F350136

General Info

Members Datasets Scaffolds Average Seq Length
237 151 474 570

Family's Representative Sequence

Representative Sequence 3300031730|Ga0307516_10049075|Ga0307516_100490753
Length 557
Sequence MSQNPRPAQAGRFLSSSVGPGDVFTREDLTADQKLFGQTAAEFMRREVVPNAPRLYNHDWQFTRELLRKAGELDLLRLEIPEVYGGLGLDKASAAYVFEQIGMNPSFGGSIGAHTGIGTMPLLYFGTAAQKAKYLPRLANGELLGCYCLTETGSGSDALAAKTTAVLTPDGKHYVLNGRKMWITNGVFADLFTVFAKVDGSKFTGFLVERSMGVVSGANEHKLGLDGSATCEVILDDVKVPVDNVLGAIGEGHKVAFNTLNLGRVKLGSRNMSAAKAALANAARYARERKQFGKPIGEFGMIKHKLAEMSIRIYVCDSMVYRTLGDVDPADGAQVLATIEQFAVECSINKVASSEILAYVVDEALQVYGGNGYSREFPAERPYRDARITRIYEGTNEINRMIIPTRILKQGIPAEPAAGGSGERAVLAAAKRLTIAMLAGVTEAYGERVRDQQQILAHIADAIIDGYAIESVLARTEKLAARDPAAAALAADMTSVFLGDAADRIVHSAKQVANALGDHGAATRDRIAPLAAYPGVDSVAARRRIADAVLAGGGHPY

