F350386

General Info

Members Datasets Scaffolds Average Seq Length
237 179 474 320

Family's Representative Sequence

Representative Sequence 3300049583|Ga0501067_0151759|Ga0501067_0151759_102_1142
Length 346
Sequence MVKVCYLFLSVTGMTHIAWRLGEIMSRIVALLTALSLAIASECAHAQAPYPDKPVRLIVGFTPGSATDITARLFAQKFQDAWGVPVTVENVPGAGGSVGGDRVAKSAPDGTTFYWGANGALTINPTLQANPTYDVQRDLQPVARLLVMASILAVNNDVPAKSFAELMALAKAQPGKLSYASPGVGTPQHIAGELLKELARVDIVHVPYRGAVYTDVLSGRVTMTLQNMGTILPIVREGRLRGVAVTSLKRTPLMPDIPTIAESGFPNFEAISWFGLLAPAKTPAPIVARVYEQAVKVAAMPDVREKLAALGLDTSADAPEEFATIIKTDTAKWAKVIKDAGITAGN

Samples

Sample ID Description Type Environment
1 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
95 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
96 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
97 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
100 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
104 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
105 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
106 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
107 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
108 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
109 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
118 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
119 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
120 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
121 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
122 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
123 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
124 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
125 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
126 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
127 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
128 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
129 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
130 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
131 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
132 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
133 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
134 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
135 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
136 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
137 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
138 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
139 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
164 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
165 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
171 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
172 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
173 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
174 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
175 2841760612 Bosea sp. Tri-49 Isolate Nodule
176 2844104063 Bosea sp. Tri-39 Isolate Nodule
177 2851182111 Bosea sp. Tri-44 Isolate Nodule
178 2851246043 Bosea sp. Tri-54 Isolate Nodule
