F350461

General Info

Members Datasets Scaffolds Average Seq Length
237 182 164 608

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0004099|Ga0500616_0004099_8141_10279
Length 712
Sequence MVTVHWASSMLQLQNEILVMVATGESLAHTMDTLCRGVEARLPGVVCSMLVVGGDGCLHPLAGPSLPRGYSDALDGLAPGADVGSCGSAVYLRRPVEVTDIATDPSWESLAERALKLGLRACWSTPILSRDGAALGAFAFYFREARRHTPHEAEMVQTCIHLCAIALERDRQATLQHRLAYRDMLTDLPNRAAFNRASEDPARGGSSASALLIIDLDNLKTVNDTFGHRAGDALLRSAALRIQDSVAPRVTYRLGGDEFAVLIGGETDTAQLAALAKGVIENLATPVDCDGHLIVPRATIGGAVRGASKTSEDLRQTADFALYHAKETRRGGFVAYCDELGTTMTKRLSVIRDVGEALREDRIDTHYQPIVRMDTGEIVGLEALFRVETDDGRVLAAGDFIEATSDVHTATQLTHRMVNIVARDVRAWLDQGICFQHVGINAASTDFQNDDLLKVIEAAFDREDVPLKHVFLEVTESVYMGQAGDGVARQIQSMRANGLRVALDDFGTGFASLTHLLSVPVDIIKIDKSFVARMEPESRAAAIVEGLLGIAAKLDIKVVAEGIETESQAAQLKVMGCTLGQGYLYSRPVDRQTVTKLLFAKAQKHDPDIRLIEAAADVTIADSAFTSENNKVIRYAVLRCGDDWRVVSERRQFGRFDTRSAAFQCALRLAREANASGLSVELLQSDDAGELRALRLSSDPDSAAPRKAVRQG