Samples

Sample ID Description Type Environment
1 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
93 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
98 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
103 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
104 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
105 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
111 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
117 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
118 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
136 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
137 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
138 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
139 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
140 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
141 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
142 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
143 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
144 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
145 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
146 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
147 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
148 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
151 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.64
Nodule 0
Rhizoplane 4.22
Rhizosphere 88.19
Stem 0
Stem Tuber 0
Unclassified 2.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307516_10049075 3300031730 Bacteria 4151
2 Ga0065712_10008387 3300005290 Bacteria 4260
3 Ga0065715_10007341 3300005293 Bacteria 4272
4 Ga0065715_10016385 3300005293 Bacteria 3147
5 Ga0065715_10095415 3300005293 Bacteria 4089
6 Ga0065707_10001541 3300005295 Bacteria 8030
7 Ga0065707_10096484 3300005295 Bacteria 3264
8 Ga0070690_100004751 3300005330 Bacteria 7581
9 Ga0070670_100050405 3300005331 Bacteria 3577
10 Ga0070680_100082833 3300005336 Bacteria 2649
11 Ga0070682_100093229 3300005337 Bacteria 1974
12 Ga0070691_10010630 3300005341 Bacteria 4202
13 Ga0070668_100136579 3300005347 Bacteria 1973
14 Ga0070669_100093464 3300005353 Unclassified 2258
15 Ga0070675_100048447 3300005354 Bacteria 3484
16 Ga0070671_100035684 3300005355 Bacteria 4119
17 Ga0070673_100031599 3300005364 Bacteria 3976
18 Ga0070688_100013994 3300005365 Bacteria 4538
19 Ga0070667_100116318 3300005367 Bacteria 2322
20 Ga0070701_10002977 3300005438 Bacteria 6622
21 Ga0070705_100087680 3300005440 Bacteria 1930
22 Ga0070700_100057059 3300005441 Bacteria 2449
23 Ga0070694_100001660 3300005444 Bacteria 13091
24 Ga0070708_100037856 3300005445 Bacteria 4211
25 Ga0070662_100018673 3300005457 Bacteria 4695
26 Ga0068867_100003762 3300005459 Bacteria 10680
27 Ga0070699_100000525 3300005518 Bacteria 36238
28 Ga0070699_100070916 3300005518 Bacteria 3030
29 Ga0070684_100004472 3300005535 Bacteria 10644
30 Ga0070697_100033196 3300005536 Bacteria 4157
31 Ga0068853_100065201 3300005539 Bacteria 3160
32 Ga0070672_100035377 3300005543 Bacteria 3797
33 Ga0070686_100019975 3300005544 Unclassified 3958
34 Ga0070693_100002801 3300005547 Bacteria 8021
35 Ga0070665_100002246 3300005548 Bacteria 21490
36 Ga0070664_100000222 3300005564 Bacteria 40764
37 Ga0068852_100110701 3300005616 Bacteria 2496
38 Ga0068859_100043406 3300005617 Bacteria 4518
39 Ga0068859_100107450 3300005617 Bacteria 2851
40 Ga0068863_100006804 3300005841 Bacteria 11206
41 Ga0068858_100076395 3300005842 Bacteria 3110
42 Ga0068860_100058348 3300005843 Bacteria 3669
43 Ga0068860_100063012 3300005843 Bacteria 3522
44 Ga0068860_100141948 3300005843 Unclassified 2309
45 Ga0068862_100014697 3300005844 Bacteria 6503
46 Ga0068862_100038051 3300005844 Bacteria 4079