179 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.47
Metatranscriptomes 0
Isolates 2.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.02
Nodule 1.69
Rhizoplane 7.17
Rhizosphere 81.86
Stem 0
Stem Tuber 0
Unclassified 0.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501067_0151759 3300049583 Bacteria 1291
2 JGI25153J46596_10002487 3300003215 Bacteria 10580
3 Ga0070658_10035663 3300005327 Bacteria 4007
4 Ga0070690_100056105 3300005330 Bacteria 2525
5 Ga0070670_100243429 3300005331 Bacteria 1566
6 Ga0070682_100260495 3300005337 Bacteria 1255
7 Ga0068868_100054368 3300005338 Bacteria 3155
8 Ga0070660_100050289 3300005339 Bacteria 3207
9 Ga0070689_100004462 3300005340 Bacteria 9462
10 Ga0070661_100168069 3300005344 Bacteria 1664
11 Ga0070674_100017579 3300005356 Bacteria 4503
12 Ga0070674_100330993 3300005356 Bacteria 1224
13 Ga0070713_100008323 3300005436 Bacteria 7354
14 Ga0070708_100172730 3300005445 Bacteria 2018
15 Ga0070678_100046142 3300005456 Bacteria 3122
16 Ga0070681_10043939 3300005458 Bacteria 4472
17 Ga0070681_10433760 3300005458 Unclassified 1226
18 Ga0070706_100056766 3300005467 Bacteria 3612
19 Ga0070698_100005107 3300005471 Bacteria 14369
20 Ga0070698_100049254 3300005471 Bacteria 4301
21 Ga0070699_100018230 3300005518 Bacteria 6031
22 Ga0070679_100004895 3300005530 Bacteria 12348
23 Ga0070684_100130305 3300005535 Bacteria 2268
24 Ga0070697_100023697 3300005536 Bacteria 4883
25 Ga0070686_100198173 3300005544 Bacteria 1438
26 Ga0070693_100130040 3300005547 Bacteria 1573
27 Ga0070665_100020948 3300005548 Bacteria 6570
28 Ga0070665_100023719 3300005548 Bacteria 6180
29 Ga0070665_100045559 3300005548 Bacteria 4404
30 Ga0068855_100014476 3300005563 Bacteria 9499
31 Ga0068855_100449852 3300005563 Bacteria 1406
32 Ga0070664_100238310 3300005564 Bacteria 1632
33 Ga0068856_100231391 3300005614 Bacteria 1863
34 Ga0068856_100287833 3300005614 Bacteria 1660
35 Ga0068859_100256858 3300005617 Bacteria 1838
36 Ga0068859_100285244 3300005617 Bacteria 1744
37 Ga0068864_100047406 3300005618 Bacteria 3691
38 Ga0068861_100197888 3300005719 Bacteria 1685
39 Ga0068870_10031164 3300005840 Bacteria 2700
40 Ga0068860_100060392 3300005843 Bacteria 3603
41 Ga0068860_100182086 3300005843 Bacteria 2031
42 Ga0081455_10000537 3300005937 Bacteria 49240
43 Ga0081455_10004937 3300005937 Bacteria 14743
44 Ga0081455_10013038 3300005937 Bacteria 8240
45 Ga0081455_10026741 3300005937 Bacteria 5298
46 Ga0081538_10005836 3300005981 Bacteria 10970
47 Ga0081540_1015977 3300005983 Bacteria 4727
48 Ga0081540_1035607 3300005983 Bacteria 2667
49 Ga0081539_10001282 3300005985 Bacteria 44233
50 Ga0081539_10012567 3300005985 Bacteria 6504
51 Ga0070717_10104668 3300006028 Bacteria 2407
52 Ga0075362_10012143 3300006177 Bacteria 3413
53 Ga0075367_10031984 3300006178 Bacteria 3024
54 Ga0075367_10180170 3300006178 Bacteria 1317
55 Ga0075367_10243952 3300006178 Bacteria 1126
56 Ga0075369_10011249 3300006186 Bacteria 3518
57 Ga0075427_10005799 3300006194 Bacteria 1770
58 Ga0075366_10078471 3300006195 Bacteria 1971
59 Ga0075428_100088028 3300006844 Bacteria 3387
