F350683

General Info

Members Datasets Scaffolds Average Seq Length
238 175 476 276

Family's Representative Sequence

Representative Sequence 3300005364|Ga0070673_100107556|Ga0070673_1001075563
Length 305
Sequence MTAGAVQVSQVAQDTSSPQPPPARGGGVSLAGPLPAPVRKVARSSFRGDRVAGGERAIPEETPIALTYNRSAYAVMLATPADLEDFAIGFSLTEGIARSGADIEELDIVPTEAGIELRMWLAADRLDRVTQRQRRLAGPSGCGLCGLESLADAVRTPPRVVSSRRFDAAAIHAAMASLPAAQTLNQQTHAVHAAGFWHPQRGLVALREDVGRHNALDKLAGAMARDGGAVSDGLLLLSSRISVEMVQKAAMLGAPIVVAVSAPTALAVRIAEAAGITLVGIARSDGFEVFTHPERIIAQQVQHVA

Samples

Sample ID Description Type Environment
1 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
63 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
64 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
65 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
66 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
67 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
68 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
69 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
70 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
71 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
72 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
73 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
74 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
75 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
76 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
77 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
78 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
89 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
90 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
91 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
92 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
93 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
94 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
95 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
96 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
97 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
98 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
99 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
100 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
101 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
104 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
105 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
106 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
107 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
110 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
111 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
112 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
113 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
114 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
115 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
116 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
119 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
120 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
130 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
131 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
153 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
154 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
155 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
156 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
157 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
158 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