47 Ga0081455_10009645 3300005937 Bacteria 9908
48 Ga0068871_100003400 3300006358 Bacteria 10935
49 Ga0075428_100002558 3300006844 Bacteria 19750
50 Ga0075428_100010865 3300006844 Bacteria 10121
51 Ga0075430_100003971 3300006846 Bacteria 12470
52 Ga0075431_100002364 3300006847 Bacteria 18119
53 Ga0075431_100007090 3300006847 Bacteria 11134
54 Ga0075431_100013080 3300006847 Bacteria 8382
55 Ga0075433_10007488 3300006852 Bacteria 8667
56 Ga0075433_10013432 3300006852 Bacteria 6658
57 Ga0075433_10045123 3300006852 Bacteria 3831
58 Ga0075433_10081029 3300006852 Bacteria 2861
59 Ga0075434_100097069 3300006871 Bacteria 2952
60 Ga0075434_100108927 3300006871 Bacteria 2780
61 Ga0075429_100011259 3300006880 Bacteria 7741
62 Ga0075429_100016636 3300006880 Bacteria 6370
63 Ga0075429_100163931 3300006880 Bacteria 1947
64 Ga0075436_100007472 3300006914 Bacteria 7474
65 Ga0075436_100019107 3300006914 Bacteria 4695
66 Ga0075436_100039075 3300006914 Bacteria 3274
67 Ga0097620_100043404 3300006931 Bacteria 4518
68 Ga0097620_100107450 3300006931 Bacteria 2851
69 Ga0075435_100000383 3300007076 Bacteria 27116
70 Ga0075435_100000973 3300007076 Bacteria 18103
71 Ga0075435_100041890 3300007076 Bacteria 3661
72 Ga0075435_100057771 3300007076 Bacteria 3139
73 Ga0075435_100059205 3300007076 Bacteria 3105
74 Ga0099794_10027824 3300007265 Bacteria 2624
75 Ga0111539_10001215 3300009094 Bacteria 34303
76 Ga0111539_10005752 3300009094 Bacteria 16034
77 Ga0111539_10017186 3300009094 Bacteria 8954
78 Ga0111539_10019185 3300009094 Bacteria 8449
79 Ga0105245_10148783 3300009098 Bacteria 2212
80 Ga0114129_10000532 3300009147 Bacteria 46632
81 Ga0114129_10000778 3300009147 Bacteria 40766
82 Ga0114129_10002480 3300009147 Bacteria 25632
83 Ga0114129_10011175 3300009147 Bacteria 12799
84 Ga0114129_10013238 3300009147 Bacteria 11749
85 Ga0114129_10021497 3300009147 Bacteria 9158
86 Ga0114129_10022081 3300009147 Bacteria 9031
87 Ga0114129_10041370 3300009147 Bacteria 6494
88 Ga0114129_10266771 3300009147 Bacteria 2292
89 Ga0114129_10292608 3300009147 Bacteria 2173
90 Ga0105243_10001313 3300009148 Bacteria 22196
91 Ga0105243_10019178 3300009148 Bacteria 5186
92 Ga0105243_10041184 3300009148 Bacteria 3613
93 Ga0105242_10000997 3300009176 Bacteria 22197
94 Ga0105248_10002465 3300009177 Bacteria 20556
95 Ga0105238_10003913 3300009551 Bacteria 14791
96 Ga0105238_10103878 3300009551 Bacteria 2823
97 Ga0105249_10004089 3300009553 Bacteria 12596
98 Ga0105249_10019530 3300009553 Bacteria 6047
99 Ga0105239_10092926 3300010375 Bacteria 3330
100 Ga0105246_10024721 3300011119 Bacteria 3906
101 Ga0105246_10034938 3300011119 Bacteria 3355
102 Ga0157374_10067152 3300013296 Bacteria 3371
103 Ga0157378_10009695 3300013297 Bacteria 8388
104 Ga0157378_10017310 3300013297 Bacteria 6322
105 Ga0157378_10142786 3300013297 Bacteria 2224
106 Ga0157375_10118015 3300013308 Bacteria 2759
107 Ga0163163_10107742 3300014325 Bacteria 2813
108 Ga0163163_10141855 3300014325 Bacteria 2445
109 Ga0157380_10011862 3300014326 Bacteria 6302
110 Ga0157379_10072296 3300014968 Bacteria 3085
111 Ga0157379_10088122 3300014968 Bacteria 2783
112 Ga0207647_10022421 3300025904 Bacteria 4194
113 Ga0207645_10004335 3300025907 Bacteria 10506
114 Ga0207645_10038578 3300025907 Bacteria 3063
115 Ga0207684_10036063 3300025910 Bacteria 4198
116 Ga0207707_10095595 3300025912 Bacteria 2597
117 Ga0207662_10002970 3300025918 Bacteria 8632
118 Ga0207657_10072266 3300025919 Bacteria 2919
119 Ga0207649_10031837 3300025920 Bacteria 3138
120 Ga0207694_10040151 3300025924 Bacteria 3602
121 Ga0207650_10069026 3300025925 Bacteria 2655
122 Ga0207644_10043822 3300025931 Bacteria 3176
123 Ga0207706_10039281 3300025933 Bacteria 4195