60 Ga0075430_100107726 3300006846 Bacteria 2324
61 Ga0075433_10092147 3300006852 Bacteria 2680
62 Ga0075434_100105940 3300006871 Bacteria 2821
63 Ga0075434_100403756 3300006871 Bacteria 1387
64 Ga0075434_100453915 3300006871 Bacteria 1303
65 Ga0075429_100027743 3300006880 Bacteria 4914
66 Ga0075436_100119880 3300006914 Bacteria 1840
67 Ga0097620_100256819 3300006931 Bacteria 1838
68 Ga0097620_100285249 3300006931 Bacteria 1744
69 Ga0075435_100149605 3300007076 Bacteria 1962
70 Ga0075435_100216237 3300007076 Unclassified 1627
71 Ga0099794_10106235 3300007265 Bacteria 1404
72 Ga0105240_10001546 3300009093 Bacteria 39059
73 Ga0105240_10293468 3300009093 Bacteria 1863
74 Ga0111539_10090509 3300009094 Bacteria 3596
75 Ga0114129_10035550 3300009147 Bacteria 7038
76 Ga0114129_10084534 3300009147 Bacteria 4405
77 Ga0105241_10175320 3300009174 Bacteria 1774
78 Ga0105248_10008954 3300009177 Bacteria 11008
79 Ga0105248_10714692 3300009177 Bacteria 1131
80 Ga0105238_10351439 3300009551 Bacteria 1463
81 Ga0105238_10402412 3300009551 Bacteria 1362
82 Ga0105239_10137567 3300010375 Bacteria 2719
83 Ga0105246_10138507 3300011119 Bacteria 1827
84 Ga0157373_10123243 3300013100 Bacteria 1822
85 Ga0163162_10239872 3300013306 Bacteria 1944
86 Ga0157380_10133237 3300014326 Bacteria 2123
87 Ga0209758_1000088 3300025297 Bacteria 251547
88 Ga0207426_1012474 3300025302 Bacteria 3190
89 Ga0207645_10115712 3300025907 Bacteria 1738
90 Ga0207705_10030211 3300025909 Bacteria 3866
91 Ga0207684_10086565 3300025910 Bacteria 2669
92 Ga0207707_10064500 3300025912 Bacteria 3189
93 Ga0207695_10036448 3300025913 Bacteria 5317
94 Ga0207657_10115354 3300025919 Bacteria 2214
95 Ga0207657_10288241 3300025919 Bacteria 1302
96 Ga0207649_10259832 3300025920 Bacteria 1254
97 Ga0207652_10043172 3300025921 Bacteria 3839
98 Ga0207694_10011202 3300025924 Bacteria 6770
99 Ga0207687_10258973 3300025927 Bacteria 1386
100 Ga0207700_10030727 3300025928 Bacteria 3808
101 Ga0207690_10143390 3300025932 Bacteria 1763
102 Ga0207709_10212697 3300025935 Bacteria 1389
103 Ga0207670_10001596 3300025936 Bacteria 11822
104 Ga0207670_10024817 3300025936 Bacteria 3753
105 Ga0207669_10024611 3300025937 Bacteria 3239
106 Ga0207669_10146374 3300025937 Bacteria 1648
107 Ga0207691_10266019 3300025940 Bacteria 1477
108 Ga0207711_10059508 3300025941 Bacteria 3289
109 Ga0207689_10288573 3300025942 Bacteria 1359
110 Ga0207667_10145902 3300025949 Bacteria 2436
111 Ga0207667_10415103 3300025949 Bacteria 1370
112 Ga0207658_10322006 3300025986 Bacteria 1339
113 Ga0207677_10153194 3300026023 Bacteria 1781
114 Ga0207702_10232866 3300026078 Bacteria 1722
115 Ga0207676_10211026 3300026095 Bacteria 1722
116 Ga0207674_10150787 3300026116 Bacteria 2282
117 Ga0207675_100089998 3300026118 Bacteria 2885
118 Ga0207683_10024009 3300026121 Bacteria 5247
119 Ga0207683_10041591 3300026121 Bacteria 4013
120 Ga0209967_1006224 3300027364 Bacteria 1615
121 Ga0268266_10015701 3300028379 Bacteria 6487
122 Ga0268266_10016180 3300028379 Bacteria 6378
123 Ga0268266_10121905 3300028379 Bacteria 2321