159 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
161 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
162 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
163 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
164 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
165 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
166 2738541293 Rhizobium sp. GV031 Isolate Unclassified
167 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
168 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
169 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
170 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
171 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
172 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
173 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
174 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
175 2909042592 Labrys sp. LIt4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.12
Metatranscriptomes 0.42
Isolates 5.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.62
Nodule 1.68
Rhizoplane 2.1
Rhizosphere 85.29
Stem 0
Stem Tuber 0
Unclassified 0.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070673_100107556 3300005364 Bacteria 2307
2 JGI25153J46596_10000905 3300003215 Bacteria 18021
3 Ga0070683_100016602 3300005329 Bacteria 6497
4 Ga0070683_100019083 3300005329 Bacteria 6085
5 Ga0070683_100087477 3300005329 Bacteria 2922
6 Ga0070670_100466912 3300005331 Bacteria 1120
7 Ga0070666_10067849 3300005335 Bacteria 2422
8 Ga0070691_10022425 3300005341 Bacteria 2929
9 Ga0070687_100028650 3300005343 Bacteria 2703
10 Ga0070661_100112933 3300005344 Bacteria 2030
11 Ga0070673_100055871 3300005364 Bacteria 3112
12 Ga0070688_100044911 3300005365 Bacteria 2727
13 Ga0070709_10052039 3300005434 Bacteria 2572
14 Ga0070713_100013765 3300005436 Bacteria 5983
15 Ga0070713_100028917 3300005436 Bacteria 4380
16 Ga0070713_100508192 3300005436 Bacteria 1138
17 Ga0070678_100253657 3300005456 Bacteria 1476
18 Ga0068867_100530711 3300005459 Bacteria 1016
19 Ga0070679_100019685 3300005530 Bacteria 6568
20 Ga0070684_100133447 3300005535 Bacteria 2241
21 Ga0070684_100168809 3300005535 Bacteria 1987
22 Ga0070665_100450234 3300005548 Bacteria 1297
23 Ga0070664_100010308 3300005564 Bacteria 7584
24 Ga0070664_100087568 3300005564 Bacteria 2693
25 Ga0068856_100142727 3300005614 Bacteria 2402
26 Ga0068852_100022054 3300005616 Bacteria 5098
27 Ga0068859_100258759 3300005617 Bacteria 1831
28 Ga0068859_100286027 3300005617 Bacteria 1741
29 Ga0068861_100489821 3300005719 Bacteria 1109
30 Ga0070717_10019102 3300006028 Bacteria 5367
31 Ga0070717_10080026 3300006028 Bacteria 2741
32 Ga0097621_100230826 3300006237 Bacteria 1616
33 Ga0097620_100258771 3300006931 Bacteria 1831
34 Ga0097620_100286036 3300006931 Bacteria 1741
35 Ga0105240_10675216 3300009093 Bacteria 1130
36 Ga0105245_10046127 3300009098 Bacteria 3894
37 Ga0105242_10030990 3300009176 Bacteria 4271
38 Ga0105242_10205017 3300009176 Bacteria 1753
39 Ga0105248_10760895 3300009177 Bacteria 1093
40 Ga0105237_10083088 3300009545 Bacteria 3194
41 Ga0105238_10058263 3300009551 Bacteria 3872
42 Ga0105239_10241001 3300010375 Bacteria 2029
43 Ga0105239_10843969 3300010375 Bacteria 1050
44 Ga0105246_10120006 3300011119 Bacteria 1947
45 Ga0157369_10290895 3300013105 Bacteria 1701
46 Ga0157374_10271433 3300013296 Bacteria 1672
47 Ga0157374_10383855 3300013296 Bacteria 1399
48 Ga0163162_10252013 3300013306 Bacteria 1897
49 Ga0157372_10019704 3300013307 Bacteria 7271