124 Ga0207706_10112747 3300025933 Unclassified 2392
125 Ga0207686_10000208 3300025934 Bacteria 44632
126 Ga0207709_10000029 3300025935 Bacteria 333327
127 Ga0207691_10016335 3300025940 Bacteria 7047
128 Ga0207691_10045989 3300025940 Bacteria 4012
129 Ga0207689_10047014 3300025942 Bacteria 3565
130 Ga0207640_10019991 3300025981 Bacteria 3968
131 Ga0207703_10033959 3300026035 Bacteria 4046
132 Ga0207639_10045601 3300026041 Bacteria 3303
133 Ga0207708_10004678 3300026075 Bacteria 10069
134 Ga0207708_10032043 3300026075 Bacteria 3991
135 Ga0207641_10002720 3300026088 Bacteria 16134
136 Ga0207648_10006460 3300026089 Bacteria 11643
137 Ga0207648_10068881 3300026089 Bacteria 3083
138 Ga0207648_10110493 3300026089 Bacteria 2413
139 Ga0207675_100001830 3300026118 Bacteria 21318
140 Ga0207675_100003240 3300026118 Bacteria 15957
141 Ga0207675_100101564 3300026118 Bacteria 2710
142 Ga0207428_10004712 3300027907 Bacteria 12899
143 Ga0207428_10023667 3300027907 Bacteria 5161
144 Ga0268265_10008957 3300028380 Bacteria 6768
145 Ga0268265_10034928 3300028380 Unclassified 3669
146 Ga0268264_10089780 3300028381 Bacteria 2647
147 Ga0265332_10004956 3300031238 Bacteria 6188
148 Ga0307509_10000070 3300031507 Bacteria 141228
149 Ga0307509_10082766 3300031507 Bacteria 3310
150 Ga0307408_100011131 3300031548 Bacteria 5942
151 Ga0307408_100018858 3300031548 Bacteria 4638
152 Ga0307408_100131270 3300031548 Bacteria 1954
153 Ga0307508_10015430 3300031616 Bacteria 6959
154 Ga0307516_10040001 3300031730 Bacteria 4669
155 Ga0307411_10019887 3300032005 Bacteria 3890
156 Ga0373961_0000050 3300035241 Bacteria 68925
157 Ga0373924_0000745 3300035410 Bacteria 10145
158 Ga0373935_0006430 3300035692 Bacteria 7015
159 Ga0373937_0110804 3300036401 Bacteria 2553
160 Ga0436365_1404960 3300039437 Bacteria 3439
161 Ga0436365_1928925 3300039437 Bacteria 149126
162 Ga0439450_003199 3300042008 Bacteria 2680
163 Ga0451576_0239910 3300045051 Bacteria 1894
164 Ga0495629_0037890 3300046459 Bacteria 3398
165 Ga0495651_0114306 3300046462 Bacteria 1992
166 Ga0495608_0067241 3300046511 Bacteria 2344
167 Ga0495618_0020760 3300046514 Bacteria 4043
168 Ga0495630_0000624 3300046517 Bacteria 25664
169 Ga0495645_0002075 3300046543 Bacteria 13619
170 Ga0495667_0039212 3300046559 Bacteria 3151
171 Ga0495635_0045921 3300046663 Bacteria 3013
172 Ga0495658_0019640 3300046683 Bacteria 3530
173 Ga0495658_0039734 3300046683 Bacteria 2612
174 Ga0495669_0002751 3300046684 Bacteria 7216
175 Ga0495674_0018699 3300047319 Bacteria 6448
176 Ga0495684_0000140 3300047471 Bacteria 53062
177 Ga0495684_0024064 3300047471 Bacteria 4685
178 Ga0495602_0062418 3300048088 Bacteria 3233
179 Ga0496101_0144684 3300048904 Bacteria 1815
180 Ga0496104_0092096 3300048907 Bacteria 2898
181 Ga0496108_0016078 3300048911 Bacteria 6100
182 Ga0496108_0039463 3300048911 Bacteria 3935
183 Ga0496109_0006048 3300048912 Bacteria 10170
184 Ga0496110_0009987 3300048913 Bacteria 7700
185 Ga0496111_0059281 3300048914 Bacteria 2773
186 Ga0496112_0044583 3300048915 Bacteria 4346
187 Ga0496112_0090039 3300048915 Bacteria 3037
188 Ga0496114_0071200 3300048917 Bacteria 2922
189 Ga0501042_0033207 3300049578 Bacteria 3658
190 Ga0501048_0064351 3300049582 Bacteria 2594
191 Ga0501079_0065657 3300049741 Bacteria 2800
192 Ga0501081_0027365 3300049743 Bacteria 3847
193 nmdc:mga05p37_1165_c1 3300050507 Bacteria 30287
194 nmdc:mga05p37_16436_c1 3300050507 Bacteria 8916
195 nmdc:mga05p37_23303_c1 3300050507 Bacteria 7512
196 nmdc:mga05p37_23313_c1 3300050507 Bacteria 7510
197 nmdc:mga05p37_3129_c1 3300050507 Bacteria 19231
198 nmdc:mga05p37_561_c1 3300050507 Bacteria 40854
199 nmdc:mga05p37_63717_c1 3300050507 Bacteria 4536
200 nmdc:mga09592_17117_c1 3300050508 Bacteria 5935
