F350492

General Info

Members Datasets Scaffolds Average Seq Length
237 189 474 194

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221670|2644385979
Length 227
Sequence TTPASETPAASSAAASASAVASRAERIGDAALELLVERGMRGLTHRAVDERAGLPQGSTSNHARTRQALLETAVRRQVHWEARVLTPDELPGAGGTPPTADALVDALALALHRYLTDHRALLVSRYELALEATRRPELRAFFDAAGSAFHDPLVATMTAAGSPEPERHALSLIAWCEGLMFSCAAGSFHATVPDRAELRTGFDELLRGMLGTRQDVPRGPGARRESR

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
33 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
34 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
35 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
55 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
58 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
59 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
60 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
61 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
62 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
63 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
64 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
65 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
66 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
67 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
68 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
69 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
70 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
72 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
73 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
74 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
81 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
82 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
83 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
86 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
87 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
88 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
89 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
90 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
93 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
94 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
101 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
102 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
103 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
104 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
105 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
106 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
107 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
108 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
109 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
110 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
111 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
112 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
119 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
124 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
125 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
126 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
127 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
128 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
129 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
130 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
133 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
152 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
153 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
154 2643221670 Streptomyces sp. Root431 Isolate Unclassified
155 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
156 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
157 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
158 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
159 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
160 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
161 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
162 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
163 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
164 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
165 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
166 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
167 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
168 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