50 Ga0157372_10850426 3300013307 Bacteria 1059
51 Ga0157375_10021776 3300013308 Bacteria 5886
52 Ga0163163_10014423 3300014325 Bacteria 7263
53 Ga0182008_10018592 3300014497 Bacteria 3597
54 Ga0157379_10364756 3300014968 Bacteria 1324
55 Ga0224712_10013046 3300022467 Bacteria 2634
56 Ga0207692_10085116 3300025898 Bacteria 1700
57 Ga0207643_10293176 3300025908 Bacteria 1011
58 Ga0207693_10006458 3300025915 Bacteria 9719
59 Ga0207693_10225812 3300025915 Bacteria 1471
60 Ga0207693_10228306 3300025915 Bacteria 1462
61 Ga0207662_10013449 3300025918 Bacteria 4578
62 Ga0207700_10083802 3300025928 Bacteria 2497
63 Ga0207700_10195903 3300025928 Bacteria 1700
64 Ga0207664_10142374 3300025929 Bacteria 2030
65 Ga0207664_10345418 3300025929 Bacteria 1316
66 Ga0207706_10249056 3300025933 Bacteria 1552
67 Ga0207686_10016811 3300025934 Bacteria 4109
68 Ga0207686_10296386 3300025934 Bacteria 1199
69 Ga0207709_10120172 3300025935 Bacteria 1773
70 Ga0207670_10311968 3300025936 Bacteria 1235
71 Ga0207691_10116862 3300025940 Bacteria 2367
72 Ga0207689_10141537 3300025942 Bacteria 1981
73 Ga0207661_10009369 3300025944 Bacteria 7019
74 Ga0207661_10183551 3300025944 Bacteria 1829
75 Ga0207661_10434934 3300025944 Bacteria 1193
76 Ga0207712_10130262 3300025961 Bacteria 1916
77 Ga0207658_10040081 3300025986 Bacteria 3384
78 Ga0207658_10258962 3300025986 Bacteria 1482
79 Ga0207658_10288801 3300025986 Bacteria 1409
80 Ga0207648_10636095 3300026089 Bacteria 985
81 Ga0207674_10166025 3300026116 Bacteria 2162
82 Ga0207683_10143073 3300026121 Bacteria 2155
83 Ga0207683_10220822 3300026121 Bacteria 1727
84 Ga0207698_10007155 3300026142 Bacteria 6990
85 Ga0268264_10343532 3300028381 Bacteria 1418
86 Ga0307408_100115560 3300031548 Bacteria 2070
87 Ga0373926_0009429 3300035083 Bacteria 3264
88 Ga0373923_0044776 3300035111 Bacteria 1836
89 Ga0373936_0039740 3300035113 Bacteria 1883
90 Ga0373953_0141543 3300035117 Bacteria 1029
91 Ga0373954_0030449 3300035118 Bacteria 2488
92 Ga0373954_0069840 3300035118 Bacteria 1668
93 Ga0373956_0039062 3300035119 Bacteria 2102
94 Ga0373956_0103265 3300035119 Bacteria 1324
95 Ga0373957_0011863 3300035120 Bacteria 2919
96 Ga0373960_0012976 3300035121 Bacteria 2081
97 Ga0373943_0146590 3300035170 Bacteria 1276
98 Ga0373946_0266246 3300035171 Bacteria 840
99 Ga0373924_0013398 3300035410 Bacteria 3081
100 Ga0373931_0010573 3300035691 Bacteria 4437
101 Ga0373935_0039859 3300035692 Bacteria 2946
102 Ga0373933_0084320 3300035724 Bacteria 1952
103 Ga0373947_0056134 3300035725 Bacteria 2380
104 Ga0373947_0208033 3300035725 Bacteria 1282
105 Ga0373937_0016923 3300036401 Bacteria 6483
106 Ga0373937_0273829 3300036401 Bacteria 1593
107 Ga0373937_0334531 3300036401 Bacteria 1433
108 Ga0373925_0043115 3300037068 Bacteria 3348
109 Ga0373925_0107843 3300037068 Bacteria 2148
110 Ga0373925_0116090 3300037068 Bacteria 2073
111 Ga0373925_0169666 3300037068 Bacteria 1722
112 Ga0373925_0193619 3300037068 Bacteria 1614
113 Ga0436364_0785146 3300037853 Bacteria 3359
114 Ga0436365_0311965 3300039437 Bacteria 2557
115 Ga0436365_1914438 3300039437 Bacteria 2715
116 Ga0436361_0411292 3300039447 Bacteria 973
117 Ga0466957_0178778 3300044842 Bacteria 1385
118 Ga0451576_0001218 3300045051 Bacteria 45828
119 Ga0451576_0047770 3300045051 Bacteria 4499
120 Ga0451576_0267717 3300045051 Bacteria 1786
121 Ga0466967_0186748 3300045976 Bacteria 1957
122 Ga0466967_0471722 3300045976 Bacteria 1229
123 Ga0495592_0036990 3300046454 Bacteria 3675
124 Ga0495592_0204850 3300046454 Bacteria 1329
125 Ga0495629_0026770 3300046459 Bacteria 4095