201 nmdc:mga09592_91313_c1 3300050508 Bacteria 2602
202 nmdc:mga0qj67_6253_c1 3300050509 Bacteria 8738
203 nmdc:mga06r32_65380_c1 3300050510 Bacteria 3508
204 nmdc:mga08y16_23314_c1 3300050511 Bacteria 6537
205 nmdc:mga08y16_257900_c1 3300050511 Bacteria 1801
206 nmdc:mga08y16_3484_c1 3300050511 Bacteria 16326
207 nmdc:mga08y16_5471_c1 3300050511 Bacteria 13281
208 nmdc:mga08y16_717_c1 3300050511 Bacteria 31525
209 nmdc:mga0n895_14108_c1 3300050512 Bacteria 7243
210 nmdc:mga0n895_46556_c1 3300050512 Bacteria 4238
211 nmdc:mga0n895_69_c1 3300050512 Bacteria 59717
212 nmdc:mga0n895_81503_c1 3300050512 Bacteria 3224
213 nmdc:mga0n895_86545_c1 3300050512 Bacteria 3130
214 nmdc:mga0rr50_482_c1 3300050513 Bacteria 21145
215 nmdc:mga0rr50_5920_c1 3300050513 Bacteria 7359
216 nmdc:mga08x19_88648_c1 3300050514 Bacteria 2040
217 nmdc:mga08x19_951_c1 3300050514 Bacteria 18187
218 nmdc:mga0a205_18657_c1 3300050515 Bacteria 6528
219 nmdc:mga0a205_7183_c1 3300050515 Bacteria 10067
220 nmdc:mga0a205_8832_c1 3300050515 Bacteria 9178
221 Ga0495601_0015158 3300053077 Bacteria 4657
222 Ga0495595_0017606 3300053084 Bacteria 3076
223 Ga0500578_0039642 3300053086 Bacteria 3027
224 Ga0500566_0000338 3300053094 Bacteria 25497
225 Ga0500566_0022660 3300053094 Bacteria 3689
226 Ga0500640_000345 3300053095 Bacteria 10821
227 Ga0500554_000235 3300053102 Bacteria 11882
228 Ga0500572_018139 3300053111 Bacteria 1818
229 Ga0500597_009115 3300053120 Bacteria 3474
230 Ga0500614_000327 3300053123 Bacteria 12291
231 Ga0500614_004639 3300053123 Bacteria 2895
232 Ga0500559_0007227 3300053136 Bacteria 4938
233 Ga0500603_002936 3300053150 Bacteria 3692
234 Ga0501084_0088506 3300054114 Bacteria 2600
235 Ga0590077_000859 3300059426 Bacteria 7791
236 Ga0530510_0015716 3300061734 Bacteria 5350
237 Ga0530510_0050922 3300061734 Bacteria 2992
238 Ga0307516_10049075
239 Ga0065712_10008387
240 Ga0065715_10007341
241 Ga0065715_10016385
242 Ga0065715_10095415
243 Ga0065707_10001541
244 Ga0065707_10096484
245 Ga0070690_100004751
246 Ga0070670_100050405
247 Ga0070680_100082833
248 Ga0070682_100093229
249 Ga0070691_10010630
250 Ga0070668_100136579
251 Ga0070669_100093464
252 Ga0070675_100048447
253 Ga0070671_100035684
254 Ga0070673_100031599
255 Ga0070688_100013994
256 Ga0070667_100116318
257 Ga0070701_10002977
258 Ga0070705_100087680
259 Ga0070700_100057059
260 Ga0070694_100001660
261 Ga0070708_100037856
262 Ga0070662_100018673
263 Ga0068867_100003762
264 Ga0070699_100000525
265 Ga0070699_100070916
266 Ga0070684_100004472
267 Ga0070697_100033196
268 Ga0068853_100065201
269 Ga0070672_100035377
270 Ga0070686_100019975
271 Ga0070693_100002801
272 Ga0070665_100002246
273 Ga0070664_100000222
274 Ga0068852_100110701
275 Ga0068859_100043406
276 Ga0068859_100107450
277 Ga0068863_100006804
278 Ga0068858_100076395
279 Ga0068860_100058348
280 Ga0068860_100063012
281 Ga0068860_100141948
282 Ga0068862_100014697
283 Ga0068862_100038051
284 Ga0081455_10009645
285 Ga0068871_100003400
286 Ga0075428_100002558
287 Ga0075428_100010865
288 Ga0075430_100003971
289 Ga0075431_100002364
290 Ga0075431_100007090
291 Ga0075431_100013080
292 Ga0075433_10007488
293 Ga0075433_10013432
294 Ga0075433_10045123
295 Ga0075433_10081029
296 Ga0075434_100097069
297 Ga0075434_100108927
298 Ga0075429_100011259
299 Ga0075429_100016636
300 Ga0075429_100163931
301 Ga0075436_100007472
302 Ga0075436_100019107
303 Ga0075436_100039075
304 Ga0097620_100043404
305 Ga0097620_100107450
306 Ga0075435_100000383
307 Ga0075435_100000973
308 Ga0075435_100041890
309 Ga0075435_100057771
310 Ga0075435_100059205
311 Ga0099794_10027824
312 Ga0111539_10001215
313 Ga0111539_10005752
314 Ga0111539_10017186
315 Ga0111539_10019185