169 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
170 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
171 2891562705 Microbispora tritici MT50 Isolate Unclassified
172 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
173 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
174 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
175 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
176 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
177 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
178 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
179 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
180 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
181 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
182 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
183 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
184 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
185 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
186 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
187 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
188 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
189 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.81
Metatranscriptomes 0
Isolates 15.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.27
Nodule 0
Rhizoplane 1.27
Rhizosphere 85.23
Stem 0
Stem Tuber 0
Unclassified 2.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10049228 3300001989 Bacteria 1367
2 JGI25406J46586_10010888 3300003203 Bacteria 4009
3 JGI25160J50197_1024850 3300003354 Bacteria 1690
4 Ga0070658_10277909 3300005327 Bacteria 1425
5 Ga0070670_100638969 3300005331 Unclassified 954
6 Ga0070682_100237305 3300005337 Bacteria 1307
7 Ga0070682_100322732 3300005337 Bacteria 1141
8 Ga0070709_10013068 3300005434 Bacteria 4660
9 Ga0070714_100151848 3300005435 Bacteria 2088
10 Ga0070713_100302360 3300005436 Bacteria 1473
11 Ga0070713_100484467 3300005436 Bacteria 1165
12 Ga0070710_10103386 3300005437 Bacteria 1700
13 Ga0070711_100192796 3300005439 Bacteria 1567
14 Ga0070711_100290638 3300005439 Bacteria 1296
15 Ga0070711_100469586 3300005439 Bacteria 1032
16 Ga0070663_100588736 3300005455 Bacteria 934
17 Ga0070699_100518612 3300005518 Bacteria 1083
18 Ga0068853_100144898 3300005539 Bacteria 2134
19 Ga0070665_100132834 3300005548 Bacteria 2491
20 Ga0068855_100004259 3300005563 Bacteria 17473
21 Ga0070664_100273405 3300005564 Bacteria 1522
22 Ga0068854_100034266 3300005578 Bacteria 3546
23 Ga0068852_100005055 3300005616 Bacteria 9381
24 Ga0081540_1015096 3300005983 Bacteria 4902
25 Ga0081539_10001070 3300005985 Bacteria 50023
26 Ga0070717_10093780 3300006028 Bacteria 2538
27 Ga0070716_100238123 3300006173 Bacteria 1233
28 Ga0070712_100131481 3300006175 Bacteria 1897
29 Ga0070712_100620774 3300006175 Bacteria 916
30 Ga0075436_100228696 3300006914 Bacteria 1321
31 Ga0105240_10089106 3300009093 Bacteria 3774
32 Ga0105240_10671805 3300009093 Bacteria 1133
33 Ga0105241_10058903 3300009174 Bacteria 2951
34 Ga0105237_10270301 3300009545 Bacteria 1703
35 Ga0105237_10362402 3300009545 Bacteria 1454
36 Ga0105238_10051698 3300009551 Bacteria 4133
37 Ga0157374_10009276 3300013296 Bacteria 8438
38 Ga0157372_10784208 3300013307 Bacteria 1107
39 Ga0157372_11534767 3300013307 Bacteria 767
40 Ga0213875_10008199 3300021388 Bacteria 5363
41 Ga0213875_10009912 3300021388 Bacteria 4802
42 Ga0209758_1010588 3300025297 Bacteria 5492
43 Ga0207426_1002196 3300025302 Bacteria 13130
44 Ga0207647_10007012 3300025904 Bacteria 8172
45 Ga0207699_10026459 3300025906 Bacteria 3199
46 Ga0207695_10000481 3300025913 Bacteria 85421
47 Ga0207671_10000599 3300025914 Bacteria 47962
48 Ga0207671_10271811 3300025914 Bacteria 1335
49 Ga0207663_10080661 3300025916 Bacteria 2128
50 Ga0207694_10000331 3300025924 Bacteria 44641
51 Ga0207700_10067125 3300025928 Bacteria 2744
52 Ga0207700_10406263 3300025928 Bacteria 1194
53 Ga0207664_10012618 3300025929 Bacteria 6045
54 Ga0207664_10068769 3300025929 Bacteria 2846
55 Ga0207664_10110384 3300025929 Bacteria 2287
56 Ga0207664_10301120 3300025929 Unclassified 1411
57 Ga0207664_10495894 3300025929 Bacteria 1093
58 Ga0207665_10116075 3300025939 Bacteria 1886
59 Ga0207667_10106051 3300025949 Bacteria 2899
60 Ga0207640_10731869 3300025981 Bacteria 851
61 Ga0207658_10144849 3300025986 Unclassified 1928
62 Ga0207639_10036437 3300026041 Bacteria 3646