126 Ga0495629_0051230 3300046459 Bacteria 2889
127 Ga0495629_0073132 3300046459 Bacteria 2394
128 Ga0495629_0187569 3300046459 Bacteria 1432
129 Ga0495653_0026126 3300046463 Bacteria 4686
130 Ga0495653_0079297 3300046463 Bacteria 2432
131 Ga0495653_0333268 3300046463 Bacteria 980
132 Ga0495580_0021167 3300046472 Bacteria 4801
133 Ga0495580_0393494 3300046472 Bacteria 935
134 Ga0495639_0017343 3300046475 Bacteria 3127
135 Ga0495639_0213326 3300046475 Bacteria 947
136 Ga0495664_0003284 3300046477 Bacteria 8793
137 Ga0495594_0007451 3300046499 Bacteria 5631
138 Ga0495594_0024443 3300046499 Bacteria 3245
139 Ga0495594_0046417 3300046499 Unclassified 2386
140 Ga0495594_0142784 3300046499 Bacteria 1358
141 Ga0495606_0161242 3300046507 Bacteria 1308
142 Ga0495608_0012764 3300046511 Bacteria 5829
143 Ga0495610_0002085 3300046512 Bacteria 17076
144 Ga0495628_0158924 3300046516 Bacteria 1718
145 Ga0495628_0466508 3300046516 Bacteria 915
146 Ga0495630_0012883 3300046517 Bacteria 6075
147 Ga0495632_0001010 3300046519 Bacteria 24398
148 Ga0495643_0071795 3300046522 Bacteria 1816
149 Ga0495666_0068975 3300046526 Bacteria 1683
150 Ga0495642_0152430 3300046528 Bacteria 1000
151 Ga0495652_0152515 3300046529 Bacteria 1803
152 Ga0495640_0371522 3300046533 Bacteria 881
153 Ga0495586_0125751 3300046535 Bacteria 1434
154 Ga0495587_0010926 3300046536 Bacteria 5762
155 Ga0495645_0001197 3300046543 Bacteria 17728
156 Ga0495645_0097028 3300046543 Bacteria 2099
157 Ga0495667_0004846 3300046559 Bacteria 9094
158 Ga0495667_0094271 3300046559 Bacteria 1938
159 Ga0495634_0325255 3300046642 Bacteria 925
160 Ga0495588_0040186 3300046674 Bacteria 2385
161 Ga0495657_0053645 3300046675 Bacteria 2697
162 Ga0495657_0057700 3300046675 Bacteria 2580
163 Ga0495599_0033964 3300046678 Bacteria 3206
164 Ga0495599_0075846 3300046678 Bacteria 2099
165 Ga0495646_0083236 3300046680 Bacteria 1860
166 Ga0495658_0002488 3300046683 Bacteria 9268
167 Ga0495613_0019827 3300046689 Bacteria 5012
168 Ga0495600_0039375 3300046809 Bacteria 3078
169 Ga0495581_0013416 3300047315 Bacteria 4752
170 Ga0495604_0083014 3300047317 Bacteria 2395
171 Ga0495674_0129893 3300047319 Bacteria 2123
172 Ga0495674_0276292 3300047319 Bacteria 1377
173 Ga0495680_0050283 3300047322 Bacteria 3260
174 Ga0495675_0129722 3300047444 Bacteria 1567
175 Ga0495684_0042876 3300047471 Bacteria 3465
176 Ga0495684_0220259 3300047471 Bacteria 1391
177 Ga0495686_0022194 3300047472 Bacteria 4202
178 Ga0495602_0078280 3300048088 Bacteria 2793
179 Ga0495602_0179680 3300048088 Bacteria 1633
180 Ga0496104_0117270 3300048907 Bacteria 2555
181 Ga0496108_0127824 3300048911 Bacteria 2183
182 Ga0496109_0074855 3300048912 Bacteria 3113
183 Ga0496112_0020089 3300048915 Bacteria 6323
184 Ga0496113_0048702 3300048916 Bacteria 3154
185 Ga0496119_0172821 3300048922 Bacteria 1140
186 Ga0496124_0121110 3300048927 Bacteria 2091
187 Ga0496125_0165745 3300048928 Bacteria 1493
188 Ga0496126_0010967 3300048929 Bacteria 9437
189 Ga0495678_014908 3300049459 Bacteria 3599
190 Ga0501032_0016963 3300049569 Bacteria 5118
191 Ga0501033_0029978 3300049570 Bacteria 4089
192 Ga0501034_0095705 3300049571 Bacteria 2966
193 Ga0501036_0067600 3300049572 Bacteria 3024
194 Ga0501036_0101574 3300049572 Bacteria 2433
195 Ga0501036_0314909 3300049572 Bacteria 1308
196 Ga0501038_0161372 3300049574 Bacteria 1821
197 Ga0501043_0009397 3300049579 Bacteria 7677
198 Ga0501043_0126538 3300049579 Bacteria 2004
199 Ga0501047_0036464 3300049581 Bacteria 4752