316 Ga0105245_10148783
317 Ga0114129_10000532
318 Ga0114129_10000778
319 Ga0114129_10002480
320 Ga0114129_10011175
321 Ga0114129_10013238
322 Ga0114129_10021497
323 Ga0114129_10022081
324 Ga0114129_10041370
325 Ga0114129_10266771
326 Ga0114129_10292608
327 Ga0105243_10001313
328 Ga0105243_10019178
329 Ga0105243_10041184
330 Ga0105242_10000997
331 Ga0105248_10002465
332 Ga0105238_10003913
333 Ga0105238_10103878
334 Ga0105249_10004089
335 Ga0105249_10019530
336 Ga0105239_10092926
337 Ga0105246_10024721
338 Ga0105246_10034938
339 Ga0157374_10067152
340 Ga0157378_10009695
341 Ga0157378_10017310
342 Ga0157378_10142786
343 Ga0157375_10118015
344 Ga0163163_10107742
345 Ga0163163_10141855
346 Ga0157380_10011862
347 Ga0157379_10072296
348 Ga0157379_10088122
349 Ga0207647_10022421
350 Ga0207645_10004335
351 Ga0207645_10038578
352 Ga0207684_10036063
353 Ga0207707_10095595
354 Ga0207662_10002970
355 Ga0207657_10072266
356 Ga0207649_10031837
357 Ga0207694_10040151
358 Ga0207650_10069026
359 Ga0207644_10043822
360 Ga0207706_10039281
361 Ga0207706_10112747
362 Ga0207686_10000208
363 Ga0207709_10000029
364 Ga0207691_10016335
365 Ga0207691_10045989
366 Ga0207689_10047014
367 Ga0207640_10019991
368 Ga0207703_10033959
369 Ga0207639_10045601
370 Ga0207708_10004678
371 Ga0207708_10032043
372 Ga0207641_10002720
373 Ga0207648_10006460
374 Ga0207648_10068881
375 Ga0207648_10110493
376 Ga0207675_100001830
377 Ga0207675_100003240
378 Ga0207675_100101564
379 Ga0207428_10004712
380 Ga0207428_10023667
381 Ga0268265_10008957
382 Ga0268265_10034928
383 Ga0268264_10089780
384 Ga0265332_10004956
385 Ga0307509_10000070
386 Ga0307509_10082766
387 Ga0307408_100011131
388 Ga0307408_100018858
389 Ga0307408_100131270
390 Ga0307508_10015430
391 Ga0307516_10040001
392 Ga0307411_10019887
393 Ga0373961_0000050
394 Ga0373924_0000745
395 Ga0373935_0006430
396 Ga0373937_0110804
397 Ga0436365_1404960
398 Ga0436365_1928925
399 Ga0439450_003199
400 Ga0451576_0239910
401 Ga0495629_0037890
402 Ga0495651_0114306
403 Ga0495608_0067241
404 Ga0495618_0020760
405 Ga0495630_0000624
406 Ga0495645_0002075
407 Ga0495667_0039212
408 Ga0495635_0045921
409 Ga0495658_0019640
410 Ga0495658_0039734
411 Ga0495669_0002751
412 Ga0495674_0018699
413 Ga0495684_0000140
414 Ga0495684_0024064
415 Ga0495602_0062418
416 Ga0496101_0144684
417 Ga0496104_0092096
418 Ga0496108_0016078
419 Ga0496108_0039463
420 Ga0496109_0006048
421 Ga0496110_0009987
422 Ga0496111_0059281
423 Ga0496112_0044583
424 Ga0496112_0090039
425 Ga0496114_0071200
426 Ga0501042_0033207
427 Ga0501048_0064351
428 Ga0501079_0065657
429 Ga0501081_0027365
430 nmdc:mga05p37_1165_c1
431 nmdc:mga05p37_16436_c1
432 nmdc:mga05p37_23303_c1
433 nmdc:mga05p37_23313_c1
434 nmdc:mga05p37_3129_c1
435 nmdc:mga05p37_561_c1
436 nmdc:mga05p37_63717_c1
437 nmdc:mga09592_17117_c1
438 nmdc:mga09592_91313_c1
439 nmdc:mga0qj67_6253_c1
440 nmdc:mga06r32_65380_c1
441 nmdc:mga08y16_23314_c1
442 nmdc:mga08y16_257900_c1
443 nmdc:mga08y16_3484_c1
444 nmdc:mga08y16_5471_c1
445 nmdc:mga08y16_717_c1
446 nmdc:mga0n895_14108_c1
447 nmdc:mga0n895_46556_c1
448 nmdc:mga0n895_69_c1
449 nmdc:mga0n895_81503_c1
450 nmdc:mga0n895_86545_c1
451 nmdc:mga0rr50_482_c1
452 nmdc:mga0rr50_5920_c1
453 nmdc:mga08x19_88648_c1
454 nmdc:mga08x19_951_c1
455 nmdc:mga0a205_18657_c1
456 nmdc:mga0a205_7183_c1
457 nmdc:mga0a205_8832_c1
458 Ga0495601_0015158
459 Ga0495595_0017606
460 Ga0500578_0039642
461 Ga0500566_0000338
462 Ga0500566_0022660
463 Ga0500640_000345
464 Ga0500554_000235
465 Ga0500572_018139
466 Ga0500597_009115
467 Ga0500614_000327
468 Ga0500614_004639
469 Ga0500559_0007227
470 Ga0500603_002936
471 Ga0501084_0088506
472 Ga0590077_000859
473 Ga0530510_0015716
474 Ga0530510_0050922