Samples

Sample ID Description Type Environment
1 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
2 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
3 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
4 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
5 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
6 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
7 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
8 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
9 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
10 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
11 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
12 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
13 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
14 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
15 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
16 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
17 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
18 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
19 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
20 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
21 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
22 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
23 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
24 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
25 2643221719 Rhizobium sp. Root274 Isolate Unclassified
26 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
27 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
28 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
29 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
30 2791355267 Rhizobium sp. L18 Isolate Nodule
31 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
32 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
33 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
34 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
35 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
36 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
37 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
38 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
39 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
40 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
41 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
42 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
43 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
44 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
45 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
46 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
47 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
48 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
49 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
50 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
51 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
52 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
53 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
54 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
55 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
56 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
57 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
58 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
59 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
60 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
61 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
62 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
63 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
64 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
65 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
66 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
67 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
68 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
69 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
70 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
71 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
72 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
73 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
74 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
75 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
76 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
77 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
78 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
79 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
80 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
81 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
82 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
83 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
84 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
85 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
86 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
87 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
88 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
89 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
90 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
91 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
92 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
93 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
94 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
95 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
96 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
97 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
98 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
99 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
101 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
102 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
104 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
105 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
106 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
113 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
114 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
115 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
116 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
117 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
118 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
119 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
120 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
121 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
122 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
123 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
124 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
125 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
126 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
127 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
128 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
129 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
130 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
131 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
134 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
135 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
136 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
137 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
138 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
139 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
140 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
141 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
142 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
143 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
144 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
145 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
146 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
147 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
148 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
149 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
150 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
151 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
152 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
153 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
158 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
159 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
160 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
161 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
162 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
163 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
164 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
165 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
166 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
167 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
168 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