63 Ga0207678_10513238 3300026067 Bacteria 1046
64 Ga0207702_10181339 3300026078 Bacteria 1939
65 Ga0207641_10458520 3300026088 Bacteria 1233
66 Ga0207674_10174264 3300026116 Bacteria 2103
67 Ga0207698_10019096 3300026142 Bacteria 4684
68 Ga0268266_10110926 3300028379 Bacteria 2430
69 Ga0268266_10574144 3300028379 Bacteria 1082
70 Ga0307515_10114504 3300028794 Bacteria 3116
71 Ga0307512_10004578 3300030522 Bacteria 15076
72 Ga0307512_10146710 3300030522 Bacteria 1425
73 Ga0307508_10229005 3300031616 Bacteria 1457
74 Ga0307413_10327845 3300031824 Bacteria 1172
75 Ga0307406_10285131 3300031901 Bacteria 1262
76 Ga0307507_10226575 3300033179 Bacteria 1247
77 Ga0373926_0001459 3300035083 Bacteria 7203
78 Ga0373934_0040504 3300035086 Unclassified 1838
79 Ga0373923_0005456 3300035111 Bacteria 4318
80 Ga0373936_0000227 3300035113 Bacteria 18583
81 Ga0373945_0000346 3300035116 Bacteria 13241
82 Ga0373953_0066308 3300035117 Bacteria 1483
83 Ga0373943_0004669 3300035170 Bacteria 6196
84 Ga0373943_0065204 3300035170 Bacteria 1831
85 Ga0373946_0000561 3300035171 Bacteria 12241
86 Ga0373955_0093912 3300035172 Bacteria 1713
87 Ga0373924_0042433 3300035410 Bacteria 1866
88 Ga0373935_0000459 3300035692 Bacteria 21162
89 Ga0373935_0103338 3300035692 Bacteria 1881
90 Ga0373927_0000568 3300035695 Bacteria 28191
91 Ga0373933_0027515 3300035724 Bacteria 3275
92 Ga0373947_0001246 3300035725 Bacteria 15666
93 Ga0373947_0069593 3300035725 Bacteria 2154
94 Ga0373925_0003639 3300037068 Bacteria 11877
95 Ga0395899_0252723 3300037312 Bacteria 1209
96 Ga0395900_0664162 3300037418 Bacteria 978
97 Ga0395898_0007384 3300037466 Bacteria 11661
98 Ga0436364_0691542 3300037853 Bacteria 7722
99 Ga0436364_0740164 3300037853 Bacteria 5642
100 Ga0395901_0022410 3300038443 Bacteria 6473
101 Ga0395901_0882560 3300038443 Bacteria 877
102 Ga0439449_0001593 3300042007 Bacteria 8900
103 Ga0466969_0012623 3300044656 Bacteria 4452
104 Ga0466969_0059465 3300044656 Bacteria 1858
105 Ga0466972_0002131 3300044658 Bacteria 9717
106 Ga0466972_0004282 3300044658 Bacteria 7124
107 Ga0466972_0120503 3300044658 Bacteria 1237
108 Ga0466972_0303853 3300044658 Bacteria 745
109 Ga0466965_0021900 3300044683 Bacteria 3080
110 Ga0466966_0003475 3300044684 Bacteria 10379
111 Ga0466961_0004358 3300044693 Bacteria 8867
112 Ga0466961_0007972 3300044693 Bacteria 6750
113 Ga0466961_0047223 3300044693 Bacteria 2753
114 Ga0466961_0187424 3300044693 Bacteria 1283
115 Ga0466971_0192857 3300044719 Bacteria 960
116 Ga0466968_0006948 3300044735 Bacteria 4288
117 Ga0466970_0161332 3300044765 Bacteria 1240
118 Ga0466970_0195010 3300044765 Bacteria 1126
119 Ga0466957_0089384 3300044842 Bacteria 1928
120 Ga0466960_0027097 3300044901 Bacteria 2610
121 Ga0466959_0019463 3300045049 Bacteria 4992
122 Ga0466959_0038458 3300045049 Bacteria 3536
123 Ga0466958_0043749 3300045836 Bacteria 2698
124 Ga0466958_0533873 3300045836 Bacteria 762
125 Ga0466967_0259244 3300045976 Bacteria 1663
126 Ga0466967_1088164 3300045976 Bacteria 796
127 Ga0495627_074378 3300046453 Unclassified 989
128 Ga0495592_0088841 3300046454 Bacteria 2220
129 Ga0495629_0258315 3300046459 Bacteria 1198
130 Ga0495638_0037624 3300046460 Bacteria 3078
131 Ga0495641_0017616 3300046461 Bacteria 3715
132 Ga0495651_0021757 3300046462 Bacteria 4985
133 Ga0495653_0003528 3300046463 Bacteria 12602
134 Ga0495582_0062624 3300046473 Bacteria 2055
135 Ga0495605_0090441 3300046474 Bacteria 1419
136 Ga0495662_0012189 3300046476 Bacteria 4198
137 Ga0495664_0004040 3300046477 Bacteria 8003
138 Ga0495585_0043328 3300046492 Bacteria 2518
139 Ga0495585_0171062 3300046492 Bacteria 1122
140 Ga0495594_0165369 3300046499 Bacteria 1258
141 Ga0495618_0006222 3300046514 Bacteria 7244
142 Ga0495628_0002571 3300046516 Bacteria 16333
143 Ga0495652_0019102 3300046529 Bacteria 6104
144 Ga0495652_0054375 3300046529 Bacteria 3409
145 Ga0495587_0017424 3300046536 Bacteria 4463
146 Ga0495645_0027328 3300046543 Bacteria 4145
147 Ga0495622_0000098 3300046557 Bacteria 76839
148 Ga0495667_0023459 3300046559 Bacteria 4157
149 Ga0495634_0121721 3300046642 Bacteria 1670
150 Ga0495635_0006301 3300046663 Bacteria 8265
151 Ga0495657_0147909 3300046675 Bacteria 1460
152 Ga0495613_0147463 3300046689 Bacteria 1679
153 Ga0495624_0001323 3300046690 Bacteria 19403
154 Ga0495589_0003099 3300046794 Bacteria 9098
155 Ga0495589_0011461 3300046794 Bacteria 4602
156 Ga0495600_0005573 3300046809 Bacteria 7601
