1290 317
88 3300035172 Ga0373955_0072354 Ga0373955_0072354_617_1609 317
89 3300035410 Ga0373924_0023440 Ga0373924_0023440_196_1188 317
90 3300035691 Ga0373931_0058016 Ga0373931_0058016_373_1377 317
91 3300035724 Ga0373933_0131005 Ga0373933_0131005_73_1065 317
92 3300036401 Ga0373937_0064451 Ga0373937_0064451_1548_2540 317
93 3300037068 Ga0373925_0133893 Ga0373925_0133893_224_1216 317
94 3300046459 Ga0495629_0214211 Ga0495629_0214211_300_1292 317
95 3300046472 Ga0495580_0196687 Ga0495580_0196687_201_1193 317
96 3300046473 Ga0495582_0036410 Ga0495582_0036410_877_1869 317
97 3300046475 Ga0495639_0154285 Ga0495639_0154285_25_1017 317
98 3300046531 Ga0495665_0020313 Ga0495665_0020313_1167_2159 317
99 3300046535 Ga0495586_0089423 Ga0495586_0089423_292_1284 317
100 3300046559 Ga0495667_0128911 Ga0495667_0128911_541_1533 317
101 3300046559 Ga0495667_0166944 Ga0495667_0166944_387_1379 317
102 3300048929 Ga0496126_0000035 Ga0496126_0000035_336955_337911 317
103 3300049590 Ga0501074_0192287 Ga0501074_0192287_104_1096 317
104 3300050511 nmdc:mga08y16_111856_c1 nmdc:mga08y16_111856_c1_981_1973 317
105 3300053100 Ga0500660_053531 Ga0500660_053531_656_1621 317
106 3300053161 Ga0500634_0003530 Ga0500634_0003530_1759_2772 317
107 3300005434 Ga0070709_10034118 Ga0070709_100341182 318
108 3300005435 Ga0070714_100004215 Ga0070714_10000421512 318
109 3300005437 Ga0070710_10005273 Ga0070710_100052732 318
110 3300005617 Ga0068859_100042623 Ga0068859_1000426234 318
111 3300005618 Ga0068864_100136338 Ga0068864_1001363382 318
112 3300005844 Ga0068862_100061569 Ga0068862_1000615692 318
113 3300006048 Ga0075363_100000709 Ga0075363_1000007095 318
114 3300006175 Ga0070712_100320025 Ga0070712_1003200251 318
115 3300006177 Ga0075362_10000629 Ga0075362_100006295 318
116 3300006186 Ga0075369_10003753 Ga0075369_100037533 318
117 3300006195 Ga0075366_10000099 Ga0075366_100000995 318
118 3300006353 Ga0075370_10000103 Ga0075370_100001035 318
119 3300006353 Ga0075370_10000106 Ga0075370_1000010611 318
120 3300006931 Ga0097620_100042622 Ga0097620_1000426223 318
121 3300009094 Ga0111539_10063451 Ga0111539_100634515 318
122 3300009101 Ga0105247_10018299 Ga0105247_100182993 318
123 3300009553 Ga0105249_10102625 Ga0105249_101026253 318
124 3300013308 Ga0157375_10230809 Ga0157375_102308092 318
125 3300014325 Ga0163163_10129029 Ga0163163_101290293 318
126 3300014326 Ga0157380_10081702 Ga0157380_100817023 318
127 3300014968 Ga0157379_10334110 Ga0157379_103341101 318
128 3300017792 Ga0163161_10022333 Ga0163161_100223334 318
129 3300025898 Ga0207692_10003773 Ga0207692_100037732 318
130 3300025915 Ga0207693_10106340 Ga0207693_101063402 318
131 3300025929 Ga0207664_10162458 Ga0207664_101624582 318
132 3300025933 Ga0207706_10320071 Ga0207706_103200712 318
133 3300028381 Ga0268264_10172539 Ga0268264_101725392 318
134 3300030521 Ga0307511_10000960 Ga0307511_100009605 318
135 3300030521 Ga0307511_10025580 Ga0307511_100255806 318
136 3300031507 Ga0307509_10002533 Ga0307509_100025333 318
137 3300031548 Ga0307408_100069672 Ga0307408_1000696722 318
138 3300031730 Ga0307516_10000002 Ga0307516_10000002197 318
139 3300031730 Ga0307516_10000999 Ga0307516_1000099913 318
140 3300031730 Ga0307516_10291760 Ga0307516_102917601 318
141 3300031731 Ga0307405_10018234 Ga0307405_100182344 318
142 3300031824 Ga0307413_10002050 Ga0307413_100020503 318
143 3300031852 Ga0307410_10002584 Ga0307410_100025844 318
144 3300031901 Ga0307406_10012163 Ga0307406_100121632 318
145 3300031911 Ga0307412_10002387 Ga0307412_100023872 318
146 3300031995 Ga0307409_100003679 Ga0307409_1000036793 318
147 3300032002 Ga0307416_100002403 Ga0307416_1000024035 318
148 3300032004 Ga0307414_10166970 Ga0307414_101669702 318
149 3300032005 Ga0307411_10004641 Ga0307411_100046414 318
150 3300032126 Ga0307415_100167861 Ga0307415_1001678612 318
151 3300035114 Ga0373939_0007972 Ga0373939_0007972_1283_2299 318
152 3300035118 Ga0373954_0031868 Ga0373954_0031868_602_1558 318
153 3300035695 Ga0373927_0025547 Ga0373927_0025547_2574_3530 318
154 3300035724 Ga0373933_0004180 Ga0373933_0004180_3951_4907 318
155 3300036401 Ga0373937_0002757 Ga0373937_0002757_1582_2538 318
156 3300037068 Ga0373925_0058391 Ga0373925_0058391_303_1259 318
157 3300046454 Ga0495592_0002828 Ga0495592_0002828_5800_6756 318
158 3300046459 Ga0495629_0008358 Ga0495629_0008358_3971_4927 318
159 3300046462 Ga0495651_0035128 Ga0495651_0035128_2076_3032 318
160 3300046463 Ga0495653_0026920 Ga0495653_0026920_424_1380 318
161 3300046511 Ga0495608_0013742 Ga0495608_0013742_67_1023 318
162 3300046517 Ga0495630_0157111 Ga0495630_0157111_459_1415 318
163 3300046529 Ga0495652_0002006 Ga0495652_0002006_19326_20282 318