200 Ga0501067_0030235 3300049583 Bacteria 3004
201 Ga0501068_0058396 3300049584 Bacteria 2341
202 Ga0501070_0210743 3300049586 Bacteria 1595
203 Ga0501073_0102622 3300049589 Bacteria 1986
204 Ga0501073_0120741 3300049589 Bacteria 1816
205 Ga0501077_0100627 3300049593 Bacteria 1831
206 Ga0501080_0012644 3300049742 Bacteria 7740
207 Ga0501081_0299808 3300049743 Bacteria 1179
208 Ga0501083_0343770 3300049744 Bacteria 970
209 Ga0501035_0039926 3300049822 Bacteria 4244
210 Ga0501044_0026061 3300049823 Bacteria 6192
211 Ga0501044_0246941 3300049823 Bacteria 1727
212 Ga0501044_0321095 3300049823 Bacteria 1473
213 Ga0495601_0001836 3300053077 Bacteria 11792
214 Ga0495612_0016873 3300053078 Bacteria 2925
215 Ga0495619_0064657 3300053085 Bacteria 2439
216 Ga0500643_000258 3300053087 Bacteria 47298
217 Ga0500643_017559 3300053087 Bacteria 2394
218 Ga0500641_0000126 3300053096 Bacteria 28650
219 Ga0500556_0002015 3300053104 Bacteria 7103
220 Ga0500618_015593 3300053125 Bacteria 1916
221 Ga0500588_0055336 3300053146 Bacteria 1253
222 Ga0500604_0051494 3300053151 Bacteria 1272
223 Ga0500616_0014688 3300053153 Bacteria 4492
224 Ga0500622_0003777 3300053156 Bacteria 9878
225 Ga0500645_018968 3300053730 Bacteria 2143
226 2509147655 2508501128 Bacteria 8613869
227 2513703558 2513237102 Bacteria 7703324
228 2585843049 2585427594 Bacteria 6180594
229 2738804751 2738541293 Bacteria 7065685
230 2824620263 2824617872 Bacteria 8814715
231 2824629528 2824626560 Bacteria 8813858
232 2824635848 2824635225 Bacteria 8785348
233 2824646150 2824644064 Bacteria 8743947
234 2824716652 2824714736 Bacteria 8717648
235 2824726609 2824723954 Bacteria 8758240
236 2874617360 2874612657 Bacteria 8252029
237 2881368263 2881364244 Bacteria 7710352
238 2909046615 2909042592 Bacteria 6499737
239 Ga0070673_100107556
240 JGI25153J46596_10000905
241 Ga0070683_100016602
242 Ga0070683_100019083
243 Ga0070683_100087477
244 Ga0070670_100466912
245 Ga0070666_10067849
246 Ga0070691_10022425
247 Ga0070687_100028650
248 Ga0070661_100112933
249 Ga0070673_100055871
250 Ga0070688_100044911
251 Ga0070709_10052039
252 Ga0070713_100013765
253 Ga0070713_100028917
254 Ga0070713_100508192
255 Ga0070678_100253657
256 Ga0068867_100530711
257 Ga0070679_100019685
258 Ga0070684_100133447
259 Ga0070684_100168809
260 Ga0070665_100450234
261 Ga0070664_100010308
262 Ga0070664_100087568
263 Ga0068856_100142727
264 Ga0068852_100022054
265 Ga0068859_100258759
266 Ga0068859_100286027
267 Ga0068861_100489821
268 Ga0070717_10019102
269 Ga0070717_10080026
270 Ga0097621_100230826
271 Ga0097620_100258771
272 Ga0097620_100286036
273 Ga0105240_10675216
274 Ga0105245_10046127
275 Ga0105242_10030990
276 Ga0105242_10205017
277 Ga0105248_10760895
278 Ga0105237_10083088
279 Ga0105238_10058263
280 Ga0105239_10241001
281 Ga0105239_10843969
282 Ga0105246_10120006
283 Ga0157369_10290895
284 Ga0157374_10271433
285 Ga0157374_10383855
286 Ga0163162_10252013
287 Ga0157372_10019704
288 Ga0157372_10850426
289 Ga0157375_10021776
290 Ga0163163_10014423
291 Ga0182008_10018592
292 Ga0157379_10364756
293 Ga0224712_10013046
294 Ga0207692_10085116
295 Ga0207643_10293176
296 Ga0207693_10006458
297 Ga0207693_10225812
298 Ga0207693_10228306
299 Ga0207662_10013449
300 Ga0207700_10083802
301 Ga0207700_10195903
302 Ga0207664_10142374
303 Ga0207664_10345418
304 Ga0207706_10249056
305 Ga0207686_10016811
306 Ga0207686_10296386
307 Ga0207709_10120172
308 Ga0207670_10311968
309 Ga0207691_10116862
310 Ga0207689_10141537
311 Ga0207661_10009369
312 Ga0207661_10183551
313 Ga0207661_10434934