124 Ga0268265_10392150 3300028380 Bacteria 1281
125 Ga0265340_10002634 3300031247 Bacteria 10203
126 Ga0265340_10058631 3300031247 Bacteria 1848
127 Ga0265339_10012540 3300031249 Bacteria 5173
128 Ga0265331_10099630 3300031250 Bacteria 1338
129 Ga0265316_10334470 3300031344 Bacteria 1098
130 Ga0307408_100251361 3300031548 Bacteria 1458
131 Ga0265314_10074987 3300031711 Bacteria 2252
132 Ga0265342_10000148 3300031712 Bacteria 79748
133 Ga0307416_100249972 3300032002 Bacteria 1725
134 Ga0307411_10366513 3300032005 Bacteria 1180
135 Ga0373959_0008354 3300034820 Bacteria 1761
136 Ga0373936_0059323 3300035113 Bacteria 1559
137 Ga0373946_0012586 3300035171 Bacteria 3169
138 Ga0373931_0059829 3300035691 Bacteria 2049
139 Ga0373931_0105897 3300035691 Bacteria 1589
140 Ga0373935_0159077 3300035692 Bacteria 1538
141 Ga0373927_0059277 3300035695 Bacteria 2476
142 Ga0373947_0008597 3300035725 Bacteria 5877
143 Ga0373937_0264376 3300036401 Bacteria 1623
144 Ga0373925_0102116 3300037068 Bacteria 2206
145 Ga0373925_0434851 3300037068 Bacteria 1073
146 Ga0395899_0010647 3300037312 Bacteria 7047
147 Ga0395900_0010448 3300037418 Bacteria 9495
148 Ga0395900_0169881 3300037418 Bacteria 2220
149 Ga0395898_0028788 3300037466 Bacteria 5568
150 Ga0395898_0250475 3300037466 Bacteria 1689
151 Ga0395901_0021646 3300038443 Bacteria 6586
152 Ga0436365_1714738 3300039437 Bacteria 14435
153 Ga0439456_025734 3300042013 Bacteria 1250
154 Ga0450923_017416 3300042125 Bacteria 1364
155 Ga0451577_0104546 3300042876 Bacteria 2531
156 Ga0466963_0008595 3300044694 Bacteria 6129
157 Ga0466971_0090457 3300044719 Bacteria 1401
158 Ga0466967_0038973 3300045976 Bacteria 4080
159 Ga0495603_0008159 3300046455 Bacteria 6328
160 Ga0495638_0126185 3300046460 Bacteria 1508
161 Ga0495580_0080440 3300046472 Bacteria 2272
162 Ga0495582_0045528 3300046473 Bacteria 2416
163 Ga0495584_0053234 3300046491 Bacteria 2037
164 Ga0495584_0086842 3300046491 Bacteria 1576
165 Ga0495584_0164656 3300046491 Bacteria 1127
166 Ga0495585_0079901 3300046492 Bacteria 1773
167 Ga0495594_0020965 3300046499 Bacteria 3486
168 Ga0495596_0106846 3300046500 Bacteria 1087
169 Ga0495637_0116083 3300046520 Bacteria 1034
170 Ga0495598_0046853 3300046537 Bacteria 1286
171 Ga0495598_0048202 3300046537 Bacteria 1273
172 Ga0495621_0114522 3300046539 Bacteria 1037
173 Ga0495633_0089068 3300046558 Bacteria 1435
174 Ga0495611_0133843 3300046648 Bacteria 1157
175 Ga0495659_0092089 3300046664 Bacteria 1165
176 Ga0495613_0084566 3300046689 Bacteria 2303
177 Ga0495649_0052397 3300046694 Bacteria 2211
178 Ga0495676_0077048 3300047321 Bacteria 2543
179 Ga0496101_0062614 3300048904 Bacteria 2705
180 Ga0496103_0043422 3300048906 Bacteria 2768
181 Ga0496104_0009381 3300048907 Bacteria 8704
182 Ga0496105_0008545 3300048908 Bacteria 7956
183 Ga0496106_0026619 3300048909 Bacteria 4307
184 Ga0496107_0107469 3300048910 Bacteria 2049
185 Ga0496109_0174507 3300048912 Bacteria 2017
186 Ga0496111_0171654 3300048914 Bacteria 1611
187 Ga0496112_0482428 3300048915 Bacteria 1176
188 Ga0496114_0067707 3300048917 Bacteria 2995