164 3300046533 Ga0495640_0011972 Ga0495640_0011972_4481_5437 318
165 3300046543 Ga0495645_0080910 Ga0495645_0080910_813_1769 318
166 3300046557 Ga0495622_0014616 Ga0495622_0014616_678_1694 318
167 3300046559 Ga0495667_0001348 Ga0495667_0001348_11302_12258 318
168 3300046642 Ga0495634_0013598 Ga0495634_0013598_4183_5139 318
169 3300046663 Ga0495635_0013926 Ga0495635_0013926_1707_2663 318
170 3300046678 Ga0495599_0002851 Ga0495599_0002851_2709_3665 318
171 3300046679 Ga0495623_0006500 Ga0495623_0006500_2233_3189 318
172 3300046680 Ga0495646_0006529 Ga0495646_0006529_1561_2517 318
173 3300047317 Ga0495604_0016074 Ga0495604_0016074_1950_2906 318
174 3300047322 Ga0495680_0015132 Ga0495680_0015132_1752_2708 318
175 3300047444 Ga0495675_0006719 Ga0495675_0006719_1604_2560 318
176 3300047470 Ga0495681_0000927 Ga0495681_0000927_8820_9836 318
177 3300048088 Ga0495602_0004601 Ga0495602_0004601_12911_13867 318
178 3300049459 Ga0495678_019460 Ga0495678_019460_645_1661 318
179 3300049571 Ga0501034_0314451 Ga0501034_0314451_359_1375 318
180 3300050489 nmdc:mga03683_81_c1 nmdc:mga03683_81_c1_28672_29688 318
181 3300050490 nmdc:mga03n38_7683_c1 nmdc:mga03n38_7683_c1_19_1035 318
182 3300050493 nmdc:mga0k408_5_c2 nmdc:mga0k408_5_c2_5960_6976 318
183 3300050496 nmdc:mga07m45_158_c1 nmdc:mga07m45_158_c1_19882_20898 318
184 3300050496 nmdc:mga07m45_225_c1 nmdc:mga07m45_225_c1_11052_12068 318
185 3300050509 nmdc:mga0qj67_333424_c1 nmdc:mga0qj67_333424_c1_137_1096 318
186 3300050516 nmdc:mga0sz30_3640_c1 nmdc:mga0sz30_3640_c1_2161_3177 318
187 3300053078 Ga0495612_0006967 Ga0495612_0006967_2796_3752 318
188 3300053084 Ga0495595_0001316 Ga0495595_0001316_1855_2811 318
189 3300053085 Ga0495619_0000949 Ga0495619_0000949_2762_3718 318
190 3300053087 Ga0500643_005739 Ga0500643_005739_2176_3192 318
191 3300053108 Ga0500562_000266 Ga0500562_000266_11018_12034 318
192 3300053133 Ga0500655_002971 Ga0500655_002971_2005_3021 318
193 3300053134 Ga0500658_0015804 Ga0500658_0015804_1757_2773 318
194 3300053136 Ga0500559_0013239 Ga0500559_0013239_983_1999 318
195 3300053148 Ga0500590_092807 Ga0500590_092807_335_1351 318
196 3300053153 Ga0500616_0142594 Ga0500616_0142594_97_1053 318
197 3300053156 Ga0500622_0004471 Ga0500622_0004471_2978_3994 318
198 3300053724 Ga0500570_000868 Ga0500570_000868_5274_6290 318
199 3300053735 Ga0500596_002864 Ga0500596_002864_1809_2825 318
200 3300001979 JGI24740J21852_10007140 JGI24740J21852_100071403 320
201 3300001989 JGI24739J22299_10003275 JGI24739J22299_100032753 320
202 3300001990 JGI24737J22298_10005069 JGI24737J22298_100050693 320
203 3300005455 Ga0070663_100005712 Ga0070663_1000057126 320
204 3300005539 Ga0068853_100059516 Ga0068853_1000595162 320
205 3300005563 Ga0068855_100018872 Ga0068855_10001887210 320
206 3300005563 Ga0068855_100119160 Ga0068855_1001191602 320
207 3300005577 Ga0068857_100003393 Ga0068857_1000033936 320
208 3300005577 Ga0068857_100012015 Ga0068857_1000120152 320
209 3300005578 Ga0068854_100010011 Ga0068854_1000100112 320
210 3300005578 Ga0068854_100060997 Ga0068854_1000609971 320
211 3300005614 Ga0068856_100019158 Ga0068856_1000191583 320
212 3300005614 Ga0068856_100042219 Ga0068856_1000422193 320
213 3300005616 Ga0068852_100008405 Ga0068852_1000084053 320
214 3300005616 Ga0068852_100100781 Ga0068852_1001007812 320
215 3300005834 Ga0068851_10001384 Ga0068851_100013841 320
216 3300005834 Ga0068851_10032291 Ga0068851_100322912 320
217 3300009093 Ga0105240_10012741 Ga0105240_100127413 320
218 3300009093 Ga0105240_10024020 Ga0105240_100240206 320
219 3300009174 Ga0105241_10002223 Ga0105241_100022236 320
220 3300009551 Ga0105238_10005872 Ga0105238_100058724 320
221 3300009551 Ga0105238_10026487 Ga0105238_100264872 320
222 3300010375 Ga0105239_10006765 Ga0105239_100067656 320
223 3300010375 Ga0105239_10014460 Ga0105239_100144603 320
224 3300025904 Ga0207647_10001898 Ga0207647_1000189810 320
225 3300025911 Ga0207654_10000317 Ga0207654_1000031725 320
226 3300025913 Ga0207695_10000713 Ga0207695_1000071338 320
227 3300025913 Ga0207695_10029144 Ga0207695_100291444 320
228 3300025924 Ga0207694_10000155 Ga0207694_1000015541 320
229 3300025924 Ga0207694_10019100 Ga0207694_100191004 320
230 3300025949 Ga0207667_10026865 Ga0207667_100268654 320
231 3300025981 Ga0207640_10002792 Ga0207640_100027925 320
232 3300025981 Ga0207640_10060497 Ga0207640_100604972 320
233 3300026041 Ga0207639_10067677 Ga0207639_100676772 320
234 3300026067 Ga0207678_10050408 Ga0207678_100504083 320
235 3300026067 Ga0207678_10101946 Ga0207678_101019462 320
236 3300026078 Ga0207702_10000022 Ga0207702_1000002229 320
237 3300026116 Ga0207674_10012438 Ga0207674_100124388 320
238 3300026116 Ga0207674_10013910 Ga0207674_100139103 320