157 Ga0495581_0021427 3300047315 Bacteria 3747
158 Ga0495604_0042060 3300047317 Bacteria 3582
159 Ga0495604_0139563 3300047317 Bacteria 1733
160 Ga0495674_0000725 3300047319 Bacteria 31182
161 Ga0495674_0632652 3300047319 Bacteria 845
162 Ga0495676_0005548 3300047321 Bacteria 11575
163 Ga0495676_0032283 3300047321 Bacteria 4421
164 Ga0495676_0219918 3300047321 Bacteria 1309
165 Ga0495683_0213377 3300047323 Bacteria 864
166 Ga0495675_0369255 3300047444 Bacteria 841
167 Ga0495685_003638 3300047447 Bacteria 4928
168 Ga0495685_009933 3300047447 Bacteria 3186
169 Ga0495684_0017290 3300047471 Bacteria 5551
170 Ga0495593_0028823 3300047673 Bacteria 3048
171 Ga0495602_0140520 3300048088 Bacteria 1912
172 Ga0496102_0026857 3300048905 Bacteria 5139
173 Ga0496103_0024066 3300048906 Bacteria 3674
174 Ga0496117_0007705 3300048920 Bacteria 10420
175 Ga0496118_0001229 3300048921 Bacteria 39376
176 Ga0496121_0003501 3300048924 Bacteria 22329
177 Ga0496126_0014714 3300048929 Bacteria 7894
178 Ga0501031_0286081 3300049568 Bacteria 1069
179 Ga0501032_0505969 3300049569 Bacteria 772
180 Ga0501033_0594345 3300049570 Bacteria 759
181 Ga0501034_0019082 3300049571 Bacteria 7021
182 Ga0501034_0429904 3300049571 Bacteria 1240
183 Ga0501036_0011143 3300049572 Bacteria 7439
184 Ga0501037_0505577 3300049573 Bacteria 819
185 Ga0501038_0028913 3300049574 Bacteria 4919
186 Ga0501039_0867018 3300049575 Bacteria 703
187 Ga0501041_0701506 3300049577 Bacteria 648
188 Ga0501047_0029637 3300049581 Bacteria 5276
189 Ga0501047_0070699 3300049581 Bacteria 3360
190 Ga0501047_0588314 3300049581 Bacteria 935
191 Ga0501070_0039707 3300049586 Bacteria 3924
192 Ga0501080_0140587 3300049742 Bacteria 2232
193 Ga0501035_0046311 3300049822 Bacteria 3912
194 Ga0501035_0089697 3300049822 Bacteria 2707
195 Ga0501044_0004407 3300049823 Bacteria 15750
196 Ga0501044_0062336 3300049823 Bacteria 3811
197 Ga0501044_0102867 3300049823 Bacteria 2871
198 Ga0501044_0369635 3300049823 Bacteria 1351
199 nmdc:mga08x19_92739_c1 3300050514 Bacteria 1995
200 Ga0495612_0102465 3300053078 Bacteria 1220
201 Ga0466962_0050159 3300061719 Bacteria 1995
202 2644385979 2643221670 Bacteria 6497041
203 2547409188 2547132111 Bacteria 8013147
204 2676488838 2675903060 Bacteria 10051191
205 2784586587 2784132148 Bacteria 8627943
206 2791912092 2791354901 Bacteria 8322202
207 2793984111 2791355406 Bacteria 11364898
208 2795796580 2795385472 Bacteria 6627535
209 2804843574 2802429296 Bacteria 7227771
210 2819739571 2818991472 Bacteria 10089953
211 2856745778 2856741275 Bacteria 8096094
212 2862181386 2862178590 Bacteria 8583590
213 2862509802 2862507626 Bacteria 9425308
214 2873157840 2873151551 Bacteria 8625867
215 2873317546 2873314349 Bacteria 8512634
216 2884702399 2884693830 Bacteria 11273186
217 2891396824 2891395885 Bacteria 9251614
218 2891559443 2891554331 Bacteria 8812224
219 2891563263 2891562705 Bacteria 8039471
220 2895436557 2895427314 Bacteria 13147766
221 2895451898 2895442618 Bacteria 11027144
222 2912722678 2912715099 Bacteria 9460473
223 2912729862 2912723979 Bacteria 8557534
224 2947232028 2947224130 Bacteria 9938529
225 2997603387 2997600082 Bacteria 9896405
226 3006399143 3006393351 Bacteria 6615579
227 3006498298 3006493962 Bacteria 8825450
228 8023625120 8023623736 Bacteria 8593882
229 8025418727 8025413630 Bacteria 7014048
230 8047901269 8047893842 Bacteria 11723082
231 8048135661 8048127548 Bacteria 11053136
232 8048357631 8048356638 Bacteria 11044339
233 8048378209 8048369669 Bacteria 11666822
234 8048387307 8048379754 Bacteria 11877923
235 8055068407 8055066027 Bacteria 9479577
236 8055173273 8055172936 Bacteria 9305943
237 8056832492 8056829672 Bacteria 9045328
238 JGI24739J22299_10049228
239 JGI25406J46586_10010888
240 JGI25160J50197_1024850
241 Ga0070658_10277909
242 Ga0070670_100638969
243 Ga0070682_100237305
244 Ga0070682_100322732
245 Ga0070709_10013068
246 Ga0070714_100151848
247 Ga0070713_100302360
248 Ga0070713_100484467
249 Ga0070710_10103386
250 Ga0070711_100192796
251 Ga0070711_100290638
252 Ga0070711_100469586
253 Ga0070663_100588736
254 Ga0070699_100518612
255 Ga0068853_100144898
256 Ga0070665_100132834
257 Ga0068855_100004259
258 Ga0070664_100273405
259 Ga0068854_100034266
260 Ga0068852_100005055
261 Ga0081540_1015096
262 Ga0081539_10001070
263 Ga0070717_10093780
264 Ga0070716_100238123
265 Ga0070712_100131481
266 Ga0070712_100620774