169 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
170 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
171 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
172 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
173 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
174 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
175 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
176 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
177 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
178 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
179 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
180 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
181 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere
182 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 69.2
Metatranscriptomes 0
Isolates 30.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 29.11
Nodule 19.41
Rhizoplane 1.69
Rhizosphere 29.96
Stem 0
Stem Tuber 0
Unclassified 19.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10002260 3300001979 Bacteria 8788
2 JGI25155J39150_1000209 3300002704 Bacteria 23721
3 JGI25156J39149_1000490 3300002705 Bacteria 23721
4 JGI25162J39368_1003445 3300002737 Bacteria 4569
5 JGI25154J39366_1000399 3300002738 Bacteria 23721
6 JGI25158J39367_1000013 3300002739 Bacteria 48114
7 JGI25157J39369_1000019 3300002741 Bacteria 176591
8 JGI25152J39213_1000013 3300002773 Bacteria 123999
9 JGI25159J45721_1000085 3300002987 Bacteria 44498
10 JGI25159J45721_1004117 3300002987 Bacteria 4929
11 JGI25151J46595_10001023 3300003187 Bacteria 20977
12 JGI25151J46595_10002636 3300003187 Bacteria 10556
13 JGI25165J46597_1003333 3300003214 Bacteria 4089
14 JGI25153J46596_10000274 3300003215 Bacteria 40645
15 rootH1_10047583 3300003316 Bacteria 3115
16 rootL2_10003729 3300003322 Bacteria 14416
17 JGI25160J50197_1001347 3300003354 Bacteria 12395
18 JGI25160J50197_1001843 3300003354 Bacteria 10181
19 JGI25161J50226_1000127 3300003374 Bacteria 54223
20 JGI25161J50226_1000754 3300003374 Bacteria 12395
21 Ga0055526_1002340 3300003771 Bacteria 12879
22 Ga0055526_1006264 3300003771 Bacteria 6517
23 Ga0055526_1011305 3300003771 Bacteria 4040
24 Ga0055524_1000200 3300003775 Bacteria 65908
25 Ga0055524_1003567 3300003775 Bacteria 7504
26 Ga0055524_1016000 3300003775 Bacteria 2712
27 Ga0055528_1000033 3300003790 Bacteria 119662
28 Ga0055528_1000266 3300003790 Bacteria 44336
29 Ga0055528_1003401 3300003790 Bacteria 8010
30 Ga0055540_1003020 3300003792 Bacteria 8415
31 Ga0055543_1000042 3300004625 Bacteria 117438
32 Ga0055543_1001023 3300004625 Bacteria 12433
33 Ga0065165_1000908 3300005262 Bacteria 38179
34 Ga0065165_1003080 3300005262 Bacteria 12433
35 Ga0070670_100001757 3300005331 Bacteria 17645
36 Ga0068856_100050934 3300005614 Bacteria 4083
37 Ga0068859_100038299 3300005617 Bacteria 4811
38 Ga0068860_100005013 3300005843 Bacteria 13481
39 Ga0068862_100000625 3300005844 Bacteria 36732
40 Ga0075364_10000512 3300006051 Bacteria 19720
41 Ga0097620_100038299 3300006931 Bacteria 4811
42 Ga0105247_10010347 3300009101 Bacteria 5641
43 Ga0105249_10000161 3300009553 Bacteria 80491
44 Ga0157369_10062409 3300013105 Bacteria 4016
45 Ga0157369_10068495 3300013105 Bacteria 3813
46 Ga0157369_10158222 3300013105 Bacteria 2392
47 Ga0163161_10004356 3300017792 Bacteria 9865
48 Ga0163161_10009214 3300017792 Bacteria 6826
49 Ga0163161_10041614 3300017792 Bacteria 3302
50 Ga0209435_100025 3300025206 Bacteria 198776
51 Ga0209436_100036 3300025208 Bacteria 78433
52 Ga0209437_100283 3300025233 Bacteria 74859
53 Ga0207425_1002131 3300025245 Bacteria 7268
54 Ga0209646_1000083 3300025246 Bacteria 198777
55 Ga0209026_1000078 3300025250 Bacteria 198777
56 Ga0209759_1000060 3300025256 Bacteria 198777
57 Ga0209129_1000016 3300025258 Bacteria 485491
58 Ga0209129_1000092 3300025258 Bacteria 173874
59 Ga0209129_1000166 3300025258 Bacteria 97875
60 Ga0209233_1000268 3300025261 Bacteria 74859
61 Ga0209673_1000005 3300025273 Bacteria 692788
62 Ga0209673_1000157 3300025273 Bacteria 144747
63 Ga0209673_1005969 3300025273 Bacteria 5993
64 Ga0209673_1006957 3300025273 Bacteria 5339
65 Ga0209130_1000073 3300025284 Bacteria 174439
66 Ga0209130_1002939 3300025284 Bacteria 7783
67 Ga0209025_1000126 3300025294 Bacteria 200866
68 Ga0209025_1000336 3300025294 Bacteria 103514
69 Ga0209025_1029283 3300025294 Bacteria 2670
70 Ga0209564_1000237 3300025295 Bacteria 120540
71 Ga0209564_1008758 3300025295 Bacteria 4933
72 Ga0209758_1000201 3300025297 Bacteria 132855
73 Ga0209758_1003809 3300025297 Bacteria 13280
74 Ga0209256_1000185 3300025299 Bacteria 120265
75 Ga0209256_1005236 3300025299 Bacteria 7595
76 Ga0209256_1005443 3300025299 Bacteria 7330
77 Ga0207426_1000140 3300025302 Bacteria 195664
78 Ga0207426_1002309 3300025302 Bacteria 12536
79 Ga0209051_1001062 3300025303 Bacteria 25618
80 Ga0209257_1010802 3300025304 Bacteria 4531
81 Ga0207710_10011437 3300025900 Bacteria 3737
82 Ga0207702_10039123 3300026078 Bacteria 3973
83 Ga0268265_10000552 3300028380 Bacteria 38141
84 Ga0268264_10004747 3300028381 Bacteria 11541
85 Ga0307515_10001284 3300028794 Bacteria 56989
86 Ga0307513_10086200 3300031456 Bacteria 3221
87 Ga0439465_0000958 3300041413 Bacteria 9169
88 Ga0451837_1047475 3300041494 Bacteria 2225
89 Ga0451839_0125756 3300041496 Bacteria 2543
90 Ga0451841_0143924 3300041498 Bacteria 5127
91 Ga0451847_0023682 3300041503 Bacteria 2476
92 Ga0451843_0817982 3300041509 Bacteria 3435
93 Ga0466970_0002479 3300044765 Bacteria 8927
94 Ga0466957_0032938 3300044842 Bacteria 3106
95 Ga0466958_0027636 3300045836 Bacteria 3358
96 Ga0495617_007480 3300046452 Bacteria 3790
97 Ga0495627_000788 3300046453 Bacteria 23346
98 Ga0495627_004581 3300046453 Bacteria 5744
99 Ga0495627_008298 3300046453 Bacteria 3908
100 Ga0495650_0015711 3300046471 Bacteria 3870
101 Ga0495585_0026106 3300046492 Bacteria 3338
102 Ga0495596_0004141 3300046500 Bacteria 7129
103 Ga0495607_0019660 3300046501 Bacteria 4286
104 Ga0495606_0002936 3300046507 Bacteria 18825
105 Ga0495606_0010182 3300046507 Bacteria 7841
106 Ga0495606_0029061 3300046507 Bacteria 3888
107 Ga0495606_0034742 3300046507 Bacteria 3457
108 Ga0495610_0000052 3300046512 Bacteria 143261
109 Ga0495610_0000153 3300046512 Bacteria 76652
110 Ga0495610_0031744 3300046512 Bacteria 2752
111 Ga0495631_0023053 3300046518 Bacteria 2890
112 Ga0495632_0000610 3300046519 Bacteria 33067
113 Ga0495643_0012941 3300046522 Bacteria 5015
114 Ga0495643_0021844 3300046522 Bacteria 3663
115 Ga0495648_0007637 3300046524 Bacteria 8625
116 Ga0495648_0020218 3300046524 Bacteria 4653
117 Ga0495654_0033409 3300046530 Bacteria 2604
118 Ga0495609_0030293 3300046538 Bacteria 2463
119 Ga0495597_0008204 3300046542 Bacteria 5249
120 Ga0495633_0009847 3300046558 Bacteria 5254
121 Ga0495625_0008554 3300046660 Bacteria 8711
122 Ga0495625_0014753 3300046660 Bacteria 6220
123 Ga0495661_0016330 3300046665 Bacteria 4924
124 Ga0495649_0062997 3300046694 Bacteria 1993
125 Ga0495660_0011299 3300046810 Bacteria 5185
126 Ga0495636_0008860 3300047318 Bacteria 3962
127 Ga0495681_0000015 3300047470 Bacteria 183538
128 Ga0495681_0018113 3300047470 Bacteria 3888
129 Ga0495686_0000183 3300047472 Bacteria 119585
130 Ga0495686_0001500 3300047472 Bacteria 25251
131 Ga0495686_0007604 3300047472 Bacteria 8092
132 Ga0495686_0014380 3300047472 Bacteria 5448
133 Ga0495626_0000852 3300048091 Bacteria 27166
134 Ga0496116_0052958 3300048919 Bacteria 2684
135 Ga0496117_0054042 3300048920 Bacteria 2817
136 Ga0496118_0086027 3300048921 Bacteria 2186
137 Ga0496119_0007514 3300048922 Bacteria 9797
138 Ga0496121_0001095 3300048924 Bacteria 47819
139 Ga0496121_0004186 3300048924 Bacteria 19702
140 Ga0496121_0024290 3300048924 Bacteria 5803
141 Ga0496121_0041595 3300048924 Bacteria 4014
142 Ga0496122_0000924 3300048925 Bacteria 53653
143 Ga0496123_0001743 3300048926 Bacteria 28728
144 Ga0496124_0000236 3300048927 Bacteria 107751
145 Ga0496124_0014289 3300048927 Bacteria 7684
146 Ga0496124_0018196 3300048927 Bacteria 6590
147 Ga0496124_0025794 3300048927 Bacteria 5313
148 Ga0496125_0025203 3300048928 Bacteria 5452
149 Ga0496126_0029975 3300048929 Bacteria 5163
150 Ga0501280_002347 3300049776 Bacteria 3187
151 nmdc:mga00v17_35_c1 3300050491 Bacteria 85646
152 Ga0500643_001516 3300053087 Bacteria 13253
153 Ga0500643_010883 3300053087 Bacteria 3357
154 Ga0500641_0000604 3300053096 Bacteria 12954
155 Ga0500556_0001647 3300053104 Bacteria 8707
156 Ga0500562_001662 3300053108 Bacteria 5530
157 Ga0500658_0000697 3300053134 Bacteria 13867
158 Ga0500658_0021426 3300053134 Bacteria 2448
159 Ga0500616_0000533 3300053153 Bacteria 47588
160 Ga0500616_0004099 3300053153 Bacteria 10582
161 Ga0500616_0007123 3300053153 Bacteria 7162
162 Ga0500616_0020196 3300053153 Bacteria 3744
163 Ga0500622_0003869 3300053156 Bacteria 9720
164 Ga0500645_000262 3300053730 Bacteria 37926