314 Ga0207712_10130262
315 Ga0207658_10040081
316 Ga0207658_10258962
317 Ga0207658_10288801
318 Ga0207648_10636095
319 Ga0207674_10166025
320 Ga0207683_10143073
321 Ga0207683_10220822
322 Ga0207698_10007155
323 Ga0268264_10343532
324 Ga0307408_100115560
325 Ga0373926_0009429
326 Ga0373923_0044776
327 Ga0373936_0039740
328 Ga0373953_0141543
329 Ga0373954_0030449
330 Ga0373954_0069840
331 Ga0373956_0039062
332 Ga0373956_0103265
333 Ga0373957_0011863
334 Ga0373960_0012976
335 Ga0373943_0146590
336 Ga0373946_0266246
337 Ga0373924_0013398
338 Ga0373931_0010573
339 Ga0373935_0039859
340 Ga0373933_0084320
341 Ga0373947_0056134
342 Ga0373947_0208033
343 Ga0373937_0016923
344 Ga0373937_0273829
345 Ga0373937_0334531
346 Ga0373925_0043115
347 Ga0373925_0107843
348 Ga0373925_0116090
349 Ga0373925_0169666
350 Ga0373925_0193619
351 Ga0436364_0785146
352 Ga0436365_0311965
353 Ga0436365_1914438
354 Ga0436361_0411292
355 Ga0466957_0178778
356 Ga0451576_0001218
357 Ga0451576_0047770
358 Ga0451576_0267717
359 Ga0466967_0186748
360 Ga0466967_0471722
361 Ga0495592_0036990
362 Ga0495592_0204850
363 Ga0495629_0026770
364 Ga0495629_0051230
365 Ga0495629_0073132
366 Ga0495629_0187569
367 Ga0495653_0026126
368 Ga0495653_0079297
369 Ga0495653_0333268
370 Ga0495580_0021167
371 Ga0495580_0393494
372 Ga0495639_0017343
373 Ga0495639_0213326
374 Ga0495664_0003284
375 Ga0495594_0007451
376 Ga0495594_0024443
377 Ga0495594_0046417
378 Ga0495594_0142784
379 Ga0495606_0161242
380 Ga0495608_0012764
381 Ga0495610_0002085
382 Ga0495628_0158924
383 Ga0495628_0466508
384 Ga0495630_0012883
385 Ga0495632_0001010
386 Ga0495643_0071795
387 Ga0495666_0068975
388 Ga0495642_0152430
389 Ga0495652_0152515
390 Ga0495640_0371522
391 Ga0495586_0125751
392 Ga0495587_0010926
393 Ga0495645_0001197
394 Ga0495645_0097028
395 Ga0495667_0004846
396 Ga0495667_0094271
397 Ga0495634_0325255
398 Ga0495588_0040186
399 Ga0495657_0053645
400 Ga0495657_0057700
401 Ga0495599_0033964
402 Ga0495599_0075846
403 Ga0495646_0083236
404 Ga0495658_0002488
405 Ga0495613_0019827
406 Ga0495600_0039375
407 Ga0495581_0013416
408 Ga0495604_0083014
409 Ga0495674_0129893
410 Ga0495674_0276292
411 Ga0495680_0050283
412 Ga0495675_0129722
413 Ga0495684_0042876
414 Ga0495684_0220259
415 Ga0495686_0022194
416 Ga0495602_0078280
417 Ga0495602_0179680
418 Ga0496104_0117270
419 Ga0496108_0127824
420 Ga0496109_0074855
421 Ga0496112_0020089
422 Ga0496113_0048702
423 Ga0496119_0172821
424 Ga0496124_0121110
425 Ga0496125_0165745
426 Ga0496126_0010967
427 Ga0495678_014908
428 Ga0501032_0016963
429 Ga0501033_0029978
430 Ga0501034_0095705
431 Ga0501036_0067600
432 Ga0501036_0101574
433 Ga0501036_0314909
434 Ga0501038_0161372
435 Ga0501043_0009397
436 Ga0501043_0126538
437 Ga0501047_0036464
438 Ga0501067_0030235
439 Ga0501068_0058396
440 Ga0501070_0210743
441 Ga0501073_0102622
442 Ga0501073_0120741
443 Ga0501077_0100627
444 Ga0501080_0012644
445 Ga0501081_0299808
446 Ga0501083_0343770
447 Ga0501035_0039926
448 Ga0501044_0026061
449 Ga0501044_0246941
450 Ga0501044_0321095
451 Ga0495601_0001836
452 Ga0495612_0016873
453 Ga0495619_0064657
454 Ga0500643_000258
455 Ga0500643_017559
456 Ga0500641_0000126
457 Ga0500556_0002015
458 Ga0500618_015593
459 Ga0500588_0055336
460 Ga0500604_0051494
461 Ga0500616_0014688
462 Ga0500622_0003777
463 Ga0500645_018968
464 2509147655
465 2513703558
466 2585843049
467 2738804751
468 2824620263
469 2824629528
470 2824635848
471 2824646150
472 2824716652
473 2824726609
474 2874617360
475 2881368263
476 2909046615