267 Ga0075436_100228696
268 Ga0105240_10089106
269 Ga0105240_10671805
270 Ga0105241_10058903
271 Ga0105237_10270301
272 Ga0105237_10362402
273 Ga0105238_10051698
274 Ga0157374_10009276
275 Ga0157372_10784208
276 Ga0157372_11534767
277 Ga0213875_10008199
278 Ga0213875_10009912
279 Ga0209758_1010588
280 Ga0207426_1002196
281 Ga0207647_10007012
282 Ga0207699_10026459
283 Ga0207695_10000481
284 Ga0207671_10000599
285 Ga0207671_10271811
286 Ga0207663_10080661
287 Ga0207694_10000331
288 Ga0207700_10067125
289 Ga0207700_10406263
290 Ga0207664_10012618
291 Ga0207664_10068769
292 Ga0207664_10110384
293 Ga0207664_10301120
294 Ga0207664_10495894
295 Ga0207665_10116075
296 Ga0207667_10106051
297 Ga0207640_10731869
298 Ga0207658_10144849
299 Ga0207639_10036437
300 Ga0207678_10513238
301 Ga0207702_10181339
302 Ga0207641_10458520
303 Ga0207674_10174264
304 Ga0207698_10019096
305 Ga0268266_10110926
306 Ga0268266_10574144
307 Ga0307515_10114504
308 Ga0307512_10004578
309 Ga0307512_10146710
310 Ga0307508_10229005
311 Ga0307413_10327845
312 Ga0307406_10285131
313 Ga0307507_10226575
314 Ga0373926_0001459
315 Ga0373934_0040504
316 Ga0373923_0005456
317 Ga0373936_0000227
318 Ga0373945_0000346
319 Ga0373953_0066308
320 Ga0373943_0004669
321 Ga0373943_0065204
322 Ga0373946_0000561
323 Ga0373955_0093912
324 Ga0373924_0042433
325 Ga0373935_0000459
326 Ga0373935_0103338
327 Ga0373927_0000568
328 Ga0373933_0027515
329 Ga0373947_0001246
330 Ga0373947_0069593
331 Ga0373925_0003639
332 Ga0395899_0252723
333 Ga0395900_0664162
334 Ga0395898_0007384
335 Ga0436364_0691542
336 Ga0436364_0740164
337 Ga0395901_0022410
338 Ga0395901_0882560
339 Ga0439449_0001593
340 Ga0466969_0012623
341 Ga0466969_0059465
342 Ga0466972_0002131
343 Ga0466972_0004282
344 Ga0466972_0120503
345 Ga0466972_0303853
346 Ga0466965_0021900
347 Ga0466966_0003475
348 Ga0466961_0004358
349 Ga0466961_0007972
350 Ga0466961_0047223
351 Ga0466961_0187424
352 Ga0466971_0192857
353 Ga0466968_0006948
354 Ga0466970_0161332
355 Ga0466970_0195010
356 Ga0466957_0089384
357 Ga0466960_0027097
358 Ga0466959_0019463
359 Ga0466959_0038458
360 Ga0466958_0043749
361 Ga0466958_0533873
362 Ga0466967_0259244
363 Ga0466967_1088164
364 Ga0495627_074378
365 Ga0495592_0088841
366 Ga0495629_0258315
367 Ga0495638_0037624
368 Ga0495641_0017616
369 Ga0495651_0021757
370 Ga0495653_0003528
371 Ga0495582_0062624
372 Ga0495605_0090441
373 Ga0495662_0012189
374 Ga0495664_0004040
375 Ga0495585_0043328
376 Ga0495585_0171062
377 Ga0495594_0165369
378 Ga0495618_0006222
379 Ga0495628_0002571
380 Ga0495652_0019102
381 Ga0495652_0054375
382 Ga0495587_0017424
383 Ga0495645_0027328
384 Ga0495622_0000098
385 Ga0495667_0023459
386 Ga0495634_0121721
387 Ga0495635_0006301
388 Ga0495657_0147909
389 Ga0495613_0147463
390 Ga0495624_0001323
391 Ga0495589_0003099
392 Ga0495589_0011461
393 Ga0495600_0005573
394 Ga0495581_0021427
395 Ga0495604_0042060
396 Ga0495604_0139563
397 Ga0495674_0000725
398 Ga0495674_0632652
399 Ga0495676_0005548
400 Ga0495676_0032283
401 Ga0495676_0219918
402 Ga0495683_0213377
403 Ga0495675_0369255
404 Ga0495685_003638
405 Ga0495685_009933
406 Ga0495684_0017290
407 Ga0495593_0028823
408 Ga0495602_0140520
409 Ga0496102_0026857
410 Ga0496103_0024066
411 Ga0496117_0007705
412 Ga0496118_0001229
413 Ga0496121_0003501
414 Ga0496126_0014714
415 Ga0501031_0286081
416 Ga0501032_0505969
417 Ga0501033_0594345
418 Ga0501034_0019082
419 Ga0501034_0429904
420 Ga0501036_0011143
421 Ga0501037_0505577
422 Ga0501038_0028913
423 Ga0501039_0867018
424 Ga0501041_0701506
425 Ga0501047_0029637
426 Ga0501047_0070699
427 Ga0501047_0588314
428 Ga0501070_0039707
429 Ga0501080_0140587
430 Ga0501035_0046311
431 Ga0501035_0089697
432 Ga0501044_0004407
433 Ga0501044_0062336
434 Ga0501044_0102867
435 Ga0501044_0369635
436 nmdc:mga08x19_92739_c1
437 Ga0495612_0102465
438 Ga0466962_0050159
439 2644385979
440 2547409188
441 2676488838
442 2784586587
443 2791912092
444 2793984111
445 2795796580
446 2804843574
447 2819739571
448 2856745778
449 2862181386
450 2862509802
451 2873157840
452 2873317546
453 2884702399
454 2891396824
455 2891559443
456 2891563263
457 2895436557
458 2895451898
459 2912722678
460 2912729862
461 2947232028
462 2997603387
463 3006399143
464 3006498298
465 8023625120
466 8025418727
467 8047901269
468 8048135661
469 8048357631
470 8048378209
471 8048387307
472 8055068407
473 8055173273
474 8056832492