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046694 Ga0495649_0062997 Ga0495649_0062997_472_1959 491
2 3300044842 Ga0466957_0032938 Ga0466957_0032938_347_1852 497
3 3300003322 rootL2_10003729 rootL2_1000372916 521
4 3300053153 Ga0500616_0007123 Ga0500616_0007123_3915_5759 571
5 3300006051 Ga0075364_10000512 Ga0075364_1000051218 583
6 3300050491 nmdc:mga00v17_35_c1 nmdc:mga00v17_35_c1_73268_75094 583
7 3300046453 Ga0495627_008298 Ga0495627_008298_1572_3389 584
8 3300046471 Ga0495650_0015711 Ga0495650_0015711_507_2324 584
9 3300046512 Ga0495610_0000052 Ga0495610_0000052_1381_3198 584
10 3300046519 Ga0495632_0000610 Ga0495632_0000610_1563_3380 584
11 3300047470 Ga0495681_0018113 Ga0495681_0018113_518_2335 584
12 iso_pu_bacteria 8003570095 8003572078 584
13 3300013105 Ga0157369_10062409 Ga0157369_100624093 586
14 3300048920 Ga0496117_0054042 Ga0496117_0054042_32_1849 588
15 3300053153 Ga0500616_0000533 Ga0500616_0000533_790_2742 588
16 3300041496 Ga0451839_0125756 Ga0451839_0125756_12_1793 589
17 3300046500 Ga0495596_0004141 Ga0495596_0004141_472_2271 589
18 3300046507 Ga0495606_0034742 Ga0495606_0034742_422_2221 589
19 3300048091 Ga0495626_0000852 Ga0495626_0000852_8557_10356 589
20 3300049776 Ga0501280_002347 Ga0501280_002347_1231_3012 591
21 3300046453 Ga0495627_004581 Ga0495627_004581_1882_3726 592
22 3300046524 Ga0495648_0007637 Ga0495648_0007637_4964_6808 592
23 3300048921 Ga0496118_0086027 Ga0496118_0086027_35_1882 593
24 iso_pu_bacteria 2643221689 2644501515 593
25 3300003316 rootH1_10047583 rootH1_100475833 594
26 3300003771 Ga0055526_1011305 Ga0055526_10113052 594
27 3300003790 Ga0055528_1000266 Ga0055528_100026639 594
28 3300025273 Ga0209673_1000005 Ga0209673_100000568 594
29 3300025294 Ga0209025_1029283 Ga0209025_10292831 594
30 3300048919 Ga0496116_0052958 Ga0496116_0052958_861_2663 594
31 3300048927 Ga0496124_0025794 Ga0496124_0025794_659_2485 594
32 iso_pu_bacteria 2600254933 2600377262 594
33 iso_pu_bacteria 2510917021 2511127136 595
34 iso_pu_bacteria 2600254933 2600377603 595
35 3300003187 JGI25151J46595_10001023 JGI25151J46595_100010236 596
36 3300003187 JGI25151J46595_10002636 JGI25151J46595_100026362 596
37 3300013105 Ga0157369_10158222 Ga0157369_101582222 596
38 3300025258 Ga0209129_1000016 Ga0209129_1000016323 596
39 3300025294 Ga0209025_1000126 Ga0209025_100012657 596
40 3300048924 Ga0496121_0001095 Ga0496121_0001095_37236_39041 596
41 iso_pu_bacteria 2510065019 2510136466 596
42 iso_pu_bacteria 2510461076 2510892343 596
43 iso_pu_bacteria 2513237084 2513568099 596
44 iso_pu_bacteria 2513237085 2513578345 596
45 iso_pu_bacteria 2513237093 2513631045 596
46 iso_pu_bacteria 2513237103 2513711045 596
47 iso_pu_bacteria 2513237162 2514021140 596
48 iso_pu_bacteria 2515075009 2515108575 596
49 iso_pu_bacteria 2515154113 2515632252 596
50 iso_pu_bacteria 2515154114 2515643492 596
51 iso_pu_bacteria 2515154116 2515658297 596
52 iso_pu_bacteria 2515154134 2515738075 596
53 iso_pu_bacteria 2516653077 2517041242 596
54 iso_pu_bacteria 2516653085 2517080131 596
55 iso_pu_bacteria 2517093000 2517098129 596
56 iso_pu_bacteria 2517287029 2517410077 596
57 iso_pu_bacteria 2585427526 2585525620 596
58 iso_pu_bacteria 2724679232 2725947876 596
59 iso_pu_bacteria 2765235942 2766065152 596
60 iso_pu_bacteria 2838686498 2838687514 596
61 iso_pu_bacteria 2838729681 2838734074 596