189 Ga0496114_0096872 3300048917 Bacteria 2512
190 Ga0496114_0363303 3300048917 Bacteria 1281
191 Ga0496115_0014813 3300048918 Bacteria 5913
192 Ga0496115_0020729 3300048918 Bacteria 5072
193 Ga0496115_0034028 3300048918 Bacteria 4027
194 Ga0496115_0057516 3300048918 Bacteria 3128
195 Ga0496115_0295703 3300048918 Bacteria 1327
196 Ga0496125_0004247 3300048928 Bacteria 16695
197 Ga0501033_0125788 3300049570 Bacteria 1859
198 Ga0501034_0001849 3300049571 Bacteria 26856
199 Ga0501034_0007958 3300049571 Bacteria 11259
200 Ga0501034_0207401 3300049571 Bacteria 1916
201 Ga0501034_0453863 3300049571 Bacteria 1199
202 Ga0501043_0179785 3300049579 Bacteria 1648
203 Ga0501047_0253464 3300049581 Bacteria 1608
204 Ga0501047_0457300 3300049581 Bacteria 1105
205 Ga0501068_0002076 3300049584 Bacteria 10680
206 Ga0501080_0257278 3300049742 Bacteria 1591
207 Ga0501083_0290214 3300049744 Bacteria 1064
208 Ga0501044_0082148 3300049823 Bacteria 3261
209 Ga0501044_0216569 3300049823 Bacteria 1867
210 Ga0501044_0348515 3300049823 Bacteria 1401
211 nmdc:mga03683_3039_c1 3300050489 Bacteria 5319
212 nmdc:mga0yw44_59776_c1 3300050492 Bacteria 2333
213 nmdc:mga0k408_59583_c1 3300050493 Bacteria 2218
214 nmdc:mga0k408_9661_c1 3300050493 Bacteria 5207
215 nmdc:mga06z11_81162_c1 3300050494 Bacteria 1740
216 nmdc:mga06z11_8974_c2 3300050494 Bacteria 2546
217 nmdc:mga09592_35071_c1 3300050508 Bacteria 4197
218 nmdc:mga09592_492975_c1 3300050508 Bacteria 1055
219 nmdc:mga0qj67_25990_c1 3300050509 Plasmid 4530
220 nmdc:mga06r32_84564_c1 3300050510 Bacteria 3093
221 nmdc:mga08y16_196033_c1 3300050511 Bacteria 2093
222 nmdc:mga08y16_68308_c1 3300050511 Bacteria 3705
223 nmdc:mga08y16_76834_c1 3300050511 Bacteria 3481
224 nmdc:mga0rr50_130723_c1 3300050513 Bacteria 2010
225 nmdc:mga0rr50_507920_c1 3300050513 Bacteria 1025
226 nmdc:mga0a205_161659_c1 3300050515 Bacteria 2136
227 nmdc:mga0a205_489508_c1 3300050515 Bacteria 1087
228 nmdc:mga0sz30_402_c1 3300050516 Bacteria 16495
229 Ga0500641_0004939 3300053096 Bacteria 4726
230 Ga0500642_0121245 3300053130 Bacteria 1223
231 Ga0500552_002736 3300053733 Bacteria 1738
232 2834642166 2834641062 Bacteria 5559922
233 2841762901 2841760612 Bacteria 6454112
234 2844109229 2844104063 Bacteria 6440972
235 2851182188 2851182111 Bacteria 6047226
236 2851251336 2851246043 Bacteria 6439203
237 8003401213 8003400568 Bacteria 5535898
238 Ga0501067_0151759
239 JGI25153J46596_10002487
240 Ga0070658_10035663
241 Ga0070690_100056105
242 Ga0070670_100243429
243 Ga0070682_100260495
244 Ga0068868_100054368
245 Ga0070660_100050289
246 Ga0070689_100004462
247 Ga0070661_100168069
248 Ga0070674_100017579
249 Ga0070674_100330993
250 Ga0070713_100008323
251 Ga0070708_100172730
252 Ga0070678_100046142
253 Ga0070681_10043939
254 Ga0070681_10433760
255 Ga0070706_100056766
256 Ga0070698_100005107
257 Ga0070698_100049254
258 Ga0070699_100018230
259 Ga0070679_100004895
260 Ga0070684_100130305
261 Ga0070697_100023697
262 Ga0070686_100198173
263 Ga0070693_100130040
264 Ga0070665_100020948
265 Ga0070665_100023719
266 Ga0070665_100045559