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

151

324

0.99

PF00389

2-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

43

353

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.9484 108 291
7cvp-assembly1.cif.gz_B the crystal structure of human phgdh from biortus. 0.9316 108 304
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.9147 108 291
4s1v-assembly1.cif.gz_B crystal structure of phosphoglycerate oxidoreductase from vibrio cholerae o395 0.9057 4 313
3gg9-assembly2.cif.gz_C crystal structure of putative d-3-phosphoglycerate dehydrogenase oxidoreductase from ralstonia solanacearum 0.8986 4 318
ID Description Score Start End Superfamily
af_Q4CQU6_365_588_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9576 147 175 3.50.50.60
af_Q9VII9_150_293_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9498 144 286 3.40.50.720
af_Q2FVW4_141_284_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9466 143 286 3.40.50.720
4s1vD02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9458 108 291 3.40.50.720
af_Q2FZW9_121_261_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9449 147 286 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7X1U1R9-F1-model_v4 D-2-hydroxyacid dehydrogenase family protein 0.9758 112 316 GO:0016614
GO:0051287
AF-A0A6I1L6U1-F1-model_v4 Hydroxypyruvate reductase 0.9697 119 320 GO:0016616
GO:0051287
AF-A0A139AQP2-F1-model_v4 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding domain-containing protein 0.9653 58 295 GO:0016491
GO:0051287
AF-A0A2E5T262-F1-model_v4 Hydroxyacid dehydrogenase 0.964 4 318 GO:0016616
GO:0051287
AF-A0A1C3NYR9-F1-model_v4 Phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.9634 83 319 GO:0004617
GO:0051287

Feature Viewer

pLDDT pTM Quality
94.1 0.86 High
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Predicted Structure (AlphaFold2)

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