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02634

FdhD-NarQ

FdhD/NarQ family

59

297

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zcz-assembly1.cif.gz_A crystal structure of phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase (tm1249) from thermotoga maritima at 1.88 a resolution 0.8458 162 248
1q2v-assembly1.cif.gz_A crystal structure of the chaperonin from thermococcus strain ks-1 (nucleotide-free form) 0.8433 214 254
5x9u-assembly1.cif.gz_B-4 crystal structure of group iii chaperonin in the open state 0.829 214 251
3zzm-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis purh with a novel bound nucleotide cfair, at 2.2 a resolution. 0.8209 162 240
1q3s-assembly1.cif.gz_A crystal structure of the chaperonin from thermococcus strain ks-1 (formiii crystal complexed with adp) 0.8197 213 254
ID Description Score Start End Superfamily
af_P9WNF1_130_276_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9485 134 266 3.40.140.10
af_Q2FVX3_117_265_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9273 127 269 3.40.140.10
af_P32177_133_277_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9097 124 266 3.40.140.10
af_Q7K3J0_220_364_3.50.7.10 Alpha Beta;3-Layer(bba) Sandwich;GroEL;GroEL 0.906 220 254 3.50.7.10
af_Q4E151_215_378_3.50.7.10 Alpha Beta;3-Layer(bba) Sandwich;GroEL;GroEL 0.9055 221 254 3.50.7.10
ID Description Score Start End GO Terms
AF-A0A378AZ90-F1-model_v4 Formate dehydrogenase subunit D 0.9867 32 94 GO:0005737
GO:0006777
GO:0016783
AF-A0A356E7I7-F1-model_v4 Sulfurtransferase FdhD 0.9823 19 91 GO:0005737
GO:0006777
GO:0016783
AF-A0A7Z9WBF2-F1-model_v4 Sulfurtransferase FdhD 0.9726 179 265 GO:0005737
GO:0006777
GO:0016783
AF-A0A6I2US14-F1-model_v4 deleted 0.9655 144 265
AF-X1EE38-F1-model_v4 Formate dehydrogenase family accessory protein FdhD 0.9642 179 265 GO:0005737
GO:0006777
GO:0016783

Map