267 Ga0068855_100014476
268 Ga0068855_100449852
269 Ga0070664_100238310
270 Ga0068856_100231391
271 Ga0068856_100287833
272 Ga0068859_100256858
273 Ga0068859_100285244
274 Ga0068864_100047406
275 Ga0068861_100197888
276 Ga0068870_10031164
277 Ga0068860_100060392
278 Ga0068860_100182086
279 Ga0081455_10000537
280 Ga0081455_10004937
281 Ga0081455_10013038
282 Ga0081455_10026741
283 Ga0081538_10005836
284 Ga0081540_1015977
285 Ga0081540_1035607
286 Ga0081539_10001282
287 Ga0081539_10012567
288 Ga0070717_10104668
289 Ga0075362_10012143
290 Ga0075367_10031984
291 Ga0075367_10180170
292 Ga0075367_10243952
293 Ga0075369_10011249
294 Ga0075427_10005799
295 Ga0075366_10078471
296 Ga0075428_100088028
297 Ga0075430_100107726
298 Ga0075433_10092147
299 Ga0075434_100105940
300 Ga0075434_100403756
301 Ga0075434_100453915
302 Ga0075429_100027743
303 Ga0075436_100119880
304 Ga0097620_100256819
305 Ga0097620_100285249
306 Ga0075435_100149605
307 Ga0075435_100216237
308 Ga0099794_10106235
309 Ga0105240_10001546
310 Ga0105240_10293468
311 Ga0111539_10090509
312 Ga0114129_10035550
313 Ga0114129_10084534
314 Ga0105241_10175320
315 Ga0105248_10008954
316 Ga0105248_10714692
317 Ga0105238_10351439
318 Ga0105238_10402412
319 Ga0105239_10137567
320 Ga0105246_10138507
321 Ga0157373_10123243
322 Ga0163162_10239872
323 Ga0157380_10133237
324 Ga0209758_1000088
325 Ga0207426_1012474
326 Ga0207645_10115712
327 Ga0207705_10030211
328 Ga0207684_10086565
329 Ga0207707_10064500
330 Ga0207695_10036448
331 Ga0207657_10115354
332 Ga0207657_10288241
333 Ga0207649_10259832
334 Ga0207652_10043172
335 Ga0207694_10011202
336 Ga0207687_10258973
337 Ga0207700_10030727
338 Ga0207690_10143390
339 Ga0207709_10212697
340 Ga0207670_10001596
341 Ga0207670_10024817
342 Ga0207669_10024611
343 Ga0207669_10146374
344 Ga0207691_10266019
345 Ga0207711_10059508
346 Ga0207689_10288573
347 Ga0207667_10145902
348 Ga0207667_10415103
349 Ga0207658_10322006
350 Ga0207677_10153194
351 Ga0207702_10232866
352 Ga0207676_10211026
353 Ga0207674_10150787
354 Ga0207675_100089998
355 Ga0207683_10024009
356 Ga0207683_10041591
357 Ga0209967_1006224
358 Ga0268266_10015701
359 Ga0268266_10016180
360 Ga0268266_10121905
361 Ga0268265_10392150
362 Ga0265340_10002634
363 Ga0265340_10058631
364 Ga0265339_10012540
365 Ga0265331_10099630
366 Ga0265316_10334470
367 Ga0307408_100251361
368 Ga0265314_10074987
369 Ga0265342_10000148
370 Ga0307416_100249972
371 Ga0307411_10366513
372 Ga0373959_0008354
373 Ga0373936_0059323
374 Ga0373946_0012586
375 Ga0373931_0059829
376 Ga0373931_0105897
377 Ga0373935_0159077
378 Ga0373927_0059277
379 Ga0373947_0008597
380 Ga0373937_0264376
381 Ga0373925_0102116
382 Ga0373925_0434851
383 Ga0395899_0010647
384 Ga0395900_0010448
385 Ga0395900_0169881
386 Ga0395898_0028788
387 Ga0395898_0250475
388 Ga0395901_0021646
389 Ga0436365_1714738
390 Ga0439456_025734
391 Ga0450923_017416
392 Ga0451577_0104546
393 Ga0466963_0008595
394 Ga0466971_0090457
395 Ga0466967_0038973
396 Ga0495603_0008159
397 Ga0495638_0126185
398 Ga0495580_0080440
399 Ga0495582_0045528
400 Ga0495584_0053234