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

27

73

0.95

PF17940

TetR_C_31

Tetracyclin repressor-like, C-terminal domain

98

212

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2np5-assembly1.cif.gz_A crystal structure of a transcriptional regulator (rha1_ro04179) from rhodococcus sp. rha1. 0.8556 12 192
2qko-assembly1.cif.gz_A crystal structure of transcriptional regulator rha06399 from rhodococcus sp. rha1 0.8299 11 185
2g3b-assembly1.cif.gz_A crystal structure of putative tetr-family transcriptional regulator from rhodococcus sp. 0.8293 9 185
2np5-assembly1.cif.gz_A crystal structure of a transcriptional regulator (rha1_ro04179) from rhodococcus sp. rha1. 0.8267 12 192
3crj-assembly1.cif.gz_B crystal structure of a tetr transcription regulator from haloarcula marismortui atcc 43049 0.8174 9 188
ID Description Score Start End Superfamily
2y30B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9095 12 64 1.10.10.60
3whcC01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9077 11 53 1.10.10.60
2jj7B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.891 4 53 1.10.10.60
2y31B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8772 12 63 1.10.10.60
5gpcA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8762 11 53 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A841E1S1-F1-model_v4 DNA-binding transcriptional regulator YbjK 0.9687 25 189 GO:0003677
AF-A0A6B2U6F7-F1-model_v4 deleted 0.9574 1 191
AF-A0A4R6KQ10-F1-model_v4 HTH tetR-type domain-containing protein 0.9527 1 192 GO:0003677
GO:0006355
AF-A0A4R6KQ10-F1-model_v4 HTH tetR-type domain-containing protein 0.9479 1 192 GO:0003677
GO:0006355
AF-A0A6B2U6F7-F1-model_v4 deleted 0.9477 1 191

Map