62 iso_pu_bacteria 2838742623 2838746526 596
63 iso_pu_bacteria 2841851746 2841854063 596
64 iso_pu_bacteria 2842110456 2842116690 596
65 iso_pu_bacteria 2842156927 2842159570 596
66 iso_pu_bacteria 2842163707 2842164019 596
67 iso_pu_bacteria 2842180545 2842182860 596
68 iso_pu_bacteria 2842217011 2842221548 596
69 iso_pu_bacteria 2842229732 2842232571 596
70 iso_pu_bacteria 2842243621 2842247185 596
71 iso_pu_bacteria 2842257432 2842259128 596
72 iso_pu_bacteria 2842271015 2842272453 596
73 iso_pu_bacteria 2842304105 2842309797 596
74 iso_pu_bacteria 2844454524 2844460509 596
75 iso_pu_bacteria 2857516855 2857518071 596
76 iso_pu_bacteria 2933570622 2933576239 596
77 iso_pu_bacteria 2933586486 2933592906 596
78 iso_pu_bacteria 2935901341 2935903121 596
79 iso_pu_bacteria 2936367885 2936374362 596
80 iso_pu_bacteria 2936375103 2936375129 596
81 iso_pu_bacteria 639633055 639645024 596
82 iso_pu_bacteria 8005307578 8005307890 596
83 iso_pu_bacteria 8005376324 8005379844 596
84 iso_pu_bacteria 8005460587 8005467252 596
85 iso_pu_bacteria 8005556819 8005562292 596
86 iso_pu_bacteria 8005563573 8005565474 596
87 iso_pu_bacteria 8018163183 8018165549 596
88 iso_pu_bacteria 8023680758 8023688051 596
89 iso_pu_bacteria 8024479707 8024484992 596
90 iso_pu_bacteria 8057874678 8057877972 596
91 3300005617 Ga0068859_100038299 Ga0068859_1000382993 597
92 3300005843 Ga0068860_100005013 Ga0068860_1000050134 597
93 3300005844 Ga0068862_100000625 Ga0068862_10000062519 597
94 3300006931 Ga0097620_100038299 Ga0097620_1000382993 597
95 3300009101 Ga0105247_10010347 Ga0105247_100103474 597
96 3300009553 Ga0105249_10000161 Ga0105249_1000016157 597
97 3300025900 Ga0207710_10011437 Ga0207710_100114373 597
98 3300028380 Ga0268265_10000552 Ga0268265_1000055234 597
99 3300028381 Ga0268264_10004747 Ga0268264_100047478 597
100 3300046522 Ga0495643_0021844 Ga0495643_0021844_1590_3503 597
101 iso_pu_bacteria 2510461069 2510840175 598
102 iso_pu_bacteria 2775507049 2776912487 598
103 iso_pu_bacteria 2919709256 2919713271 598
104 3300005331 Ga0070670_100001757 Ga0070670_1000017576 599
105 3300013105 Ga0157369_10068495 Ga0157369_100684953 599
106 3300046452 Ga0495617_007480 Ga0495617_007480_183_2042 599
107 3300046453 Ga0495627_000788 Ga0495627_000788_11207_13066 599
108 3300046512 Ga0495610_0000153 Ga0495610_0000153_43798_45657 599
109 3300046665 Ga0495661_0016330 Ga0495661_0016330_555_2414 599
110 3300047470 Ga0495681_0000015 Ga0495681_0000015_134470_136329 599
111 3300047472 Ga0495686_0014380 Ga0495686_0014380_3063_4922 599
112 3300048927 Ga0496124_0000236 Ga0496124_0000236_95199_97010 599
113 iso_pu_bacteria 2582581304 2585258472 599
114 3300003775 Ga0055524_1016000 Ga0055524_10160002 600
115 3300025273 Ga0209673_1005969 Ga0209673_10059694 600
116 3300025297 Ga0209758_1003809 Ga0209758_10038096 600
117 3300025299 Ga0209256_1005236 Ga0209256_10052365 600
118 3300041494 Ga0451837_1047475 Ga0451837_1047475_393_2207 600
119 3300041498 Ga0451841_0143924 Ga0451841_0143924_1429_3243 600
120 3300041503 Ga0451847_0023682 Ga0451847_0023682_122_1936 600
121 3300041509 Ga0451843_0817982 Ga0451843_0817982_654_2468 600
122 3300046492 Ga0495585_0026106 Ga0495585_0026106_1313_3127 600
123 3300046501 Ga0495607_0019660 Ga0495607_0019660_1915_3729 600
124 3300046507 Ga0495606_0002936 Ga0495606_0002936_3148_4962 600
125 3300046507 Ga0495606_0010182 Ga0495606_0010182_299_2113 600