401 Ga0495584_0086842
402 Ga0495584_0164656
403 Ga0495585_0079901
404 Ga0495594_0020965
405 Ga0495596_0106846
406 Ga0495637_0116083
407 Ga0495598_0046853
408 Ga0495598_0048202
409 Ga0495621_0114522
410 Ga0495633_0089068
411 Ga0495611_0133843
412 Ga0495659_0092089
413 Ga0495613_0084566
414 Ga0495649_0052397
415 Ga0495676_0077048
416 Ga0496101_0062614
417 Ga0496103_0043422
418 Ga0496104_0009381
419 Ga0496105_0008545
420 Ga0496106_0026619
421 Ga0496107_0107469
422 Ga0496109_0174507
423 Ga0496111_0171654
424 Ga0496112_0482428
425 Ga0496114_0067707
426 Ga0496114_0096872
427 Ga0496114_0363303
428 Ga0496115_0014813
429 Ga0496115_0020729
430 Ga0496115_0034028
431 Ga0496115_0057516
432 Ga0496115_0295703
433 Ga0496125_0004247
434 Ga0501033_0125788
435 Ga0501034_0001849
436 Ga0501034_0007958
437 Ga0501034_0207401
438 Ga0501034_0453863
439 Ga0501043_0179785
440 Ga0501047_0253464
441 Ga0501047_0457300
442 Ga0501068_0002076
443 Ga0501080_0257278
444 Ga0501083_0290214
445 Ga0501044_0082148
446 Ga0501044_0216569
447 Ga0501044_0348515
448 nmdc:mga03683_3039_c1
449 nmdc:mga0yw44_59776_c1
450 nmdc:mga0k408_59583_c1
451 nmdc:mga0k408_9661_c1
452 nmdc:mga06z11_81162_c1
453 nmdc:mga06z11_8974_c2
454 nmdc:mga09592_35071_c1
455 nmdc:mga09592_492975_c1
456 nmdc:mga0qj67_25990_c1
457 nmdc:mga06r32_84564_c1
458 nmdc:mga08y16_196033_c1
459 nmdc:mga08y16_68308_c1
460 nmdc:mga08y16_76834_c1
461 nmdc:mga0rr50_130723_c1
462 nmdc:mga0rr50_507920_c1
463 nmdc:mga0a205_161659_c1
464 nmdc:mga0a205_489508_c1
465 nmdc:mga0sz30_402_c1
466 Ga0500641_0004939
467 Ga0500642_0121245
468 Ga0500552_002736
469 2834642166
470 2841762901
471 2844109229
472 2851182188
473 2851251336
474 8003401213

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

70

342

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hk9-assembly2.cif.gz_A apo-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis 0.964 27 317
8hk9-assembly2.cif.gz_A apo-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis 0.9608 27 317
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9566 25 320
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9535 25 320
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.9513 24 320
ID Description Score Start End Superfamily
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9435 24 320 3.40.190.150
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9341 124 244 3.40.190.10
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9329 24 320 3.40.190.150
2qpqC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9323 124 244 3.40.190.10
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9282 24 320 3.40.190.150
ID Description Score Start End GO Terms
AF-A0A2N4SUF0-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9782 32 320
AF-A0A375FQQ0-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9756 62 320
AF-A0A7X1P606-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9756 112 320
AF-A0A853GVT4-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.975 32 320
AF-A0A2W5SFE0-F1-model_v4 ABC transporter substrate-binding protein 0.9746 20 320

Map