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

30

142

0.98

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

250

408

0.97

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

146

238

0.93

PF21343

ACAD9-ACADV_C

ACAD9/ACADV, C-terminal domain

435

528

0.93

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

267

397

0.9

PF22924

ACOX_C_alpha1

Acyl-CoA oxidase, C-alpha1 domain

257

402

0.84

PF21263

Acyl-CoA-dh_C

Acyl-CoA dehydrogenase, C-terminal domain

429

525

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3owa-assembly2.cif.gz_D crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis 0.9665 12 583
3owa-assembly1.cif.gz_A crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis 0.9654 12 583
2z1q-assembly1.cif.gz_A crystal structure of acyl coa dehydrogenase 0.957 6 583
2z1q-assembly1.cif.gz_B crystal structure of acyl coa dehydrogenase 0.9538 6 581
3owa-assembly1.cif.gz_B crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis 0.9536 12 583
ID Description Score Start End Superfamily
3owaB01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9582 14 145 1.10.540.10
2z1qB02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.954 148 251 2.40.110.10
2z1qA03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9443 253 419 1.20.140.10
3owaC03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9335 253 419 1.20.140.10
2z1qA03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9334 253 419 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A661VC80-F1-model_v4 Acyl-CoA dehydrogenase 0.967 38 312 GO:0003995
GO:0050660
AF-A0A7Y8LR78-F1-model_v4 Acyl-CoA dehydrogenase family protein 0.9635 7 581 GO:0003995
GO:0050660
AF-G7WAV0-F1-model_v4 Acyl-CoA dehydrogenase 0.9628 10 581 GO:0003995
GO:0050660
AF-A0A351JZ53-F1-model_v4 Acyl-CoA dehydrogenase 0.9613 38 147 GO:0003995
GO:0050660
AF-A0A4U3BWN6-F1-model_v4 deleted 0.9595 1 380

Map