126 3300046512 Ga0495610_0031744 Ga0495610_0031744_255_2069 600
127 3300046518 Ga0495631_0023053 Ga0495631_0023053_603_2417 600
128 3300046524 Ga0495648_0020218 Ga0495648_0020218_1990_3804 600
129 3300046530 Ga0495654_0033409 Ga0495654_0033409_612_2426 600
130 3300046538 Ga0495609_0030293 Ga0495609_0030293_111_1925 600
131 3300046542 Ga0495597_0008204 Ga0495597_0008204_1966_3780 600
132 3300046558 Ga0495633_0009847 Ga0495633_0009847_152_1966 600
133 3300046660 Ga0495625_0008554 Ga0495625_0008554_2182_4062 600
134 3300046660 Ga0495625_0014753 Ga0495625_0014753_2834_4648 600
135 3300046810 Ga0495660_0011299 Ga0495660_0011299_778_2592 600
136 3300047318 Ga0495636_0008860 Ga0495636_0008860_1711_3525 600
137 3300047472 Ga0495686_0007604 Ga0495686_0007604_677_2491 600
138 3300048924 Ga0496121_0004186 Ga0496121_0004186_16254_18068 600
139 3300053134 Ga0500658_0000697 Ga0500658_0000697_7461_9275 600
140 3300053134 Ga0500658_0021426 Ga0500658_0021426_471_2285 600
141 3300053153 Ga0500616_0020196 Ga0500616_0020196_255_2069 600
142 iso_pu_bacteria 2791355267 2793370778 600
143 iso_pu_bacteria 2919100787 2919104793 600
144 3300048924 Ga0496121_0024290 Ga0496121_0024290_2330_4147 601
145 3300048925 Ga0496122_0000924 Ga0496122_0000924_43885_45711 601
146 3300048926 Ga0496123_0001743 Ga0496123_0001743_26077_27903 601
147 iso_pu_bacteria 2643221653 2644297166 601
148 iso_pu_bacteria 2643221719 2644655419 601
149 iso_pu_bacteria 2989776772 2989777860 601
150 iso_pu_bacteria 8005246636 8005246900 601
151 3300017792 Ga0163161_10004356 Ga0163161_100043563 602
152 3300041413 Ga0439465_0000958 Ga0439465_0000958_2339_4168 602
153 iso_pu_bacteria 8005645114 8005648659 602
154 iso_pu_bacteria 8005682033 8005688295 602
155 3300002987 JGI25159J45721_1004117 JGI25159J45721_10041175 603
156 3300003354 JGI25160J50197_1001347 JGI25160J50197_100134713 603
157 3300003374 JGI25161J50226_1000754 JGI25161J50226_10007547 603
158 3300004625 Ga0055543_1001023 Ga0055543_10010237 603
159 3300005262 Ga0065165_1003080 Ga0065165_10030807 603
160 3300017792 Ga0163161_10041614 Ga0163161_100416143 603
161 3300025284 Ga0209130_1002939 Ga0209130_10029397 603
162 3300025302 Ga0207426_1002309 Ga0207426_10023097 603
163 iso_pu_bacteria 8005314921 8005320824 603
164 iso_pu_bacteria 8056875544 8056876853 603
165 3300002704 JGI25155J39150_1000209 JGI25155J39150_10002099 604
166 3300002705 JGI25156J39149_1000490 JGI25156J39149_10004909 604
167 3300002738 JGI25154J39366_1000399 JGI25154J39366_100039916 604
168 3300002739 JGI25158J39367_1000013 JGI25158J39367_100001355 604
169 3300002741 JGI25157J39369_1000019 JGI25157J39369_1000019163 604
170 3300002773 JGI25152J39213_1000013 JGI25152J39213_1000013106 604
171 3300002987 JGI25159J45721_1000085 JGI25159J45721_100008522 604
172 3300003215 JGI25153J46596_10000274 JGI25153J46596_1000027453 604
173 3300003354 JGI25160J50197_1001843 JGI25160J50197_10018439 604
174 3300003374 JGI25161J50226_1000127 JGI25161J50226_100012730 604
175 3300003771 Ga0055526_1002340 Ga0055526_100234015 604
176 3300003775 Ga0055524_1003567 Ga0055524_10035676 604
177 3300003790 Ga0055528_1003401 Ga0055528_10034016 604
178 3300003792 Ga0055540_1003020 Ga0055540_100302011 604
179 3300004625 Ga0055543_1000042 Ga0055543_100004251 604
180 3300005262 Ga0065165_1000908 Ga0065165_100090811 604
181 3300025206 Ga0209435_100025 Ga0209435_1000259 604
182 3300025208 Ga0209436_100036 Ga0209436_10003649 604
183 3300025245 Ga0207425_1002131 Ga0207425_10021312 604
184 3300025246 Ga0209646_1000083 Ga0209646_10000839 604
185 3300025250 Ga0209026_1000078 Ga0209026_10000789 604
186 3300025256 Ga0209759_1000060 Ga0209759_10000609 604
187 3300025258 Ga0209129_1000092 Ga0209129_1000092167 604
188 3300025273 Ga0209673_1006957 Ga0209673_10069572 604
189 3300025284 Ga0209130_1000073 Ga0209130_100007353 604
190 3300025295 Ga0209564_1008758 Ga0209564_10087583 604
191 3300025297 Ga0209758_1000201 Ga0209758_1000201118 604
192 3300025299 Ga0209256_1005443 Ga0209256_10054434 604
193 3300025302 Ga0207426_1000140 Ga0207426_1000140198 604
194 3300025303 Ga0209051_1001062 Ga0209051_100106229 604
195 3300025304 Ga0209257_1010802 Ga0209257_10108023 604
196 3300044765 Ga0466970_0002479 Ga0466970_0002479_1177_3003 604
197 3300045836 Ga0466958_0027636 Ga0466958_0027636_123_1949 604
198 3300046507 Ga0495606_0029061 Ga0495606_0029061_698_2524 604
199 3300046522 Ga0495643_0012941 Ga0495643_0012941_632_2458 604
200 3300048924 Ga0496121_0041595 Ga0496121_0041595_1114_2940 604
201 3300048927 Ga0496124_0018196 Ga0496124_0018196_2876_4702 604
202 3300048928 Ga0496125_0025203 Ga0496125_0025203_1796_3622 604
203 3300047472 Ga0495686_0000183 Ga0495686_0000183_11703_13568 605
204 3300047472 Ga0495686_0001500 Ga0495686_0001500_5857_7725 605
205 iso_pu_bacteria 2818991272 2819242855 605
206 3300017792 Ga0163161_10009214 Ga0163161_100092142 606
207 3300048927 Ga0496124_0014289 Ga0496124_0014289_1983_3830 606
208 3300025258 Ga0209129_1000166 Ga0209129_100016682 607
209 3300025294 Ga0209025_1000336 Ga0209025_100033686 607
210 3300028794 Ga0307515_10001284 Ga0307515_100012849 607
211 3300053087 Ga0500643_001516 Ga0500643_001516_160_2271 607
212 3300053096 Ga0500641_0000604 Ga0500641_0000604_149_2260 607
213 iso_pu_bacteria 2599185156 2599336444 607
214 3300031456 Ga0307513_10086200 Ga0307513_100862002 608
215 3300053153 Ga0500616_0004099 Ga0500616_0004099_8141_10279 608
216 3300053156 Ga0500622_0003869 Ga0500622_0003869_4141_6279 608
217 iso_pu_bacteria 2667528174 2671117274 608
218 iso_pu_bacteria 2919408235 2919413903 608
219 3300053087 Ga0500643_010883 Ga0500643_010883_392_2521 610
220 3300053104 Ga0500556_0001647 Ga0500556_0001647_4050_6167 610
221 3300053108 Ga0500562_001662 Ga0500562_001662_2414_4531 610
222 3300053730 Ga0500645_000262 Ga0500645_000262_12750_14879 610
223 3300048929 Ga0496126_0029975 Ga0496126_0029975_279_2114 611
224 3300001979 JGI24740J21852_10002260 JGI24740J21852_100022602 612
225 3300002737 JGI25162J39368_1003445 JGI25162J39368_10034455 612
226 3300003214 JGI25165J46597_1003333 JGI25165J46597_10033334 612
227 3300003771 Ga0055526_1006264 Ga0055526_10062648 612
228 3300003775 Ga0055524_1000200 Ga0055524_100020060 612
229 3300003790 Ga0055528_1000033 Ga0055528_100003393 612
230 3300005614 Ga0068856_100050934 Ga0068856_1000509342 612
231 3300025233 Ga0209437_100283 Ga0209437_10028376 612
232 3300025261 Ga0209233_1000268 Ga0209233_100026876 612
233 3300025273 Ga0209673_1000157 Ga0209673_100015791 612
234 3300025295 Ga0209564_1000237 Ga0209564_100023791 612
235 3300025299 Ga0209256_1000185 Ga0209256_100018591 612
236 3300026078 Ga0207702_10039123 Ga0207702_100391235 612
237 3300048922 Ga0496119_0007514 Ga0496119_0007514_1448_3286 612

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00563

EAL

EAL domain

351

588

0.94

PF00990

GGDEF

Diguanylate cyclase, GGDEF domain

180

332

0.93

PF13185

GAF_2

GAF domain

24

168

0.83

PF01590

GAF

GAF domain

23

167

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
2r6o-assembly1.cif.gz_B crystal structure of putative diguanylate cyclase/phosphodiesterase from thiobacillus denitrificans 0.9455 337 589
4rnj-assembly3.cif.gz_B pamora phosphodiesterase domain, apo form 0.9396 330 586
5m1t-assembly1.cif.gz_B pamucr phosphodiesterase, c-di-gmp complex 0.9384 350 582
3ign-assembly1.cif.gz_A crystal structure of the ggdef domain from marinobacter aquaeolei diguanylate cyclase complexed with c-di-gmp - northeast structural genomics consortium target mqr89a 0.9341 170 325
4rnj-assembly1.cif.gz_A pamora phosphodiesterase domain, apo form 0.934 333 586
ID Description Score Start End Superfamily
af_Q2G061_179_351_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.962 164 323 3.30.70.270
af_P9WM13_355_611_3.20.20.450 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;EAL domain 0.9468 337 590 3.20.20.450
2v0nA03 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9467 172 326 3.30.70.270
af_P77334_408_660_3.20.20.450 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;EAL domain 0.9432 338 589 3.20.20.450
5m1tB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;EAL domain 0.9384 350 582 3.20.20.450
ID Description Score Start End GO Terms
AF-A0A3N5NQN8-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9766 2 163 GO:0016301
AF-A0A1M4SW62-F1-model_v4 GAF domain-containing protein 0.9637 2 168
AF-A0A519HRV8-F1-model_v4 GAF domain-containing protein 0.963 2 172
AF-A0A7C3KJ22-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9611 3 172 GO:0016301
AF-A0A3M1SUU3-F1-model_v4 EAL domain-containing protein 0.96 399 588 GO:0071111

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pLDDT pTM Quality
87.76 0.52 Medium
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Predicted Structure (AlphaFold2)

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